Contact, publication, and social network information about Harvard faculty and fellows. Harvard Catalyst Profiles
Keywords
Last Name
Institution

profileRuslan Sadreyev, Ph.D.

TitleInstructor in Pathology
InstitutionMassachusetts General Hospital
DepartmentPathology
AddressMassachusetts General Hospital
Molecular Bio, CPZN 7
185 Cambridge St
Boston MA 02114
Phone617/643-5697
vCardDownload vCard (login for email)

Collapse Research 
Collapse research resources
This researcher has shared information about their research resources
in the eagle-i Network. To update or add resource records, contact
eagle-i@hms.harvard.edu.
NextGen Sequencing Core (MGH) - Core services (3), Instruments (3) and Protocols (18)

Collapse Bibliographic 
Collapse selected publications
Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
List All   |   Timeline
  1. Savol AJ, Wang PI, Jeon Y, Colognori D, Yildirim E, Pinter SF, Payer B, Lee JT, Sadreyev RI. Genome-wide identification of autosomal genes with allelic imbalance of chromatin state. PLoS One. 2017; 12(8):e0182568. PMID: 28796844.
    View in: PubMed
  2. Hata AN, Rowley S, Archibald HL, Gomez-Caraballo M, Siddiqui FM, Ji F, Jung J, Light M, Lee JS, Debussche L, Sidhu S, Sadreyev RI, Watters J, Engelman JA. Synergistic activity and heterogeneous acquired resistance of combined MDM2 and MEK inhibition in KRAS mutant cancers. Oncogene. 2017 Aug 07. PMID: 28783173.
    View in: PubMed
  3. Dai N, Ji F, Wright J, Minichiello L, Sadreyev R, Avruch J. IGF2 mRNA binding protein-2 is a tumor promoter that drives cancer proliferation through its client mRNAs IGF2 and HMGA1. Elife. 2017 Jul 28; 6. PMID: 28753127.
    View in: PubMed
  4. Choi J, Huebner AJ, Clement K, Walsh RM, Savol A, Lin K, Gu H, Di Stefano B, Brumbaugh J, Kim SY, Sharif J, Rose CM, Mohammad A, Odajima J, Charron J, Shioda T, Gnirke A, Gygi S, Koseki H, Sadreyev RI, Xiao A, Meissner A, Hochedlinger K. Prolonged Mek1/2 suppression impairs the developmental potential of embryonic stem cells. Nature. 2017 Aug 10; 548(7666):219-223. PMID: 28746311.
    View in: PubMed
  5. Chu HP, Froberg JE, Kesner B, Oh HJ, Ji F, Sadreyev R, Pinter SF, Lee JT. PAR-TERRA directs homologous sex chromosome pairing. Nat Struct Mol Biol. 2017 Aug; 24(8):620-631. PMID: 28692038.
    View in: PubMed
  6. Walsh RM, Shen EY, Bagot RC, Anselmo A, Jiang Y, Javidfar B, Wojtkiewicz GJ, Cloutier J, Chen JW, Sadreyev R, Nestler EJ, Akbarian S, Hochedlinger K. Phf8 loss confers resistance to depression-like and anxiety-like behaviors in mice. Nat Commun. 2017 May 09; 8:15142. PMID: 28485378.
    View in: PubMed
  7. Pym E, Sasidharan N, Thompson-Peer KL, Simon DJ, Anselmo A, Sadreyev R, Hall Q, Nurrish S, Kaplan JM. Shank is a dose-dependent regulator of Cav1 calcium current and CREB target expression. Elife. 2017 May 06; 6. PMID: 28477407.
    View in: PubMed
  8. Hulsmans M, Clauss S, Xiao L, Aguirre AD, King KR, Hanley A, Hucker WJ, Wülfers EM, Seemann G, Courties G, Iwamoto Y, Sun Y, Savol AJ, Sager HB, Lavine KJ, Fishbein GA, Capen DE, Da Silva N, Miquerol L, Wakimoto H, Seidman CE, Seidman JG, Sadreyev RI, Naxerova K, Mitchell RN, Brown D, Libby P, Weissleder R, Swirski FK, Kohl P, Vinegoni C, Milan DJ, Ellinor PT, Nahrendorf M. Macrophages Facilitate Electrical Conduction in the Heart. Cell. 2017 Apr 20; 169(3):510-522.e20. PMID: 28431249.
