Harvard Catalyst Profiles

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Biju Parekkadan, Ph.D.

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Research
The research activities and funding listed below are automatically derived from NIH ExPORTER and other sources, which might result in incorrect or missing items. Faculty can login to make corrections and additions.
  1. R01GM127353 (LARMAN, HARRY BENJAMIN) Aug 15, 2018 - Jul 31, 2022
    NIH
    A Functional genomics platform with integrated library cloning and molecular display
    Role: Co-Principal Investigator
  2. R21AI134116 (PAREKKADAN, BIJU) May 14, 2018 - Apr 30, 2021
    NIH
    Theranostic approach to transplant rejection using engineered cell biosensors
    Role: Principal Investigator
  3. R43DK093285 (TILLES, ARNO W) Apr 1, 2012 - Mar 31, 2015
    NIH
    Cellular Device for the Treatment of Acute Liver Failure
    Role: Principal Investigator
  4. R01EB012521 (PAREKKADAN, BIJU) Aug 1, 2011 - Sep 14, 2018
    NIH
    Artificial, Humanized Stem Cell Niches
    Role: Principal Investigator
  5. R44DK085766 (TILLES, ARNO W) Jun 15, 2010 - Jul 31, 2018
    NIH
    Transforming Dialysis into a Controlled Drug Delivery System for Stem Cell Derive
    Role: Co-Principal Investigator

Bibliographic
Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
  1. Shafiee S, Gelebart P, Popa M, Helles√ły M, Hovland R, Brendsdal Forthun R, Lee J, Tohyama K, Molven A, Parekkadan B, Tore Gjertsen B, Olsnes Kittang A, McCormack E. Preclinical characterisation and development of a novel myelodysplastic syndrome-derived cell line. Br J Haematol. 2021 Mar 09. PMID: 33686650.
    Citations:    Fields:    
  2. Credle JJ, Gunn J, Sangkhapreecha P, Monaco DR, Zheng XA, Tsai HJ, Wilbon A, Morgenlander WR, Dong Y, Jayaraman S, Tosi L, Parekkadan B, Baer AN, Roederer M, Bloch EM, Tobian AAR, Zyskind I, Silverberg JI, Rosenberg AZ, Cox AL, Lloyd T, Mammen AL, Larman HB. Neutralizing IFNL3 Autoantibodies in Severe COVID-19 Identified Using Molecular Indexing of Proteins by Self-Assembly. bioRxiv. 2021 Mar 03. PMID: 33688651.
    Citations:    
  3. Patel RS, Lucas J, Timmins LM, Mukundan S, Teryek M, Bhatt R, Beaulieu A, Parekkadan B. Non-invasive image-based cytometry for high throughput NK cell cytolysis analysis. J Immunol Methods. 2021 Apr; 491:112992. PMID: 33577777.
    Citations:    Fields:    
  4. O'Rourke B, Nguyen S, Tilles AW, Bynum JA, Cap AP, Parekkadan B, Barcia RN. Mesenchymal stromal cell delivery via an ex vivo bioreactor preclinical test system attenuates clot formation for intravascular application. Stem Cells Transl Med. 2021 Feb 01. PMID: 33527780.
    Citations:    Fields:    
  5. Allen A, Vaninov N, Li M, Nguyen S, Singh M, Igo P, Tilles AW, O'Rourke B, Miller BLK, Parekkadan B, Barcia RN. Author Correction: Mesenchymal Stromal Cell Bioreactor for Ex Vivo Reprogramming of Human Immune Cells. Sci Rep. 2020 09 17; 10(1):15451. PMID: 32943743.
    Citations:    Fields:    
  6. Tamayo AG, Shukor S, Burr A, Erickson P, Parekkadan B. Tracking leukemic T-cell transcriptional dynamics in vivo with a blood-based reporter assay. FEBS Open Bio. 2020 Sep; 10(9):1868-1879. PMID: 32710494.
