Harvard Catalyst Profiles

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William Mercer Wells, Ph.D.

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Other Positions
Title
Institution
Department

Research
research activities and funding
The research activities and funding listed below are automatically derived from NIH ExPORTER and other sources, which might result in incorrect or missing items. Faculty can login to make corrections and additions.
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  1. R13EB017085 (WELLS, WILLIAM M.) Apr 1, 2013 - Mar 31, 2014
    NIH
    Information Processing in Medical Imaging (IPMI 2013)
    Role: Principal Investigator
  2. R01HD057963 (WELLS, WILLIAM M.) Sep 30, 2009 - Aug 31, 2012
    NIH
    Templates and Tools for Pediatric Neuroanatomical Analysis
    Role: Principal Investigator
  3. R01CA138419 (WELLS, WILLIAM M.) Sep 29, 2009 - Mar 31, 2016
    NIH
    Image Registration for Ultrasound-Based Neurosurgical Navigation
    Role: Co-Principal Investigator
  4. R21EB000347 (WELLS, WILLIAM M) Sep 1, 2001 - Aug 30, 2004
    NIH
    MUTUAL INFORMATION BASED IMAGE PROCESSING FOR FMRI
    Role: Principal Investigator
  5. R21CA089449 (WELLS, WILLIAM M) Sep 1, 2001 - Aug 30, 2003
    NIH
    MUTUAL INFORMATION BASED IMAGE PROCESSING FOR FMRI
    Role: Principal Investigator

Bibliographic
selected publications
Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
  1. Young SI, Balbastre Y, Dalca AV, Wells WM, Iglesias JE, Fischl B. SuperWarp: Supervised Learning and Warping on U-Net for Invariant Subvoxel-Precise Registration. Biomed Image Regist (2022). 2022 Jul; 13386:103-115. PMID: 36383500; PMCID: PMC9645132.
    Citations:    
  2. Zhang F, Wells WM, O'Donnell LJ. Deep Diffusion MRI Registration (DDMReg): A Deep Learning Method for Diffusion MRI Registration. IEEE Trans Med Imaging. 2022 06; 41(6):1454-1467. PMID: 34968177; PMCID: PMC9273049.
    Citations: 1     Fields:    Translation:Humans
  3. Abdelmoula WM, Stopka SA, Randall EC, Regan M, Agar JN, Sarkaria JN, Wells WM, Kapur T, Agar NYR. massNet: integrated processing and classification of spatially resolved mass spectrometry data using deep learning for rapid tumor delineation. Bioinformatics. 2022 03 28; 38(7):2015-2021. PMID: 35040929; PMCID: PMC8963284.
    Citations: 1     Fields:    
  4. Liao R, Moyer D, Cha M, Quigley K, Berkowitz S, Horng S, Golland P, Wells WM. Multimodal Representation Learning via Maximization of Local Mutual Information. Med Image Comput Comput Assist Interv. 2021 Sep-Oct; 12902:273-283. PMID: 36282980; PMCID: PMC9576150.
    Citations:    Fields:    
  5. Abdelmoula WM, Lopez BG, Randall EC, Kapur T, Sarkaria JN, White FM, Agar JN, Wells WM, Agar NYR. Peak learning of mass spectrometry imaging data using artificial neural networks. Nat Commun. 2021 09 20; 12(1):5544. PMID: 34545087.
    Citations: 2     Fields:    Translation:HumansAnimals
  6. Mehrtash A, Kapur T, Tempany CM, Abolmaesumi P, Wells WM. PROSTATE CANCER DIAGNOSIS WITH SPARSE BIOPSY DATA AND IN PRESENCE OF LOCATION UNCERTAINTY. Proc IEEE Int Symp Biomed Imaging. 2021 Apr; 2021:443-447. PMID: 36225596; PMCID: PMC9552971.
    Citations:    
  7. Sedghi A, O'Donnell LJ, Kapur T, Learned-Miller E, Mousavi P, Wells WM. Image registration: Maximum likelihood, minimum entropy and deep learning. Med Image Anal. 2021 04; 69:101939. PMID: 33388458; PMCID: PMC8046343.
    Citations: 3     Fields:    Translation:Humans
  8. Mehrtash A, Abolmaesumi P, Golland P, Kapur T, Wassermann D, Wells WM. PEP: Parameter Ensembling by Perturbation. Adv Neural Inf Process Syst. 2020 Dec; 33:8895-8906. PMID: 36415583; PMCID: PMC9678345.
    Citations:    
  9. Mehrtash A, Wells WM, Tempany CM, Abolmaesumi P, Kapur T. Confidence Calibration and Predictive Uncertainty Estimation for Deep Medical Image Segmentation. IEEE Trans Med Imaging. 2020 12; 39(12):3868-3878. PMID: 32746129.
    Citations: 10     Fields:    Translation:Humans
  10. Haouchine N, Juvekar P, Wells WM, Cotin S, Golby A, Frisken S. Deformation Aware Augmented Reality for Craniotomy using 3D/2D Non-rigid Registration of Cortical Vessels. Med Image Comput Comput Assist Interv. 2020 Oct; 12264:735-744. PMID: 33778818.
    Citations: 1     Fields:    
  11. Sedghi A, Mehrtash A, Jamzad A, Amalou A, Wells WM, Kapur T, Kwak JT, Turkbey B, Choyke P, Pinto P, Wood B, Xu S, Abolmaesumi P, Mousavi P. Improving detection of prostate cancer foci via information fusion of MRI and temporal enhanced ultrasound. Int J Comput Assist Radiol Surg. 2020 Jul; 15(7):1215-1223. PMID: 32372384; PMCID: PMC8975142.
    Citations: 3     Fields:    Translation:Humans
  12. Kikinis R, Wells WM. Detection of Brain Metastases with Deep Learning Single-Shot Detector Algorithms. Radiology. 2020 05; 295(2):416-417. PMID: 32186458; PMCID: PMC7549124.
    Citations: 3     Fields:    Translation:Humans
  13. Haouchine N, Juvekar P, Golby A, Wells WM, Cotin S, Frisken S. Alignment of Cortical Vessels viewed through the Surgical Microscope with Preoperative Imaging to Compensate for Brain Shift. Proc SPIE Int Soc Opt Eng. 2020 Feb; 11315. PMID: 33840881.
    Citations:    
  14. Frisken S, Luo M, Juvekar P, Bunevicius A, Machado I, Unadkat P, Bertotti MM, Toews M, Wells WM, Miga MI, Golby AJ. A comparison of thin-plate spline deformation and finite element modeling to compensate for brain shift during tumor resection. Int J Comput Assist Radiol Surg. 2020 Jan; 15(1):75-85. PMID: 31444624.
    Citations: 6     Fields:    Translation:Humans
  15. Wang J, Wells WM, Golland P, Zhang M. Registration uncertainty quantification via low-dimensional characterization of geometric deformations. Magn Reson Imaging. 2019 12; 64:122-131. PMID: 31181245.
    Citations: 2     Fields:    Translation:Humans
  16. Fan G, Liu H, Wu Z, Li Y, Feng C, Wang D, Luo J, Wells WM, He S. Deep Learning-Based Automatic Segmentation of Lumbosacral Nerves on CT for Spinal Intervention: A Translational Study. AJNR Am J Neuroradiol. 2019 06; 40(6):1074-1081. PMID: 31147353; PMCID: PMC6746413.
    Citations: 6     Fields:    Translation:Humans
  17. Frisken S, Luo M, Machado I, Unadkat P, Juvekar P, Bunevicius A, Toews M, Wells WM, Miga MI, Golby AJ. Preliminary Results Comparing Thin Plate Splines with Finite Element Methods for Modeling Brain Deformation during Neurosurgery using Intraoperative Ultrasound. Proc SPIE Int Soc Opt Eng. 2019 Feb; 10951. PMID: 31000909; PMCID: PMC6467062.
    Citations: 3     
  18. Kocev B, Hahn HK, Linsen L, Wells WM, Kikinis R. Uncertainty-aware asynchronous scattered motion interpolation using Gaussian process regression. Comput Med Imaging Graph. 2019 03; 72:1-12. PMID: 30654093.
    Citations:    Fields:    Translation:Humans
  19. Mehrtash A, Ghafoorian M, Pernelle G, Ziaei A, Heslinga FG, Tuncali K, Fedorov A, Kikinis R, Tempany CM, Wells WM, Abolmaesumi P, Kapur T. Automatic Needle Segmentation and Localization in MRI With 3-D Convolutional Neural Networks: Application to MRI-Targeted Prostate Biopsy. IEEE Trans Med Imaging. 2019 04; 38(4):1026-1036. PMID: 30334789; PMCID: PMC6450731.
