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Brett Bouma, Ph.D.

Other Positions

Real-Time Optical Frequency Domain Angiography Using Highly Parallel Graphics Processors
Summer, 06/20/11 - 08/12/11
Characterizing Microvascular Perfusion Kinetics Following Traumatic Brain Injury
Summer, 06/20/11 - 08/12/11

The research activities and funding listed below are automatically derived from NIH ExPORTER and other sources, which might result in incorrect or missing items. Faculty can login to make corrections and additions.
  1. R43CA239869 (NAMATI, EMAN) Mar 15, 2019 - Feb 29, 2020
    An integrated optical coherence tomography and tissue acquisition device for diagnosis of indeterminate biliary strictures
    Role: Co-Principal Investigator
  2. R44CA232860 (NAMATI, EMAN) Sep 19, 2018 - Mar 31, 2022
    A Computer Aided Diagnosis(CAD) Algorithm for Identification of Dysp, dklasia in Patients with Barrett Esophagus
    Role: Co-Principal Investigator
  3. R43CA232860 (NAMATI, EMAN) Sep 19, 2018 - Jun 30, 2019
    A Computer Aided Diagnosis(CAD) Algorithm for Identification of Dysplasia in Patients with Barrett Esophagus
    Role: Co-Principal Investigator
  4. R13EB023071 (BOUMA, BRETT E) Jul 1, 2016 - Jun 30, 2017
    2016 Lasers in Medicine and Biology Gordon Research Conference
    Role: Principal Investigator
  5. R01HL119065 (NADKARNI, SEEMANTINI K) May 1, 2014 - Apr 30, 2018
    Intracoronary imaging of plaque collagen in patients
    Role: Principal Investigator

Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
  1. Lee SY, Parot VJ, Bouma BE, Villiger M. Reciprocity-induced symmetry in the round-trip transmission through complex systems. APL Photonics. 2020 Oct; 5(10). PMID: 33088915.
  2. Lee H, Kim GH, Villiger M, Jang H, Bouma BE, Kim CS. Linear-in-wavenumber actively-mode-locked wavelength-swept laser. Opt Lett. 2020 Oct 01; 45(19):5327-5330. PMID: 33001885.
    Citations:    Fields:    
  3. Park EA, Tsikata E, Lee JJ, Shieh E, Braaf B, Vakoc BJ, Bouma BE, de Boer JF, Chen TC. Artifact Rates for 2D Retinal Nerve Fiber Layer Thickness Versus 3D Neuroretinal Rim Thickness Using Spectral-Domain Optical Coherence Tomography. Transl Vis Sci Technol. 2020 Sep; 9(10):10. PMID: 32974082.
  4. Otsuka K, Villiger M, Nadkarni SK, Bouma BE. Intravascular Polarimetry: Clinical Translation and Future Applications of Catheter-Based Polarization Sensitive Optical Frequency Domain Imaging. Front Cardiovasc Med. 2020; 7:146. PMID: 33005632.
  5. Otsuka K, Villiger M, van Zandvoort LJC, Neleman T, Karanasos A, Dijkstra J, van Soest G, Regar E, Nadkarni SK, Daemen J, Bouma BE. Polarimetric Signatures of Vascular Tissue Response to Drug-Eluting Stent Implantation in Patients. JACC Cardiovasc Imaging. 2020 Aug 19. PMID: 32828773.
    Citations: 1     Fields:    
  6. Braaf B, Donner S, Uribe-Patarroyo N, Bouma BE, Vakoc BJ. A Neural Network Approach to Quantify Blood Flow from Retinal OCT Intensity Time-Series Measurements. Sci Rep. 2020 06 15; 10(1):9611. PMID: 32541887.
    Citations:    Fields:    
  7. Struyvenberg M, Kahn A, Fleischer D, Swager AF, Bouma B, Ganguly E, Konda V, Lightdale C, Pleskow D, Sethi A, Smith M, Trindade A, Wallace M, Wang K, Wolfsen H, Tearney G, Curvers W, Leggett C, Bergman J. Expert Assessment on Volumetric Laser Endomicroscopy Full-Scans in Barrett's Esophagus Patients With or Without High-Grade Dysplasia or Early Cancer. Endoscopy. 2020 Jun 08. PMID: 32515006.
    Citations:    Fields:    Translation:CTClinical Trials
  8. Keahey PA, Bouma BE, Villiger M. Automated noise estimation in polarization-sensitive optical coherence tomography. Opt Lett. 2020 May 15; 45(10):2748-2751. PMID: 32412457.
    Citations:    Fields:    
  9. Ferris NG, Cannon TM, Villiger M, Bouma BE, Uribe-Patarroyo N. Forward multiple scattering dominates speckle decorrelation in whole-blood flowmetry using optical coherence tomography. Biomed Opt Express. 2020 Apr 01; 11(4):1947-1966. PMID: 32341859.
  10. Choi S, Jassim F, Tsikata E, Khoueir Z, Poon LY, Braaf B, Vakoc BJ, Bouma BE, de Boer JF, Chen TC. Artifact Rates for 2D Retinal Nerve Fiber Layer Thickness Versus 3D Retinal Nerve Fiber Layer Volume. Transl Vis Sci Technol. 2020 Feb 12; 9(3):12. PMID: 32714638.
    Citations: 1     
  11. Lee SY, Hui PC, Bouma B, Villiger M. Single-shot depth profiling by spatio-temporal encoding with a multimode fiber. Opt Express. 2020 Jan 20; 28(2):1124-1138. PMID: 32121828.
    Citations:    Fields:    
  12. Lippok N, Bouma BE, Vakoc BJ. Stable multi-megahertz circular-ranging optical coherence tomography at 1.3 µm. Biomed Opt Express. 2020 Jan 01; 11(1):174-185. PMID: 32010508.
