Harvard Catalyst Profiles

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Seth Raphael Goldman, Ph.D.

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Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
  1. Vvedenskaya IO, Goldman SR, Nickels BE. Analysis of Bacterial Transcription by "Massively Systematic Transcript End Readout," MASTER. Methods Enzymol. 2018; 612:269-302. PMID: 30502946.
    Citations:    Fields:    
  2. Vvedenskaya IO, Zhang Y, Goldman SR, Valenti A, Visone V, Taylor DM, Ebright RH, Nickels BE. Massively Systematic Transcript End Readout, "MASTER": Transcription Start Site Selection, Transcriptional Slippage, and Transcript Yields. Mol Cell. 2015 Dec 17; 60(6):953-65. PMID: 26626484.
    Citations: 16     Fields:    Translation:Cells
  3. Goldman SR, Nair NU, Wells CD, Nickels BE, Hochschild A. The primary s factor in Escherichia coli can access the transcription elongation complex from solution in vivo. Elife. 2015 Sep 15; 4. PMID: 26371553.
    Citations: 6     Fields:    Translation:Cells
  4. Druzhinin SY, Tran NT, Skalenko KS, Goldman SR, Knoblauch JG, Dove SL, Nickels BE. A Conserved Pattern of Primer-Dependent Transcription Initiation in Escherichia coli and Vibrio cholerae Revealed by 5' RNA-seq. PLoS Genet. 2015 Jul; 11(7):e1005348. PMID: 26131907.
    Citations: 4     Fields:    Translation:Cells
  5. Vvedenskaya IO, Goldman SR, Nickels BE. Preparation of cDNA libraries for high-throughput RNA sequencing analysis of RNA 5' ends. Methods Mol Biol. 2015; 1276:211-28. PMID: 25665566.
    Citations: 3     Fields:    Translation:Cells
  6. Vvedenskaya IO, Vahedian-Movahed H, Bird JG, Knoblauch JG, Goldman SR, Zhang Y, Ebright RH, Nickels BE. Interactions between RNA polymerase and the "core recognition element" counteract pausing. Science. 2014 Jun 13; 344(6189):1285-9. PMID: 24926020.
    Citations: 45     Fields:    Translation:Cells
  7. Vvedenskaya IO, Sharp JS, Goldman SR, Kanabar PN, Livny J, Dove SL, Nickels BE. Growth phase-dependent control of transcription start site selection and gene expression by nanoRNAs. Genes Dev. 2012 Jul 01; 26(13):1498-507. PMID: 22751503.
    Citations: 16     Fields:    
  8. Goldman SR, Sharp JS, Vvedenskaya IO, Livny J, Dove SL, Nickels BE. NanoRNAs prime transcription initiation in vivo. Mol Cell. 2011 Jun 24; 42(6):817-25. PMID: 21700226.
    Citations: 36     Fields:    Translation:Cells
  9. Goldman SR, Ebright RH, Nickels BE. Direct detection of abortive RNA transcripts in vivo. Science. 2009 May 15; 324(5929):927-8. PMID: 19443781.
    Citations: 51     Fields:    Translation:Cells
  10. Goldman SR, Tu Y, Goldberg MB. Differential regulation by magnesium of the two MsbB paralogs of Shigella flexneri. J Bacteriol. 2008 May; 190(10):3526-37. PMID: 18359815.
    Citations: 11     Fields:    Translation:Cells
  11. Wing HJ, Goldman SR, Ally S, Goldberg MB. Modulation of an outer membrane protease contributes to the virulence defect of Shigella flexneri strains carrying a mutation in the virK locus. Infect Immun. 2005 Feb; 73(2):1217-20. PMID: 15664968.
    Citations: 9     Fields:    Translation:Cells
  12. Wing HJ, Yan AW, Goldman SR, Goldberg MB. Regulation of IcsP, the outer membrane protease of the Shigella actin tail assembly protein IcsA, by virulence plasmid regulators VirF and VirB. J Bacteriol. 2004 Feb; 186(3):699-705. PMID: 14729695.
    Citations: 17     Fields:    Translation:Cells
  13. Saier MH, Goldman SR, Maile RR, Moreno MS, Weyler W, Yang N, Paulsen IT. Transport capabilities encoded within the Bacillus subtilis genome. J Mol Microbiol Biotechnol. 2002 Jan; 4(1):37-67. PMID: 11763970.
    Citations: 12     Fields:    Translation:Cells
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Funded by the NIH National Center for Advancing Translational Sciences through its Clinical and Translational Science Awards Program, grant number UL1TR002541.