    Citations: 12     Fields:    Translation:Humans
  20. Wang J, Wells WM, Golland P, Zhang M. Efficient Laplace Approximation for Bayesian Registration Uncertainty Quantification. Med Image Comput Comput Assist Interv. 2018 Sep; 11070:880-888. PMID: 31134217; PMCID: PMC6533616.
    Citations: 2     Fields:    Translation:Humans
  21. Luo J, Frisken S, Machado I, Zhang M, Pieper S, Golland P, Toews M, Unadkat P, Sedghi A, Zhou H, Mehrtash A, Preiswerk F, Cheng CC, Golby A, Sugiyama M, Wells WM. Using the variogram for vector outlier screening: application to feature-based image registration. Int J Comput Assist Radiol Surg. 2018 Dec; 13(12):1871-1880. PMID: 30097956.
    Citations: 4     Fields:    Translation:Humans
  22. Custo A, Van De Ville D, Wells WM, Tomescu MI, Brunet D, Michel CM. Electroencephalographic Resting-State Networks: Source Localization of Microstates. Brain Connect. 2017 12; 7(10):671-682. PMID: 28938855.
    Citations: 64     Fields:    Translation:Humans
  23. Toews M, Wells WM. Phantomless Auto-Calibration and Online Calibration Assessment for a Tracked Freehand 2-D Ultrasound Probe. IEEE Trans Med Imaging. 2018 01; 37(1):262-272. PMID: 28910761.
    Citations: 5     Fields:    Translation:Humans
  24. Niethammer M, Pohl KM, Janoos F, Wells WM. ACTIVE MEAN FIELDS FOR PROBABILISTIC IMAGE SEGMENTATION: CONNECTIONS WITH CHAN-VESE AND RUDIN-OSHER-FATEMI MODELS. SIAM J Imaging Sci. 2017; 10(3):1069-1103. PMID: 29051796; PMCID: PMC5642306.
    Citations: 1     
  25. Zhang M, Wells WM, Golland P. Probabilistic modeling of anatomical variability using a low dimensional parameterization of diffeomorphisms. Med Image Anal. 2017 Oct; 41:55-62. PMID: 28732595.
    Citations: 2     Fields:    Translation:Humans
  26. Schabdach J, Wells WM, Cho M, Batmanghelich KN. A Likelihood-Free Approach for Characterizing Heterogeneous Diseases in Large-Scale Studies. Inf Process Med Imaging. 2017 Jun; 10265:170-183. PMID: 29129964.
    Citations: 6     Fields:    Translation:Humans
  27. Mehrtash A, Pesteie M, Hetherington J, Behringer PA, Kapur T, Wells WM, Rohling R, Fedorov A, Abolmaesumi P. DeepInfer: Open-Source Deep Learning Deployment Toolkit for Image-Guided Therapy. Proc SPIE Int Soc Opt Eng. 2017 Feb 11; 10135. PMID: 28615794; PMCID: PMC5467894.
    Citations: 14     
  28. Mehrtash A, Sedghi A, Ghafoorian M, Taghipour M, Tempany CM, Wells WM, Kapur T, Mousavi P, Abolmaesumi P, Fedorov A. Classification of Clinical Significance of MRI Prostate Findings Using 3D Convolutional Neural Networks. Proc SPIE Int Soc Opt Eng. 2017 Feb 11; 10134. PMID: 28615793; PMCID: PMC5467889.
    Citations: 25     
  29. Balasubramanian M, Wells WM, Ives JR, Britz P, Mulkern RV, Orbach DB. RF Heating of Gold Cup and Conductive Plastic Electrodes during Simultaneous EEG and MRI. Neurodiagn J. 2017; 57(1):69-83. PMID: 28436813.
    Citations: 2     Fields:    Translation:Humans
  30. O'Donnell LJ, Suter Y, Rigolo L, Kahali P, Zhang F, Norton I, Albi A, Olubiyi O, Meola A, Essayed WI, Unadkat P, Ciris PA, Wells WM, Rathi Y, Westin CF, Golby AJ. Automated white matter fiber tract identification in patients with brain tumors. Neuroimage Clin. 2017; 13:138-153. PMID: 27981029.
    Citations: 44     Fields:    Translation:Humans
  31. Zhang M, Wells WM, Golland P. Low-Dimensional Statistics of Anatomical Variability via Compact Representation of Image Deformations. Med Image Comput Comput Assist Interv. 2016 Oct; 9902:166-173. PMID: 28664199.
    Citations: 1     Fields:    Translation:Humans
  32. Kapur T, Pieper S, Fedorov A, Fillion-Robin JC, Halle M, O'Donnell L, Lasso A, Ungi T, Pinter C, Finet J, Pujol S, Jagadeesan J, Tokuda J, Norton I, Estepar RSJ, Gering D, Aerts HJWL, Jakab M, Hata N, Ibanez L, Blezek D, Miller J, Aylward S, Grimson WEL, Fichtinger G, Wells WM, Lorensen WE, Schroeder W, Kikinis R. Increasing the impact of medical image computing using community-based open-access hackathons: The NA-MIC and 3D Slicer experience. Med Image Anal. 2016 10; 33:176-180. PMID: 27498015.
    Citations: 15     Fields:    Translation:Humans
  33. Wells WM. Medical Image Analysis - past, present, and future. Med Image Anal. 2016 10; 33:4-6. PMID: 27342396.
    Citations:    Fields:    Translation:Humans
  34. Parisot S, Arslan S, Passerat-Palmbach J, Wells WM, Rueckert D. Group-wise parcellation of the cortex through multi-scale spectral clustering. Neuroimage. 2016 Aug 01; 136:68-83. PMID: 27192437.
    Citations: 18     Fields:    Translation:Humans
  35. Bersvendsen J, Toews M, Danudibroto A, Wells WM, Urheim S, Estépar RS, Samset E. Robust Spatio-Temporal Registration of 4D Cardiac Ultrasound Sequences. Proc SPIE Int Soc Opt Eng. 2016 Feb 27; 9790. PMID: 27516706; PMCID: PMC4976768.
    Citations: 4     
  36. Preiswerk F, Toews M, Hoge WS, Chiou JG, Panych LP, Wells WM, Madore B. Hybrid Utrasound and MRI Acquisitions for High-Speed Imaging of Respiratory Organ Motion. Med Image Comput Comput Assist Interv. 2015 Oct; 9349:315-322. PMID: 27135063.
    Citations: 2     Fields:    
  37. Toews M, Wachinger C, Estepar RS, Wells WM. A Feature-Based Approach to Big Data Analysis of Medical Images. Inf Process Med Imaging. 2015; 24:339-50. PMID: 26221685.
    Citations: 3     Fields:    Translation:Humans
  38. Parisot S, Arslan S, Passerat-Palmbach J, Wells WM, Rueckert D. Tractography-Driven Groupwise Multi-scale Parcellation of the Cortex. Inf Process Med Imaging. 2015; 24:600-12. PMID: 26221706; PMCID: PMC4667730.
    Citations: 9     Fields:    Translation:HumansCells
  39. Balasubramanian M, Mulkern RV, Wells WM, Sundaram P, Orbach DB. Magnetic resonance imaging of ionic currents in solution: the effect of magnetohydrodynamic flow. Magn Reson Med. 2015 Oct; 74(4):1145-55. PMID: 25273917.
    Citations: 2     Fields:    Translation:Humans
  40. Penzkofer T, Tuncali K, Fedorov A, Song SE, Tokuda J, Fennessy FM, Vangel MG, Kibel AS, Mulkern RV, Wells WM, Hata N, Tempany CM. Transperineal in-bore 3-T MR imaging-guided prostate biopsy: a prospective clinical observational study. Radiology. 2015 Jan; 274(1):170-80. PMID: 25222067; PMCID: PMC4334270.
    Citations: 35     Fields:    Translation:Humans
  41. Wassermann D, Ross J, Washko G, Wells WM, San Jose-Estepar R. Deformable Registration of Feature-Endowed Point Sets Based on Tensor Fields. Proc IEEE Comput Soc Conf Comput Vis Pattern Recognit. 2014 Jun; 2014:2729-2735. PMID: 25473253; PMCID: PMC4248604.