    Citations: 2     
  13. Otsuka K, Villiger M, Nadkarni SK, Bouma BE. Intravascular Polarimetry for Tissue Characterization of Coronary Atherosclerosis. Circ Rep. 2019 Dec; 1(12):550-557. PMID: 32432174.
    Citations: 1     
  14. Xiong Q, Wang N, Liu X, Chen S, Braganza CS, Bouma BE, Liu L, Villiger M. Constrained polarization evolution simplifies depth-resolved retardation measurements with polarization-sensitive optical coherence tomography. Biomed Opt Express. 2019 Oct 01; 10(10):5207-5222. PMID: 31646042.
    Citations: 2     
  15. Otsuka K, Villiger M, Karanasos A, van Zandvoort LJC, Doradla P, Ren J, Lippok N, Daemen J, Diletti R, van Geuns RJ, Zijlstra F, van Soest G, Dijkstra J, Nadkarni SK, Regar E, Bouma BE. Intravascular Polarimetry in Patients With Coronary Artery Disease. JACC Cardiovasc Imaging. 2020 03; 13(3):790-801. PMID: 31422135.
    Citations: 3     Fields:    
  16. Van Zandvoort LJC, Otsuka K, Bouma BE, Daemen J. Intracoronary polarimetry of a honeycomb-like structure. EuroIntervention. 2019 Aug 13. PMID: 31403462.
    Citations: 2     Fields:    
  17. Deliyski DD, Shishkov M, Mehta DD, Ghasemzadeh H, Bouma B, Zañartu M, de Alarcon A, Hillman RE. Laser-Calibrated System for Transnasal Fiberoptic Laryngeal High-Speed Videoendoscopy. J Voice. 2019 Aug 02. PMID: 31383516.
    Citations:    Fields:    
  18. López-Marín A, Springeling G, Beurskens R, van Beusekom H, van der Steen AFW, Koch AD, Bouma BE, Huber R, van Soest G, Wang T. Motorized capsule for shadow-free OCT imaging and synchronous beam control. Opt Lett. 2019 Aug 01; 44(15):3641-3644. PMID: 31368932.
    Citations:    Fields:    
  19. Khoueir Z, Jassim F, Braaf B, Poon LY, Tsikata E, Chodosh J, Dohlman CH, Vakoc BJ, Bouma BE, de Boer JF, Chen TC. Three-Dimensional Optical Coherence Tomography Imaging For Glaucoma Associated With Boston Keratoprosthesis Type I and II. J Glaucoma. 2019 08; 28(8):718-726. PMID: 31169563.
    Citations: 1     Fields:    Translation:Humans
  20. Liu Y, Jassim F, Braaf B, Khoueir Z, Poon LY, Ben-David GS, Papadogeorgou G, Tsikata E, Simavli H, Que C, Lee R, Shieh E, Vakoc BJ, Bouma BE, de Boer JF, Chen TC. Diagnostic Capability of 3D Peripapillary Retinal Volume for Glaucoma Using Optical Coherence Tomography Customized Software. J Glaucoma. 2019 08; 28(8):708-717. PMID: 31180936.
    Citations: 2     Fields:    Translation:HumansCells
  21. Hariri LP, Adams DC, Applegate MB, Miller AJ, Roop BW, Villiger M, Bouma BE, Suter MJ. Distinguishing Tumor from Associated Fibrosis to Increase Diagnostic Biopsy Yield with Polarization-Sensitive Optical Coherence Tomography. Clin Cancer Res. 2019 09 01; 25(17):5242-5249. PMID: 31175092.
    Citations:    Fields:    Translation:Humans
  22. Doradla P, Otsuka K, Nadkarni A, Villiger M, Karanasos A, Zandvoort LJCV, Dijkstra J, Zijlstra F, Soest GV, Daemen J, Regar E, Bouma BE, Nadkarni SK. Biomechanical Stress Profiling of Coronary Atherosclerosis: Identifying a Multifactorial Metric to Evaluate Plaque Rupture Risk. JACC Cardiovasc Imaging. 2020 03; 13(3):804-816. PMID: 31005542.
    Citations: 2     Fields:    
  23. Lo WCY, Uribe-Patarroyo N, Hoebel K, Beaudette K, Villiger M, Nishioka NS, Vakoc BJ, Bouma BE. Balloon catheter-based radiofrequency ablation monitoring in porcine esophagus using optical coherence tomography. Biomed Opt Express. 2019 Apr 01; 10(4):2067-2089. PMID: 31086717.
    Citations: 2     
  24. Lippok N, Siddiqui M, Vakoc BJ, Bouma BE. Extended Coherence Length and Depth Ranging Using a Fourier-Domain Mode-Locked Frequency Comb and Circular Interferometric Ranging. Phys Rev Appl. 2019 Jan; 11(1). PMID: 32051835.
    Citations: 2     
  25. Nam AS, Ren J, Bouma BE, Vakoc BJ. Demonstration of Triband Multi-Focal Imaging with Optical Coherence Tomography. Appl Sci (Basel). 2018 Dec; 8(12). PMID: 31308961.
  26. Villiger M, Braaf B, Lippok N, Otsuka K, Nadkarni SK, Bouma BE. Optic axis mapping with catheter-based polarization-sensitive optical coherence tomography. Optica. 2018 Oct 20; 5(10):1329-1337. PMID: 31214632.
    Citations: 8     
  27. Verticchio Vercellin AC, Jassim F, Poon LY, Tsikata E, Braaf B, Shah S, Ben-David G, Shieh E, Lee R, Simavli H, Que CJ, Papadogeorgou G, Guo R, Vakoc BJ, Bouma BE, de Boer JF, Chen TC. Diagnostic Capability of Three-Dimensional Macular Parameters for Glaucoma Using Optical Coherence Tomography Volume Scans. Invest Ophthalmol Vis Sci. 2018 10 01; 59(12):4998-5010. PMID: 30326067.
