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Sava Sakadzic, Ph.D.

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Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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  1. Anzabi M, Li B, Wang H, Kura S, Sakadžic S, Boas D, Østergaard L, Ayata C. Optical coherence tomography of arteriolar diameter and capillary perfusion during spreading depolarizations. J Cereb Blood Flow Metab. 2021 Feb 16; 271678X21994013. PMID: 33593116.
    Citations:    Fields:    
  2. Bordoni L, Li B, Kura S, Boas DA, Sakadžic S, Østergaard L, Frische S, Gutiérrez-Jiménez E. Quantification of Capillary Perfusion in an Animal Model of Acute Intracranial Hypertension. J Neurotrauma. 2021 02 15; 38(4):446-454. PMID: 32998634.
    Citations:    Fields:    
  3. Chung DY, Oka F, Jin G, Harriott A, Kura S, Aykan SA, Qin T, Edmiston WJ, Lee H, Yaseen MA, Sakadžic S, Boas DA, Whalen MJ, Ayata C. Subarachnoid hemorrhage leads to early and persistent functional connectivity and behavioral changes in mice. J Cereb Blood Flow Metab. 2021 May; 41(5):975-985. PMID: 32936728.
    Citations:    Fields:    
  4. Fischer P, Sugimoto K, Chung DY, Tamim I, Morais A, Takizawa T, Qin T, Gomez CA, Schlunk F, Endres M, Yaseen MA, Sakadzic S, Ayata C. Rapid hematoma growth triggers spreading depolarizations in experimental intracortical hemorrhage. J Cereb Blood Flow Metab. 2020 Sep 16; 271678X20951993. PMID: 32936730.
    Citations:    Fields:    
  5. Robinson M, Boas D, Sakadžic S, Franceschini MA, Carp S. Interferometric diffuse correlation spectroscopy improves measurements at long source-detector separation and low photon count rate. J Biomed Opt. 2020 09; 25(9). PMID: 33000571.
    Citations:    Fields:    
  6. Sætra MJ, Solbrå AV, Devor A, Sakadžic S, Dale AM, Einevoll GT. Spatially resolved estimation of metabolic oxygen consumption from optical measurements in cortex. Neurophotonics. 2020 Jul; 7(3):035005. PMID: 32855994.
  7. Sugimoto K, Chung DY, Böhm M, Fischer P, Takizawa T, Aykan SA, Qin T, Yanagisawa T, Harriott A, Oka F, Yaseen MA, Sakadžic S, Ayata C. Peri-Infarct Hot-Zones Have Higher Susceptibility to Optogenetic Functional Activation-Induced Spreading Depolarizations. Stroke. 2020 08; 51(8):2526-2535. PMID: 32640946.
    Citations:    Fields:    Translation:Animals
  8. Sencan I, Esipova T, Kiliç K, Li B, Desjardins M, Yaseen MA, Wang H, Porter JE, Kura S, Fu B, Secomb TW, Boas DA, Vinogradov SA, Devor A, Sakadžic S. Optical measurement of microvascular oxygenation and blood flow responses in awake mouse cortex during functional activation. J Cereb Blood Flow Metab. 2020 Jun 09; 271678X20928011. PMID: 32515672.
    Citations: 2     Fields:    
  9. Celaya-Alcala JT, Lee GV, Smith AF, Li B, Sakadžic S, Boas DA, Secomb TW. Simulation of oxygen transport and estimation of tissue perfusion in extensive microvascular networks: Application to cerebral cortex. J Cereb Blood Flow Metab. 2021 Mar; 41(3):656-669. PMID: 32501155.
    Citations: 1     Fields:    
  10. Esposito E, Li W, T Mandeville E, Park JH, Sencan I, Guo S, Shi J, Lan J, Lee J, Hayakawa K, Sakadžic S, Ji X, Lo EH. Potential circadian effects on translational failure for neuroprotection. Nature. 2020 06; 582(7812):395-398. PMID: 32494010.
    Citations: 4     Fields:    Translation:HumansAnimalsCells
  11. Robinson MB, Carp SA, Peruch A, Boas DA, Franceschini MA, Sakadžic S. Characterization of continuous wave ultrasound for acousto-optic modulated diffuse correlation spectroscopy (AOM-DCS). Biomed Opt Express. 2020 Jun 01; 11(6):3071-3090. PMID: 32637242.
    Citations: 2     
  12. Ahn SJ, Ruiz-Uribe NE, Li B, Porter J, Sakadzic S, Schaffer CB. Label-free assessment of hemodynamics in individual cortical brain vessels using third harmonic generation microscopy. Biomed Opt Express. 2020 May 01; 11(5):2665-2678. PMID: 32499951.