    Citations: 1     
  42. Fedorov A, Wells WM, Kikinis R, Tempany CM, Vangel MG. Application of tolerance limits to the characterization of image registration performance. IEEE Trans Med Imaging. 2014 Jul; 33(7):1541-50. PMID: 24759985.
    Citations:    Fields:    Translation:Humans
  43. Fedorov A, Song SE, Kapur T, Owen R, Sugar EN, Nguyen P, Wells WM, Tempany CM. Prototype Design and Phantom Evaluation of a Device for Co-registered MRI/TRUS Imaging of the Prostate. Clin Image Based Proced. 2014; 8361:125-133. PMID: 25364786.
    Citations:    
  44. Liu X, Tuncali K, Wells WM, Zientara GP. Automatic iceball segmentation with adapted shape priors for MRI-guided cryoablation. J Magn Reson Imaging. 2015 Feb; 41(2):517-24. PMID: 24338961.
    Citations: 3     Fields:    Translation:Humans
  45. Risholm P, Janoos F, Norton I, Golby AJ, Wells WM. Bayesian characterization of uncertainty in intra-subject non-rigid registration. Med Image Anal. 2013 Jul; 17(5):538-55. PMID: 23602919.
    Citations: 8     Fields:    Translation:Humans
  46. Pernelle G, Mehrtash A, Barber L, Damato A, Wang W, Seethamraju RT, Schmidt E, Cormack RA, Wells W, Viswanathan A, Kapur T. Validation of catheter segmentation for MR-guided gynecologic cancer brachytherapy. Med Image Comput Comput Assist Interv. 2013; 16(Pt 3):380-7. PMID: 24505784.
    Citations: 7     Fields:    Translation:Humans
  47. Tunç B, Smith AR, Wasserman D, Pennec X, Wells WM, Verma R, Pohl KM. Multinomial probabilistic fiber representation for connectivity driven clustering. Inf Process Med Imaging. 2013; 23:730-41. PMID: 24684013.
    Citations: 4     Fields:    Translation:HumansCells
  48. Toews M, Zöllei L, Wells WM. Feature-based alignment of volumetric multi-modal images. Inf Process Med Imaging. 2013; 23:25-36. PMID: 24683955.
    Citations: 9     Fields:    Translation:Humans
  49. Wells WM, Joshi S, Pohl KM. Preface. Information processing in medical imaging. Inf Process Med Imaging. 2013; 23:V-VII. PMID: 24683952.
    Citations:    Fields:    
  50. Janoos F, Brown G, Mórocz IA, Wells WM. State-space analysis of working memory in schizophrenia: an fBIRN study. Psychometrika. 2013 Apr; 78(2):279-307. PMID: 25107617.
    Citations: 3     Fields:    Translation:Humans
  51. Toews M, Wells WM. Efficient and robust model-to-image alignment using 3D scale-invariant features. Med Image Anal. 2013 Apr; 17(3):271-82. PMID: 23265799.
    Citations: 21     Fields:    Translation:Humans
  52. Zhou B, Konstorum A, Duong T, Tieu KH, Wells WM, Brown GG, Stern HS, Shahbaba B. A hierarchical modeling approach to data analysis and study design in a multi-site experimental fMRI study. Psychometrika. 2013 Apr; 78(2):260-78. PMID: 25107616.
    Citations: 3     Fields:    Translation:Humans
  53. Pursley J, Risholm P, Fedorov A, Tuncali K, Fennessy FM, Wells WM, Tempany CM, Cormack RA. A Bayesian nonrigid registration method to enhance intraoperative target definition in image-guided prostate procedures through uncertainty characterization. Med Phys. 2012 Nov; 39(11):6858-67. PMID: 23127078.
    Citations: 4     Fields:    Translation:Humans
  54. Lemaire JJ, Golby A, Wells WM, Pujol S, Tie Y, Rigolo L, Yarmarkovich A, Pieper S, Westin CF, Jolesz F, Kikinis R. Extended Broca's area in the functional connectome of language in adults: combined cortical and subcortical single-subject analysis using fMRI and DTI tractography. Brain Topogr. 2013 Jul; 26(3):428-41. PMID: 23001727.
    Citations: 18     Fields:    Translation:HumansCells
  55. Fedorov A, Tuncali K, Fennessy FM, Tokuda J, Hata N, Wells WM, Kikinis R, Tempany CM. Image registration for targeted MRI-guided transperineal prostate biopsy. J Magn Reson Imaging. 2012 Oct; 36(4):987-92. PMID: 22645031.
    Citations: 30     Fields:    Translation:Humans
  56. Risholm P, Janoos F, Pursley J, Fedorov A, Tempany C, Cormack RA, Wells WM. Selection of optimal hyper-parameters for estimation of uncertainty in MRI-TRUS registration of the prostate. Med Image Comput Comput Assist Interv. 2012; 15(Pt 3):107-14. PMID: 23286120.
    Citations: 2     Fields:    Translation:Humans
  57. Moradi M, Janoos F, Fedorov A, Risholm P, Kapur T, Wolfsberger LD, Nguyen PL, Tempany CM, Wells WM. Two solutions for registration of ultrasound to MRI for image-guided prostate interventions. Annu Int Conf IEEE Eng Med Biol Soc. 2012; 2012:1129-32. PMID: 23366095.
    Citations: 9     Fields:    Translation:HumansCTClinical Trials
  58. Liu X, Tuncali K, Wells WM, Morrison PR, Zientara GP. Fully automatic 3D segmentation of iceball for image-guided cryoablation. Annu Int Conf IEEE Eng Med Biol Soc. 2012; 2012:2327-30. PMID: 23366390.
    Citations: 5     Fields:    Translation:Humans
  59. O'Donnell LJ, Wells WM, Golby AJ, Westin CF. Unbiased groupwise registration of white matter tractography. Med Image Comput Comput Assist Interv. 2012; 15(Pt 3):123-30. PMID: 23286122.
    Citations: 22     Fields:    Translation:HumansCells
  60. Toews M, Wells WM, Zöllei L. A feature-based developmental model of the infant brain in structural MRI. Med Image Comput Comput Assist Interv. 2012; 15(Pt 2):204-11. PMID: 23286050.
    Citations: 11     Fields:    Translation:Humans
  61. O'Donnell LJ, Rigolo L, Norton I, Wells WM, Westin CF, Golby AJ. fMRI-DTI modeling via landmark distance atlases for prediction and detection of fiber tracts. Neuroimage. 2012 Mar; 60(1):456-70. PMID: 22155376.
    Citations: 11     Fields:    Translation:Humans
  62. Fedorov A, Li X, Pohl KM, Bouix S, Styner M, Addicott M, Wyatt C, Daunais JB, Wells WM, Kikinis R. Atlas-guided segmentation of vervet monkey brain MRI. Open Neuroimag J. 2011; 5:186-97. PMID: 22253661.
    Citations: 11     
  63. Risholm P, Fedorov A, Pursley J, Tuncali K, Cormack R, Wells WM. PROBABILISTIC NON-RIGID REGISTRATION OF PROSTATE IMAGES: MODELING AND QUANTIFYING UNCERTAINTY. Proc IEEE Int Symp Biomed Imaging. 2011 Jun 09; 2011:553-556. PMID: 22288004.
    Citations: 5     
  64. Sundaram P, Mulkern RV, Wells WM, Triantafyllou C, Loddenkemper T, Bubrick EJ, Orbach DB. An empirical investigation of motion effects in eMRI of interictal epileptiform spikes. Magn Reson Imaging. 2011 Dec; 29(10):1401-9. PMID: 21550748.
    Citations:    Fields:    Translation:Humans
  65. Risholm P, Golby AJ, Wells W. Multimodal image registration for preoperative planning and image-guided neurosurgical procedures. Neurosurg Clin N Am. 2011 Apr; 22(2):197-206, viii. PMID: 21435571.
    Citations: 12     Fields:    Translation:Humans
  66. Pohl KM, Konukoglu E, Novellas S, Ayache N, Fedorov A, Talos IF, Golby A, Wells WM, Kikinis R, Black PM. A new metric for detecting change in slowly evolving brain tumors: validation in meningioma patients. Neurosurgery. 2011 Mar; 68(1 Suppl Operative):225-33. PMID: 21206318.
    Citations: 5     Fields:    Translation:Humans
  67. Janoos F, Singh S, Machiraju R, Wells WM, Mórocz IA. State-space models of mental processes from fMRI. Inf Process Med Imaging. 2011; 22:588-99. PMID: 21761688.