    View in: PubMed
  9. Strle K, Sulka KB, Pianta A, Crowley JT, Arvikar SL, Anselmo A, Sadreyev R, Steere AC. T-Helper 17 Cell Cytokine Responses in Lyme Disease Correlate With Borrelia burgdorferi Antibodies During Early Infection and With Autoantibodies Late in the Illness in Patients With Antibiotic-Refractory Lyme Arthritis. Clin Infect Dis. 2017 Apr 01; 64(7):930-938. PMID: 28077518.
    View in: PubMed
  10. Choi J, Clement K, Huebner AJ, Webster J, Rose CM, Brumbaugh J, Walsh RM, Lee S, Savol A, Etchegaray JP, Gu H, Boyle P, Elling U, Mostoslavsky R, Sadreyev R, Park PJ, Gygi SP, Meissner A, Hochedlinger K. DUSP9 Modulates DNA Hypomethylation in Female Mouse Pluripotent Stem Cells. Cell Stem Cell. 2017 May 04; 20(5):706-719.e7. PMID: 28366588.
    View in: PubMed
  11. Lau MS, Schwartz MG, Kundu S, Savol AJ, Wang PI, Marr SK, Grau DJ, Schorderet P, Sadreyev RI, Tabin CJ, Kingston RE. Mutation of a nucleosome compaction region disrupts Polycomb-mediated axial patterning. Science. 2017 03 10; 355(6329):1081-1084. PMID: 28280206.
    View in: PubMed
  12. Mehta S, Cronkite DA, Basavappa M, Saunders TL, Adiliaghdam F, Amatullah H, Morrison SA, Pagan JD, Anthony RM, Tonnerre P, Lauer GM, Lee JC, Digumarthi S, Pantano L, Ho Sui SJ, Ji F, Sadreyev R, Zhou C, Mullen AC, Kumar V, Li Y, Wijmenga C, Xavier RJ, Means TK, Jeffrey KL. Maintenance of macrophage transcriptional programs and intestinal homeostasis by epigenetic reader SP140. Sci Immunol. 2017 Mar 03; 2(9). PMID: 28783698.
    View in: PubMed
  13. Mueller B, Mieczkowski J, Kundu S, Wang P, Sadreyev R, Tolstorukov MY, Kingston RE. Widespread changes in nucleosome accessibility without changes in nucleosome occupancy during a rapid transcriptional induction. Genes Dev. 2017 Mar 01; 31(5):451-462. PMID: 28356342.
    View in: PubMed
  14. Wein MN, Liang Y, Goransson O, Sundberg TB, Wang J, Williams EA, O'Meara MJ, Govea N, Beqo B, Nishimori S, Nagano K, Brooks DJ, Martins JS, Corbin B, Anselmo A, Sadreyev R, Wu JY, Sakamoto K, Foretz M, Xavier RJ, Baron R, Bouxsein ML, Gardella TJ, Divieti-Pajevic P, Gray NS, Kronenberg HM. Corrigendum: SIKs control osteocyte responses to parathyroid hormone. Nat Commun. 2017 Feb 22; 8:14745. PMID: 28224982.
    View in: PubMed
  15. Fusco DN, Pratt H, Kandilas S, Cheon SS, Lin W, Cronkite DA, Basavappa M, Jeffrey KL, Anselmo A, Sadreyev R, Yapp C, Shi X, O'Sullivan JF, Gerszten RE, Tomaru T, Yoshino S, Satoh T, Chung RT. HELZ2 Is an IFN Effector Mediating Suppression of Dengue Virus. Front Microbiol. 2017; 8:240. PMID: 28265266.
    View in: PubMed
  16. Kundu S, Ji F, Sunwoo H, Jain G, Lee JT, Sadreyev RI, Dekker J, Kingston RE. Polycomb Repressive Complex 1 Generates Discrete Compacted Domains that Change during Differentiation. Mol Cell. 2017 Feb 02; 65(3):432-446.e5. PMID: 28157505.
    View in: PubMed
  17. Lehrbach NJ, Ji F, Sadreyev R. Next-Generation Sequencing for Identification of EMS-Induced Mutations in Caenorhabditis elegans. Curr Protoc Mol Biol. 2017 Jan 05; 117:7.29.1-7.29.12. PMID: 28060408.