  13. Erdener SE, Tang J, Kiliç K, Postnov D, Giblin JT, Kura S, Chen IA, Vayisoglu T, Sakadžic S, Schaffer CB, Boas DA. Dynamic capillary stalls in reperfused ischemic penumbra contribute to injury: A hyperacute role for neutrophils in persistent traffic jams. J Cereb Blood Flow Metab. 2021 Feb; 41(2):236-252. PMID: 32237951.
    Citations: 3     Fields:    
  14. Plunkett S, El Khatib M, Sencan I, Porter JE, Kumar ATN, Collins JE, SakadŽic S, Vinogradov SA. In vivo deep-tissue microscopy with UCNP/Janus-dendrimers as imaging probes: resolution at depth and feasibility of ratiometric sensing. Nanoscale. 2020 Jan 28; 12(4):2657-2672. PMID: 31939953.
    Citations: 1     Fields:    Translation:HumansAnimalsCells
  15. Cheng X, Li Y, Mertz J, Sakadžic S, Devor A, Boas DA, Tian L. Development of a beam propagation method to simulate the point spread function degradation in scattering media. Opt Lett. 2019 Oct 15; 44(20):4989-4992. PMID: 31613246.
    Citations: 2     Fields:    
  16. Sadegh S, Yang MH, Ferri CGL, Thunemann M, Saisan PA, Wei Z, Rodriguez EA, Adams SR, Kiliç K, Boas DA, Sakadžic S, Devor A, Fainman Y. Efficient non-degenerate two-photon excitation for fluorescence microscopy. Opt Express. 2019 Sep 30; 27(20):28022-28035. PMID: 31684560.
    Citations: 2     Fields:    
  17. Li B, Lu X, Moeini M, Sakadžic S, Thorin E, Lesage F. Atherosclerosis is associated with a decrease in cerebral microvascular blood flow and tissue oxygenation. PLoS One. 2019; 14(8):e0221547. PMID: 31469849.
    Citations: 4     Fields:    Translation:AnimalsCells
  18. Shvedova M, Litvak MM, Roberts JD, Fukumura D, Suzuki T, Sencan I, Li G, Reventun P, Buys ES, Kim HH, Sakadžic S, Ayata C, Huang PL, Feil R, Atochin DN. cGMP-dependent protein kinase I in vascular smooth muscle cells improves ischemic stroke outcome in mice. J Cereb Blood Flow Metab. 2019 12; 39(12):2379-2391. PMID: 31423931.
    Citations:    Fields:    Translation:AnimalsCells
  19. Secomb TW, Bullock KV, Boas DA, Sakadžic S. The mass transfer coefficient for oxygen transport from blood to tissue in cerebral cortex. J Cereb Blood Flow Metab. 2020 08; 40(8):1634-1646. PMID: 31423930.
    Citations:    Fields:    Translation:HumansAnimalsCells
  20. Li B, Esipova TV, Sencan I, Kiliç K, Fu B, Desjardins M, Moeini M, Kura S, Yaseen MA, Lesage F, Østergaard L, Devor A, Boas DA, Vinogradov SA, Sakadžic S. More homogeneous capillary flow and oxygenation in deeper cortical layers correlate with increased oxygen extraction. Elife. 2019 07 15; 8. PMID: 31305237.
    Citations: 12     Fields:    Translation:Animals
  21. Xie H, Chung DY, Kura S, Sugimoto K, Aykan SA, Wu Y, Sakadžic S, Yaseen MA, Boas DA, Ayata C. Differential effects of anesthetics on resting state functional connectivity in the mouse. J Cereb Blood Flow Metab. 2020 04; 40(4):875-884. PMID: 31092086.
    Citations: 2     Fields:    Translation:Animals
  22. Böhm M, Chung DY, Gómez CA, Qin T, Takizawa T, Sadeghian H, Sugimoto K, Sakadžic S, Yaseen MA, Ayata C. Neurovascular coupling during optogenetic functional activation: Local and remote stimulus-response characteristics, and uncoupling by spreading depression. J Cereb Blood Flow Metab. 2020 04; 40(4):808-822. PMID: 31063009.
    Citations: 4     Fields:    Translation:Animals
  23. Li B, Ohtomo R, Thunemann M, Adams SR, Yang J, Fu B, Yaseen MA, Ran C, Polimeni JR, Boas DA, Devor A, Lo EH, Arai K, Sakadžic S. Two-photon microscopic imaging of capillary red blood cell flux in mouse brain reveals vulnerability of cerebral white matter to hypoperfusion. J Cereb Blood Flow Metab. 2020 03; 40(3):501-512. PMID: 30829101.
    Citations: 5     Fields:    Translation:AnimalsCells
  24. Chung DY, Sadeghian H, Qin T, Lule S, Lee H, Karakaya F, Goins S, Oka F, Yaseen MA, Houben T, Tolner EA, van den Maagdenberg AMJM, Whalen MJ, Sakadžic S, Ayata C. Determinants of Optogenetic Cortical Spreading Depolarizations. Cereb Cortex. 2019 03 01; 29(3):1150-1161. PMID: 29425263.