    Citations: 3     Fields:    Translation:Humans
  68. Risholm P, Ross J, Washko GR, Wells WM. Probabilistic elastography: estimating lung elasticity. Inf Process Med Imaging. 2011; 22:699-710. PMID: 21761697.
    Citations: 3     Fields:    Translation:Humans
  69. Risholm P, Balter J, Wells WM. Estimation of delivered dose in radiotherapy: the influence of registration uncertainty. Med Image Comput Comput Assist Interv. 2011; 14(Pt 1):548-55. PMID: 22003661.
    Citations: 5     Fields:    Translation:Humans
  70. Sundaram P, Wells WM, Mulkern RV, Bubrick EJ, Bromfield EB, Münch M, Orbach DB. Fast human brain magnetic resonance responses associated with epileptiform spikes. Magn Reson Med. 2010 Dec; 64(6):1728-38. PMID: 20806355.
    Citations: 7     Fields:    Translation:Humans
  71. Berlow YA, Wells WM, Ellison JM, Sung YH, Renshaw PF, Harper DG. Neuropsychiatric correlates of white matter hyperintensities in Alzheimer's disease. Int J Geriatr Psychiatry. 2010 Aug; 25(8):780-8. PMID: 19946864.
    Citations: 23     Fields:    Translation:Humans
  72. Riklin-Raviv T, Van Leemput K, Menze BH, Wells WM, Golland P. Segmentation of image ensembles via latent atlases. Med Image Anal. 2010 Oct; 14(5):654-65. PMID: 20580305.
    Citations: 18     Fields:    Translation:Humans
  73. Ou W, Wells WM, Golland P. Combining spatial priors and anatomical information for fMRI detection. Med Image Anal. 2010 Jun; 14(3):318-31. PMID: 20362488.
    Citations: 3     Fields:    Translation:Humans
  74. Lee JW, Wen PY, Hurwitz S, Black P, Kesari S, Drappatz J, Golby AJ, Wells WM, Warfield SK, Kikinis R, Bromfield EB. Morphological characteristics of brain tumors causing seizures. Arch Neurol. 2010 Mar; 67(3):336-42. PMID: 20212231; PMCID: PMC2995444.
    Citations: 51     Fields:    Translation:Humans
  75. Risholm P, Pieper S, Samset E, Wells WM. Summarizing and visualizing uncertainty in non-rigid registration. Med Image Comput Comput Assist Interv. 2010; 13(Pt 2):554-61. PMID: 20879359.
    Citations: 17     Fields:    Translation:Humans
  76. Toews M, Wells W, Collins DL, Arbel T. Feature-based morphometry: discovering group-related anatomical patterns. Neuroimage. 2010 Feb 01; 49(3):2318-27. PMID: 19853047.
    Citations: 25     Fields:    Translation:Humans
  77. Custo A, Boas DA, Tsuzuki D, Dan I, Mesquita R, Fischl B, Grimson WE, Wells W. Anatomical atlas-guided diffuse optical tomography of brain activation. Neuroimage. 2010 Jan 01; 49(1):561-7. PMID: 19643185.
    Citations: 47     Fields:    Translation:Humans
  78. Toews M, Wells WM. Bayesian registration via local image regions: information, selection and marginalization. Inf Process Med Imaging. 2009; 21:435-46. PMID: 19694283.
    Citations: 2     Fields:    Translation:Humans
  79. Poynton C, Jenkinson M, Wells W. Atlas-based improved prediction of magnetic field inhomogeneity for distortion correction of EPI data. Med Image Comput Comput Assist Interv. 2009; 12(Pt 2):951-9. PMID: 20426203.
    Citations: 4     Fields:    Translation:Humans
  80. Raviv TR, Van Leemput K, Wells WM, Golland P. Joint segmentation of image ensembles via latent atlases. Med Image Comput Comput Assist Interv. 2009; 12(Pt 1):272-80. PMID: 20425997.
    Citations: 2     Fields:    Translation:Humans
  81. Toews M, Wells WM, Collins DL, Arbel T. Feature-based morphometry. Med Image Comput Comput Assist Interv. 2009; 12(Pt 2):109-16. PMID: 20426102.
    Citations:    Fields:    Translation:Humans
  82. Maddah M, Zöllei L, Grimson WE, Wells WM. Modeling of Anatomical Information in Clustering of White Matter Fiber Trajectories Using Dirichlet Distribution. Proc Workshop Math Methods Biomed Image Analysis. 2008 Jul 15; 2008:1-7. PMID: 21625356.
    Citations: 9     
  83. Warfield SK, Zou KH, Wells WM. Validation of image segmentation by estimating rater bias and variance. Philos Trans A Math Phys Eng Sci. 2008 Jul 13; 366(1874):2361-75. PMID: 18407896.
    Citations: 19     Fields:    Translation:Humans
  84. Konukoglu E, Wells WM, Novellas S, Ayache N, Kikinis R, Black PM, Pohl KM. MONITORING SLOWLY EVOLVING TUMORS. Proc IEEE Int Symp Biomed Imaging. 2008 May; 2008:812-815. PMID: 28593030; PMCID: PMC5459366.
    Citations: 4     
  85. Maddah M, Zöllei L, Grimson WE, Westin CF, Wells WM. A Mathematical Framework for Incorporating Anatomical Knowledge in DT-MRI Analysis. Proc IEEE Int Symp Biomed Imaging. 2008; 4543943:105-108. PMID: 19212449.
    Citations: 9     
  86. Poynton C, Jenkinson M, Whalen S, Golby AJ, Wells W. Fieldmap-free retrospective registration and distortion correction for EPI-based functional imaging. Med Image Comput Comput Assist Interv. 2008; 11(Pt 2):271-9. PMID: 18982615.
    Citations: 1     Fields:    Translation:Humans
  87. Maddah M, Kubicki M, Wells WM, Westin CF, Shenton ME, Grimson WE. Findings in schizophrenia by tract-oriented DT-MRI analysis. Med Image Comput Comput Assist Interv. 2008; 11(Pt 1):917-24. PMID: 18979833.
    Citations: 10     Fields:    Translation:HumansCells
  88. Maddah M, Grimson WE, Warfield SK, Wells WM. A unified framework for clustering and quantitative analysis of white matter fiber tracts. Med Image Anal. 2008 Apr; 12(2):191-202. PMID: 18180197.
    Citations: 54     Fields:    Translation:HumansCells
  89. Pohl KM, Bouix S, Nakamura M, Rohlfing T, McCarley RW, Kikinis R, Grimson WE, Shenton ME, Wells WM. A hierarchical algorithm for MR brain image parcellation. IEEE Trans Med Imaging. 2007 Sep; 26(9):1201-12. PMID: 17896593; PMCID: PMC2768067.
    Citations: 42     Fields:    Translation:Humans
  90. Pohl KM, Fisher J, Bouix S, Shenton M, McCarley RW, Grimson WE, Kikinis R, Wells WM. Using the logarithm of odds to define a vector space on probabilistic atlases. Med Image Anal. 2007 Oct; 11(5):465-77. PMID: 17698403; PMCID: PMC2423493.
    Citations: 27     Fields:    Translation:Humans
  91. Mewes AU, Zöllei L, Hüppi PS, Als H, McAnulty GB, Inder TE, Wells WM, Warfield SK. Displacement of brain regions in preterm infants with non-synostotic dolichocephaly investigated by MRI. Neuroimage. 2007 Jul 15; 36(4):1074-85. PMID: 17513129.
    Citations: 10     Fields:    Translation:Humans
  92. Balci SK, Golland P, Shenton M, Wells WM. Free-Form B-spline Deformation Model for Groupwise Registration. Med Image Comput Comput Assist Interv. 2007; 10(WS):23-30. PMID: 20224762.
    Citations:    
  93. Maddah M, Wells WM, Warfield SK, Westin CF, Grimson WE. Probabilistic clustering and quantitative analysis of white matter fiber tracts. Inf Process Med Imaging. 2007; 20:372-83. PMID: 17633714.
    Citations: 12     Fields:    Translation:HumansCells
  94. Zöllei L, Jenkinson M, Timoner S, Wells W. A marginalized MAP approach and EM optimization for pair-wise registration. Inf Process Med Imaging. 2007; 20:662-74. PMID: 17633738.
