Harvard Catalyst Profiles

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Amy Ly, M.D.

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Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
  1. Spring LM, Specht MC, Jimenez RB, Isakoff SJ, Wang GX, Ly A, Shin JA, Bardia A, Moy B. Case 22-2020: A 62-Year-Old Woman with Early Breast Cancer during the Covid-19 Pandemic. N Engl J Med. 2020 Jul 16; 383(3):262-272. PMID: 32610007.
    Citations:    
  2. Liu Z, Ahn MH, Kurokawa T, Ly A, Zhang G, Wang F, Yamada T, Sadagopan A, Cheng J, Ferrone CR, Liss AS, Honselmann KC, Wojtkiewicz GR, Ferrone S, Wang X. A fast, simple, and cost-effective method of expanding patient-derived xenograft mouse models of pancreatic ductal adenocarcinoma. J Transl Med. 2020 Jun 24; 18(1):255. PMID: 32580742.
    Citations:    
  3. Torous VF, Brackett D, Brown P, Edwin N, Heidarian A, Lobuono C, Sun T, Pitman MB, Ly A. Oil red O staining for lipid-laden macrophage index of bronchoalveolar lavage: interobserver agreement and challenges to interpretation. J Am Soc Cytopathol. 2020 Jun 10. PMID: 32674937.
    Citations:    
  4. Torous VF, Pitman MB, Ly A. Evaluation of the clinical utility of reflex GMS and AFB stains on BAL specimens from lung transplant patients. J Am Soc Cytopathol. 2020 May - Jun; 9(3):166-172. PMID: 32179025.
    Citations:    
  5. Costa C, Wang Y, Ly A, Hosono Y, Murchie E, Walmsley CS, Huynh T, Healy C, Peterson R, Yanase S, Jakubik CT, Henderson LE, Damon LJ, Timonina D, Sanidas I, Pinto CJ, Mino-Kenudson M, Stone JR, Dyson NJ, Ellisen LW, Bardia A, Ebi H, Benes CH, Engelman JA, Juric D. PTEN Loss Mediates Clinical Cross-Resistance to CDK4/6 and PI3Ka Inhibitors in Breast Cancer. Cancer Discov. 2020 01; 10(1):72-85. PMID: 31594766.
    Citations:    
  6. Hoda RS, Arpin Iii RN, Gottumukkala RV, Hughes KS, Ly A, Brachtel EF. Diagnostic Value of Fine-Needle Aspiration in Male Breast Lesions. Acta Cytol. 2019; 63(4):319-327. PMID: 30904908.
    Citations:    
  7. Haitz K, Ly A, Smith G. Idiopathic granulomatous mastitis. Cutis. 2019 Jan; 103(1):38-42. PMID: 30758334.
    Citations:    
  8. Zhang Y, Schroeder BE, Jerevall PL, Ly A, Nolan H, Schnabel CA, Sgroi DC. A Novel Breast Cancer Index for Prediction of Distant Recurrence in HR+ Early-Stage Breast Cancer with One to Three Positive Nodes. Clin Cancer Res. 2017 Dec 01; 23(23):7217-7224. PMID: 28939745.
    Citations: 1     Fields:    Translation:Humans
  9. Di Xia F, Ly A, Smith GP. Mycophenolate mofetil as a successful therapy for idiopathic granulomatous mastitis. Dermatol Online J. 2017 Jul 15; 23(7). PMID: 29469699.
    Citations:    Fields:    Translation:Humans
  10. Aisagbonhi O, DeLelys M, Hartford N, Preffer F, Ly A. Utility of Flow Cytometry in Diagnosing Hematologic Malignancy in Tonsillar Tissue. Int J Surg Pathol. 2017 Aug; 25(5):406-413. PMID: 28351195.
    Citations:    Fields:    Translation:Humans
  11. Merrill AL, Buckley J, Tang R, Brachtel E, Rai U, Michaelson J, Ly A, Specht MC, Yagi Y, Smith BL. A Study of the Growth Patterns of Breast Carcinoma Using 3D Reconstruction: A Pilot Study. Breast J. 2017 Jan; 23(1):83-89. PMID: 27860134.
    Citations: 2     Fields:    Translation:Humans
  12. Dong J, Ly A, Arpin R, Ahmed Q, Brachtel E. Breast fine needle aspiration continues to be relevant in a large academic medical center: experience from Massachusetts General Hospital. Breast Cancer Res Treat. 2016 07; 158(2):297-305. PMID: 27383478.
    Citations: 1     Fields:    Translation:Humans
  13. Ly A, Ono JC, Hughes KS, Pitman MB, Balassanian R. Fine-Needle Aspiration Biopsy of Palpable Breast Masses: Patterns of Clinical Use and Patient Experience. J Natl Compr Canc Netw. 2016 05; 14(5):527-36. PMID: 27160231.