    Citations: 13     Fields:    Translation:AnimalsCells
  25. Cheng X, Berman AJL, Polimeni JR, Buxton RB, Gagnon L, Devor A, Sakadžic S, Boas DA. Dependence of the MR signal on the magnetic susceptibility of blood studied with models based on real microvascular networks. Magn Reson Med. 2019 06; 81(6):3865-3874. PMID: 30659643.
    Citations: 1     Fields:    Translation:Animals
  26. Gómez CA, Fu B, Sakadžic S, Yaseen MA. Cerebral metabolism in a mouse model of Alzheimer's disease characterized by two-photon fluorescence lifetime microscopy of intrinsic NADH. Neurophotonics. 2018 Oct; 5(4):045008. PMID: 30603656.
    Citations: 2     
  27. Desjardins M, Kiliç K, Thunemann M, Mateo C, Holland D, Ferri CGL, Cremonesi JA, Li B, Cheng Q, Weldy KL, Saisan PA, Kleinfeld D, Komiyama T, Liu TT, Bussell R, Wong EC, Scadeng M, Dunn AK, Boas DA, Sakadžic S, Mandeville JB, Buxton RB, Dale AM, Devor A. Awake Mouse Imaging: From Two-Photon Microscopy to Blood Oxygen Level-Dependent Functional Magnetic Resonance Imaging. Biol Psychiatry Cogn Neurosci Neuroimaging. 2019 06; 4(6):533-542. PMID: 30691968.
    Citations: 9     Fields:    Translation:Animals
  28. Damseh R, Pouliot P, Gagnon L, Sakadzic S, Boas D, Cheriet F, Lesage F. Automatic Graph-Based Modeling of Brain Microvessels Captured With Two-Photon Microscopy. IEEE J Biomed Health Inform. 2019 11; 23(6):2551-2562. PMID: 30507542.
    Citations: 2     Fields:    Translation:Animals
  29. Sencan I, Esipova TV, Yaseen MA, Fu B, Boas DA, Vinogradov SA, Shahidi M, Sakadžic S. Two-photon phosphorescence lifetime microscopy of retinal capillary plexus oxygenation in mice. J Biomed Opt. 2018 12; 23(12):1-9. PMID: 30516039.
    Citations: 2     Fields:    Translation:Animals
  30. Chung DY, Sugimoto K, Fischer P, Böhm M, Takizawa T, Sadeghian H, Morais A, Harriott A, Oka F, Qin T, Henninger N, Yaseen MA, Sakadžic S, Ayata C. Real-time non-invasive in vivo visible light detection of cortical spreading depolarizations in mice. J Neurosci Methods. 2018 11 01; 309:143-146. PMID: 30194041.
    Citations: 8     Fields:    Translation:Animals
  31. Kisler K, Lazic D, Sweeney MD, Plunkett S, El Khatib M, Vinogradov SA, Boas DA, Sakadži S, Zlokovic BV. In vivo imaging and analysis of cerebrovascular hemodynamic responses and tissue oxygenation in the mouse brain. Nat Protoc. 2018 06; 13(6):1377-1402. PMID: 29844521.
    Citations: 11     Fields:    Translation:Animals
  32. Gómez CA, Sutin J, Wu W, Fu B, Uhlirova H, Devor A, Boas DA, Sakadžic S, Yaseen MA. Phasor analysis of NADH FLIM identifies pharmacological disruptions to mitochondrial metabolic processes in the rodent cerebral cortex. PLoS One. 2018; 13(3):e0194578. PMID: 29561904.
    Citations: 5     Fields:    Translation:HumansAnimalsCells
  33. Kura S, Xie H, Fu B, Ayata C, Boas DA, Sakadžic S. Intrinsic optical signal imaging of the blood volume changes is sufficient for mapping the resting state functional connectivity in the rodent cortex. J Neural Eng. 2018 06; 15(3):035003. PMID: 29451130.
    Citations: 7     Fields:    Translation:Animals
  34. Wang H, Magnain C, Sakadžic S, Fischl B, Boas DA. Characterizing the optical properties of human brain tissue with high numerical aperture optical coherence tomography. Biomed Opt Express. 2017 Dec 01; 8(12):5617-5636. PMID: 29296492.
    Citations: 12     
  35. Tang J, Erdener SE, Li B, Fu B, Sakadzic S, Carp SA, Lee J, Boas DA. Shear-induced diffusion of red blood cells measured with dynamic light scattering-optical coherence tomography. J Biophotonics. 2018 02; 11(2). PMID: 28700129.
    Citations: 11     Fields:    Translation:AnimalsCells
  36. Kilic K, Uhlirova H, Tian P, Saisan PA, Yaseen MA, Lee J, Vinogradov SA, Boas DA, Sakadzic S, Devor A. Neurobiological Basis of Migraine. Dalkara T, Moskowitz MA editors. Tools for High-Resolution in vivo Imaging of Cellular and Molecular Mechanisms in Cortical Spreading Depression and Spreading Depolarization. 2017; 307-320. View Publication.
