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One or more keywords matched the following items that are connected to Lipsitch, Marc
Item TypeName
Academic Article Potential benefits of a serodiagnostic test for herpes simplex virus type 1 (HSV-1) to prevent neonatal HSV-1 infection.
Academic Article Bacterial vaccines and serotype replacement: lessons from Haemophilus influenzae and prospects for Streptococcus pneumoniae.
Academic Article The effect of antiretroviral therapy on secondary transmission of HIV among men who have sex with men.
Academic Article Pneumococcal capsular polysaccharide structure predicts serotype prevalence.
Academic Article Competition among Streptococcus pneumoniae for intranasal colonization in a mouse model.
Academic Article Antibody-independent, interleukin-17A-mediated, cross-serotype immunity to pneumococci in mice immunized intranasally with the cell wall polysaccharide.
Academic Article Incremental increase in fitness cost with increased beta -lactam resistance in pneumococci evaluated by competition in an infant rat nasal colonization model.
Academic Article Age- and serogroup-related differences in observed durations of nasopharyngeal carriage of penicillin-resistant pneumococci.
Academic Article The within-host population dynamics of antibacterial chemotherapy: conditions for the evolution of resistance.
Academic Article Measuring and interpreting associations between antibiotic use and penicillin resistance in Streptococcus pneumoniae.
Academic Article Microbiology. Bacterial population genetics and disease.
Academic Article The analysis of hospital infection data using hidden Markov models.
Academic Article Interpreting results from trials of pneumococcal conjugate vaccines: a statistical test for detecting vaccine-induced increases in carriage of nonvaccine serotypes.
Academic Article Use of whole genome sequencing to estimate the mutation rate of Mycobacterium tuberculosis during latent infection.
Academic Article The prevalence and risk factors for pneumococcal colonization of the nasopharynx among children in Kilifi District, Kenya.
Academic Article Streptococcus pneumoniae capsular serotype invasiveness correlates with the degree of factor H binding and opsonization with C3b/iC3b.
Academic Article Modeling community- and individual-level effects of child-care center attendance on pneumococcal carriage.
Academic Article Visualizing pneumococcal infections in the lungs of live mice using bioluminescent Streptococcus pneumoniae transformed with a novel gram-positive lux transposon.
Academic Article Age-specific immunoglobulin g (IgG) and IgA to pneumococcal protein antigens in a population in coastal kenya.
Academic Article Strain characteristics of Streptococcus pneumoniae carriage and invasive disease isolates during a cluster-randomized clinical trial of the 7-valent pneumococcal conjugate vaccine.
Academic Article The population genetics of antibiotic resistance.
Academic Article The epidemiology of antibiotic resistance in hospitals: paradoxes and prescriptions.
Academic Article Ecological theory suggests that antimicrobial cycling will not reduce antimicrobial resistance in hospitals.
Academic Article The pneumococcal pilus predicts the absence of Staphylococcus aureus co-colonization in pneumococcal carriers.
Academic Article Prediction of serotypes causing invasive pneumococcal disease in unvaccinated and vaccinated populations.
Academic Article Serum serotype-specific pneumococcal anticapsular immunoglobulin g concentrations after immunization with a 9-valent conjugate pneumococcal vaccine correlate with nasopharyngeal acquisition of pneumococcus.
Academic Article Beneficial and perverse effects of isoniazid preventive therapy for latent tuberculosis infection in HIV-tuberculosis coinfected populations.
Academic Article Serum antipneumococcal antibodies and pneumococcal colonization in adults with chronic obstructive pulmonary disease.
Academic Article In vitro bactericidal activity of Streptococcus pneumoniae and bactericidal susceptibility of Staphylococcus aureus strains isolated from cocolonized versus noncocolonized children.
Academic Article Mechanisms by which antibiotics promote dissemination of resistant pneumococci in human populations.
Academic Article Interleukin-17A mediates acquired immunity to pneumococcal colonization.
Academic Article Is methicillin-resistant Staphylococcus aureus replacing methicillin-susceptible S. aureus?
Academic Article Apparent declining efficacy in randomized trials: examples of the Thai RV144 HIV vaccine and South African CAPRISA 004 microbicide trials.
Academic Article Pathogen diversity and hidden regimes of apparent competition.
Academic Article Estimating incidence curves of several infections using symptom surveillance data.
Academic Article Comparative genomics of recent Shiga toxin-producing Escherichia coli O104:H4: short-term evolution of an emerging pathogen.
