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profileSonia Marie Aurore Pujol, PH.D.

TitleInstructor in Radiology
InstitutionBrigham and Women's Hospital
DepartmentRadiology
AddressBrigham and Women's Hospital
Radiology, L1-050
75 Francis St
Boston MA 02115
Phone617/732-7389
Fax617/582-6033
vCardDownload vCard (login for email)

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Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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  1. Pujol S, Cabeen R, Sébille SB, Yelnik J, François C, Fernandez Vidal S, Karachi C, Zhao Y, Cosgrove GR, Jannin P, Kikinis R, Bardinet E. In vivo Exploration of the Connectivity between the Subthalamic Nucleus and the Globus Pallidus in the Human Brain Using Multi-Fiber Tractography. Front Neuroanat. 2016; 10:119. PMID: 28154527.
    View in: PubMed
  2. Kapur T, Pieper S, Fedorov A, Fillion-Robin JC, Halle M, O'Donnell L, Lasso A, Ungi T, Pinter C, Finet J, Pujol S, Jagadeesan J, Tokuda J, Norton I, Estepar RS, Gering D, Aerts HJ, Jakab M, Hata N, Ibanez L, Blezek D, Miller J, Aylward S, Grimson WE, Fichtinger G, Wells WM, Lorensen WE, Schroeder W, Kikinis R. Increasing the impact of medical image computing using community-based open-access hackathons: The NA-MIC and 3D Slicer experience. Med Image Anal. 2016 Oct; 33:176-80. PMID: 27498015; PMCID: PMC5003088 [Available on 10/01/17].
  3. Liu S, Cai W, Pujol S, Kikinis R, Feng DD. Cross-View Neuroimage Pattern Analysis in Alzheimer's Disease Staging. Front Aging Neurosci. 2016; 8:23. PMID: 26941639; PMCID: PMC4763344.
  4. Pujol S, Baldwin M, Nassiri J, Kikinis R, Shaffer K. Using 3D Modeling Techniques to Enhance Teaching of Difficult Anatomical Concepts. Acad Radiol. 2016 Apr; 23(4):507-16. PMID: 26897601; PMCID: PMC4808571.
  5. Zhang F, Song Y, Cai W, Hauptmann AG, Liu S, Pujol S, Kikinis R, Fulham MJ, Feng DD, Chen M. Dictionary Pruning with Visual Word Significance for Medical Image Retrieval. Neurocomputing. 2016 Feb 12; 177:75-88. PMID: 27688597.
    View in: PubMed
  6. Zhang F, Song Y, Cai W, Liu S, Liu S, Pujol S, Kikinis R, Xia Y, Fulham MJ, Feng DD. Pairwise Latent Semantic Association for Similarity Computation in Medical Imaging. IEEE Trans Biomed Eng. 2016 May; 63(5):1058-1069. PMID: 26372117.
    View in: PubMed
  7. Liu S, Cai W, Liu S, Zhang F, Fulham M, Feng D, Pujol S, Kikinis R. Multimodal neuroimaging computing: the workflows, methods, and platforms. Brain Inform. 2015 Sep; 2(3):181-195. PMID: 27747508.
    View in: PubMed
  8. Liu S, Cai W, Liu S, Zhang F, Fulham M, Feng D, Pujol S, Kikinis R. Multimodal neuroimaging computing: the workflows, methods, and platforms. Brain Inform. 2015; 2:181-195. PMID: 26870630.
    View in: PubMed
  9. Liu S, Cai W, Liu S, Zhang F, Fulham M, Feng D, Pujol S, Kikinis R. Multimodal neuroimaging computing: a review of the applications in neuropsychiatric disorders. Brain Inform. 2015 Sep; 2(3):167-180. PMID: 27747507.
    View in: PubMed
  10. Liu S, Cai W, Liu S, Zhang F, Fulham M, Feng D, Pujol S, Kikinis R. Multimodal neuroimaging computing: a review of the applications in neuropsychiatric disorders. Brain Inform. 2015; 2:167-180. PMID: 26870629.
    View in: PubMed
  11. Pujol S, Wells W, Pierpaoli C, Brun C, Gee J, Cheng G, Vemuri B, Commowick O, Prima S, Stamm A, Goubran M, Khan A, Peters T, Neher P, Maier-Hein KH, Shi Y, Tristan-Vega A, Veni G, Whitaker R, Styner M, Westin CF, Gouttard S, Norton I, Chauvin L, Mamata H, Gerig G, Nabavi A, Golby A, Kikinis R. The DTI Challenge: Toward Standardized Evaluation of Diffusion Tensor Imaging Tractography for Neurosurgery. J Neuroimaging. 2015 Nov-Dec; 25(6):875-82. PMID: 26259925; PMCID: PMC4641305 [Available on 11/01/16].