  37. Rasmussen PM, Smith AF, Sakadžic S, Boas DA, Pries AR, Secomb TW, Østergaard L. Model-based inference from microvascular measurements: Combining experimental measurements and model predictions using a Bayesian probabilistic approach. Microcirculation. 2017 05; 24(4). PMID: 27987383.
    Citations: 4     Fields:    Translation:Animals
  38. Yaseen MA, Sutin J, Wu W, Fu B, Uhlirova H, Devor A, Boas DA, Sakadžic S. Fluorescence lifetime microscopy of NADH distinguishes alterations in cerebral metabolism in vivo. Biomed Opt Express. 2017 May 01; 8(5):2368-2385. PMID: 28663879.
    Citations: 20     
  39. Sakadžic S, Boas DA, Carp S. Theoretical model of blood flow measurement by diffuse correlation spectroscopy. J Biomed Opt. 2017 02 01; 22(2):27006. PMID: 28241276.
    Citations: 7     Fields:    Translation:Humans
  40. Kisler K, Nelson AR, Rege SV, Ramanathan A, Wang Y, Ahuja A, Lazic D, Tsai PS, Zhao Z, Zhou Y, Boas DA, Sakadžic S, Zlokovic BV. Pericyte degeneration leads to neurovascular uncoupling and limits oxygen supply to brain. Nat Neurosci. 2017 Mar; 20(3):406-416. PMID: 28135240.
    Citations: 112     Fields:    Translation:AnimalsCells
  41. Li B, Wang H, Fu B, Wang R, Sakadžic S, Boas DA. Impact of temporal resolution on estimating capillary RBC-flux with optical coherence tomography. J Biomed Opt. 2017 01 01; 22(1):16014. PMID: 28125157.
    Citations: 5     Fields:    Translation:AnimalsCells
  42. Xu K, Boas DA, Sakadžic S, LaManna JC. Brain Tissue PO2 Measurement During Normoxia and Hypoxia Using Two-Photon Phosphorescence Lifetime Microscopy. Adv Exp Med Biol. 2017; 977:149-153. PMID: 28685439.
    Citations: 1     Fields:    Translation:Animals
  43. Pouliot P, Gagnon L, Lam T, Avti PK, Bowen C, Desjardins M, Kakkar AK, Thorin E, Sakadzic S, Boas DA, Lesage F. Magnetic resonance fingerprinting based on realistic vasculature in mice. Neuroimage. 2017 04 01; 149:436-445. PMID: 28043909.
    Citations: 2     Fields:    Translation:Animals
  44. Sakadžic S, Yaseen MA, Jaswal R, Roussakis E, Dale AM, Buxton RB, Vinogradov SA, Boas DA, Devor A. Two-photon microscopy measurement of cerebral metabolic rate of oxygen using periarteriolar oxygen concentration gradients. Neurophotonics. 2016 Oct; 3(4):045005. PMID: 27774493.
    Citations: 14     
  45. Gagnon L, Sakadžic S, Lesage F, Pouliot P, Dale AM, Devor A, Buxton RB, Boas DA. Validation and optimization of hypercapnic-calibrated fMRI from oxygen-sensitive two-photon microscopy. Philos Trans R Soc Lond B Biol Sci. 2016 10 05; 371(1705). PMID: 27574311.
    Citations: 9     Fields:    Translation:Animals
  46. Uhlirova H, Kiliç K, Tian P, Sakadžic S, Gagnon L, Thunemann M, Desjardins M, Saisan PA, Nizar K, Yaseen MA, Hagler DJ, Vandenberghe M, Djurovic S, Andreassen OA, Silva GA, Masliah E, Kleinfeld D, Vinogradov S, Buxton RB, Einevoll GT, Boas DA, Dale AM, Devor A. The roadmap for estimation of cell-type-specific neuronal activity from non-invasive measurements. Philos Trans R Soc Lond B Biol Sci. 2016 10 05; 371(1705). PMID: 27574309.
    Citations: 16     Fields:    Translation:HumansAnimalsCells
  47. Goergen CJ, Chen HH, Sakadžic S, Srinivasan VJ, Sosnovik DE. Microstructural characterization of myocardial infarction with optical coherence tractography and two-photon microscopy. Physiol Rep. 2016 09; 4(18). PMID: 27650248.
    Citations: 13     Fields:    Translation:HumansAnimalsCells
  48. Gagnon L, Smith AF, Boas DA, Devor A, Secomb TW, Sakadžic S. Modeling of Cerebral Oxygen Transport Based on In vivo Microscopic Imaging of Microvascular Network Structure, Blood Flow, and Oxygenation. Front Comput Neurosci. 2016; 10:82. PMID: 27630556.