    View in: PubMed
  18. Gregory KE, Samuel BS, Houghteling P, Shan G, Ausubel FM, Sadreyev RI, Walker WA. Influence of maternal breast milk ingestion on acquisition of the intestinal microbiome in preterm infants. Microbiome. 2016 Dec 30; 4(1):68. PMID: 28034306.
    View in: PubMed
  19. Joh RI, Khanduja JS, Calvo IA, Mistry M, Palmieri CM, Savol AJ, Ho Sui SJ, Sadreyev RI, Aryee MJ, Motamedi M. Survival in Quiescence Requires the Euchromatic Deployment of Clr4/SUV39H by Argonaute-Associated Small RNAs. Mol Cell. 2016 Dec 15; 64(6):1088-1101. PMID: 27984744.
    View in: PubMed
  20. McEwan DL, Feinbaum RL, Stroustrup N, Haas W, Conery AL, Anselmo A, Sadreyev R, Ausubel FM. Tribbles ortholog NIPI-3 and bZIP transcription factor CEBP-1 regulate a Caenorhabditis elegans intestinal immune surveillance pathway. BMC Biol. 2016 Dec 07; 14(1):105. PMID: 27927200.
    View in: PubMed
  21. Moore JC, Tang Q, Yordán NT, Moore FE, Garcia EG, Lobbardi R, Ramakrishnan A, Marvin DL, Anselmo A, Sadreyev RI, Langenau DM. Single-cell imaging of normal and malignant cell engraftment into optically clear prkdc-null SCID zebrafish. J Exp Med. 2016 Nov 14; 213(12):2575-2589. PMID: 27810924.
    View in: PubMed
  22. Wein MN, Liang Y, Goransson O, Sundberg TB, Wang J, Williams EA, O'Meara MJ, Govea N, Beqo B, Nishimori S, Nagano K, Brooks DJ, Martins JS, Corbin B, Anselmo A, Sadreyev R, Wu JY, Sakamoto K, Foretz M, Xavier RJ, Baron R, Bouxsein ML, Gardella TJ, Divieti-Pajevic P, Gray NS, Kronenberg HM. SIKs control osteocyte responses to parathyroid hormone. Nat Commun. 2016 Oct 19; 7:13176. PMID: 27759007.
    View in: PubMed
  23. Sykes DB, Kfoury YS, Mercier FE, Wawer MJ, Law JM, Haynes MK, Lewis TA, Schajnovitz A, Jain E, Lee D, Meyer H, Pierce KA, Tolliday NJ, Waller A, Ferrara SJ, Eheim AL, Stoeckigt D, Maxcy KL, Cobert JM, Bachand J, Szekely BA, Mukherjee S, Sklar LA, Kotz JD, Clish CB, Sadreyev RI, Clemons PA, Janzer A, Schreiber SL, Scadden DT. Inhibition of Dihydroorotate Dehydrogenase Overcomes Differentiation Blockade in Acute Myeloid Leukemia. Cell. 2016 Sep 22; 167(1):171-186.e15. PMID: 27641501.
    View in: PubMed
  24. Moore JC, Mulligan TS, Torres Yordán N, Castranova D, Pham VN, Tang Q, Lobbardi R, Anselmo A, Liwski RS, Berman JN, Sadreyev RI, Weinstein BM, Langenau DM. T cell immune deficiency in zap70 mutant zebrafish. Mol Cell Biol. 2016 Sep 06. PMID: 27601584.
    View in: PubMed
  25. Sarkar A, Huebner AJ, Sulahian R, Anselmo A, Xu X, Flattery K, Desai N, Sebastian C, Yram MA, Arnold K, Rivera M, Mostoslavsky R, Bronson R, Bass AJ, Sadreyev R, Shivdasani RA, Hochedlinger K. Sox2 Suppresses Gastric Tumorigenesis in Mice. Cell Rep. 2016 Aug 16; 16(7):1929-41. PMID: 27498859.