    Citations: 4     Fields:    Translation:HumansCells
  28. Lippok N, Braaf B, Villiger M, Oh WY, Vakoc BJ, Bouma BE. Quantitative depolarization measurements for fiber-based polarization-sensitive optical frequency domain imaging of the retinal pigment epithelium. J Biophotonics. 2019 01; 12(1):e201800156. PMID: 30009506.
    Citations: 4     Fields:    Translation:Humans
  29. Villiger M, Otsuka K, Karanasos A, Doradla P, Ren J, Lippok N, Shishkov M, Daemen J, Diletti R, van Geuns RJ, Zijlstra F, Dijkstra J, van Soest G, Regar E, Nadkarni SK, Bouma BE. Repeatability Assessment of Intravascular Polarimetry in Patients. IEEE Trans Med Imaging. 2018 07; 37(7):1618-1625. PMID: 29969412.
    Citations: 4     Fields:    Translation:Humans
  30. Cuartas-Vélez C, Restrepo R, Bouma BE, Uribe-Patarroyo N. Volumetric non-local-means based speckle reduction for optical coherence tomography. Biomed Opt Express. 2018 Jul 01; 9(7):3354-3372. PMID: 29984102.
    Citations: 2     
  31. Uribe-Patarroyo N, Kassani SH, Villiger M, Bouma BE. Robust wavenumber and dispersion calibration for Fourier-domain optical coherence tomography. Opt Express. 2018 Apr 02; 26(7):9081-9094. PMID: 29715866.
    Citations: 4     Fields:    
  32. Beaudette K, Strupler M, Ren J, Bouma BE, Boudoux C. Radiometric model for coaxial single- and multimode optical emission from double-clad fiber. Appl Opt. 2018 Feb 10; 57(5):1110-1118. PMID: 29469894.
    Citations: 1     Fields:    
  33. Braaf B, Donner S, Nam AS, Bouma BE, Vakoc BJ. Complex differential variance angiography with noise-bias correction for optical coherence tomography of the retina. Biomed Opt Express. 2018 Feb 01; 9(2):486-506. PMID: 29552388.
    Citations: 5     
  34. Villiger M, Otsuka K, Karanasos A, Doradla P, Ren J, Lippok N, Shishkov M, Daemen J, Diletti R, van Geuns RJ, Zijlstra F, van Soest G, Libby P, Regar E, Nadkarni SK, Bouma BE. Coronary Plaque Microstructure and Composition Modify Optical Polarization: A New Endogenous Contrast Mechanism for Optical Frequency Domain Imaging. JACC Cardiovasc Imaging. 2018 11; 11(11):1666-1676. PMID: 29248662.
    Citations: 17     Fields:    Translation:Humans
  35. Kravez E, Villiger M, Bouma B, Yarmush M, Yakhini Z, Golberg A. Prediction of Scar Size in Rats Six Months after Burns Based on Early Post-injury Polarization-Sensitive Optical Frequency Domain Imaging. Front Physiol. 2017; 8:967. PMID: 29249978.
    Citations: 1     
  36. van Ditzhuijzen NS, Kurata M, van den Heuvel M, Sorop O, van Duin RWB, Krabbendam-Peters I, Ligthart J, Witberg K, Murawska M, Bouma B, Villiger M, Garcia-Garcia HM, Serruys PW, Zijlstra F, van Soest G, Duncker DJ, Regar E, van Beusekom HMM. Neoatherosclerosis development following bioresorbable vascular scaffold implantation in diabetic and non-diabetic swine. PLoS One. 2017; 12(9):e0183419. PMID: 28898243.
    Citations: 2     Fields:    Translation:Animals
  37. Liu X, Beaudette K, Wang X, Liu L, Bouma BE, Villiger M. Tissue-like phantoms for quantitative birefringence imaging. Biomed Opt Express. 2017 Oct 01; 8(10):4454-4465. PMID: 29082077.
    Citations: 3     
  38. Khoueir Z, Jassim F, Poon LY, Tsikata E, Ben-David GS, Liu Y, Shieh E, Lee R, Guo R, Papadogeorgou G, Braaf B, Simavli H, Que C, Vakoc BJ, Bouma BE, de Boer JF, Chen TC. Diagnostic Capability of Peripapillary Three-dimensional Retinal Nerve Fiber Layer Volume for Glaucoma Using Optical Coherence Tomography Volume Scans. Am J Ophthalmol. 2017 Oct; 182:180-193. PMID: 28807732.
    Citations: 5     Fields:    Translation:HumansCells
  39. Lippok N, Villiger M, Albanese A, Meijer EFJ, Chung K, Padera TP, Bhatia SN, Bouma BE. Depolarization signatures map gold nanorods within biological tissue. Nat Photonics. 2017; 11:583-588. PMID: 29201136.
    Citations: 8     
  40. Izatt JA, Boppart S, Bouma B, de Boer J, Drexler W, Li X, Yasuno Y. Introduction to the feature issue on the 25 year anniversary of optical coherence tomography. Biomed Opt Express. 2017 Jul 01; 8(7):3289-3291. PMID: 28717567.
  41. Golberg A, Villiger M, Felix Broelsch G, Quinn KP, Albadawi H, Khan S, Watkins MT, Georgakoudi I, Austen WG, Bei M, Bouma BE, Mihm MC, Yarmush ML. Skin regeneration with all accessory organs following ablation with irreversible electroporation. J Tissue Eng Regen Med. 2018 01; 12(1):98-113. PMID: 27976527.
    Citations: 1     Fields:    Translation:AnimalsCells
  42. Bouma BE, Villiger M, Otsuka K, Oh WY. Intravascular optical coherence tomography [Invited]. Biomed Opt Express. 2017 May 01; 8(5):2660-2686. PMID: 28663897.
    Citations: 13     
  43. Ren J, Choi H, Chung K, Bouma BE. Label-free volumetric optical imaging of intact murine brains. Sci Rep. 2017 04 12; 7:46306. PMID: 28401897.