    Citations: 19     
  49. Boas DA, Sakadžic S, Selb J, Farzam P, Franceschini MA, Carp SA. Establishing the diffuse correlation spectroscopy signal relationship with blood flow. Neurophotonics. 2016 Jul; 3(3):031412. PMID: 27335889.
    Citations: 45     
  50. Uhlirova H, Kiliç K, Tian P, Thunemann M, Desjardins M, Saisan PA, Sakadžic S, Ness TV, Mateo C, Cheng Q, Weldy KL, Razoux F, Vandenberghe M, Cremonesi JA, Ferri CG, Nizar K, Sridhar VB, Steed TC, Abashin M, Fainman Y, Masliah E, Djurovic S, Andreassen OA, Silva GA, Boas DA, Kleinfeld D, Buxton RB, Einevoll GT, Dale AM, Devor A. Cell type specificity of neurovascular coupling in cerebral cortex. Elife. 2016 05 31; 5. PMID: 27244241.
    Citations: 56     Fields:    Translation:AnimalsCells
  51. Wang H, Akkin T, Magnain C, Wang R, Dubb J, Kostis WJ, Yaseen MA, Cramer A, Sakadžic S, Boas D. Polarization sensitive optical coherence microscopy for brain imaging. Opt Lett. 2016 May 15; 41(10):2213-6. PMID: 27176965.
    Citations: 19     Fields:    Translation:Animals
  52. Magnain C, Wang H, Sakadžic S, Fischl B, Boas DA. En face speckle reduction in optical coherence microscopy by frequency compounding. Opt Lett. 2016 May 01; 41(9):1925-8. PMID: 27128040.
    Citations: 3     Fields:    
  53. Gutiérrez-Jiménez E, Cai C, Mikkelsen IK, Rasmussen PM, Angleys H, Merrild M, Mouridsen K, Jespersen SN, Lee J, Iversen NK, Sakadzic S, Østergaard L. Effect of electrical forepaw stimulation on capillary transit-time heterogeneity (CTH). J Cereb Blood Flow Metab. 2016 12; 36(12):2072-2086. PMID: 26858243.
    Citations: 20     Fields:    Translation:Animals
  54. Yaseen MA, Srinivasan VJ, Gorczynska I, Fujimoto JG, Boas DA, Sakadžic S. Multimodal optical imaging system for in vivo investigation of cerebral oxygen delivery and energy metabolism. Biomed Opt Express. 2015 Dec 01; 6(12):4994-5007. PMID: 26713212.
    Citations: 18     
  55. Hayakawa K, Pham LD, Seo JH, Miyamoto N, Maki T, Terasaki Y, Sakadžic S, Boas D, van Leyen K, Waeber C, Kim KW, Arai K, Lo EH. CD200 restrains macrophage attack on oligodendrocyte precursors via toll-like receptor 4 downregulation. J Cereb Blood Flow Metab. 2016 Apr; 36(4):781-93. PMID: 26661156.
    Citations: 17     Fields:    Translation:AnimalsCells
  56. Sakadžic S. At long last, PAT hats for the lab rats. J Cereb Blood Flow Metab. 2015 Aug; 35(8):1223. PMID: 26082018.
    Citations: 1     Fields:    Translation:Animals
  57. Sakadžic S, Lee J, Boas DA, Ayata C. High-resolution in vivo optical imaging of stroke injury and repair. Brain Res. 2015 Oct 14; 1623:174-92. PMID: 25960347.
    Citations: 12     Fields:    Translation:Animals
  58. Gagnon L, Sakadžic S, Lesage F, Mandeville ET, Fang Q, Yaseen MA, Boas DA. Multimodal reconstruction of microvascular-flow distributions using combined two-photon microscopy and Doppler optical coherence tomography. Neurophotonics. 2015 Jan; 2(1):015008. PMID: 26157987.
    Citations: 11     
  59. von Bornstädt D, Houben T, Seidel JL, Zheng Y, Dilekoz E, Qin T, Sandow N, Kura S, Eikermann-Haerter K, Endres M, Boas DA, Moskowitz MA, Lo EH, Dreier JP, Woitzik J, Sakadžic S, Ayata C. Supply-demand mismatch transients in susceptible peri-infarct hot zones explain the origins of spreading injury depolarizations. Neuron. 2015 Mar 04; 85(5):1117-31. PMID: 25741731.
    Citations: 53     Fields:    Translation:HumansAnimals
  60. Gagnon L, Sakadžic S, Lesage F, Musacchia JJ, Lefebvre J, Fang Q, Yücel MA, Evans KC, Mandeville ET, Cohen-Adad J, Polimeni JR, Yaseen MA, Lo EH, Greve DN, Buxton RB, Dale AM, Devor A, Boas DA. Quantifying the microvascular origin of BOLD-fMRI from first principles with two-photon microscopy and an oxygen-sensitive nanoprobe. J Neurosci. 2015 Feb 25; 35(8):3663-75. PMID: 25716864.