    View in: PubMed
  26. Ray MK, Wiskow O, King MJ, Ismail N, Ergun A, Wang Y, Plys AJ, Davis CP, Kathrein K, Sadreyev R, Borowsky ML, Eggan K, Zon L, Galloway JL, Kingston RE. CAT7 and cat7l Long Non-coding RNAs Tune Polycomb Repressive Complex 1 Function during Human and Zebrafish Development. J Biol Chem. 2016 Sep 09; 291(37):19558-72. PMID: 27405765; PMCID: PMC5016691 [Available on 09/09/17].
  27. Deaton AM, Go´mez-Rodri´guez M, Mieczkowski J, Tolstorukov MY, Kundu S, Sadreyev RI, Jansen LE, Kingston RE. Enhancer regions show high histone H3.3 turnover that changes during differentiation. Elife. 2016 Jun 15; 5. PMID: 27304074; PMCID: PMC4965263.
  28. Kugel S, Sebastián C, Fitamant J, Ross KN, Saha SK, Jain E, Gladden A, Arora KS, Kato Y, Rivera MN, Ramaswamy S, Sadreyev RI, Goren A, Deshpande V, Bardeesy N, Mostoslavsky R. SIRT6 Suppresses Pancreatic Cancer through Control of Lin28b. Cell. 2016 Jun 02; 165(6):1401-1415. PMID: 27180906; PMCID: PMC4892983 [Available on 06/02/17].
  29. Moore FE, Garcia EG, Lobbardi R, Jain E, Tang Q, Moore JC, Cortes M, Molodtsov A, Kasheta M, Luo CC, Garcia AJ, Mylvaganam R, Yoder JA, Blackburn JS, Sadreyev RI, Ceol CJ, North TE, Langenau DM. Single-cell transcriptional analysis of normal, aberrant, and malignant hematopoiesis in zebrafish. J Exp Med. 2016 May 30; 213(6):979-92. PMID: 27139488; PMCID: PMC4886368 [Available on 11/30/16].
  30. Bukhari SIA, Truesdell SS, Lee S, Kollu S, Classon A, Boukhali M, Jain E, Mortensen RD, Yanagiya A, Sadreyev RI, Haas W, Vasudevan S. A Specialized Mechanism of Translation Mediated by FXR1a-Associated MicroRNP in Cellular Quiescence. Mol Cell. 2016 Mar 03; 61(5):760-773. PMID: 26942679; PMCID: PMC4811377 [Available on 03/03/17].
  31. Nishikawa JL, Boeszoermenyi A, Vale-Silva LA, Torelli R, Posteraro B, Sohn YJ, Ji F, Gelev V, Sanglard D, Sanguinetti M, Sadreyev RI, Mukherjee G, Bhyravabhotla J, Buhrlage SJ, Gray NS, Wagner G, Näär AM, Arthanari H. Inhibiting fungal multidrug resistance by disrupting an activator-Mediator interaction. Nature. 2016 Feb 25; 530(7591):485-9. PMID: 26886795; PMCID: PMC4860947.
  32. Hata AN, Niederst MJ, Archibald HL, Gomez-Caraballo M, Siddiqui FM, Mulvey HE, Maruvka YE, Ji F, Bhang HE, Krishnamurthy Radhakrishna V, Siravegna G, Hu H, Raoof S, Lockerman E, Kalsy A, Lee D, Keating CL, Ruddy DA, Damon LJ, Crystal AS, Costa C, Piotrowska Z, Bardelli A, Iafrate AJ, Sadreyev RI, Stegmeier F, Getz G, Sequist LV, Faber AC, Engelman JA. Tumor cells can follow distinct evolutionary paths to become resistant to epidermal growth factor receptor inhibition. Nat Med. 2016 Mar; 22(3):262-9. PMID: 26828195; PMCID: PMC4900892.
  33. Wani AH, Boettiger AN, Schorderet P, Ergun A, Münger C, Sadreyev RI, Zhuang X, Kingston RE, Francis NJ. Chromatin topology is coupled to Polycomb group protein subnuclear organization. Nat Commun. 2016 Jan 13; 7:10291. PMID: 26759081; PMCID: PMC4735512.
  34. Varmeh S, Vanden Borre P, Gunda V, Brauner E, Holm T, Wang Y, Sadreyev RI, Parangi S. Genome-wide analysis of differentially expressed miRNA in PLX4720-resistant and parental human thyroid cancer cell lines. Surgery. 2016 Jan; 159(1):152-62. PMID: 26456124; PMCID: PMC4688239 [Available on 01/01/17].