  12. Liu S, Liu S, Cai W, Che H, Pujol S, Kikinis R, Feng D, Fulham MJ. Multimodal neuroimaging feature learning for multiclass diagnosis of Alzheimer's disease. IEEE Trans Biomed Eng. 2015 Apr; 62(4):1132-40. PMID: 25423647; PMCID: PMC4394860.
  13. Liu S, Cai W, Wen L, Feng DD, Pujol S, Kikinis R, Fulham MJ, Eberl S. Multi-Channel neurodegenerative pattern analysis and its application in Alzheimer's disease characterization. Comput Med Imaging Graph. 2014 Sep; 38(6):436-44. PMID: 24933011; PMCID: PMC4135007.
  14. Oyama R, Jakab M, Kikuchi A, Sugiyama T, Kikinis R, Pujol S. Towards improved ultrasound-based analysis and 3D visualization of the fetal brain using the 3D Slicer. Ultrasound Obstet Gynecol. 2013 Nov; 42(5):609-10. PMID: 23576282; PMCID: PMC4032474.
  15. Farzinfar M, Oguz I, Smith RG, Verde AR, Dietrich C, Gupta A, Escolar ML, Piven J, Pujol S, Vachet C, Gouttard S, Gerig G, Dager S, McKinstry RC, Paterson S, Evans AC, Styner MA. Diffusion imaging quality control via entropy of principal direction distribution. Neuroimage. 2013 Nov 15; 82:1-12. PMID: 23684874; PMCID: PMC3798052.
  16. Liu S, Cai W, Song Y, Pujol S, Kikinis R, Wen L, Feng DD. Localized Sparse Code Gradient in Alzheimer's disease staging. Conf Proc IEEE Eng Med Biol Soc. 2013; 2013:5398-401. PMID: 24110956; PMCID: PMC4849882.
  17. Liu S, Song Y, Cai W, Pujol S, Kikinis R, Wang X, Feng D. Multifold Bayesian kernelization in Alzheimer's diagnosis. Med Image Comput Comput Assist Interv. 2013; 16(Pt 2):303-10. PMID: 24579154; PMCID: PMC4017205.
  18. Lemaire JJ, Golby A, Wells WM, Pujol S, Tie Y, Rigolo L, Yarmarkovich A, Pieper S, Westin CF, Jolesz F, Kikinis R. Extended Broca's area in the functional connectome of language in adults: combined cortical and subcortical single-subject analysis using fMRI and DTI tractography. Brain Topogr. 2013 Jul; 26(3):428-41. PMID: 23001727; PMCID: PMC3966184.
  19. Fedorov A, Beichel R, Kalpathy-Cramer J, Finet J, Fillion-Robin JC, Pujol S, Bauer C, Jennings D, Fennessy F, Sonka M, Buatti J, Aylward S, Miller JV, Pieper S, Kikinis R. 3D Slicer as an image computing platform for the Quantitative Imaging Network. Magn Reson Imaging. 2012 Nov; 30(9):1323-41. PMID: 22770690; PMCID: PMC3466397.
  20. Pujol S, Magnotta V, De Siebenthal J, Kubicki M, Hayes K, Westin CF, Lemaire JJ, Kikinis R, Gollub RL, Wells W. Towards Validation of DT-MRI Tractography: Statistical Analysis of the Differences Observed Among Tractography Algorithms. Diffusion Modeling Workshop - International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI 2009). 2009.
  21. Sonia Pujol. Computer-Assisted 3D Visualization with Slicer. 2009.
  22. Sonia Pujol. Slicer3Minute tutorial. 2009.
  23. Pujol S, Westin CF, Whitaker R, Gerig G, Fletcher T, Magnotta V, Bouix S, Kikinis R, Wells W, Gollub R. . Preliminary results on the use of STAPLE for evaluating DT-MRI tractography in the absence of ground truth. Proceedings of the 17th Scientific Meeting of the International Society for Magnetic Resonance in Medicine. 2009.
  24. Pujol S, Kikinis R, Gollub R. Diffusion Tensor Imaging workshops: a training initiative for exploring brain connectivity. Harvard Medical Education Day. 2008.
  25. Sonia Pujol. Expectation-Maximization Segmentation. 2008.
  26. Sonia Pujol and Kai Frerichs. Image-guided Neurointerventional Surgery. Minimally Invasive Technologies and Nanosystems for Diagnosis and Therapies. 2008; 59-67.
  27. Sonia Pujol. Programming in Slicer3. 2008.
  28. Sonia Pujol, Randy Gollub. 3D Data Loading and Visualization in Slicer3. 2008.
  29. Pujol S, Kikinis R, Gollub R. Lowering the barriers inherent in translating advances in neuroimage analysis to clinical research applications. Acad Radiol. 2008 Jan; 15(1):114-8. PMID: 18078914; PMCID: PMC2234595.