    Citations: 2     Fields:    Translation:Animals
  44. Kassani SH, Villiger M, Uribe-Patarroyo N, Jun C, Khazaeinezhad R, Lippok N, Bouma BE. Extended bandwidth wavelength swept laser source for high resolution optical frequency domain imaging. Opt Express. 2017 Apr 03; 25(7):8255-8266. PMID: 28380940.
    Citations:    Fields:    Translation:HumansAnimals
  45. Kim TS, Park HS, Jang SJ, Song JW, Cho HS, Kim S, Bouma BE, Kim JW, Oh WY. Single cardiac cycle three-dimensional intracoronary optical coherence tomography. Biomed Opt Express. 2016 Dec 01; 7(12):4847-4858. PMID: 28018710.
    Citations: 3     
  46. Adams DC, Hariri LP, Miller AJ, Wang Y, Cho JL, Villiger M, Holz JA, Szabari MV, Hamilos DL, Scott Harris R, Griffith JW, Bouma BE, Luster AD, Medoff BD, Suter MJ. Birefringence microscopy platform for assessing airway smooth muscle structure and function in vivo. Sci Transl Med. 2016 10 05; 8(359):359ra131. PMID: 27708064.
    Citations: 22     Fields:    Translation:HumansAnimals
  47. Rico-Jimenez JJ, Campos-Delgado DU, Villiger M, Otsuka K, Bouma BE, Jo JA. Automatic classification of atherosclerotic plaques imaged with intravascular OCT. Biomed Opt Express. 2016 Oct 01; 7(10):4069-4085. PMID: 27867716.
    Citations: 11     
  48. Lo WC, Uribe-Patarroyo N, Nam AS, Villiger M, Vakoc BJ, Bouma BE. Laser thermal therapy monitoring using complex differential variance in optical coherence tomography. J Biophotonics. 2017 01; 10(1):84-91. PMID: 27623742.
    Citations: 5     Fields:    Translation:Animals
  49. Uribe-Patarroyo N, Bouma BE. Velocity gradients in spatially resolved laser Doppler flowmetry and dynamic light scattering with confocal and coherence gating. Phys Rev E. 2016 Aug; 94(2-1):022604. PMID: 27627357.
    Citations: 9     Fields:    
  50. Golberg A, Villiger M, Khan S, Quinn KP, Lo WCY, Bouma BE, Mihm MC, Austen WG, Yarmush ML. Preventing Scars after Injury with Partial Irreversible Electroporation. J Invest Dermatol. 2016 11; 136(11):2297-2304. PMID: 27393126.
    Citations: 1     Fields:    Translation:Animals
  51. Blatter C, Meijer EF, Nam AS, Jones D, Bouma BE, Padera TP, Vakoc BJ. In vivo label-free measurement of lymph flow velocity and volumetric flow rates using Doppler optical coherence tomography. Sci Rep. 2016 07 05; 6:29035. PMID: 27377852.
    Citations: 16     Fields:    Translation:Animals
  52. Villiger M, Lorenser D, McLaughlin RA, Quirk BC, Kirk RW, Bouma BE, Sampson DD. Deep tissue volume imaging of birefringence through fibre-optic needle probes for the delineation of breast tumour. Sci Rep. 2016 07 01; 6:28771. PMID: 27364229.
    Citations: 35     Fields:    Translation:Humans
  53. van der Sijde JN, Karanasos A, Villiger M, Bouma BE, Regar E. First-in-man assessment of plaque rupture by polarization-sensitive optical frequency domain imaging in vivo. Eur Heart J. 2016 06 21; 37(24):1932. PMID: 27174288.
    Citations: 11     Fields:    Translation:Humans
  54. Jang SJ, Park HS, Song JW, Kim TS, Cho HS, Kim S, Bouma BE, Kim JW, Oh WY. ECG-Triggered, Single Cardiac Cycle, High-Speed, 3D, Intracoronary OCT. JACC Cardiovasc Imaging. 2016 05; 9(5):623-5. PMID: 27151525.
    Citations: 2     Fields:    Translation:Animals
  55. Lo WCY, Villiger M, Golberg A, Broelsch GF, Khan S, Lian CG, Austen WG, Yarmush M, Bouma BE. Longitudinal, 3D Imaging of Collagen Remodeling in Murine Hypertrophic Scars In Vivo Using Polarization-Sensitive Optical Frequency Domain Imaging. J Invest Dermatol. 2016 Jan; 136(1):84-92. PMID: 26763427.
    Citations: 19     Fields:    Translation:Animals
  56. Uribe-Patarroyo N, Bouma BE. Rotational distortion correction in endoscopic optical coherence tomography based on speckle decorrelation. Opt Lett. 2015 Dec 01; 40(23):5518-21. PMID: 26625040.
    Citations: 15     Fields:    
  57. Gerbaud E, Weisz G, Tanaka A, Kashiwagi M, Shimizu T, Wang L, Souza C, Bouma BE, Suter MJ, Shishkov M, Ughi GJ, Halpern EF, Rosenberg M, Waxman S, Moses JW, Mintz GS, Maehara A, Tearney GJ. Multi-laboratory inter-institute reproducibility study of IVOCT and IVUS assessments using published consensus document definitions. Eur Heart J Cardiovasc Imaging. 2016 Jul; 17(7):756-64. PMID: 26377904.
    Citations: 3     Fields:    Translation:Humans
  58. Lippok N, Villiger M, Bouma BE. Degree of polarization (uniformity) and depolarization index: unambiguous depolarization contrast for optical coherence tomography. Opt Lett. 2015 Sep 01; 40(17):3954-7. PMID: 26368685.
    Citations: 17     Fields:    
  59. Lippok N, Villiger M, Jun C, Bouma BE. Single input state, single-mode fiber-based polarization-sensitive optical frequency domain imaging by eigenpolarization referencing. Opt Lett. 2015 May 01; 40(9):2025-8. PMID: 25927775.