    Citations:    Fields:    
  7. Allen A, Vaninov N, Li M, Nguyen S, Singh M, Igo P, Tilles AW, O'Rourke B, Miller BLK, Parekkadan B, Barcia RN. Mesenchymal Stromal Cell Bioreactor for Ex Vivo Reprogramming of Human Immune Cells. Sci Rep. 2020 06 23; 10(1):10142. PMID: 32576889.
    Citations: 1     Fields:    Translation:HumansCells
  8. Aijaz A, Trawinski D, McKirgan S, Parekkadan B. Non-invasive cell counting of adherent, suspended and encapsulated mammalian cells using optical density. Biotechniques. 2020 01; 68(1):35-40. PMID: 31870165.
    Citations:    Fields:    Translation:HumansAnimalsCells
  9. Chin LY, Carroll C, Raigani S, Detelich DM, Tessier SN, Wojtkiewicz GR, Schmidt SP, Weissleder R, Yeh H, Uygun K, Parekkadan B. Ex vivo perfusion-based engraftment of genetically engineered cell sensors into transplantable organs. PLoS One. 2019; 14(12):e0225222. PMID: 31790444.
    Citations: 3     Fields:    Translation:HumansAnimalsCells
  10. Timmins LM, Patel RS, Teryek MS, Parekkadan B. Real-time transfer of lentiviral particles by producer cells using an engineered coculture system. Cytotechnology. 2019 Oct; 71(5):1019-1031. PMID: 31515650.
    Citations:    Fields:    
  11. Burr A, Parekkadan B. Kinetics of MSC-based enzyme therapy for immunoregulation. J Transl Med. 2019 08 13; 17(1):263. PMID: 31409424.
    Citations: 1     Fields:    Translation:HumansCells
  12. Shukor S, Tamayo A, Tosi L, Larman HB, Parekkadan B. Quantitative assessment of LASSO probe assembly and long-read multiplexed cloning. BMC Biotechnol. 2019 07 24; 19(1):50. PMID: 31340783.
    Citations:    Fields:    Translation:Cells
  13. Li M, Chin LY, Shukor S, Tamayo AG, Maus MV, Parekkadan B. Effects of intermittent T-cell cluster disaggregation on proliferative capacity and checkpoint marker expression. Autoimmunity. 2019 05; 52(3):102-107. PMID: 31238751.
    Citations:    Fields:    Translation:HumansCells
  14. Liu J, Shukor S, Li S, Tamayo A, Tosi L, Larman B, Nanda V, Olson WK, Parekkadan B. Computational Simulation of Adapter Length-Dependent LASSO Probe Capture Efficiency. Biomolecules. 2019 05 22; 9(5). PMID: 31121947.
    Citations: 1     Fields:    
  15. Aijaz A, Vaninov N, Allen A, Barcia RN, Parekkadan B. Convergence of Cell Pharmacology and Drug Delivery. Stem Cells Transl Med. 2019 09; 8(9):874-879. PMID: 31091020.
    Citations: 2     Fields:    Translation:HumansCells
  16. Li M, Chin LY, Shukor S, Tamayo A, Maus MV, Parekkadan B. Closed loop bioreactor system for the ex vivo expansion of human T cells. Cytotherapy. 2019 01; 21(1):76-82. PMID: 30497956.
    Citations: 1     Fields:    Translation:HumansCells
  17. Knoblich K, Cruz Migoni S, Siew SM, Jinks E, Kaul B, Jeffery HC, Baker AT, Suliman M, Vrzalikova K, Mehenna H, Murray PG, Barone F, Oo YH, Newsome PN, Hirschfield G, Kelly D, Lee SP, Parekkadan B, Turley SJ, Fletcher AL. The human lymph node microenvironment unilaterally regulates T-cell activation and differentiation. PLoS Biol. 2018 09; 16(9):e2005046. PMID: 30180168.
    Citations: 13     Fields:    Translation:HumansCells
  18. Aijaz A, Li M, Smith D, Khong D, LeBlon C, Fenton OS, Olabisi RM, Libutti S, Tischfield J, Maus MV, Deans R, Barcia RN, Anderson DG, Ritz J, Preti R, Parekkadan B. Biomanufacturing for clinically advanced cell therapies. Nat Biomed Eng. 2018 06; 2(6):362-376. PMID: 31011198.