    Citations: 7     Fields:    Translation:Humans
  95. Pohl KM, Kikinis R, Wells WM. Active mean fields: solving the mean field approximation in the level set framework. Inf Process Med Imaging. 2007; 20:26-37. PMID: 17633686.
    Citations: 9     Fields:    Translation:Humans
  96. Fan AC, Fisher JW, Wells WM, Levitt JJ, Willsky AS. MCMC curve sampling for image segmentation. Med Image Comput Comput Assist Interv. 2007; 10(Pt 2):477-85. PMID: 18044603.
    Citations: 3     Fields:    Translation:Humans
  97. Ellsmere J, Wells W. A system for accessing implantable medical ports in the office setting. Annu Int Conf IEEE Eng Med Biol Soc. 2007; 2007:3946-9. PMID: 18002863.
    Citations:    Fields:    Translation:Humans
  98. Dimaio SP, Archip N, Hata N, Talos IF, Warfield SK, Majumdar A, Mcdannold N, Hynynen K, Morrison PR, Wells WM, Kacher DF, Ellis RE, Golby AJ, Black PM, Jolesz FA, Kikinis R. Image-guided neurosurgery at Brigham and Women's Hospital. IEEE Eng Med Biol Mag. 2006 Sep-Oct; 25(5):67-73. PMID: 17020201.
    Citations: 11     Fields:    Translation:Humans
  99. Custo A, Wells WM, Barnett AH, Hillman EM, Boas DA. Effective scattering coefficient of the cerebral spinal fluid in adult head models for diffuse optical imaging. Appl Opt. 2006 Jul 01; 45(19):4747-55. PMID: 16799690.
    Citations: 54     Fields:    Translation:Humans
  100. Wu Y, Warfield SK, Tan IL, Wells WM, Meier DS, van Schijndel RA, Barkhof F, Guttmann CR. Automated segmentation of multiple sclerosis lesion subtypes with multichannel MRI. Neuroimage. 2006 Sep; 32(3):1205-15. PMID: 16797188.
    Citations: 37     Fields:    Translation:Humans
  101. Pohl KM, Fisher J, Grimson WE, Kikinis R, Wells WM. A Bayesian model for joint segmentation and registration. Neuroimage. 2006 May 15; 31(1):228-39. PMID: 16466677.
    Citations: 81     Fields:    Translation:Humans
  102. 35. Zöllei L, Wells W. . Multi-modal Image Registration Using Dirichlet-encoded Prior Information. 2006.
  103. Warfield SK, Zou KH, Wells WM. Validation of image segmentation by estimating rater bias and variance. Med Image Comput Comput Assist Interv. 2006; 9(Pt 2):839-47. PMID: 17354851.
    Citations: 8     Fields:    Translation:Humans
  104. Pohl KM, Fisher J, Shenton M, McCarley RW, Grimson WE, Kikinis R, Wells WM. Logarithm odds maps for shape representation. Med Image Comput Comput Assist Interv. 2006; 9(Pt 2):955-63. PMID: 17354865; PMCID: PMC2994060.
    Citations: 26     Fields:    Translation:Humans
  105. Zou KH, Greve DN, Wang M, Pieper SD, Warfield SK, White NS, Manandhar S, Brown GG, Vangel MG, Kikinis R, Wells WM. Reproducibility of functional MR imaging: preliminary results of prospective multi-institutional study performed by Biomedical Informatics Research Network. Radiology. 2005 Dec; 237(3):781-9. PMID: 16304101; PMCID: PMC1351264.
    Citations: 46     Fields:    Translation:Humans
  106. Tsai A, Wells WM, Warfield SK, Willsky AS. An EM algorithm for shape classification based on level sets. Med Image Anal. 2005 Oct; 9(5):491-502. PMID: 16046181.
    Citations: 6     Fields:    Translation:Humans
  107. Pohl KM, Fisher J, Kikinis R, Grimson WEL, Wells WM. Shape Based Segmentation of Anatomical Structures in Magnetic Resonance Images. Comput Vis Biomed Image Appl (2005). 2005 Oct; 3765:489-498. PMID: 28664197; PMCID: PMC5486153.
    Citations: 8     
  108. 32. Pohl K, Fisher J, Kikinis R, Grimson WEL, and Wells W. . Shape Based Segmentation of Anatomical Structures in Magnetic Resonance Images. Proc ICCV 2005. 2005.
  109. Cosman ER, Wells WM. Bayesian population modeling of effective connectivity. Inf Process Med Imaging. 2005; 19:39-51. PMID: 17354683.
    Citations:    Fields:    Translation:Humans
  110. 34. Pohl K, Fisher J, Levitt J, Shenton M, Kikinis R, Grimson WEL, and Wells W. . A Unifying Approach to Registration, Segmentation, and Intensity Correction. Proc. MICCAI 2005. 2005; LNCS vol. 374:310-318.
  111. Pohl KM, Fisher J, Levitt JJ, Shenton ME, Kikinis R, Grimson WE, Wells WM. A unifying approach to registration, segmentation, and intensity correction. Med Image Comput Comput Assist Interv. 2005; 8(Pt 1):310-8. PMID: 16685860.
    Citations: 18     Fields:    Translation:Humans
  112. 33. Haker S, Wells W, Warfield S, Talos IF, Bhagwat J, Goldberg-Zimring D, Mian A, Ohno-Machado L, Zou K. . Classifiers Using Their Receiver Operating Characteristics and Maximum Likelihood Estimation. Proc MICCAI 2005. 2005; LNCS 3749:506-514.
  113. 31. Zollei L, Learned-Miller E, Grimson WEL, Wells W. . Efficient Population Registration of 3D Data. Proc ICCV 2005. 2005.
  114. Haker S, Wells WM, Warfield SK, Talos IF, Bhagwat JG, Goldberg-Zimring D, Mian A, Ohno-Machado L, Zou KH. Combining classifiers using their receiver operating characteristics and maximum likelihood estimation. Med Image Comput Comput Assist Interv. 2005; 8(Pt 1):506-14. PMID: 16685884.
    Citations: 6     Fields:    
  115. 30. Cosman E, Wells W. Bayesian Population Modeling of Effective Connectivity. 2005.
  116. 23. Viola P and Wells W. . Alignment by Maximization of Mutual Information. PROC. 5th ICCV. 2005.
  117. Warfield SK, Haker SJ, Talos IF, Kemper CA, Weisenfeld N, Mewes AU, Goldberg-Zimring D, Zou KH, Westin CF, Wells WM, Tempany CM, Golby A, Black PM, Jolesz FA, Kikinis R. Capturing intraoperative deformations: research experience at Brigham and Women's Hospital. Med Image Anal. 2005 Apr; 9(2):145-62. PMID: 15721230.
    Citations: 24     Fields:    Translation:Humans
  118. Pohl KM, Warfield SK, Kikinis R, Grimson WEL, Wells WM. Coupling Statistical Segmentation and PCA Shape Modeling. Med Image Comput Comput Assist Interv. 2004 Sep; 3216:151-159. PMID: 28603793; PMCID: PMC5464761.
    Citations: 2     Fields:    
  119. Ellsmere J, Stoll J, Wells W, Kikinis R, Vosburgh K, Kane R, Brooks D, Rattner D. A new visualization technique for laparoscopic ultrasonography. Surgery. 2004 Jul; 136(1):84-92. PMID: 15232543.
    Citations: 5     Fields:    Translation:HumansAnimals
  120. Warfield SK, Zou KH, Wells WM. Simultaneous truth and performance level estimation (STAPLE): an algorithm for the validation of image segmentation. IEEE Trans Med Imaging. 2004 Jul; 23(7):903-21. PMID: 15250643.
    Citations: 521     Fields:    Translation:Humans
  121. Zou KH, Wells WM, Kikinis R, Warfield SK. Three validation metrics for automated probabilistic image segmentation of brain tumours. Stat Med. 2004 Apr 30; 23(8):1259-82. PMID: 15083482.
    Citations: 27     Fields:    Translation:Humans
  122. Zou KH, Warfield SK, Bharatha A, Tempany CM, Kaus MR, Haker SJ, Wells WM, Jolesz FA, Kikinis R. Statistical validation of image segmentation quality based on a spatial overlap index. Acad Radiol. 2004 Feb; 11(2):178-89. PMID: 14974593.
    Citations: 390     Fields:    Translation:Humans
  123. 29. Pohl K, Warfield S, Kikinis R, Grimson W, Wells W. . Coupling Statistical Segmentation and PCA Shape Modeling. Proceedings MICCAI. 2004.