    Citations: 71     Fields:    Translation:HumansAnimals
  61. Magnain C, Augustinack JC, Konukoglu E, Frosch MP, Sakadžic S, Varjabedian A, Garcia N, Wedeen VJ, Boas DA, Fischl B. Optical coherence tomography visualizes neurons in human entorhinal cortex. Neurophotonics. 2015 Feb 09; 2(1):015004. PMID: 25741528.
    Citations: 19     
  62. Sakadžic S, Mandeville ET, Gagnon L, Musacchia JJ, Yaseen MA, Yucel MA, Lefebvre J, Lesage F, Dale AM, Eikermann-Haerter K, Ayata C, Srinivasan VJ, Lo EH, Devor A, Boas DA. Large arteriolar component of oxygen delivery implies a safe margin of oxygen supply to cerebral tissue. Nat Commun. 2014 Dec 08; 5:5734. PMID: 25483924.
    Citations: 62     Fields:    Translation:AnimalsCells
  63. Devor A, Sakadzic S, Yaseen MA, Roussakis E, Tian P, Slovin H, Vanzetta I, Teng IC, Saisan PA, Sinks LE, Dale AM, Vinogradov SA, Boas DA. "Optical imaging of cortical circuit dynamics" in Neuromethods, vol. 85, Bruno Weber and Fritjof Helmchen, Editors. Functional Imaging of Cerebral Oxygenation with Intrinsic Optical Contrast and Phosphorescent Probes. 2014; 225-253.
  64. Srinivasan VJ, Mandeville ET, Can A, Blasi F, Climov M, Daneshmand A, Lee JH, Yu E, Radhakrishnan H, Lo EH, Sakadžic S, Eikermann-Haerter K, Ayata C. Multiparametric, longitudinal optical coherence tomography imaging reveals acute injury and chronic recovery in experimental ischemic stroke. PLoS One. 2013; 8(8):e71478. PMID: 23940761.
    Citations: 37     Fields:    Translation:Animals
  65. Nizar K, Uhlirova H, Tian P, Saisan PA, Cheng Q, Reznichenko L, Weldy KL, Steed TC, Sridhar VB, MacDonald CL, Cui J, Gratiy SL, Sakadzic S, Boas DA, Beka TI, Einevoll GT, Chen J, Masliah E, Dale AM, Silva GA, Devor A. In vivo stimulus-induced vasodilation occurs without IP3 receptor activation and may precede astrocytic calcium increase. J Neurosci. 2013 May 08; 33(19):8411-22. PMID: 23658179.
    Citations: 86     Fields:    Translation:AnimalsCells
  66. Yaseen MA, Sakadžic S, Wu W, Becker W, Kasischke KA, Boas DA. In vivo imaging of cerebral energy metabolism with two-photon fluorescence lifetime microscopy of NADH. Biomed Opt Express. 2013 Feb 01; 4(2):307-21. PMID: 23412419.
    Citations: 32     
  67. Esipova TV, Ye X, Collins JE, Sakadžic S, Mandeville ET, Murray CB, Vinogradov SA. Dendritic upconverting nanoparticles enable in vivo multiphoton microscopy with low-power continuous wave sources. Proc Natl Acad Sci U S A. 2012 Dec 18; 109(51):20826-31. PMID: 23213211.
    Citations: 13     Fields:    Translation:AnimalsCells
  68. Goergen CJ, Radhakrishnan H, Sakadžic S, Mandeville ET, Lo EH, Sosnovik DE, Srinivasan VJ. Optical coherence tractography using intrinsic contrast. Opt Lett. 2012 Sep 15; 37(18):3882-4. PMID: 23041891.
    Citations: 21     Fields:    Translation:AnimalsCells
  69. Devor A, Sakadžic S, Srinivasan VJ, Yaseen MA, Nizar K, Saisan PA, Tian P, Dale AM, Vinogradov SA, Franceschini MA, Boas DA. Frontiers in optical imaging of cerebral blood flow and metabolism. J Cereb Blood Flow Metab. 2012 Jul; 32(7):1259-76. PMID: 22252238.
    Citations: 56     Fields:    Translation:HumansAnimals
  70. Yuzawa I, Sakadžic S, Srinivasan VJ, Shin HK, Eikermann-Haerter K, Boas DA, Ayata C. Cortical spreading depression impairs oxygen delivery and metabolism in mice. J Cereb Blood Flow Metab. 2012 Feb; 32(2):376-86. PMID: 22008729.
    Citations: 21     Fields:    Translation:Animals
  71. Baraghis E, Devor A, Fang Q, Srinivasan VJ, Wu W, Lesage F, Ayata C, Kasischke KA, Boas DA, Sakadzic S. Two-photon microscopy of cortical NADH fluorescence intensity changes: correcting contamination from the hemodynamic response. J Biomed Opt. 2011 Oct; 16(10):106003. PMID: 22029350.