  30. Sonia Pujol, Randy Gollub. Image Registration. 2007.
  31. Pujol S, Frerichs K, Norbash A, Kikinis R, Westin CF. Preliminary results of nonfluoroscopy-based 3D navigation for neurointerventional procedures. J Vasc Interv Radiol. 2007 Feb; 18(2):289-98. PMID: 17327564.
    View in: PubMed
  32. Pujol S, Westin C-F, Kikinis K, Frerichs S. Neurointerventional 3D Roadmapping: A Phantom Study. Annual Meeting of the American Society of Interventional and Therapeutic Neuroradiology. 2007.
  33. Pujol S, Baldwin M, Nassiri J, Castellanos J, Shaffer K. Expanded use of 3D modeling from CT datasets for teaching difficult anatomical concepts. 55th Annual Meeting of Association of University Radiologists. 2007.
  34. Sonia Pujol, Randy Gollub. Diffusion Tensor Magnetic Resonance Imaging. 2006.
  35. Sonia Pujol, Randy Gollub. Functional Magnetic Resonance Imaging. 2006.
  36. Sonia Pujol, Randy Gollub. Diffusion Weighted Magnetic Resonance Imaging: Converting Dicom data into Nrrd file format. 2006.
  37. Sonia Pujol, Gordon Kindlmann, Randy Gollub. Diffusion Tensor Magnetic Resonance Imaging: Converting tensor data into Nrrd file format. 2006.
  38. Sonia Pujol, Randy Gollub. Automatic Segmentation of the Brain. 2006.
  39. Shaffer K, Pujol S, Baldwin M, Castellanos J, Huang A . Use of a research 3D modeling program for anatomic education. Annual Meeting of the Radiological Society of North America. 2006.
  40. Pujol S, Shaffer K. Using an open-source 3D modeling software to enhance teaching of radiologic anatomy. 54th Annual Meeting of the Association of University Radiologists. 2006.
  41. Pujol S, Frerichs K, Westin C-F. Computer-assisted Navigation for the Treatment of Brain Aneurysms. IEEE International Conference on Acoustics, Speech and Signal Processing. 2006.
  42. Sonia Pujol, Randy Gollub. FreeSurfer Reader. 2005.
  43. Sonia Pujol, Randy Gollub. 3D Data Saving. 2005.
  44. Sonia Pujol, Randy Gollub. 3D Data Loading and Visualization. 2005.
  45. Pujol S, Westin C-F, Frerichs K. Computer-Assisted Endovascular Navigation for the Treatment of Brain Aneurysms. 30th Annual Scientific Meeting of the Society of Interventional Radiology. 2005.
  46. Wada J, DiMaio S, Pujol S, Hata N. Kikinis R, Jolesz F. Development of a navigation system for neurofiberscopic surgery. International Brain Mapping and Intraoperative Surgical Planning Symposium. 2005.
  47. Pujol S, Frerichs K, Westin C-F, Norbash A. Real-time endovascular navigation. 43 rd Annual Meeting of the American Society of Neuroradiology. 2005.
  48. Pujol S, Shaffer K. Using an open-source 3D modeling software to enhance teaching of radiologic anatomy. 53rd Annual Meeting of the Association of University Radiologists. 2005.
  49. Bricault I, DiMaio S, Clatz O, Pujol S, Vosburgh K, Kikinis R. Computer-Assisted Interventions on liver: Feasibility of the anchor needle technique for real-time targeting of lesions with respiratory motion. Surgetica 2005 – Computer-Aided Medical Interventions : Tools and Applications. 2005; 348-352.
  50. Pujol S, Pecher M, Magne JL, Cinquin P. A virtual reality based navigation system for endovascular surgery. Stud Health Technol Inform. 2004; 98:310-2. PMID: 15544296.
    View in: PubMed
  51. Pujol S, Pecher M, Cinquin P. Magnetic guidance of rndovascular fevices for the treatment of abdominal aortic aneurysms. 2003; 134-137.
  52. Pujol S, Pecher M, Cinquin P. Computer-aided endovascular surgery: minimally invasive treatment of AAA using the Endovax system. European Symposium of Vascular Biomaterials. 2003.
  53. Pujol S, Pecher M, Cinquin P, Bricault I, Voirin D. Minimally invasive navigation for the endovascular treatment of abdominal aortic aneurysm: preclinical validation of the Endovax system. Proceedings of the 6th International Conference on Medical Image Computing and Computer Assisted Intervention. 2003; 2879:231-8.
  54. Pujol S, Pecher M, Cinquin P. Magnetic guidance of endovascular devices in pre-operative CT images for the treatment of abdominal aortic aneurysms. Surgetica 2002 Computer-Aided Medical Interventions: Tools and Applications. 2002; 173-6.
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