  124. 28. Cosman E, Fisher J, Wells W. . MAP Activity Detection in fMRI using a GLM with an Ising Spatial Prior. 2004.
  125. 27. Gan R, Wu J, Chung A, Yu S, Wells W. Image registration based on Kullback-Leibler distance. 2004.
  126. Gering D, O'Donnell L, Kikinis R, Wells W III, Grimson WE, Tanacs A, Teich K. http://slicer.org. 2004.
  127. Chan I, Wells W, Mulkern RV, Haker S, Zhang J, Zou KH, Maier SE, Tempany CM. Detection of prostate cancer by integration of line-scan diffusion, T2-mapping and T2-weighted magnetic resonance imaging; a multichannel statistical classifier. Med Phys. 2003 Sep; 30(9):2390-8. PMID: 14528961.
    Citations: 52     Fields:    Translation:HumansCTClinical Trials
  128. Zöllei L, Fisher JW, Wells WM. A unified statistical and information theoretic framework for multi-modal image registration. Inf Process Med Imaging. 2003 Jul; 18:366-77. PMID: 15344472.
    Citations: 6     Fields:    Translation:Humans
  129. Fan A, Wells WM, Fisher JW, Cetin M, Haker S, Mulkern R, Tempany C, Willsky AS. A unified variational approach to denoising and bias correction in MR. Inf Process Med Imaging. 2003 Jul; 18:148-59. PMID: 15344454.
    Citations: 2     Fields:    Translation:Humans
  130. Tsai A, Yezzi A, Wells W, Tempany C, Tucker D, Fan A, Grimson WE, Willsky A. A shape-based approach to the segmentation of medical imagery using level sets. IEEE Trans Med Imaging. 2003 Feb; 22(2):137-54. PMID: 12715991.
    Citations: 89     Fields:    Translation:Humans
  131. L Zollei, J. Fisher, W. Wells. A Unified Statistical and Information Theoretic Framework for Multi-modal Image Registration. Image Processing in Medical Imaging. 2003.
  132. Soman S, Chung AC, Grimson WE, Wells WM. Rigid Registration of Echoplanar and Conventional Magnetic Resonance Images by Minimizing the Kullback-Leibler Distance. Biomed Image Registration. 2003; 2717:181-190. PMID: 25745642; PMCID: PMC4347537.
    Citations:    
  133. J Ellsmere, J Stoll, D Rattner, D Brooks, R Kane, W Wells, R Kikinis, K Vosburgh. A navigation system for augmenting laparoscopic ultrasound. Computing and Computer Assisted Intervention. 2003.
  134. A Tsai, W Wells, C Tempany, E Grimson, A Willsky. Coupled Multi-Shape Model and Mutual Information for Medical Image Segmentation. Image Processing in Medical Imaging. 2003.
  135. HM Chan, A Chung, S Yu, A Norbash, W Wells. Multi-modal image registration by minimizing Kullback-Leibler distance between expected and observed joint class histograms. 2003.
  136. S Warfield, F Talos, C Kemper, E Cosman, A Tei, M Ferrant, B Macq, W Wells, P McL Black, F Jolesz, R Kikinis. Augmenting Intraoperative MRI with Preoperative fMRI and DTI by Biomechanical Siulation of Brain Deformation. 2003.
  137. S Soman, A Chung, W Grimson, W Wells. Echoplanar Image (EPI) to MRI Rigid Rigid Registration by Minimizing Kullback-Leibler Distance. Proceedings of the Second InternationalWorkshop on Biomedical Image Registration. 2003.
  138. IF Talos, L O’Donnell, CF Westin, S Warfield, W Wells, SS Yoo, L Panych, A Golby, H Mamata, S Maier, P Ratiu, C Guttmann, P McL Black, F Jolesz and R Kikinis. Diffusion Tensor and Functional MRI Fusion with Anatomical MRI for Image Guided Neurosurgery. 2003.
  139. Nabavi A, Gering DT, Kacher DF, Talos IF, Wells WM, Kikinis R, Black PM, Jolesz FA. Surgical navigation in the open MRI. Acta Neurochir Suppl. 2003; 85:121-5. PMID: 12570147.
    Citations: 4     Fields:    Translation:Humans
  140. A Fan, J Fisher, M Cedolin, W Wells. A Unified Variational Approach to Denoising and Bias Correction in MR. Image Processing in Medical Imaging. 2003.
  141. Pohl KM, Wells WM, Guimond A, Kasai K, Shenton ME, Kikinis R, Grimson WEL, Warfield SK. Incorporating Non-rigid Registration into Expectation Maximization Algorithm to Segment MR Images. Med Image Comput Comput Assist Interv. 2002 Sep; 2488:564-571. PMID: 28626841.
    Citations: 12     Fields:    
  142. 25. Pohl K, Wells W, Guimond A, Kasai K, Shenton M, Kikinis R, Grimson WEL and Warfield S. Incorporating Non-Rigid Registration into Expectation Maximization Algorithm to Segment MR Images. 2002.
  143. D. Nain, S. Haker, W. E.. L.. Grimson, E. Cosman Jr, W. W. Wells, H. Ji, R. Kikinis and C. F. Westin. Intra-Patient Prone to Supine Colon Registration for Synchronized Virtual Colonoscopy. Fifth International Conference on Medical Image Computing and Computer Assisted Intervention. 2002.
  144. K. M Pohl, W. M. Wells, A. Guimond, K. Kasai, M. E. Shenton, R. Kikinis, W. E. L. Grimson and S. K. Warfield. Incoperating Non-Rigid Registration into Expectation Maximization Algorithm to Segment MR Images. Fifth International Conference on Medical Image Computing and Computer Assisted Intervention. 2002.
  145. S. J. Timoner, P. Golland, R. Kikinis, M. E. Shenton, W. E. L. Grimson and W. M. Wells III. Performance Issues in Shape Classification. Fifth International Conference on Medical Image Computing and Computer Assisted Intervention. 2002.
  146. S. K. Warfield, K. H. Zou and W. M. Wells. Validation of Image Segmentation and Expert Quality with an Expectation-Maximization Algorithm. Fifth International Conference on Medical Image Computing and Computer Assisted Intervention. 2002.
  147. K Pohl, W Wells, A Guimond, K Kasai, M Shenton, R Kikinis, W Grimson, SWarfield. Incorporating Non-Rigid Registration into Expectation-Maximization Algorithm to Segment MR Images. Fifth International Conference on Medical Image Computing and Computer Assisted Intervention. 2002.
  148. K. H. Zou, W. M. Wells III, M. R. Kaus, R. Kikinis, F. A Jolesz and S. K. Warfield. Statistical Validation of Automated Probabilistic Segmentation Against Composite Latent Expert Ground Truth in MR Imaging of Brain Tumors. Fifth International Conference on Medical Image Computing and Computer Assisted Intervention. 2002.
  149. Warfield S, Zou K, Kaus M, Wells W. Simultaneous Validation of Image Segmentation and Assessment of Expert Quality. Jeffrey Fessler and Michael Vannier, editors, International symposium on Biomedical Imaging: Macro to Nano. 2002; 1494:1-4.
  150. A. C. S. Chung, W. M. Wells III, A. Norbash and W. E. L. Grimson. Multi-Modal Image Registration by Minimising Kullback-Leibler Distance. Fifth International Conference on Medical Image Computing and Computer Assisted Intervention. 2002.
  151. Gering DT, Nabavi A, Kikinis R, Hata N, O'Donnell LJ, Grimson WE, Jolesz FA, Black PM, Wells WM. An integrated visualization system for surgical planning and guidance using image fusion and an open MR. J Magn Reson Imaging. 2001 Jun; 13(6):967-75. PMID: 11382961.
    Citations: 101     Fields:    Translation:Humans
  152. Nabavi A, Black PM, Gering DT, Westin CF, Mehta V, Pergolizzi RS, Ferrant M, Warfield SK, Hata N, Schwartz RB, Wells WM, Kikinis R, Jolesz FA. Serial intraoperative magnetic resonance imaging of brain shift. Neurosurgery. 2001 Apr; 48(4):787-97; discussion 797-8. PMID: 11322439.
    Citations: 95     Fields:    Translation:Humans
  153. 24. Warfield S, Rexilius J, Huppi P, Inder T, Miller E, Wells W, Zientara G, Jolesz F, Kikinis R. A Binary Measure to Assess Nonrigid Registration Algorithms. Proceedings MICCAI 2001. 2001.
