32213Griffin M Weber, M.D., Ph.D.GriffinWeberGMW3

Harvard Medical SchoolCountway Library, Room 30610 Shattuck StBoston, MA 02115617/432-613442.33734900000000-71.10335500000000

BIDMCBeth Israel Deaconess Medical CenterMedicineAssociate Professor of MedicineAssociate ProfessorHMSHarvard Medical SchoolBiomedical InformaticsAssociate Professor of Biomedical InformaticsAssociate Professorhttps://connects.catalyst.harvard.edu/Profiles/profile/124894410000pL2cuNkxPHzDUXsFbEKk2S1fFQ36siDUV7YkhsY=https://connects.catalyst.harvard.edu/Profiles/profile/Modules/CustomViewPersonGeneralInfo/PhotoHandler.ashx?NodeID=1248944https://connects.catalyst.harvard.edu/Profiles/profile/322948659Bridging the Gap: The State of Global Transplant Research Collaboration. Transplant Direct. 2025 Jul; 11(7):e1819.https://connects.catalyst.harvard.edu/Profiles/profile/282589792uCite: The union of nine large-scale public PubMed citation datasets with reliability filtering. Data Brief. 2025 Jun; 60:111535.https://connects.catalyst.harvard.edu/Profiles/profile/282594761Human BioMolecular Atlas Program (HuBMAP): 3D Human Reference Atlas construction and usage. Nat Methods. 2025 Apr; 22(4):845-860.https://connects.catalyst.harvard.edu/Profiles/profile/279579932Functional tissue units in the Human Reference Atlas. Nat Commun. 2025 Feb 11; 16(1):1526.https://connects.catalyst.harvard.edu/Profiles/profile/271912675Understanding Data Differences across the ENACT Federated Research Network. medRxiv. 2025 Jan 17.https://connects.catalyst.harvard.edu/Profiles/profile/251470520Towards cross-application model-agnostic federated cohort discovery. J Am Med Inform Assoc. 2024 Oct 01; 31(10):2202-2209.https://connects.catalyst.harvard.edu/Profiles/profile/260501359Vasculature segmentation in 3D hierarchical phase-contrast tomography images of human kidneys. bioRxiv. 2024 Aug 26.https://connects.catalyst.harvard.edu/Profiles/profile/241287534Human BioMolecular Atlas Program (HuBMAP): 3D Human Reference Atlas Construction and Usage. bioRxiv. 2024 Aug 14.https://connects.catalyst.harvard.edu/Profiles/profile/244666495SlowMoMan: a web app for discovery of important features along user-drawn trajectories in 2D embeddings. Bioinform Adv. 2024; 4(1):vbae095.https://connects.catalyst.harvard.edu/Profiles/profile/235576695Mapping the Anatomy of the Human Lymphatic System. J Reconstr Microsurg. 2024 Nov; 40(9):672-679.https://connects.catalyst.harvard.edu/Profiles/profile/220720022A broadly applicable approach to enrich electronic-health-record cohorts by identifying patients with complete data: a multisite evaluation. J Am Med Inform Assoc. 2023 11 17; 30(12):1985-1994.https://connects.catalyst.harvard.edu/Profiles/profile/224561334Functional Tissue Units in the Human Reference Atlas. bioRxiv. 2023 Oct 26.https://connects.catalyst.harvard.edu/Profiles/profile/224559922The power of partnership: Exploring collaboration dynamics in U.S. transplant research. Am J Surg. 2024 01; 227:24-33.https://connects.catalyst.harvard.edu/Profiles/profile/215470744Anatomical structures, cell types, and biomarkers of the healthy human blood vasculature. Sci Data. 2023 07 19; 10(1):452.https://connects.catalyst.harvard.edu/Profiles/profile/215473069Generate Analysis-Ready Data for Real-world Evidence: Tutorial for Harnessing Electronic Health Records With Advanced Informatic Technologies. J Med Internet Res. 2023 05 25; 25:e45662.https://connects.catalyst.harvard.edu/Profiles/profile/215499532Potential pitfalls in the use of real-world data for studying long COVID. Nat Med. 2023 05; 29(5):1040-1043.https://connects.catalyst.harvard.edu/Profiles/profile/207980209Mapping the lymphatic system across body scales and expertise domains: A report from the 2021 National Heart, Lung, and Blood Institute workshop at the Boston Lymphatic Symposium. Front Physiol. 2023; 14:1099403.https://connects.catalyst.harvard.edu/Profiles/profile/207979357Antiplatelet medications and intracranial hemorrhage in patients with primary brain tumors. J Thromb Haemost. 2023 05; 21(5):1148-1155.https://connects.catalyst.harvard.edu/Profiles/profile/207978485Informative missingness: What can we learn from patterns in missing laboratory data in the electronic health record? J Biomed Inform. 