    Citations: 3     Fields:    Translation:HumansAnimals
  60. Suter MJ, Kashiwagi M, Gallagher KA, Nadkarni SK, Asanani N, Tanaka A, Conditt GB, Tellez A, Milewski K, Kaluza GL, Granada JF, Bouma BE, Tearney GJ. Optimizing flushing parameters in intracoronary optical coherence tomography: an in vivo swine study. Int J Cardiovasc Imaging. 2015 Aug; 31(6):1097-106. PMID: 25922149.
    Citations: 4     Fields:    Translation:Animals
  61. Han M, Kim K, Jang SJ, Cho HS, Bouma BE, Oh WY, Ryu S. GPU-accelerated framework for intracoronary optical coherence tomography imaging at the push of a button. PLoS One. 2015; 10(4):e0124192. PMID: 25880375.
    Citations: 4     Fields:    Translation:Humans
  62. Beaudette K, Baac HW, Madore WJ, Villiger M, Godbout N, Bouma BE, Boudoux C. Laser tissue coagulation and concurrent optical coherence tomography through a double-clad fiber coupler. Biomed Opt Express. 2015 Apr 01; 6(4):1293-303. PMID: 25909013.
    Citations: 6     
  63. Quinn KP, Golberg A, Broelsch GF, Khan S, Villiger M, Bouma B, Austen WG, Sheridan RL, Mihm MC, Yarmush ML, Georgakoudi I. An automated image processing method to quantify collagen fibre organization within cutaneous scar tissue. Exp Dermatol. 2015 Jan; 24(1):78-80. PMID: 25256009.
    Citations: 9     Fields:    Translation:AnimalsCells
  64. Frenette M, Hatamimoslehabadi M, Bellinger-Buckley S, Laoui S, La J, Bag S, Mallidi S, Hasan T, Bouma B, Yelleswarapu C, Rochford J. Shining light on the dark side of imaging: excited state absorption enhancement of a bis-styryl BODIPY photoacoustic contrast agent. J Am Chem Soc. 2014 Nov 12; 136(45):15853-6. PMID: 25329769.
    Citations: 12     Fields:    Translation:Cells
  65. Jun C, Villiger M, Oh WY, Bouma BE. All-fiber wavelength swept ring laser based on Fabry-Perot filter for optical frequency domain imaging. Opt Express. 2014 Oct 20; 22(21):25805-14. PMID: 25401614.
    Citations: 6     Fields:    Translation:Cells
  66. Uribe-Patarroyo N, Villiger M, Bouma BE. Quantitative technique for robust and noise-tolerant speed measurements based on speckle decorrelation in optical coherence tomography. Opt Express. 2014 Oct 06; 22(20):24411-29. PMID: 25322018.
    Citations: 14     Fields:    
  67. Villiger M, Bouma BE. Practical decomposition for physically admissible differential Mueller matrices. Opt Lett. 2014 Apr 01; 39(7):1779-82. PMID: 24686603.
    Citations: 5     Fields:    
  68. Baac HW, Uribe-Patarroyo N, Bouma BE. High-energy pulsed Raman fiber laser for biological tissue coagulation. Opt Express. 2014 Mar 24; 22(6):7113-23. PMID: 24664059.
    Citations: 3     Fields:    Translation:Animals
  69. Suter MJ, Gora MJ, Lauwers GY, Arnason T, Sauk J, Gallagher KA, Kava L, Tan KM, Soomro AR, Gallagher TP, Gardecki JA, Bouma BE, Rosenberg M, Nishioka NS, Tearney GJ. Esophageal-guided biopsy with volumetric laser endomicroscopy and laser cautery marking: a pilot clinical study. Gastrointest Endosc. 2014 Jun; 79(6):886-96. PMID: 24462171.
    Citations: 29     Fields:    Translation:Humans
  70. Cho HS, Jang SJ, Kim K, Dan-Chin-Yu AV, Shishkov M, Bouma BE, Oh WY. High frame-rate intravascular optical frequency-domain imaging in vivo. Biomed Opt Express. 2013 Dec 16; 5(1):223-32. PMID: 24466489.
    Citations: 15     
  71. Namati E, Warger WC, Unglert CI, Eckert JE, Hostens J, Bouma BE, Tearney GJ. Four-dimensional visualization of subpleural alveolar dynamics in vivo during uninterrupted mechanical ventilation of living swine. Biomed Opt Express. 2013; 4(11):2492-506. PMID: 24298409.
    Citations: 4     
  72. Schlachter SC, Kang D, Gora MJ, Vacas-Jacques P, Wu T, Carruth RW, Wilsterman EJ, Bouma BE, Woods K, Tearney GJ. Spectrally encoded confocal microscopy of esophageal tissues at 100 kHz line rate. Biomed Opt Express. 2013; 4(9):1636-45. PMID: 24049684.
    Citations: 8     
  73. Villiger M, Zhang EZ, Nadkarni SK, Oh WY, Vakoc BJ, Bouma BE. Spectral binning for mitigation of polarization mode dispersion artifacts in catheter-based optical frequency domain imaging. Opt Express. 2013 Jul 15; 21(14):16353-69. PMID: 23938487.
    Citations: 39     Fields:    Translation:Humans
  74. Yonetsu T, Bouma BE, Kato K, Fujimoto JG, Jang IK. Optical coherence tomography– 15 years in cardiology. Circ J. 2013; 77(8):1933-40. PMID: 23856651.
    Citations: 19     Fields:    Translation:HumansAnimals
  75. Sauk J, Coron E, Kava L, Suter M, Gora M, Gallagher K, Rosenberg M, Ananthakrishnan A, Nishioka N, Lauwers G, Woods K, Brugge W, Forcione D, Bouma BE, Tearney G. Interobserver agreement for the detection of Barrett's esophagus with optical frequency domain imaging. Dig Dis Sci. 2013 Aug; 58(8):2261-5. PMID: 23508980.