  154. L Zollei, A Norbash, W Grimson, W Wells. 2D-3D Rigid Registration of Fluoroscopy and CT Images Using Mutual Information and Sparsely Sampled Histograms as Density Estimators. Proceedings 2001 IEEE conference on Computer Vision and Pattern Recogntion. 2001.
  155. S Timoner, E Grimson, R Kikinis, W Wells. Fast Linear Elastic Matching without Landmarks. Proceedings of the fourth international conference on Medical Image Computing and Computer Assisted Intervention,. 2001.
  156. A Tsai, A Yezzi, W Wells, C Tempany, A Fan, E Grimson. A Willsky Model-based Curve Evolution Techniques for Image Segmentation. Proceedings 2001 IEEE conference on Computer Vision and Pattern Recogntion. 2001.
  157. J Fisher, E Cosman, C Wible, W Wells. Adaptive Entropy Rates for fMRI Time-Series Analysis. Proceedings of the fourth international conference on Medical Image Computing and Computer Assisted Intervention,. 2001.
  158. Hata N, Nabavi A, Wells WM, Warfield SK, Kikinis R, Black PM, Jolesz FA. Three-dimensional optical flow method for measurement of volumetric brain deformation from intraoperative MR images. J Comput Assist Tomogr. 2000 Jul-Aug; 24(4):531-8. PMID: 10966182.
    Citations: 6     Fields:    Translation:Humans
  159. A. Lakshmi-Ratan, W. Grimson, W. Wells. Object Detection and Localization by Dynamic Template Warping. International Journal of Computer Vision. 2000; 36:131-148.
  160. ME Leventon, O Faugeras, WE Grimson, WM Wells. Level Set Based Segmentation with Intensity and Curvature Priors. Proceedings Mathematical Methods in Biomedical Image Processing. 2000.
  161. J Kim, J Fisher, A Tsai, C Wible, A Willsky W Wells. Incorporating spatial priors into an information theoretic approach for fmri data analysis. Proceedings of the third international conference on Medical Image Computing and Computer Assisted Intervention. 2000.
  162. M Kaus, A Nabavi, C Mamisch, W Wells, FA Jolesz, R Kikinis, and S Warfield. Simulation of Corticospinal Tract Displacement in Patients with Brain Tumors. Proceedings of the third international conference on Medical Image Computing and Computer Assisted Intervention. 2000.
  163. A Nabavi, W Wells, R Schwartz, R Zimmermann, M Anderson, R Kikinis, F Jolesz, PM Black, E Alexander. Image Fusion of SPECT and MR and 3D Visualization for Surgical Planning (Poster presented at Annual Meeting of American Association of Neurological Surgeons, reprinted in Neurosurgery). Neurosurgery. 2000.
  164. N Hata, A Nabavi, S Warfield, W Wells, R Kikinis. Three-Dimensional Optical Flow Method for Measurement of Volumetric Brain Deformation from Intraoperative MR Images. J Compt Assist Tomogra. 2000; 24:531-538.
  165. Nabavi A, Mamisch CT, Gering DT, Kacher DF, Pergolizzi RS, Wells WM, Kikinis R, Black PM, Jolesz FA. Image-guided therapy and intraoperative MRI in neurosurgery. Minim Invasive Ther Allied Technol. 2000; 9(3-4):277-86. PMID: 20156025.
    Citations: 3     Fields:    Translation:Humans
  166. G. Ettinger, R. Kikinis, W.E.L. Grimson, T. Lozano-P´erez, W Wells, S. White. “System and method of registration of three-dimensional data sets”. 1999.
  167. Kikinis R, Guttmann CR, Metcalf D, Wells WM, Ettinger GJ, Weiner HL, Jolesz FA. Quantitative follow-up of patients with multiple sclerosis using MRI: technical aspects. J Magn Reson Imaging. 1999 Apr; 9(4):519-30. PMID: 10232509.
    Citations: 16     Fields:    Translation:Humans
  168. N. Hata, Arya Nabavi, Simon Warfield, William Wells, Ron Kikinis, Ferenc A. Jolesz. A Volumetric Optical Flow Method for Measurement of Brain Deformation from Intraoperative Magnetic Resonance Images. Proceedings of the second international conference on Medical Image Computing and Computer Assisted Intervention. 1999.
  169. Wible CG, Pare-Blagoev J, Kacher D, Sperling R, Nabavi A, Chatzidakis E, Black P, Wells W, Jolesz F, Stieg FP, Kikinis R, Alexander E, Robert W. McCarley. Presurgical mapping of language, motor and visual regions: initial experience and comparison to intra-operative stimulation. Human Brain Mapping Conference. 1999; 708.
  170. D. Gering, W. Wells. Object Modeling using Tomography and Photographic Images. Proceedings of the 1999 IEEE Workshop on Multi-View Modeling and Analysis of Visual Scenes. 1999.
  171. D. Gering, A. Nabavi, R. Kikinis, W. Grimson, N. Hata, P. Everett, F. Jolesz, W. Wells. An Integrated Visualization System for Surgical Planning and Guidance using Image Fusion and Interventional Imaging. Proceedings of the second international conference on Medical Image Computing and Computer Assisted Intervention. 1999.
  172. A. Tsai, J. Fisher, C. Wible, W. Wells, J. Kim, A. Willsky. Analysis of Functional MRI Data Using Mutual Information. Proceedings of the second international conference on Medical Image Computing and Computer Assisted Intervention,. 1999.
  173. A Nabavi, D Gering, N Hata,WWells, V Mehta, D Kacher, R Pergolizzi, E Chadtzidakis, E Alexander, P Stieg, R Kikinis, F Jolesz, PM Black. Updated three-dimensional visualization during realtime image-guided surgery with the 3DSlicer. Proceedings of the Congress of Neurological Surgeons. 1999.
  174. Wible CG, Potts GF, Weinstein DM, Kacher D, Wells W, Sperling R, Cavenaugh G, Yoo SS, Shenton ME, Fischer IA, Leventon ME, Gugino LD, Kikinis R, Jolesz FA, McCarley RW. Co-registration and comparison of functional localization using results from functional MRI (FMRI), transcranial magnetic stimulation (TMS), and ERP with bioelectrically modeled source localization. (Poster presented at the Society for Neuroscience 28th Annual Meeting). Society for Neuroscience Abstracts. 1998; 24 (1), abs. 168.11.
  175. Moharir VM, Fried MP, Vernick DM, Janecka IP, Zahajsky J, Hsu L, Lorensen WE, Anderson M, Wells WM, Morrison P, Kikinis R. Computer-assisted three-dimensional reconstruction of head and neck tumors. Laryngoscope. 1998 Nov; 108(11 Pt 1):1592-8. PMID: 9818811.
    Citations: 2     Fields:    Translation:Humans
  176. T. Kapur, P. Beardsley, S. Gibson, W. Grimson, W. Wells. Model Based Segmentation of Clinical Knee MRI. Proceedings of the IEEE Intl. Workshop on Model-Based 3D Image Analysis. 1998.
  177. O. Wu, A Sorensen, D. Bakker, F. Buonano, W. Copen R. Gonzalez, C. Harmath, I. Ostergaard, B. Rosen, L. Schwamm, G. Rorkari, R.Weisskoff, W. Wells, K. Yamada, G. Zahanchuk, W. Koroshetz. Evaluation of Diffusionand Perfusion-based Predictive Models of Tissue Outcome in Hyperacute Human Cerebral Ischemia. Sydney Australia, Sixth Meeting of the ISMRM. 1998.
  178. T. Kapur, W.E.L. Grimson, R. Kikinis and W.M. Wells. Enhanced Spatial Priors for Segmentation of Magnetic Resonance Imagery. Proceedings of the first international conference on Medical Image Computing and Computer Assisted Intervention. 1998.
  179. M Leventon, W Grimson, W Wells. Multi-Modal Volume Registration Using Joint Intensity Distributions. Proceedings of the first international conference on Medical Image Computing and Computer Assisted Intervention. 1998.
  180. N. Hata, T. Dohi, S. Warfield, W. Wells III, R. Kikinis and F.A. Jolesz. Multimodality Deformable Registration of Pre- and Intraoperative Images for MRI-guided Brain Surgery. Proceedings of the first international conference on Medical Image Computing and Computer Assisted Intervention. 1998.
  181. A. Lakshmi-Ratan, W. Grimson, W. Wells. Object Detection and Localization by Dynamic Template Warping. Proceedings of the Sixth International Conference on Computer Vision, IEEE. 1998.