    Citations: 10     Fields:    Translation:Animals
  72. Devor A, Sakadzic S, Saisan PA, Yaseen MA, Roussakis E, Srinivasan VJ, Vinogradov SA, Rosen BR, Buxton RB, Dale AM, Boas DA. "Overshoot" of O2 is required to maintain baseline tissue oxygenation at locations distal to blood vessels. J Neurosci. 2011 Sep 21; 31(38):13676-81. PMID: 21940458.
    Citations: 72     Fields:    Translation:AnimalsCells
  73. Carp SA, Roche-Labarbe N, Franceschini MA, Srinivasan VJ, Sakadžic S, Boas DA. Due to intravascular multiple sequential scattering, Diffuse Correlation Spectroscopy of tissue primarily measures relative red blood cell motion within vessels. Biomed Opt Express. 2011 Jul 01; 2(7):2047-54. PMID: 21750779.
    Citations: 28     
  74. Sakadžic S, Roussakis E, Yaseen MA, Mandeville ET, Srinivasan VJ, Arai K, Ruvinskaya S, Wu W, Devor A, Lo EH, Vinogradov SA, Boas DA. J. Vis. Exp. Cerebral blood oxygenation measurement based on oxygen-dependent quenching of phosphorescence. 2011; (51).
  75. Tian P, Devor A, Sakadzic S, Dale AM, Boas DA. Monte Carlo simulation of the spatial resolution and depth sensitivity of two-dimensional optical imaging of the brain. J Biomed Opt. 2011 Jan-Feb; 16(1):016006. PMID: 21280912.
    Citations: 16     Fields:    Translation:HumansAnimals
  76. Yaseen MA, Srinivasan VJ, Sakadžic S, Radhakrishnan H, Gorczynska I, Wu W, Fujimoto JG, Boas DA. Microvascular oxygen tension and flow measurements in rodent cerebral cortex during baseline conditions and functional activation. J Cereb Blood Flow Metab. 2011 Apr; 31(4):1051-63. PMID: 21179069.
    Citations: 28     Fields:    Translation:Animals
  77. Sakadzic S, Roussakis E, Yaseen MA, Mandeville ET, Srinivasan VJ, Arai K, Ruvinskaya S, Devor A, Lo EH, Vinogradov SA, Boas DA. Two-photon high-resolution measurement of partial pressure of oxygen in cerebral vasculature and tissue. Nat Methods. 2010 Sep; 7(9):755-9. PMID: 20693997.
    Citations: 125     Fields:    Translation:Animals
  78. Srinivasan VJ, Sakadzic S, Gorczynska I, Ruvinskaya S, Wu W, Fujimoto JG, Boas DA. Quantitative cerebral blood flow with optical coherence tomography. Opt Express. 2010 Feb 01; 18(3):2477-94. PMID: 20174075.
    Citations: 103     Fields:    Translation:Animals
  79. Sukhotinsky I, Yaseen MA, Sakadzic S, Ruvinskaya S, Sims JR, Boas DA, Moskowitz MA, Ayata C. Perfusion pressure-dependent recovery of cortical spreading depression is independent of tissue oxygenation over a wide physiologic range. J Cereb Blood Flow Metab. 2010 Jun; 30(6):1168-77. PMID: 20087371.
    Citations: 15     Fields:    Translation:AnimalsCells
  80. Yaseen MA, Srinivasan VJ, Sakadzic S, Wu W, Ruvinskaya S, Vinogradov SA, Boas DA. Optical monitoring of oxygen tension in cortical microvessels with confocal microscopy. Opt Express. 2009 Dec 07; 17(25):22341-50. PMID: 20052157.
    Citations: 25     Fields:    Translation:Animals
  81. Srinivasan VJ, Sakadzic S, Gorczynska I, Ruvinskaya S, Wu W, Fujimoto JG, Boas DA. Depth-resolved microscopy of cortical hemodynamics with optical coherence tomography. Opt Lett. 2009 Oct 15; 34(20):3086-8. PMID: 19838234.
    Citations: 19     Fields:    Translation:Animals
  82. Lebedev AY, Cheprakov AV, Sakadzic S, Boas DA, Wilson DF, Vinogradov SA. Dendritic phosphorescent probes for oxygen imaging in biological systems. ACS Appl Mater Interfaces. 2009 Jun; 1(6):1292-304. PMID: 20072726.
    Citations: 68     Fields:    Translation:Animals
  83. Sakadzic S, Yuan S, Dilekoz E, Ruvinskaya S, Vinogradov SA, Ayata C, Boas DA. Simultaneous imaging of cerebral partial pressure of oxygen and blood flow during functional activation and cortical spreading depression. Appl Opt. 2009 Apr 01; 48(10):D169-77. PMID: 19340106.