    Citations: 16     Fields:    Translation:Humans
  76. Villiger M, Zhang EZ, Nadkarni S, Oh WY, Bouma BE, Vakoc BJ. Artifacts in polarization-sensitive optical coherence tomography caused by polarization mode dispersion. Opt Lett. 2013 Mar 15; 38(6):923-5. PMID: 23503261.
    Citations: 18     Fields:    
  77. Hariri LP, Applegate MB, Mino-Kenudson M, Mark EJ, Bouma BE, Tearney GJ, Suter MJ. Optical frequency domain imaging of ex vivo pulmonary resection specimens: obtaining one to one image to histopathology correlation. J Vis Exp. 2013 Jan 22; (71). PMID: 23381470.
    Citations: 7     Fields:    Translation:HumansAnimals
  78. Hariri LP, Villiger M, Applegate MB, Mino-Kenudson M, Mark EJ, Bouma BE, Suter MJ. Seeing beyond the bronchoscope to increase the diagnostic yield of bronchoscopic biopsy. Am J Respir Crit Care Med. 2013 Jan 15; 187(2):125-9. PMID: 23322794.
    Citations: 12     Fields:    Translation:Humans
  79. Zhang EZ, Oh WY, Villiger ML, Chen L, Bouma BE, Vakoc BJ. Numerical compensation of system polarization mode dispersion in polarization-sensitive optical coherence tomography. Opt Express. 2013 Jan 14; 21(1):1163-80. PMID: 23389009.
    Citations: 18     Fields:    Translation:Animals
  80. Gora MJ, Sauk JS, Carruth RW, Gallagher KA, Suter MJ, Nishioka NS, Kava LE, Rosenberg M, Bouma BE, Tearney GJ. Tethered capsule endomicroscopy enables less invasive imaging of gastrointestinal tract microstructure. Nat Med. 2013 Feb; 19(2):238-40. PMID: 23314056.
    Citations: 81     Fields:    Translation:Humans
  81. Hariri LP, Applegate MB, Mino-Kenudson M, Mark EJ, Medoff BD, Luster AD, Bouma BE, Tearney GJ, Suter MJ. Volumetric optical frequency domain imaging of pulmonary pathology with precise correlation to histopathology. Chest. 2013 Jan; 143(1):64-74. PMID: 22459781.
    Citations: 21     Fields:    Translation:Humans
  82. Yang SY, O'Cearbhaill ED, Sisk GC, Park KM, Cho WK, Villiger M, Bouma BE, Pomahac B, Karp JM. A bio-inspired swellable microneedle adhesive for mechanical interlocking with tissue. Nat Commun. 2013; 4:1702. PMID: 23591869.
    Citations: 45     Fields:    
  83. Unglert CI, Warger WC, Hostens J, Namati E, Birngruber R, Bouma BE, Tearney GJ. Validation of two-dimensional and three-dimensional measurements of subpleural alveolar size parameters by optical coherence tomography. J Biomed Opt. 2012 Dec; 17(12):126015. PMID: 23235834.
    Citations: 3     Fields:    Translation:Animals
  84. Coron E, Auksorius E, Pieretti A, Mahé MM, Liu L, Steiger C, Bromberg Y, Bouma B, Tearney G, Neunlist M, Goldstein AM. Full-field optical coherence microscopy is a novel technique for imaging enteric ganglia in the gastrointestinal tract. Neurogastroenterol Motil. 2012 Dec; 24(12):e611-21. PMID: 23106847.
    Citations: 2     Fields:    Translation:HumansAnimals
  85. van Soest G, Villiger M, Regar E, Tearney GJ, Bouma BE, van der Steena AF. Errata: Frequency domain multiplexing for speckle reduction in optical coherence tomography. J Biomed Opt. 2012 Sep 28; 17(9):99801-1. PMID: 23085929.
  86. Tan KM, Shishkov M, Chee A, Applegate MB, Bouma BE, Suter MJ. Flexible transbronchial optical frequency domain imaging smart needle for biopsy guidance. Biomed Opt Express. 2012 Aug 01; 3(8):1947-54. PMID: 22876357.
    Citations: 16     
  87. Unglert CI, Namati E, Warger WC, Liu L, Yoo H, Kang D, Bouma BE, Tearney GJ. Evaluation of optical reflectance techniques for imaging of alveolar structure. J Biomed Opt. 2012 Jul; 17(7):071303. PMID: 22894464.
    Citations: 4     Fields:    Translation:Animals
  88. van Soest G, Villiger M, Regar E, Tearney GJ, Bouma BE, van der Steen AF. Frequency domain multiplexing for speckle reduction in optical coherence tomography. J Biomed Opt. 2012 Jul; 17(7):076018. PMID: 22894501.
    Citations: 7     Fields:    Translation:Humans
  89. Jamil Z, Tearney G, Bruining N, Sihan K, van Soest G, Ligthart J, van Domburg R, Bouma B, Regar E. Interstudy reproducibility of the second generation, Fourier domain optical coherence tomography in patients with coronary artery disease and comparison with intravascular ultrasound: a study applying automated contour detection. Int J Cardiovasc Imaging. 2013 Jan; 29(1):39-51. PMID: 22639296.
    Citations: 4     Fields:    Translation:Humans
  90. Vakoc BJ, Fukumura D, Jain RK, Bouma BE. Cancer imaging by optical coherence tomography: preclinical progress and clinical potential. Nat Rev Cancer. 2012 Apr 05; 12(5):363-8. PMID: 22475930.
