Harvard Catalyst Profiles

Contact, publication, and social network information about Harvard faculty and fellows.

Debora Marks, Ph.D.

Co-Author

This page shows the publications co-authored by Debora Marks and Christin Sander.
Connection Strength

2.963
  1. Protein structure prediction from sequence variation. Nat Biotechnol. 2012 Nov; 30(11):1072-80.
    View in: PubMed
    Score: 0.518
  2. Protein 3D structure computed from evolutionary sequence variation. PLoS One. 2011; 6(12):e28766.
    View in: PubMed
    Score: 0.487
  3. Protein design and variant prediction using autoregressive generative models. Nat Commun. 2021 04 23; 12(1):2403.
    View in: PubMed
    Score: 0.233
  4. CellBox: Interpretable Machine Learning for Perturbation Biology with Application to the Design of Cancer Combination Therapy. Cell Syst. 2021 02 17; 12(2):128-140.e4.
    View in: PubMed
    Score: 0.228
  5. Protein Structure from Experimental Evolution. Cell Syst. 2020 01 22; 10(1):15-24.e5.
    View in: PubMed
    Score: 0.212
  6. Inferring protein 3D structure from deep mutation scans. Nat Genet. 2019 07; 51(7):1170-1176.
    View in: PubMed
    Score: 0.205
  7. The EVcouplings Python framework for coevolutionary sequence analysis. Bioinformatics. 2019 05 01; 35(9):1582-1584.
    View in: PubMed
    Score: 0.203
  8. Mutation effects predicted from sequence co-variation. Nat Biotechnol. 2017 02; 35(2):128-135.
    View in: PubMed
    Score: 0.173
  9. Structured States of Disordered Proteins from Genomic Sequences. Cell. 2016 Sep 22; 167(1):158-170.e12.
    View in: PubMed
    Score: 0.170
  10. 3D RNA and Functional Interactions from Evolutionary Couplings. Cell. 2016 May 05; 165(4):963-75.
    View in: PubMed
    Score: 0.165
  11. Sequence co-evolution gives 3D contacts and structures of protein complexes. Elife. 2014 Sep 25; 3.
    View in: PubMed
    Score: 0.148
  12. Three-dimensional structures of membrane proteins from genomic sequencing. Cell. 2012 Jun 22; 149(7):1607-21.
    View in: PubMed
    Score: 0.125
  13. All-atom 3D structure prediction of transmembrane ß-barrel proteins from sequences. Proc Natl Acad Sci U S A. 2015 Apr 28; 112(17):5413-8.
    View in: PubMed
    Score: 0.038
  14. PconsFold: improved contact predictions improve protein models. Bioinformatics. 2014 Sep 01; 30(17):i482-8.
    View in: PubMed
    Score: 0.037
  15. MicroRNA profiling of the murine hematopoietic system. Genome Biol. 2005; 6(8):R71.
    View in: PubMed
    Score: 0.020
Connection Strength
The connection strength for co-authors is the sum of the scores for each of their shared publications.

Publication scores are based on many factors, including how long ago they were written and whether the person is a first or senior author.
Funded by the NIH National Center for Advancing Translational Sciences through its Clinical and Translational Science Awards Program, grant number UL1TR002541.