Academic Article Re-emergence of the type 1 pilus among Streptococcus pneumoniae isolates in Massachusetts, USA.
Academic Article Serotype replacement in disease after pneumococcal vaccination.
Academic Article Pneumococcal sequence type replacement among American Indian children: a comparison of pre- and routine-PCV7 eras.
Academic Article Protection against nasopharyngeal colonization by Streptococcus pneumoniae is mediated by antigen-specific CD4+ T cells.
Academic Article Continued impact of pneumococcal conjugate vaccine on carriage in young children.
Academic Article The population dynamics of antimicrobial chemotherapy.
Academic Article CD4+ T cells mediate antibody-independent acquired immunity to pneumococcal colonization.
Academic Article The role of complement in innate and adaptive immunity to pneumococcal colonization and sepsis in a murine model.
Academic Article Patient sharing and population genetic structure of methicillin-resistant Staphylococcus aureus.
Academic Article Pneumococcal carriage and antibiotic resistance in young children before 13-valent conjugate vaccine.
Academic Article Comment on "Seroevidence for H5N1 influenza infections in humans: meta-analysis".
Academic Article SpxB is a suicide gene of Streptococcus pneumoniae and confers a selective advantage in an in vivo competitive colonization model.
Academic Article Oseltamivir for treatment and prevention of pandemic influenza A/H1N1 virus infection in households, Milwaukee, 2009.
Academic Article Quantifying interhospital patient sharing as a mechanism for infectious disease spread.
Academic Article Serotype specific invasive capacity and persistent reduction in invasive pneumococcal disease.
Academic Article Evolution, safety, and highly pathogenic influenza viruses.
Academic Article Vaccination against colonizing bacteria with multiple serotypes.
Academic Article Evaluating treatment protocols to prevent antibiotic resistance.
Academic Article Population biology, evolution, and infectious disease: convergence and synthesis.
Academic Article Are anticapsular antibodies the primary mechanism of protection against invasive pneumococcal disease?
Academic Article Intranasal immunization with killed unencapsulated whole cells prevents colonization and invasive disease by capsulated pneumococci.
Academic Article Virulence and transmissibility of pathogens: what is the relationship?
Academic Article Epidemiology and risk factors for Staphylococcus aureus colonization in children in the post-PCV7 era.
Academic Article Too little of a good thing: a paradox of moderate infection control.
Academic Article Clonal replacement among 19A Streptococcus pneumoniae in Massachusetts, prior to 13 valent conjugate vaccination.
Academic Article Genomic epidemiology of the Escherichia coli O104:H4 outbreaks in Europe, 2011.
Academic Article Distinct effects on diversifying selection by two mechanisms of immunity against Streptococcus pneumoniae.
Academic Article Reply to Guy et al.: Support for a bottleneck in the 2011 Escherichia coli O104:H4 outbreak in Germany.
Academic Article Antibodies to conserved pneumococcal antigens correlate with, but are not required for, protection against pneumococcal colonization induced by prior exposure in a mouse model.
Academic Article Diversity and antibiotic resistance among nonvaccine serotypes of Streptococcus pneumoniae carriage isolates in the post-heptavalent conjugate vaccine era.
Academic Article Antibody-independent, CD4+ T-cell-dependent protection against pneumococcal colonization elicited by intranasal immunization with purified pneumococcal proteins.
Academic Article Association of the pneumococcal pilus with certain capsular serotypes but not with increased virulence.
Academic Article Seasonality of antibiotic-resistant streptococcus pneumoniae that causes acute otitis media: a clue for an antibiotic-restriction policy?
Academic Article Exploring the relationship between incidence and the average age of infection during seasonal epidemics.
Academic Article Modelling seasonal variations in the age and incidence of Kawasaki disease to explore possible infectious aetiologies.
Academic Article Secular trends in Helicobacter pylori seroprevalence in adults in the United States: evidence for sustained race/ethnic disparities.
Academic Article Niche and neutral effects of acquired immunity permit coexistence of pneumococcal serotypes.
Academic Article Viral shedding and clinical illness in naturally acquired influenza virus infections.
Academic Article No coexistence for free: neutral null models for multistrain pathogens.
Academic Article The population dynamics of vertically and horizontally transmitted parasites.
Academic Article Impaired innate and adaptive immunity to Streptococcus pneumoniae and its effect on colonization in an infant mouse model.