    Citations: 22     Fields:    Translation:Humans
  19. Miller BLK, Garg P, Bronstein B, LaPointe E, Lin H, Charytan DM, Tilles AW, Parekkadan B. Extracorporeal Stromal Cell Therapy for Subjects With Dialysis-Dependent Acute Kidney Injury. Kidney Int Rep. 2018 Sep; 3(5):1119-1127. PMID: 30197978.
    Citations: 3     
  20. Li M, Khong D, Chin LY, Singleton A, Parekkadan B. Therapeutic Delivery Specifications Identified Through Compartmental Analysis of a Mesenchymal Stromal Cell-Immune Reaction. Sci Rep. 2018 05 01; 8(1):6816. PMID: 29717209.
    Citations: 3     Fields:    Translation:HumansCells
  21. Khong D, Li M, Singleton A, Chin LY, Parekkadan B. Stromalized microreactor supports murine hematopoietic progenitor enrichment. Biomed Microdevices. 2018 01 20; 20(1):13. PMID: 29353324.
    Citations:    Fields:    Translation:AnimalsCells
  22. Mukundan S, Guan D, Singleton A, Yang Y, Li M, Parekkadan B. Artificial T Cell Mimetics to Combat Melanoma Tumor Growth. Am J Adv Drug Deliv. 2018; 6(1):21-32. PMID: 30197907.
    Citations:    
  23. Mukundan S, Sharma K, Honselmann K, Singleton A, Liss A, Parekkadan B. Image-Based Profiling of Patient-Derived Pancreatic Tumor-Stromal Cell Interactions Within a Micropatterned Tumor Model. Technol Cancer Res Treat. 2018 01 01; 17:1533033818803632. PMID: 30348057.
    Citations:    Fields:    Translation:HumansCells
  24. Khong D, Li M, Singleton A, Chin LY, Mukundan S, Parekkadan B. Orthogonal potency analysis of mesenchymal stromal cell function during ex vivo expansion. Exp Cell Res. 2018 01 01; 362(1):102-110. PMID: 29137914.
    Citations: 4     Fields:    Translation:HumansCells
  25. Singleton A, Khong D, Chin LY, Mukundan S, Li M, Parekkadan B. An engineered biomarker system to monitor and modulate immune clearance of cell therapies. Cytotherapy. 2017 12; 19(12):1537-1545. PMID: 28917628.
    Citations: 2     Fields:    Translation:HumansAnimalsCells
  26. Tosi L, Sridhara V, Yang Y, Guan D, Shpilker P, Segata N, Larman HB, Parekkadan B. Long-adapter single-strand oligonucleotide probes for the massively multiplexed cloning of kilobase genome regions. Nat Biomed Eng. 2017; 1. PMID: 29152409.
    Citations: 2     Fields:    
  27. Lee J, Heckl D, Parekkadan B. Multiple genetically engineered humanized microenvironments in a single mouse. Biomater Res. 2016; 20:19. PMID: 27354920.
    Citations: 6     
  28. Shen K, Luk S, Elman J, Murray R, Mukundan S, Parekkadan B. Suicide Gene-Engineered Stromal Cells Reveal a Dynamic Regulation of Cancer Metastasis. Sci Rep. 2016 Feb 19; 6:21239. PMID: 26893143.
    Citations: 6     Fields:    Translation:HumansAnimalsCells
  29. Lee J, Kohl N, Shanbhang S, Parekkadan B. Scaffold-integrated microchips for end-to-end in vitro tumor cell attachment and xenograft formation. Technology (Singap World Sci). 2015 Dec; 3(4):179-188. PMID: 26709385.
    Citations: 3     
  30. Shen K, Luk S, Hicks DF, Elman JS, Bohr S, Iwamoto Y, Murray R, Pena K, Wang F, Seker E, Weissleder R, Yarmush ML, Toner M, Sgroi D, Parekkadan B. Resolving cancer-stroma interfacial signalling and interventions with micropatterned tumour-stromal assays. Nat Commun. 2014 Dec 09; 5:5662. PMID: 25489927.
