Harvard Catalyst Profiles

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Alireza Akhondi-Asl, Ph.D.



Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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  1. Sansevere AJ, DiBacco ML, Akhondi-Asl A, LaRovere K, Loddenkemper T, Rivkin MJ, Thiagarajan RR, Pearl PL, Libenson MH, Tasker RC. EEG features of brain injury during extracorporeal membrane oxygenation in children. Neurology. 2020 Jul 06. PMID: 32631921.
  2. Akhondi-Asl A, Vonberg FW, Au CC, Tasker RC. Meaning of Intracranial Pressure-to-Blood Pressure Fisher-Transformed Pearson Correlation-Derived Optimal Cerebral Perfusion Pressure: Testing Empiric Utility in a Mechanistic Model. Crit Care Med. 2018 12; 46(12):e1160-e1166. PMID: 30239383.
  3. Velasco-Annis C, Akhondi-Asl A, Stamm A, Warfield SK. Reproducibility of Brain MRI Segmentation Algorithms: Empirical Comparison of Local MAP PSTAPLE, FreeSurfer, and FSL-FIRST. J Neuroimaging. 2018 03; 28(2):162-172. PMID: 29134725.
    Citations:    Fields:    
  4. Tasker RC, Akhondi-Asl A. Updating Evidence for Using Therapeutic Hypothermia in Pediatric Severe Traumatic Brain Injury. Crit Care Med. 2017 10; 45(10):e1091. PMID: 28915185.
    Citations:    Fields:    
  5. Hesper T, Bulat E, Bixby S, Akhondi-Asl A, Afacan O, Miller P, Bowen G, Warfield S, Kim YJ. Both 3-T dGEMRIC and Acetabular-Femoral T2 Difference May Detect Cartilage Damage at the Chondrolabral Junction. Clin Orthop Relat Res. 2017 Apr; 475(4):1058-1065. PMID: 27807678.
    Citations: 2     Fields:    Translation:Humans
  6. Tasker RC, Vonberg FW, Ulano ED, Akhondi-Asl A. Updating Evidence for Using Hypothermia in Pediatric Severe Traumatic Brain Injury: Conventional and Bayesian Meta-Analytic Perspectives. Pediatr Crit Care Med. 2017 Apr; 18(4):355-362. PMID: 28230712.
    Citations: 2     Fields:    Translation:Humans
  7. Gholipour A, Rollins CK, Velasco-Annis C, Ouaalam A, Akhondi-Asl A, Afacan O, Ortinau CM, Clancy S, Limperopoulos C, Yang E, Estroff JA, Warfield SK. A normative spatiotemporal MRI atlas of the fetal brain for automatic segmentation and analysis of early brain growth. Sci Rep. 2017 03 28; 7(1):476. PMID: 28352082.
    Citations: 4     Fields:    Translation:Humans
  8. Sánchez Fernández I, Peters JM, Akhondi-Asl A, Klehm J, Warfield SK, Loddenkemper T. Reduced thalamic volume in patients with Electrical Status Epilepticus in Sleep. Epilepsy Res. 2017 02; 130:74-80. PMID: 28160673.
    Citations:    Fields:    Translation:Humans
  9. Rollins CK, Asaro LA, Akhondi-Asl A, Kussman BD, Rivkin MJ, Bellinger DC, Warfield SK, Wypij D, Newburger JW, Soul JS. White Matter Volume Predicts Language Development in Congenital Heart Disease. J Pediatr. 2017 02; 181:42-48.e2. PMID: 27837950.
    Citations: 1     Fields:    Translation:Humans
  10. Tasker RC, Akhondi-Asl A. Targeted Temperature Management After Cardiac Arrest Due to Drowning: "Frequentist" and "Bayesian" Decision Making. Pediatr Crit Care Med. 2016 08; 17(8):789-91. PMID: 27500613.
    Citations:    Fields:    
  11. Akhondi-Asl A, Afacan O, Balasubramanian M, Mulkern RV, Warfield SK. Fast myelin water fraction estimation using 2D multislice CPMG. Magn Reson Med. 2016 10; 76(4):1301-13. PMID: 26536382.
    Citations: 3     Fields:    Translation:HumansCells
  12. Gorthi S, Akhondi-Asl A, Warfield SK. Optimal MAP Parameters Estimation in STAPLE Using Local Intensity Similarity Information. IEEE J Biomed Health Inform. 2015 Sep; 19(5):1589-97. PMID: 25955854.
    Citations:    Fields:    Translation:Humans
  13. Siversson C, Akhondi-Asl A, Bixby S, Kim YJ, Warfield SK. Three-dimensional hip cartilage quality assessment of morphology and dGEMRIC by planar maps and automated segmentation. Osteoarthritis Cartilage. 2014 Oct; 22(10):1511-5. PMID: 25278060.
    Citations: 6     Fields:    Translation:Humans
  14. Akhondi-Asl A, Hoyte L, Lockhart ME, Warfield SK. A logarithmic opinion pool based STAPLE algorithm for the fusion of segmentations with associated reliability weights. IEEE Trans Med Imaging. 2014 Oct; 33(10):1997-2009. PMID: 24951681.