    Citations: 30     Fields:    Translation:Animals
  84. Sakadzic S, Demirbas U, Mempel TR, Moore A, Ruvinskaya S, Boas DA, Sennaroglu A, Kaertner FX, Fujimoto JG. Multi-photon microscopy with a low-cost and highly efficient Cr:LiCAF laser. Opt Express. 2008 Dec 08; 16(25):20848-63. PMID: 19065223.
    Citations: 11     Fields:    
  85. Fang Q, Sakadzic S, Ruvinskaya L, Devor A, Dale AM, Boas DA. Oxygen advection and diffusion in a three- dimensional vascular anatomical network. Opt Express. 2008 Oct 27; 16(22):17530-41. PMID: 18958033.
    Citations: 36     Fields:    Translation:AnimalsCells
  86. Sakadzic S, Wang LV. Correlation transfer equation for multiply scattered light modulated by an ultrasonic pulse. J Opt Soc Am A Opt Image Sci Vis. 2007 Sep; 24(9):2797-806. PMID: 17767248.
    Citations: 2     Fields:    
  87. Kothapalli SR, Sakadzic S, Kim C, Wang LV. Imaging optically scattering objects with ultrasound-modulated optical tomography. Opt Lett. 2007 Aug 15; 32(16):2351-3. PMID: 17700782.
    Citations: 10     Fields:    
  88. Sakadzic S, Wang LV. Correlation transfer equation for ultrasound-modulated multiply scattered light. Phys Rev E Stat Nonlin Soft Matter Phys. 2006 Sep; 74(3 Pt 2):036618. PMID: 17025775.
    Citations: 2     Fields:    
  89. Zemp R, Sakadzic S, Wang LV. Stochastic explanation of speckle contrast detection in ultrasound-modulated optical tomography. Phys Rev E Stat Nonlin Soft Matter Phys. 2006 Jun; 73(6 Pt 1):061920. PMID: 16906877.
    Citations: 4     Fields:    
  90. Sakadzic S, Wang LV. Correlation transfer and diffusion of ultrasound-modulated multiply scattered light. Phys Rev Lett. 2006 Apr 28; 96(16):163902. PMID: 16712231.
    Citations: 11     Fields:    Translation:HumansAnimalsCells
  91. Sakadzic S, Wang LV. Modulation of multiply scattered coherent light by ultrasonic pulses: an analytical model. Phys Rev E Stat Nonlin Soft Matter Phys. 2005 Sep; 72(3 Pt 2):036620. PMID: 16241605.
    Citations: 9     Fields:    
  92. Sakadzic S, Wang LV. High-resolution ultrasound-modulated optical tomography in biological tissues. Opt Lett. 2004 Dec 01; 29(23):2770-2. PMID: 15605500.
    Citations: 12     Fields:    Translation:Animals
  93. Petrovic ZL, Sakadzic S, Spasojevic N, Matsui J, Makabe T. Mater. Sci. Forum. Comparison of direct numerical procedure and Monte Carlo technique to determine the charging effects in submicron structures. 2004; 453-454:9-14.
  94. Li J, Sakadzic S, Ku G, Wang LV. Transmission- and side-detection configurations in ultrasound-modulated optical tomography of thick biological tissues. Appl Opt. 2003 Jul 01; 42(19):4088-94. PMID: 12868851.
    Citations: 2     Fields:    Translation:Animals
  95. Rahman A, Hammarsten EC, Sakadzic S, Rocca JJ, Wyart JF. Physica Scripta. Identification of n=4, Delta n=0 transitions in the spectra of nickel-like cadmium ions from a capillary discharge plasma column. 2003; 67(5):414-419. View Publication.
  96. Sakadzic S, Wang LV. Ultrasonic modulation of multiply scattered coherent light: an analytical model for anisotropically scattering media. Phys Rev E Stat Nonlin Soft Matter Phys. 2002 Aug; 66(2 Pt 2):026603. PMID: 12241307.
    Citations: 5     Fields:    
  97. Raspopovic Z, Sakadzic S, Petrovic ZL, Makabe T. J. Phys. D: Appl. Phys. Diffusion of electrons in time-dependent E(t) x B(t) fields. 2000; 33(11):1298-1302. View Publication.
  98. Dyatko NA, Napartovich AP, Sakadzic S, Petrovic Z, Raspopovic Z. J. Phys. D: Appl. Phys. On the possibility of negative electron mobility in a decaying plasma. 2000; 33(4):375-380. View Publication.
  99. Raspopovic Z, Sakadzic S, Bzenic SA, Petrovic ZL. IEEE Trans. Plasma Sci. Benchmark calculations for Monte Carlo simulations of electron transport. 1999; 27(5):1241-1248.
  100. Bzenic S, Raspopovic ZM, Sakadzic S, Petrovic ZL. IEEE Trans. Plasma Sci. Relaxation of electron swarm energy distribution functions in time-varying fields. 1999; 27(1):78-79.
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Funded by the NIH National Center for Advancing Translational Sciences through its Clinical and Translational Science Awards Program, grant number UL1TR002541.