    Citations: 71     Fields:    Translation:HumansAnimals
  91. Tearney GJ, Regar E, Akasaka T, Adriaenssens T, Barlis P, Bezerra HG, Bouma B, Bruining N, Cho JM, Chowdhary S, Costa MA, de Silva R, Dijkstra J, Di Mario C, Dudek D, Dudeck D, Falk E, Falk E, Feldman MD, Fitzgerald P, Garcia-Garcia HM, Garcia H, Gonzalo N, Granada JF, Guagliumi G, Holm NR, Honda Y, Ikeno F, Kawasaki M, Kochman J, Koltowski L, Kubo T, Kume T, Kyono H, Lam CC, Lamouche G, Lee DP, Leon MB, Maehara A, Manfrini O, Mintz GS, Mizuno K, Morel MA, Nadkarni S, Okura H, Otake H, Pietrasik A, Prati F, Räber L, Radu MD, Rieber J, Riga M, Rollins A, Rosenberg M, Sirbu V, Serruys PW, Shimada K, Shinke T, Shite J, Siegel E, Sonoda S, Sonada S, Suter M, Takarada S, Tanaka A, Terashima M, Thim T, Troels T, Uemura S, Ughi GJ, van Beusekom HM, van der Steen AF, van Es GA, van Es GA, van Soest G, Virmani R, Waxman S, Weissman NJ, Weisz G. Consensus standards for acquisition, measurement, and reporting of intravascular optical coherence tomography studies: a report from the International Working Group for Intravascular Optical Coherence Tomography Standardization and Validation. J Am Coll Cardiol. 2012 Mar 20; 59(12):1058-72. PMID: 22421299.
    Citations: 244     Fields:    Translation:Humans
  92. Auksorius E, Bromberg Y, Motiejunaite R, Pieretti A, Liu L, Coron E, Aranda J, Goldstein AM, Bouma BE, Kazlauskas A, Tearney GJ. Dual-modality fluorescence and full-field optical coherence microscopy for biomedical imaging applications. Biomed Opt Express. 2012 Mar 01; 3(3):661-6. PMID: 22435110.
    Citations: 14     
  93. Gora M, Yoo H, Suter MJ, Gallagher KA, Bouma BE, Nishioka NS, Tearney GJ. Optical frequency domain imaging system and catheters for volumetric imaging of the human esophagus. Photonics Lett Pol. 2011 Dec 31; 3(4):144-146. PMID: 22924122.
    Citations: 1     
  94. Yoo H, Kim JW, Shishkov M, Namati E, Morse T, Shubochkin R, McCarthy JR, Ntziachristos V, Bouma BE, Jaffer FA, Tearney GJ. Intra-arterial catheter for simultaneous microstructural and molecular imaging in vivo. Nat Med. 2011 Nov 06; 17(12):1680-4. PMID: 22057345.
    Citations: 105     Fields:    Translation:HumansAnimals
  95. Villiger M, Soroka A, Tearney GJ, Bouma BE, Vakoc BJ. Injury depth control from combined wavelength and power tuning in scanned beam laser thermal therapy. J Biomed Opt. 2011 Nov; 16(11):118001. PMID: 22112139.
    Citations: 4     Fields:    Translation:Animals
  96. Ha J, Yoo H, Tearney GJ, Bouma BE. Compensation of motion artifacts in intracoronary optical frequency domain imaging and optical coherence tomography. Int J Cardiovasc Imaging. 2012 Aug; 28(6):1299-304. PMID: 21993895.
    Citations: 5     Fields:    Translation:Humans
  97. Tanaka A, Shimada K, Tearney GJ, Kitabata H, Taguchi H, Fukuda S, Kashiwagi M, Kubo T, Takarada S, Hirata K, Mizukoshi M, Yoshikawa J, Bouma BE, Akasaka T. Conformational change in coronary artery structure assessed by optical coherence tomography in patients with vasospastic angina. J Am Coll Cardiol. 2011 Oct 04; 58(15):1608-13. PMID: 21958888.
    Citations: 15     Fields:    Translation:Humans
  98. Yoo H, Kang D, Katz AJ, Lauwers GY, Nishioka NS, Yagi Y, Tanpowpong P, Namati J, Bouma BE, Tearney GJ. Reflectance confocal microscopy for the diagnosis of eosinophilic esophagitis: a pilot study conducted on biopsy specimens. Gastrointest Endosc. 2011 Nov; 74(5):992-1000. PMID: 21944314.
    Citations: 17     Fields:    Translation:HumansCells
  99. Suter MJ, Nadkarni SK, Weisz G, Tanaka A, Jaffer FA, Bouma BE, Tearney GJ. Intravascular optical imaging technology for investigating the coronary artery. JACC Cardiovasc Imaging. 2011 Sep; 4(9):1022-39. PMID: 21920342.
    Citations: 32     Fields:    Translation:HumansAnimals
  100. Liu L, Gardecki JA, Nadkarni SK, Toussaint JD, Yagi Y, Bouma BE, Tearney GJ. Imaging the subcellular structure of human coronary atherosclerosis using micro-optical coherence tomography. Nat Med. 2011 Jul 10; 17(8):1010-4. PMID: 21743452.
    Citations: 119     Fields:    Translation:HumansAnimalsCells
  101. Kang D, Yoo H, Jillella P, Bouma BE, Tearney GJ. Comprehensive volumetric confocal microscopy with adaptive focusing. Biomed Opt Express. 2011 Jun 01; 2(6):1412-22. PMID: 21698005.
    Citations: 7     
  102. Gonzalo N, Tearney GJ, van Soest G, Serruys P, Garcia-Garcia HM, Bouma BE, Regar E. Witnessed coronary plaque rupture during cardiac catheterization. JACC Cardiovasc Imaging. 2011 Apr; 4(4):437-8. PMID: 21459070.
    Citations: 4     Fields:    Translation:Humans
  103. Choma MA, Suter MJ, Vakoc BJ, Bouma BE, Tearney GJ. Physiological homology between Drosophila melanogaster and vertebrate cardiovascular systems. Dis Model Mech. 2011 May; 4(3):411-20. PMID: 21183476.
    Citations: 18     Fields:    Translation:HumansAnimals
  104. Tearney GJ, Bouma BE. Shedding light on bioabsorbable stent struts seen by optical coherence tomography in the ABSORB trial. Circulation. 2010 Nov 30; 122(22):2234-5. PMID: 20974997.