    Citations: 9     Fields:    Translation:Humans
  15. Nazem-Zadeh MR, Schwalb JM, Elisevich KV, Bagher-Ebadian H, Hamidian H, Akhondi-Asl AR, Jafari-Khouzani K, Soltanian-Zadeh H. Lateralization of temporal lobe epilepsy using a novel uncertainty analysis of MR diffusion in hippocampus, cingulum, and fornix, and hippocampal volume and FLAIR intensity. J Neurol Sci. 2014 Jul 15; 342(1-2):152-61. PMID: 24857759.
    Citations: 6     Fields:    Translation:Humans
  16. Akhondi-Asl A, Afacan O, Mulkern RV, Warfield SK. T(2)-relaxometry for myelin water fraction extraction using wald distribution and extended phase graph. Med Image Comput Comput Assist Interv. 2014; 17(Pt 3):145-52. PMID: 25320793.
    Citations: 4     Fields:    Translation:HumansCells
  17. Gholipour A, Limperopoulos C, Clancy S, Clouchoux C, Akhondi-Asl A, Estroff JA, Warfield SK. Construction of a deformable spatiotemporal MRI atlas of the fetal brain: evaluation of similarity metrics and deformation models. Med Image Comput Comput Assist Interv. 2014; 17(Pt 2):292-9. PMID: 25485391.
    Citations: 8     Fields:    Translation:Humans
  18. Taimouri V, Akhondi-Asl A, Tomas-Fernandez X, Peters JM, Prabhu SP, Poduri A, Takeoka M, Loddenkemper T, Bergin AM, Harini C, Madsen JR, Warfield SK. Electrode localization for planning surgical resection of the epileptogenic zone in pediatric epilepsy. Int J Comput Assist Radiol Surg. 2014 Jan; 9(1):91-105. PMID: 23793723.
    Citations: 6     Fields:    Translation:Humans
  19. Akhondi-Asl A, Warfield SK. Simultaneous truth and performance level estimation through fusion of probabilistic segmentations. IEEE Trans Med Imaging. 2013 Oct; 32(10):1840-52. PMID: 23744673.
    Citations: 14     Fields:    Translation:Humans
  20. Scherrer B, Schwartzman A, Taquet M, Prabhu SP, Sahin M, Akhondi-Asl A, Warfield SK. Characterizing the distribution of anisotropic micro-structural environments with diffusion-weighted imaging (DIAMOND). Med Image Comput Comput Assist Interv. 2013; 16(Pt 3):518-26. PMID: 24505801.
    Citations: 6     Fields:    Translation:Cells
  21. Commowick O, Akhondi-Asl A, Warfield SK. Estimating a reference standard segmentation with spatially varying performance parameters: local MAP STAPLE. IEEE Trans Med Imaging. 2012 Aug; 31(8):1593-606. PMID: 22562727.
    Citations: 18     Fields:    Translation:Humans
  22. Akhondi-Asl A, Hans A, Scherrer B, Peters JM, Warfield SK. WHOLE BRAIN GROUP NETWORK ANALYSIS USING NETWORK BIAS AND VARIANCE PARAMETERS. Proc IEEE Int Symp Biomed Imaging. 2012 May; 2012:1511-1514. PMID: 26539256.
  23. Gholipour A, Akhondi-Asl A, Estroff JA, Warfield SK. Multi-atlas multi-shape segmentation of fetal brain MRI for volumetric and morphometric analysis of ventriculomegaly. Neuroimage. 2012 Apr 15; 60(3):1819-31. PMID: 22500924.
    Citations: 21     Fields:    Translation:Humans
  24. Akhondi-Asl A, Warfield SK. Estimation of the prior distribution of ground truth in the STAPLE algorithm: an empirical Bayesian approach. Med Image Comput Comput Assist Interv. 2012; 15(Pt 1):593-600. PMID: 23285600.
    Citations: 3     Fields:    Translation:Humans
  25. Akhondi-Asl A, Soltanian-Zadeh H. Two-stage multishape segmentation of brain structures using image intensity, tissue type, and location informationa). Med Phys. 2010 Aug; 37(8):4501-4516. PMID: 28524325.
  26. Akhondi-Asl A, Soltanian-Zadeh H. Two-stage multishape segmentation of brain structures using image intensity, tissue type, and location information. Med Phys. 2010 Aug; 37(8):4501-16. PMID: 20879609.
    Citations: 2     Fields:    Translation:Humans
  27. Mahmoudi SE, Akhondi-Asl A, Rahmani R, Faghih-Roohi S, Taimouri V, Sabouri A, Soltanian-Zadeh H. Web-based interactive 2D/3D medical image processing and visualization software. Comput Methods Programs Biomed. 2010 May; 98(2):172-82. PMID: 20022133.
    Citations: 7     Fields:    Translation:Humans
  28. Akhondi-Asl A, Jafari-Khouzani K, Elisevich K, Soltanian-Zadeh H. Hippocampal volumetry for lateralization of temporal lobe epilepsy: automated versus manual methods. Neuroimage. 2011 Jan; 54 Suppl 1:S218-26. PMID: 20353827.
    Citations: 17     Fields:    Translation:Humans
  29. Bijari PB, Akhondi-Asl A, Soltanian-Zadeh H. Three-dimensional coupled-object segmentation using symmetry and tissue type information. Comput Med Imaging Graph. 2010 Apr; 34(3):236-49. PMID: 19932598.
    Citations: 1     Fields:    Translation:Humans
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Funded by the NIH National Center for Advancing Translational Sciences through its Clinical and Translational Science Awards Program, grant number UL1TR002541.