2023 03; 139:104306.https://connects.catalyst.harvard.edu/Profiles/profile/205959990Acute respiratory distress syndrome after SARS-CoV-2 infection on young adult population: International observational federated study based on electronic health records through the 4CE consortium. PLoS One. 2023; 18(1):e0266985.https://connects.catalyst.harvard.edu/Profiles/profile/205958717Tissue registration and exploration user interfaces in support of a human reference atlas. Commun Biol. 2022 12 13; 5(1):1369.https://connects.catalyst.harvard.edu/Profiles/profile/203959311Long-term kidney function recovery and mortality after COVID-19-associated acute kidney injury: An international multi-centre observational cohort study. EClinicalMedicine. 2023 Jan; 55:101724.https://connects.catalyst.harvard.edu/Profiles/profile/203368931SurvMaximin: Robust federated approach to transporting survival risk prediction models. J Biomed Inform. 2022 10; 134:104176.https://connects.catalyst.harvard.edu/Profiles/profile/200876331Confederated learning in healthcare: Training machine learning models using disconnected data separated by individual, data type and identity for Large-Scale health system Intelligence. J Biomed Inform. 2022 10; 134:104151.https://connects.catalyst.harvard.edu/Profiles/profile/200870597Multiview Incomplete Knowledge Graph Integration with application to cross-institutional EHR data harmonization. J Biomed Inform. 2022 09; 133:104147.https://connects.catalyst.harvard.edu/Profiles/profile/198864015International electronic health record-derived post-acute sequelae profiles of COVID-19 patients. NPJ Digit Med. 2022 Jun 29; 5(1):81.https://connects.catalyst.harvard.edu/Profiles/profile/198864019Changes in laboratory value improvement and mortality rates over the course of the pandemic: an international retrospective cohort study of hospitalised patients infected with SARS-CoV-2. BMJ Open. 2022 06 23; 12(6):e057725.https://connects.catalyst.harvard.edu/Profiles/profile/198864025International comparisons of laboratory values from the 4CE collaborative to predict COVID-19 mortality. NPJ Digit Med. 2022 Jun 13; 5(1):74.https://connects.catalyst.harvard.edu/Profiles/profile/195972516Distinguishing Admissions Specifically for COVID-19 From Incidental SARS-CoV-2 Admissions: National Retrospective Electronic Health Record Study. J Med Internet Res. 2022 05 18; 24(5):e37931.https://connects.catalyst.harvard.edu/Profiles/profile/190923589Antiplatelet medications and risk of intracranial hemorrhage in patients with metastatic brain tumors. Blood Adv. 2022 03 08; 6(5):1559-1565.https://connects.catalyst.harvard.edu/Profiles/profile/194560471Distinguishing Admissions Specifically for COVID-19 from Incidental SARS-CoV-2 Admissions: A National EHR Research Consortium Study. medRxiv. 2022 Feb 18.https://connects.catalyst.harvard.edu/Profiles/profile/189251872Authorship Correction: International Changes in COVID-19 Clinical Trajectories Across 315 Hospitals and 6 Countries: Retrospective Cohort Study. J Med Internet Res. 2021 Nov 30; 23(11):e34625.https://connects.catalyst.harvard.edu/Profiles/profile/186490542ATLAS: an automated association test using probabilistically linked health records with application to genetic studies. J Am Med Inform Assoc. 2021 11 25; 28(12):2582-2592.https://connects.catalyst.harvard.edu/Profiles/profile/188493326Anatomical structures, cell types and biomarkers of the Human Reference Atlas. Nat Cell Biol. 2021 11; 23(11):1117-1128.https://connects.catalyst.harvard.edu/Profiles/profile/185564310International Changes in COVID-19 Clinical Trajectories Across 315 Hospitals and 6 Countries: Retrospective Cohort Study. J Med Internet Res. 2021 10 11; 23(10):e31400.https://connects.catalyst.harvard.edu/Profiles/profile/175734773Validation of an internationally derived patient severity phenotype to support COVID-19 analytics from electronic health record data. J Am Med Inform Assoc. 2021 07 14; 28(7):1411-1420.https://connects.catalyst.harvard.edu/Profiles/profile/183051614Expected 10-anonymity of HyperLogLog sketches for federated queries of clinical data repositories. Bioinformatics. 2021 07 12; 37(Suppl_1):i151-i160.https://connects.catalyst.harvard.edu/Profiles/profile/181965419International Analysis of Electronic Health Records of Children and Youth Hospitalized With COVID-19 Infection in 6 Countries. JAMA Netw Open. 2021 06 01; 4(6):e2112596.https://connects.catalyst.harvard.edu/Profiles/profile/181964005Development of a Coronavirus Disease 2019 (COVID-19) Application Ontology for the Accrual to Clinical Trials (ACT) network. JAMIA Open. 2021 Apr; 4(2):ooab036.https://connects.catalyst.harvard.edu/Profiles/profile/179645417Development of a COVID-19 Application Ontology for the ACT Network. medRxiv. 