Academic Article Rates of acquisition and clearance of pneumococcal serotypes in the nasopharynges of children in Kilifi District, Kenya.
Academic Article Resistance to antimicrobial chemotherapy: a prescription for research and action.
Academic Article Understanding the spread of antibiotic resistant pathogens in hospitals: mathematical models as tools for control.
Academic Article Recognition of pneumolysin by Toll-like receptor 4 confers resistance to pneumococcal infection.
Academic Article Projected benefits of active surveillance for vancomycin-resistant enterococci in intensive care units.
Academic Article Invited commentary: real-time tracking of control measures for emerging infections.
Academic Article What is the mechanism for persistent coexistence of drug-susceptible and drug-resistant strains of Streptococcus pneumoniae?
Academic Article Carried pneumococci in Massachusetts children: the contribution of clonal expansion and serotype switching.
Concept Respiratory Syncytial Virus Infections
Concept Asymptomatic Infections
Concept Bacterial Infections
Concept Rotavirus Infections
Concept Helicobacter Infections
Concept Catheter-Related Infections
Concept Streptococcal Infections
Concept Gram-Positive Bacterial Infections
Concept RNA Virus Infections
Concept Gram-Negative Bacterial Infections
Concept Laboratory Infection
Concept Haemophilus Infections
Concept HIV Infections
Concept Coronavirus Infections
Concept AIDS-Related Opportunistic Infections
Concept Escherichia coli Infections
Concept Meningococcal Infections
Concept HTLV-I Infections
Concept Infection Control
Concept Urinary Tract Infections
Concept Cross Infection
Concept Staphylococcal Infections
Concept Community-Acquired Infections
Concept Orthomyxoviridae Infections
Concept Pneumococcal Infections
Academic Article Targeting imperfect vaccines against drug-resistance determinants: a strategy for countering the rise of drug resistance.
Academic Article Population genomics of post-vaccine changes in pneumococcal epidemiology.
Academic Article Avian influenza: Ferret H7N9 flu model questioned.
Academic Article Geographic and temporal trends in antimicrobial nonsusceptibility in Streptococcus pneumoniae in the post-vaccine era in the United States.
Academic Article Using pneumococcal carriage data to monitor postvaccination changes in invasive disease.
Academic Article Within-host selection is limited by an effective population of Streptococcus pneumoniae during nasopharyngeal colonization.
Academic Article Surface charge of Streptococcus pneumoniae predicts serotype distribution.
Academic Article Within-host bacterial diversity hinders accurate reconstruction of transmission networks from genomic distance data.
Academic Article Development, calibration and performance of an HIV transmission model incorporating natural history and behavioral patterns: application in South Africa.
Academic Article Within-host whole-genome deep sequencing and diversity analysis of human respiratory syncytial virus infection reveals dynamics of genomic diversity in the absence and presence of immune pressure.
Academic Article The distribution of pairwise genetic distances: a tool for investigating disease transmission.
Academic Article Stability of the pneumococcal population structure in Massachusetts as PCV13 was introduced.
Academic Article Origin and proliferation of multiple-drug resistance in bacterial pathogens.
Academic Article Selective and genetic constraints on pneumococcal serotype switching.
Academic Article Carriage burden, multiple colonization and antibiotic pressure promote emergence of resistant vaccine escape pneumococci.
Academic Article The association of meningococcal disease with influenza in the United States, 1989-2009.
Academic Article How could preventive therapy affect the prevalence of drug resistance? Causes and consequences.
Academic Article A new approach to the analysis of antibiotic resistance data from hospitals.
Academic Article Estimating the hospitalization burden associated with influenza and respiratory syncytial virus in New York City, 2003-2011.
Academic Article Effect of Serotype on Pneumococcal Competition in a Mouse Colonization Model.
Academic Article Population genomic datasets describing the post-vaccine evolutionary epidemiology of Streptococcus pneumoniae.
Academic Article Impact of Host Heterogeneity on the Efficacy of Interventions to Reduce Staphylococcus aureus Carriage.
Academic Article Identifying the effect of patient sharing on between-hospital genetic differentiation of methicillin-resistant Staphylococcus aureus.
Academic Article Infectious Diseases Society of America and Gain-of-Function Experiments With Pathogens Having Pandemic Potential.
Academic Article How Can Vaccines Contribute to Solving the Antimicrobial Resistance Problem?
Academic Article Can the Heterosexual HIV Epidemic be Eliminated in South Africa Using Combination Prevention? A Modeling Analysis.