    Citations: 2     Fields:    Translation:Humans
  14. Sarraj WM, Tang R, Najjar AL, Griffin M, Bui AH, Zambeli-Ljepovic A, Senter-Zapata M, Lewin-Berlin M, Fernandez L, Buckley J, Ly A, Brachtel E, Aftreth O, Gilbertson J, Yagi Y, Gadd M, Hughes KS, Smith BL, Michaelson JS. Prediction of primary breast cancer size and T-stage using micro-computed tomography in lumpectomy specimens. J Pathol Inform. 2015; 6:60. PMID: 26730350.
    Citations: 2     
  15. Solga AC, Pong WW, Kim KY, Cimino PJ, Toonen JA, Walker J, Wylie T, Magrini V, Griffith M, Griffith OL, Ly A, Ellisman MH, Mardis ER, Gutmann DH. RNA Sequencing of Tumor-Associated Microglia Reveals Ccl5 as a Stromal Chemokine Critical for Neurofibromatosis-1 Glioma Growth. Neoplasia. 2015 Oct; 17(10):776-88. PMID: 26585233.
    Citations: 18     Fields:    Translation:HumansAnimalsCells
  16. Wang Y, Li W, Patel SS, Cong J, Zhang N, Sabbatino F, Liu X, Qi Y, Huang P, Lee H, Taghian A, Li JJ, DeLeo AB, Ferrone S, Epperly MW, Ferrone CR, Ly A, Brachtel EF, Wang X. Blocking the formation of radiation-induced breast cancer stem cells. Oncotarget. 2014 Jun 15; 5(11):3743-55. PMID: 25003837.
    Citations: 15     Fields:    Translation:HumansAnimalsCells
  17. Lohr JG, Adalsteinsson VA, Cibulskis K, Choudhury AD, Rosenberg M, Cruz-Gordillo P, Francis JM, Zhang CZ, Shalek AK, Satija R, Trombetta JJ, Lu D, Tallapragada N, Tahirova N, Kim S, Blumenstiel B, Sougnez C, Lowe A, Wong B, Auclair D, Van Allen EM, Nakabayashi M, Lis RT, Lee GS, Li T, Chabot MS, Ly A, Taplin ME, Clancy TE, Loda M, Regev A, Meyerson M, Hahn WC, Kantoff PW, Golub TR, Getz G, Boehm JS, Love JC. Whole-exome sequencing of circulating tumor cells provides a window into metastatic prostate cancer. Nat Biotechnol. 2014 May; 32(5):479-84. PMID: 24752078.
    Citations: 146     Fields:    Translation:HumansCells
  18. Hunt DP, Muse VV, Ly A. Case records of the Massachusetts General Hospital. Case 4-2014. A 39-year-old man with night sweats and abdominal pain. N Engl J Med. 2014 Jan 30; 370(5):467-73. PMID: 24476436.
    Citations:    Fields:    Translation:Humans
  19. Ly A, Beck AH, Pai RK, Kong CS. Increased rate of atypical squamous cells of undetermined significance and declining high-risk human papillomavirus rates following implementation of ThinPrep Imaging System are associated with increased nuclear chromasia. J Am Soc Cytopathol. 2014 Mar - Apr; 3(2):73-78. PMID: 31051704.
    Citations:    
  20. Reisenbichler ES, Lester SC, Richardson AL, Dillon DA, Ly A, Brock JE. Interobserver concordance in implementing the 2010 ASCO/CAP recommendations for reporting ER in breast carcinomas: a demonstration of the difficulties of consistently reporting low levels of ER expression by manual quantification. Am J Clin Pathol. 2013 Oct; 140(4):487-94. PMID: 24045544.
    Citations: 9     Fields:    Translation:Humans
  21. Ly A. Talking to patients about a diagnosis of malignancy in a fine-needle aspiration clinic setting. Cancer Cytopathol. 2013 Jul; 121(7):339-40. PMID: 23853169.
    Citations:    Fields:    Translation:Humans
  22. Ly A, Lester SC, Dillon D. Prognostic Factors for Patients with Breast Cancer: Traditional and New. Surg Pathol Clin. 2012 Sep; 5(3):775-85. PMID: 26838288.
    Citations: 1     Fields:    
  23. Sahni VA, Ly A, Silverman SG. Usefulness of percutaneous biopsy in diagnosing benign renal masses that mimic malignancy. Abdom Imaging. 2011 Feb; 36(1):91-101. PMID: 20049430.
    Citations: 5     Fields:    Translation:Humans
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Funded by the NIH National Center for Advancing Translational Sciences through its Clinical and Translational Science Awards Program, grant number UL1TR002541.