  35. Tong J, Sadreyev RI, Pei J, Kinch LN, Grishin NV. Using homology relations within a database markedly boosts protein sequence similarity search. Proc Natl Acad Sci U S A. 2015 Jun 02; 112(22):7003-8. PMID: 26038555; PMCID: PMC4460465.
  36. Pinter SF, Colognori D, Beliveau BJ, Sadreyev RI, Payer B, Yildirim E, Wu CT, Lee JT. Allelic Imbalance Is a Prevalent and Tissue-Specific Feature of the Mouse Transcriptome. Genetics. 2015 Jun; 200(2):537-49. PMID: 25858912; PMCID: PMC4492378.
  37. Sarma K, Cifuentes-Rojas C, Ergun A, Del Rosario A, Jeon Y, White F, Sadreyev R, Lee JT. ATRX directs binding of PRC2 to Xist RNA and Polycomb targets. Cell. 2014 Nov 06; 159(4):869-83. PMID: 25417162; PMCID: PMC4379047.
  38. West JA, Davis CP, Sunwoo H, Simon MD, Sadreyev RI, Wang PI, Tolstorukov MY, Kingston RE. The long noncoding RNAs NEAT1 and MALAT1 bind active chromatin sites. Mol Cell. 2014 Sep 04; 55(5):791-802. PMID: 25155612; PMCID: PMC4428586.
  39. Bowman SK, Deaton AM, Domingues H, Wang PI, Sadreyev RI, Kingston RE, Bender W. H3K27 modifications define segmental regulatory domains in the Drosophila bithorax complex. Elife. 2014 Jul 31; 3:e02833. PMID: 25082344; PMCID: PMC4139060.
  40. Broering TJ, Alavattam KG, Sadreyev RI, Ichijima Y, Kato Y, Hasegawa K, Camerini-Otero RD, Lee JT, Andreassen PR, Namekawa SH. BRCA1 establishes DNA damage signaling and pericentric heterochromatin of the X chromosome in male meiosis. J Cell Biol. 2014 Jun 09; 205(5):663-75. PMID: 24914237; PMCID: PMC4050732.
  41. Sadreyev RI. Informatics for molecular biologists. Curr Protoc Mol Biol. 2014 Apr 14; 106:19.0.1-2. PMID: 24733239.
    View in: PubMed
  42. Sadreyev RI, Yildirim E, Pinter SF, Lee JT. Bimodal quantitative relationships between histone modifications for X-linked and autosomal loci. Proc Natl Acad Sci U S A. 2013 Apr 23; 110(17):6949-54. PMID: 23564346; PMCID: PMC3637770.
  43. Yildirim E, Kirby JE, Brown DE, Mercier FE, Sadreyev RI, Scadden DT, Lee JT. Xist RNA is a potent suppressor of hematologic cancer in mice. Cell. 2013 Feb 14; 152(4):727-42. PMID: 23415223; PMCID: PMC3875356.
  44. Pinter SF, Sadreyev RI, Yildirim E, Jeon Y, Ohsumi TK, Borowsky M, Lee JT. Spreading of X chromosome inactivation via a hierarchy of defined Polycomb stations. Genome Res. 2012 Oct; 22(10):1864-76. PMID: 22948768; PMCID: PMC3460182.
  45. Anguera MC, Sadreyev R, Zhang Z, Szanto A, Payer B, Sheridan SD, Kwok S, Haggarty SJ, Sur M, Alvarez J, Gimelbrant A, Mitalipova M, Kirby JE, Lee JT. Molecular signatures of human induced pluripotent stem cells highlight sex differences and cancer genes. Cell Stem Cell. 2012 Jul 06; 11(1):75-90. PMID: 22770242; PMCID: PMC3587778.
  46. Yildirim E, Sadreyev RI, Pinter SF, Lee JT. X-chromosome hyperactivation in mammals via nonlinear relationships between chromatin states and transcription. Nat Struct Mol Biol. 2011 Dec 04; 19(1):56-61. PMID: 22139016; PMCID: PMC3732781.