  182. Held K, Rota Kops E, Krause BJ, Wells WM, Kikinis R, Müller-Gärtner HW. Markov random field segmentation of brain MR images. IEEE Trans Med Imaging. 1997 Dec; 16(6):878-86. PMID: 9533587.
    Citations: 50     Fields:    Translation:Humans
  183. W. Grimson, G. Ettinger, T. Kapur, M. Leventon, W. Wells, R. Kikinis. Utilizing Segmented MRI Data in Image-Guided Surgery. Int. J. Pat. Recog. and Artif. Intell. 1997; 8:1367-1397.
  184. Wells W. Statistical approaches to feature-based object recognition. International Journal of Computer Vision. 1997; 21:63-98.
  185. Berger JW, Leventon ME, Hata N, Wells WM, Kikinis R. Design considerations for a computer-vision-enabled ophthalmic augmented reality environment. Proceedings of the First Joint Conference on CVRMed II and MRCAS III. 1997.
  186. Viola P, Wells WM. Alignment by maximization of mutual information. International Journal of Computer Vision. 1997; 24:137-154.
  187. PM Black, R Kikinis, S Nakajima, M Leventon, G Ettinger, E Grimson, W Wells, A Hideki. Three-Dimensional Reconstruction, Cortical Mapping, and LED-Based Navigation for Brain Tumor Surgery. (Poster presented at Annual Meeting of American Association of Neurological Surgeons, reprinted in Neurosurgery). Neurosurgery. 1997.
  188. Wells WM, Kikinis R. Correction of Magnetic Resonance imager intensity inhomogeneities using tissue properties. 1996.
  189. G. Ettinger, R. Kikinis, W.E.L. Grimson, T. Lozano-P´erez, W Wells, S. White. “System and method of registration of three-dimensional data sets including anatomical body data sets”. 1996.
  190. Kapur T, Grimson WE, Wells WM, Kikinis R. Segmentation of brain tissue from magnetic resonance images. Med Image Anal. 1996 Jun; 1(2):109-27. PMID: 9873924.
    Citations: 31     Fields:    Translation:Humans
  191. Wells WM, Viola P, Atsumi H, Nakajima S, Kikinis R. Multi-modal volume registration by maximization of mutual information. Med Image Anal. 1996 Mar; 1(1):35-51. PMID: 9873920.
    Citations: 313     Fields:    Translation:Humans
  192. Hata N, Wells WM, Halle M, Nakajima S, Viola P, Kikinis R, Jolesz F. Image guided microscopic surgery system using mutual-information based registration. Proceedings of the Fourth Conference on Visualization in Biomedical Computing, Hamburg, Germany. 1996; 317-326.
  193. Grimson WL, Ettinger GJ, White SJ, Lozano-Perez T, Wells WM, Kikinis R. An automatic registration method for frameless stereotaxy, image guided surgery, and enhanced reality visualization. IEEE Trans Med Imaging. 1996; 15(2):129-40. PMID: 18215896.
    Citations: 21     Fields:    
  194. Wells WM, Kikinis R, Grimson WEL, Jolesz F. Adaptive segmentation of MRI data. IEEE Transactions on Medical Imaging. 1996; 15:429-442.
  195. Kapur T, Grimson WEL, Wells WM, Kikinis R. Segmentation of brain tissue from magnetic resonance images. Segmentation of brain tissue from magnetic resonance images. 1996; 1:109-128.
  196. Wells WM, Grimson WL, Kikinis R, Jolesz FA. Adaptive segmentation of MRI data. IEEE Trans Med Imaging. 1996; 15(4):429-42. PMID: 18215925.
    Citations: 161     Fields:    
  197. Viola P, Wells WM. Alignment by maximization of mutual information. Proceedings of the Fifth International Conference on Computer Vision. 1995.
  198. Wells WM, Viola P, Kikinis R. Multi-modal volume registration by maximization of mutual information. Proceedings of the Second International Symposium on Medical Robotics and Computer Assisted Surgery. 1995.
  199. Baker J, Wells WM. Multiresolution statistical object recognition. Proceedings of the Image Understanding Workshop. 1995.
  200. Warfield S, Dengler J, Zaers J, Guttmann CR, Wells WM, Ettinger GJ, Hiller J, Kikinis R. Automatic identification of gray matter structures from MRI to improve the segmentation of white matter lesions. J Image Guid Surg. 1995; 1(6):326-38. PMID: 9080353.
    Citations: 17     Fields:    Translation:Humans
  201. Kikinis R, Gleason PL, Lorensen W, Wells WM, Grimson WEL, Lozano-P´erez T, Ettinger GJ, White SJ, Jolesz F. Image guidance techniques for neurosurgery. Proceedings of the third conference on Visualization in Biomedical Computing. 1994.
  202. Grimson WEL, Lozano-P´erez T., Wells WM, Ettinger GJ, White S, Kikinis R. Automated registration for enhanced reality visualization in surgery. Proceedings of the First International Symposium on Medical Robotics and Computer Assisted Surgery. 1994.
  203. Wells WM, Kikinis R, Grimson W, Jolesz F. In-vivo intensity correction and segmentation of magnetic resonance image data. Technical Report, AAAI Spring Symposium on Applications of Computer Vision in Medical Image Processing. 1994.
  204. Grimson WEL, Lozano-P´erez T, Wells WM, Ettinger, GJ, White SJ, Kikinis R. An automatic registration method for frameless stereotaxy, image guided surgery, and enhanced reality visualizatio. Proceedings of the IEEE Computer Society Conference on Computer Vision and Pattern Recognition. 1994.
  205. Wells WM, Kikinis R, Grimson WEL, Jolesz F. Adaptive segmentation of MRI data. Proceedings of the First International Conference on Computer Vision, Virtual Reality and Robotics in Medicine. 1994.
  206. Wells WM, Kikinis R, Grimson WEL, Jolesz F. Statistical intensity correction and segmentation of magnetic resonance image data. Proceedings of the third conference on Visualization in Biomedical Computing. 1994.
  207. Ettinger G, Grimson WEL, Lozano-P´erez T, Wells WM, White SJ, Kikinis R. Automatic registration for multiple sclerosis change detection. Proceedings of the IEEE Workshop on Biomedical Image Analysis. 1994.
  208. Grimson W, Ettinger GJ, White SJ, Gleason PL, Lozano-P´erez T, Wells WM, Kikinis R. Evaluating and validating an automated registration system for enhanced reality visualization in surgery. Proceedings of the First International Conference on Computer Vision, Virtual Reality and Robotics in Medicine. 1994.
  209. Wells WM. Statistical object recognition with the expectation-maximization algorithm in range-derived features. Proceedings of the Image Understanding Workshop. 1993.
  210. Wells WM. Statistical Object Recognition. 1992.
  211. Wells WM. MAP model matching. Proceedings of the IEEE Computer Society Conference on Computer Vision and Pattern Recognition. 1991.
  212. Menon M, Wells WM. Massively parallel image restoration. Proceedings of the International Joint Conference on Neural Networks. 1990.
  213. Wells WM. A statistical approach to model matching. Proceedings of the SPIE Symposium on Advances in Intelligent Systems. 1990.
  214. Flynn AM, Brooks RA, Wells WM, Barrett DS. Intelligence for miniature robots. Sensors and Actuators. 1989; 20:187-196.
  215. Wells WM. Visual estimation of 3-d line segments from motion – a mobile robot vision system. IEEE Trans. on Robotics and Automation. 1989; 5:820-825.
  216. Flynn AM, Brooks AM, Wells WM, Barrett DS. The world’s largest one cubic inch robot. Proc. 2nd. IEEE Conf. on Micro Electro Mechanical Systems. 1988; 98-101.
  217. Wells W. Visual estimation of 3-d line segments from motion – a mobile robot vision system. Proc. Sixth National Conf. on A.I. 1987.
  218. Wells WM. Efficient synthesis of gaussian filters by cascaded uniform filters. IEEE Trans. Pattern Anal. Mach. Intell. 1986; 8:234-239.
  219. N Buholz, C Gillard, W Wells. “Absolute Distance Sensor”. 1985.
  220. Wells WM, Henriquez C, Diaz LQ. [Mucopolysaccharidosis and pregnancy]. Rev Chil Obstet Ginecol. 1975; 40(3):157-61. PMID: 821107.
    Citations:    Fields:    Translation:Humans
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