Grant Epidemiologic Methods: Resistant Nosocomial Infections
Academic Article Zika vaccine trials.
Academic Article Temporally Varying Relative Risks for Infectious Diseases: Implications for Infectious Disease Control.
Academic Article Association of Pneumococcal Protein Antigen Serology With Age and Antigenic Profile of Colonizing Isolates.
Academic Article Diverse evolutionary patterns of pneumococcal antigens identified by pangenome-wide immunological screening.
Academic Article Evolution of antibiotic resistance is linked to any genetic mechanism affecting bacterial duration of carriage.
Academic Article Vaccine testing for emerging infections: the case for individual randomisation.
Academic Article Displacement of sexual partnerships in trials of sexual behavior interventions: A model-based assessment of consequences.
Academic Article Host population structure and treatment frequency maintain balancing selection on drug resistance.
Academic Article Immunization, Antibiotic Use, and Pneumococcal Colonization Over a 15-Year Period.
Academic Article Pan-serotype Reduction in Progression of Streptococcus pneumoniae to Otitis Media After Rollout of Pneumococcal Conjugate Vaccines.
Academic Article On the Relative Role of Different Age Groups During Epidemics Associated With Respiratory Syncytial Virus.
Academic Article Serotype-specific immune responses to pneumococcal conjugate vaccine among children are significantly correlated by individual: Analysis of randomized controlled trial data.
Academic Article Antigenic Variation in Streptococcus pneumoniae PspC Promotes Immune Escape in the Presence of Variant-Specific Immunity.
Academic Article The impact of serotype-specific vaccination on phylodynamic parameters of Streptococcus pneumoniae and the pneumococcal pan-genome.
Academic Article Preprints: An underutilized mechanism to accelerate outbreak science.
Academic Article Impact of Antimicrobial Treatment for Acute Otitis Media on Carriage Dynamics of Penicillin-Susceptible and Penicillin-Nonsusceptible Streptococcus pneumoniae.
Academic Article The evolution of antibiotic resistance in a structured host population.
Academic Article Choices in vaccine trial design in epidemics of emerging infections.
Academic Article Use of an individual-based model of pneumococcal carriage for planning a randomized trial of a whole-cell vaccine.
Academic Article Analyzing Vaccine Trials in Epidemics With Mild and Asymptomatic Infection.
Academic Article Toward economic evaluation of the value of vaccines and other health technologies in addressing AMR.
Academic Article The distribution of antibiotic use and its association with antibiotic resistance.
Academic Article Estimating the proportion of bystander selection for antibiotic resistance among potentially pathogenic bacterial flora.
Academic Article Herd immunity alters the conditions for performing dose schedule comparisons: an individual-based model of pneumococcal carriage.
Academic Article Population genomics of pneumococcal carriage in Massachusetts children following introduction of PCV-13.
Academic Article Modelling the epidemiologic impact of achieving UNAIDS fast-track 90-90-90 and 95-95-95 targets in South Africa.
Academic Article Antimicrobial resistance prevalence, rates of hospitalization with septicemia and rates of mortality with sepsis in adults in different US states.
Academic Article On the evolutionary ecology of multidrug resistance in bacteria.
Academic Article Interaction Patterns of Men Who Have Sex With Men on a Geosocial Networking Mobile App in Seven United States Metropolitan Areas: Observational Study.
Academic Article Defining the Epidemiology of Covid-19 - Studies Needed.
Academic Article Aggregated mobility data could help fight COVID-19.
Academic Article Epidemiology of Covid-19. Reply.
Academic Article Human Challenge Studies to Accelerate Coronavirus Vaccine Licensure.
Academic Article Estimating clinical severity of COVID-19 from the transmission dynamics in Wuhan, China.
Academic Article Projecting the transmission dynamics of SARS-CoV-2 through the postpandemic period.
Academic Article Coronavirus: sampling now for future analysis.
Academic Article Temporal rise in the proportion of younger adults and older adolescents among coronavirus disease (COVID-19) cases following the introduction of physical distancing measures, Germany, March to April 2020.
Academic Article Estimated Demand for US Hospital Inpatient and Intensive Care Unit Beds for Patients With COVID-19 Based on Comparisons With Wuhan and Guangzhou, China.
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  • Infection
Funded by the NIH National Center for Advancing Translational Sciences through its Clinical and Translational Science Awards Program, grant number UL1TR002541.