  47. Spencer RJ, del Rosario BC, Pinter SF, Lessing D, Sadreyev RI, Lee JT. A boundary element between Tsix and Xist binds the chromatin insulator Ctcf and contributes to initiation of X-chromosome inactivation. Genetics. 2011 Oct; 189(2):441-54. PMID: 21840866; PMCID: PMC3189804.
  48. Sun S, Fukue Y, Nolen L, Sadreyev R, Lee JT. Characterization of Xpr (Xpct) reveals instability but no effects on X-chromosome pairing or Xist expression. Transcription. 2010 Jul-Aug; 1(1):46-56. PMID: 21327163; PMCID: PMC3035190.
  49. Sadreyev RI, Wang Y, Grishin NV. Considering scores between unrelated proteins in the search database improves profile comparison. BMC Bioinformatics. 2009 Dec 04; 10:399. PMID: 19961610; PMCID: PMC3087343.
  50. Sadreyev RI, Feramisco JD, Tsao H, Grishin NV. Phenotypic categorization of genetic skin diseases reveals new relations between phenotypes, genes and pathways. Bioinformatics. 2009 Nov 15; 25(22):2891-6. PMID: 19744994; PMCID: PMC2773259.
  51. Feramisco JD, Sadreyev RI, Murray ML, Grishin NV, Tsao H. Phenotypic and genotypic analyses of genetic skin disease through the Online Mendelian Inheritance in Man (OMIM) database. J Invest Dermatol. 2009 Nov; 129(11):2628-36. PMID: 19536140.
    View in: PubMed
  52. Wang Y, Sadreyev RI, Grishin NV. PROCAIN server for remote protein sequence similarity search. Bioinformatics. 2009 Aug 15; 25(16):2076-7. PMID: 19497935; PMCID: PMC2723001.
  53. Sadreyev RI, Kim BH, Grishin NV. Discrete-continuous duality of protein structure space. Curr Opin Struct Biol. 2009 Jun; 19(3):321-8. PMID: 19482467; PMCID: PMC3688466.
  54. Sadreyev RI, Tang M, Kim BH, Grishin NV. COMPASS server for homology detection: improved statistical accuracy, speed and functionality. Nucleic Acids Res. 2009 Jul; 37(Web Server issue):W90-4. PMID: 19435884; PMCID: PMC2703893.
  55. Shi S, Pei J, Sadreyev RI, Kinch LN, Majumdar I, Tong J, Cheng H, Kim BH, Grishin NV. Analysis of CASP8 targets, predictions and assessment methods. Database (Oxford). 2009; 2009:bap003. PMID: 20157476.
    View in: PubMed
  56. Wang Y, Sadreyev RI, Grishin NV. PROCAIN: protein profile comparison with assisting information. Nucleic Acids Res. 2009 Jun; 37(11):3522-30. PMID: 19357092; PMCID: PMC2699500.
  57. Sadreyev RI, Shi S, Baker D, Grishin NV. Structure similarity measure with penalty for close non-equivalent residues. Bioinformatics. 2009 May 15; 25(10):1259-63. PMID: 19321733; PMCID: PMC2677741.
  58. Raman S, Vernon R, Thompson J, Tyka M, Sadreyev R, Pei J, Kim D, Kellogg E, DiMaio F, Lange O, Kinch L, Sheffler W, Kim BH, Das R, Grishin NV, Baker D. Structure prediction for CASP8 with all-atom refinement using Rosetta. Proteins. 2009; 77 Suppl 9:89-99. PMID: 19701941; PMCID: PMC3688471.
  59. Sadreyev RI, Grishin NV. Accurate statistical model of comparison between multiple sequence alignments. Nucleic Acids Res. 2008 Apr; 36(7):2240-8. PMID: 18285364; PMCID: PMC2367703.
  60. Qi Y, Sadreyev RI, Wang Y, Kim BH, Grishin NV. A comprehensive system for evaluation of remote sequence similarity detection. BMC Bioinformatics. 2007 Aug 28; 8:314. PMID: 17725841; PMCID: PMC2031906.
  61. Sadreyev RI, Tang M, Kim BH, Grishin NV. COMPASS server for remote homology inference. Nucleic Acids Res. 2007 Jul; 35(Web Server issue):W653-8. PMID: 17517780; PMCID: PMC1933213.
  62. Krishna SS, Sadreyev RI, Grishin NV. A tale of two ferredoxins: sequence similarity and structural differences. BMC Struct Biol. 2006 Apr 09; 6:8. PMID: 16603087; PMCID: PMC1459171.