    Citations: 1     Fields:    Translation:HumansAnimals
  105. Choma MA, Suter MJ, Vakoc BJ, Bouma BE, Tearney GJ. Heart wall velocimetry and exogenous contrast-based cardiac flow imaging in Drosophila melanogaster using Doppler optical coherence tomography. J Biomed Opt. 2010 Sep-Oct; 15(5):056020. PMID: 21054114.
    Citations: 8     Fields:    Translation:Animals
  106. Oh WY, Vakoc BJ, Shishkov M, Tearney GJ, Bouma BE. >400 kHz repetition rate wavelength-swept laser and application to high-speed optical frequency domain imaging. Opt Lett. 2010 Sep 01; 35(17):2919-21. PMID: 20808369.
    Citations: 35     Fields:    Translation:Humans
  107. Yuan J, Peng L, Bouma BE, Tearney GJ. Quantitative FRET measurement by high-speed fluorescence excitation and emission spectrometer. Opt Express. 2010 Aug 30; 18(18):18839-51. PMID: 20940777.
    Citations: 3     Fields:    Translation:AnimalsCells
  108. Hariri LP, Bouma BE, Waxman S, Shishkov M, Vakoc BJ, Suter MJ, Freilich MI, Oh WY, Rosenberg M, Tearney GJ. An automatic image processing algorithm for initiating and terminating intracoronary ?OFDI pullback. Biomed Opt Express. 2010 Aug 10; 1(2):566-573. PMID: 21258490.
  109. Gonzalo N, Tearney GJ, Serruys PW, van Soest G, Okamura T, García-García HM, Jan van Geuns R, van der Ent M, Ligthart J, Bouma BE, Regar E. Second-generation optical coherence tomography in clinical practice. High-speed data acquisition is highly reproducible in patients undergoing percutaneous coronary intervention. Rev Esp Cardiol. 2010 Aug; 63(8):893-903. PMID: 20738934.
    Citations: 14     Fields:    Translation:Humans
  110. Kang DK, Suter MJ, Boudoux C, Yachimski PS, Puricelli WP, Nishioka NS, Mino-Kenudson M, Lauwers GY, Bouma BE, Tearney GJ. Co-registered spectrally encoded confocal microscopy and optical frequency domain imaging system. J Microsc. 2010 Aug 01; 239(2):87-91. PMID: 20629914.
    Citations: 6     Fields:    Translation:Humans
  111. Ha JY, Shishkov M, Colice M, Oh WY, Yoo H, Liu L, Tearney GJ, Bouma BE. Compensation of motion artifacts in catheter-based optical frequency domain imaging. Opt Express. 2010 May 24; 18(11):11418-27. PMID: 20589002.
    Citations: 5     Fields:    Translation:HumansAnimals
  112. O'Donnell M, McVeigh ER, Strauss HW, Tanaka A, Bouma BE, Tearney GJ, Guttman MA, Garcia EV. Multimodality cardiovascular molecular imaging technology. J Nucl Med. 2010 May 01; 51 Suppl 1:38S-50S. PMID: 20457794.
    Citations: 7     Fields:    Translation:HumansAnimals
  113. Waxman S, Freilich MI, Suter MJ, Shishkov M, Bilazarian S, Virmani R, Bouma BE, Tearney GJ. A case of lipid core plaque progression and rupture at the edge of a coronary stent: elucidating the mechanisms of drug-eluting stent failure. Circ Cardiovasc Interv. 2010 Apr; 3(2):193-6. PMID: 20407116.
    Citations: 11     Fields:    Translation:Humans
  114. van Soest G, Goderie T, Regar E, Koljenovic S, van Leenders GL, Gonzalo N, van Noorden S, Okamura T, Bouma BE, Tearney GJ, Oosterhuis JW, Serruys PW, van der Steen AF. Atherosclerotic tissue characterization in vivo by optical coherence tomography attenuation imaging. J Biomed Opt. 2010 Jan-Feb; 15(1):011105. PMID: 20210431.
    Citations: 67     Fields:    Translation:HumansCells
  115. Choi B, Bouma B, Fukumura D, Jain RK. Optical methods in vascular biology and medicine. J Biomed Opt. 2010 Jan-Feb; 15(1):011001. PMID: 20210426.
    Citations:    Fields:    Translation:HumansAnimals
  116. Tanaka A, Tearney GJ, Bouma BE. Challenges on the frontier of intracoronary imaging: atherosclerotic plaque macrophage measurement by optical coherence tomography. J Biomed Opt. 2010 Jan-Feb; 15(1):011104. PMID: 20210430.
    Citations: 9     Fields:    Translation:HumansCells
  117. Kang D, Suter MJ, Boudoux C, Yoo H, Yachimski PS, Puricelli WP, Nishioka NS, Mino-Kenudson M, Lauwers GY, Bouma BE, Tearney GJ. Comprehensive imaging of gastroesophageal biopsy samples by spectrally encoded confocal microscopy. Gastrointest Endosc. 2010 Jan; 71(1):35-43. PMID: 19922916.
    Citations: 19     Fields:    Translation:Humans
  118. Suter MJ, Jillella PA, Vakoc BJ, Halpern EF, Mino-Kenudson M, Lauwers GY, Bouma BE, Nishioka NS, Tearney GJ. Image-guided biopsy in the esophagus through comprehensive optical frequency domain imaging and laser marking: a study in living swine. Gastrointest Endosc. 2010 Feb; 71(2):346-53. PMID: 19879573.
    Citations: 24     Fields:    Translation:Animals
  119. Goldberg BD, Vakoc BJ, Oh WY, Suter MJ, Waxman S, Freilich MI, Bouma BE, Tearney GJ. Performance of reduced bit-depth acquisition for optical frequency domain imaging. Opt Express. 2009 Sep 14; 17(19):16957-68. PMID: 19770914.
    Citations: 8     Fields:    Translation:Humans