2021 Apr 14.https://connects.catalyst.harvard.edu/Profiles/profile/179644628Machine learning for patient risk stratification: standing on, or looking over, the shoulders of clinicians? NPJ Digit Med. 2021 Mar 30; 4(1):62.https://connects.catalyst.harvard.edu/Profiles/profile/176118989What Every Reader Should Know About Studies Using Electronic Health Record Data but May Be Afraid to Ask. J Med Internet Res. 2021 03 02; 23(3):e22219.https://connects.catalyst.harvard.edu/Profiles/profile/178267609The National COVID Cohort Collaborative (N3C): Rationale, design, infrastructure, and deployment. J Am Med Inform Assoc. 2021 03 01; 28(3):427-443.https://connects.catalyst.harvard.edu/Profiles/profile/175735414International Comparisons of Harmonized Laboratory Value Trajectories to Predict Severe COVID-19: Leveraging the 4CE Collaborative Across 342 Hospitals and 6 Countries: A Retrospective Cohort Study. medRxiv. 2021 Feb 05.https://connects.catalyst.harvard.edu/Profiles/profile/172384322Balancing Accuracy and Privacy in Federated Queries of Clinical Data Repositories: Algorithm Development and Validation. J Med Internet Res. 2020 11 03; 22(11):e18735.https://connects.catalyst.harvard.edu/Profiles/profile/166351193International electronic health record-derived COVID-19 clinical course profiles: the 4CE consortium. NPJ Digit Med. 2020; 3:109.https://connects.catalyst.harvard.edu/Profiles/profile/162738506Anticoagulation after intracranial hemorrhage in brain tumors: Risk of recurrent hemorrhage and venous thromboembolism. Res Pract Thromb Haemost. 2020 Jul; 4(5):860-865.https://connects.catalyst.harvard.edu/Profiles/profile/231197817HyperMinHash: MinHash in LogLog space. IEEE Trans Knowl Data Eng. 2022 Jan; 34(1):328-339.https://connects.catalyst.harvard.edu/Profiles/profile/149299213Considerations for Using the Vasculature as a Coordinate System to Map All the Cells in the Human Body. Front Cardiovasc Med. 2020; 7:29.https://connects.catalyst.harvard.edu/Profiles/profile/148210366Validation of an Electronic Health Record-Based Suicide Risk Prediction Modeling Approach Across Multiple Health Care Systems. JAMA Netw Open. 2020 03 02; 3(3):e201262.https://connects.catalyst.harvard.edu/Profiles/profile/141037280Clinical Concept Embeddings Learned from Massive Sources of Multimodal Medical Data. Pac Symp Biocomput. 2020; 25:295-306.https://connects.catalyst.harvard.edu/Profiles/profile/116788463Probabilistic record linkage of de-identified research datasets with discrepancies using diagnosis codes. Sci Data. 2019 01 08; 6:180298.https://connects.catalyst.harvard.edu/Profiles/profile/113915121Intracranial hemorrhage with direct oral anticoagulants in patients with brain tumors. J Thromb Haemost. 2019 01; 17(1):72-76.https://connects.catalyst.harvard.edu/Profiles/profile/322938189Literature-based automated discovery of tumor suppressor p53 phosphorylation and inhibition by NEK2. Proc Natl Acad Sci U S A. 2018 10 16; 115(42):10666-10671.https://connects.catalyst.harvard.edu/Profiles/profile/102819311Biases in electronic health record data due to processes within the healthcare system: retrospective observational study. BMJ. 2018 04 30; 361:k1479.https://connects.catalyst.harvard.edu/Profiles/profile/102759468Using Artificial Intelligence in an Intelligent Way to Improve Efficiency of a Heart Failure Care Team. 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J Am Med Inform Assoc. 2013 Jan 01; 20(1):172-9.https://connects.catalyst.harvard.edu/Profiles/profile/376403The co-morbidity burden of children and young adults with autism spectrum disorders. PLoS One. 2012; 7(4):e33224.https://connects.catalyst.harvard.edu/Profiles/profile/505128Current state of information technologies for the clinical research enterprise across academic medical centers. Clin Transl Sci. 2012 Jun; 5(3):281-4.https://connects.catalyst.harvard.edu/Profiles/profile/123022Direct2Experts: a pilot national network to demonstrate interoperability among research-networking platforms. J Am Med Inform Assoc. 2011 Dec; 18 Suppl 1:i157-60.https://connects.catalyst.harvard.edu/Profiles/profile/112417An online evidence-based decision support system for distinguishing benign from malignant vertebral compression fractures by magnetic resonance imaging feature analysis. 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