  63. Sadreyev RI, Grishin NV. Exploring dynamics of protein structure determination and homology-based prediction to estimate the number of superfamilies and folds. BMC Struct Biol. 2006 Mar 20; 6:6. PMID: 16549009; PMCID: PMC1444916.
  64. Kim BH, Sadreyev R, Grishin NV. COG4849 is a novel family of nucleotidyltransferases. J Mol Recognit. 2005 Sep-Oct; 18(5):422-5. PMID: 15983981.
    View in: PubMed
  65. Sadreyev RI, Grishin NV. Estimates of statistical significance for comparison of individual positions in multiple sequence alignments. BMC Bioinformatics. 2004 Aug 05; 5:106. PMID: 15296518; PMCID: PMC516024.
  66. Sadreyev RI, Grishin NV. Quality of alignment comparison by COMPASS improves with inclusion of diverse confident homologs. Bioinformatics. 2004 Apr 12; 20(6):818-28. PMID: 14751996.
    View in: PubMed
  67. Sadreyev RI, Baker D, Grishin NV. Profile-profile comparisons by COMPASS predict intricate homologies between protein families. Protein Sci. 2003 Oct; 12(10):2262-72. PMID: 14500884; PMCID: PMC2366929.
  68. Mittelman D, Sadreyev R, Grishin N. Probabilistic scoring measures for profile-profile comparison yield more accurate short seed alignments. Bioinformatics. 2003 Aug 12; 19(12):1531-9. PMID: 12912834.
    View in: PubMed
  69. Pei J, Sadreyev R, Grishin NV. PCMA: fast and accurate multiple sequence alignment based on profile consistency. Bioinformatics. 2003 Feb 12; 19(3):427-8. PMID: 12584134.
    View in: PubMed
  70. Sadreyev R, Grishin N. COMPASS: a tool for comparison of multiple protein alignments with assessment of statistical significance. J Mol Biol. 2003 Feb 07; 326(1):317-36. PMID: 12547212.
    View in: PubMed
  71. Kinch LN, Wrabl JO, Krishna SS, Majumdar I, Sadreyev RI, Qi Y, Pei J, Cheng H, Grishin NV. CASP5 assessment of fold recognition target predictions. Proteins. 2003; 53 Suppl 6:395-409. PMID: 14579328.
    View in: PubMed
  72. Sadreyev RI, Panchin YV. Effects of glutamate agonists on the isolated neurons from the locomotor network of the mollusc Clione limacina. Neuroreport. 2002 Dec 03; 13(17):2235-9. PMID: 12488803.
    View in: PubMed
  73. Sadreyev RI, Panchin YV. The role of putative glutamatergic neurons and their connections in the locomotor central pattern generator of the mollusk, Clione limacina. Comp Biochem Physiol A Mol Integr Physiol. 2000 Jun; 126(2):193-202. PMID: 10936759.
    View in: PubMed
  74. Arshavsky YI, Deliagina TG, Orlovsky GN, Panchin YV, Popova LB, Sadreyev RI. Analysis of the central pattern generator for swimming in the mollusk Clione. Ann N Y Acad Sci. 1998 Nov 16; 860:51-69. PMID: 9928301.
    View in: PubMed
  75. Panchin YV, Sadreyev RI. Effects of acetylcholine and glutamate on isolated neurons of locomotory network of Clione. Neuroreport. 1997 Sep 08; 8(13):2897-901. PMID: 9376527.
    View in: PubMed
Local representatives can answer questions about the Profiles website or help with editing a profile or issues with profile data. For assistance with this profile: HMS/HSDM faculty should contact feedbackcatalyst.harvard.edu. For faculty or fellow appointment updates and changes, please ask your appointing department to contact HMS. For fellow personal and demographic information, contact HMS Human Resources at human_resourceshms.harvard.edu. For faculty personal and demographic information, contact HMS Office for Faculty Affairs at facappthms.harvard.edu.
Sadreyev's Networks
Click the "See All" links for more information and interactive visualizations!
Concepts Expand Description
_
Co-Authors Expand Description
_
Similar People Expand Description
_
Same Department Expand Description
Physical Neighbors Expand Description
_