    Citations: 16     Fields:    Translation:HumansAnimalsCells
  31. Bersani F, Lee J, Yu M, Morris R, Desai R, Ramaswamy S, Toner M, Haber DA, Parekkadan B. Bioengineered implantable scaffolds as a tool to study stromal-derived factors in metastatic cancer models. Cancer Res. 2014 Dec 15; 74(24):7229-38. PMID: 25339351.
    Citations: 28     Fields:    Translation:HumansAnimalsCells
  32. Fletcher AL, Elman JS, Astarita J, Murray R, Saeidi N, D'Rozario J, Knoblich K, Brown FD, Schildberg FA, Nieves JM, Heng TS, Boyd RL, Turley SJ, Parekkadan B. Lymph node fibroblastic reticular cell transplants show robust therapeutic efficacy in high-mortality murine sepsis. Sci Transl Med. 2014 Aug 13; 6(249):249ra109. PMID: 25122637.
    Citations: 13     Fields:    Translation:AnimalsCells
  33. Shen K, Lee J, Yarmush ML, Parekkadan B. Microcavity substrates casted from self-assembled microsphere monolayers for spheroid cell culture. Biomed Microdevices. 2014 Aug; 16(4):609-15. PMID: 24781882.
    Citations: 3     Fields:    Translation:HumansCells
  34. Patel SJ, Milwid JM, King KR, Bohr S, Iracheta-Velle A, Li M, Vitalo A, Parekkadan B, Jindal R, Yarmush ML. Erratum: Gap junction inhibition prevents drug-induced liver toxicity and fulminant hepatic failure. Nat Biotechnol. 2014 Mar 10; 32(3):291. PMID: 24727782.
    Citations:    
  35. Elman JS, Murray RC, Murray RM, Wang F, Shen K, Gao S, Conway KE, Yarmush ML, Tannous BA, Weissleder R, Parekkadan B. Pharmacokinetics of natural and engineered secreted factors delivered by mesenchymal stromal cells. PLoS One. 2014; 9(2):e89882. PMID: 24587097.
    Citations: 13     Fields:    Translation:HumansAnimalsCells
  36. Milwid JM, Elman JS, Li M, Shen K, Manrai A, Gabow A, Yarmush J, Jiao Y, Fletcher A, Lee J, Cima MJ, Yarmush ML, Parekkadan B. Enriched protein screening of human bone marrow mesenchymal stromal cell secretions reveals MFAP5 and PENK as novel IL-10 modulators. Mol Ther. 2014 May; 22(5):999-1007. PMID: 24496384.
    Citations: 16     Fields:    Translation:HumansAnimalsCells
  37. Elman JS, Li M, Wang F, Gimble JM, Parekkadan B. A comparison of adipose and bone marrow-derived mesenchymal stromal cell secreted factors in the treatment of systemic inflammation. J Inflamm (Lond). 2014 Jan 07; 11(1):1. PMID: 24397734.
    Citations: 37     
  38. Lee J, Wang JB, Bersani F, Parekkadan B. Capture and printing of fixed stromal cell membranes for bioactive display on PDMS surfaces. Langmuir. 2013 Aug 27; 29(34):10611-6. PMID: 23927769.
    Citations: 4     Fields:    Translation:HumansCells
  39. Milwid JM, Ichimura T, Li M, Jiao Y, Lee J, Yarmush JS, Parekkadan B, Tilles AW, Bonventre JV, Yarmush ML. Secreted factors from bone marrow stromal cells upregulate IL-10 and reverse acute kidney injury. Stem Cells Int. 2012; 2012:392050. PMID: 23319959.
    Citations: 12     
  40. Lee J, Li M, Milwid J, Dunham J, Vinegoni C, Gorbatov R, Iwamoto Y, Wang F, Shen K, Hatfield K, Enger M, Shafiee S, McCormack E, Ebert BL, Weissleder R, Yarmush ML, Parekkadan B. Implantable microenvironments to attract hematopoietic stem/cancer cells. Proc Natl Acad Sci U S A. 2012 Nov 27; 109(48):19638-43. PMID: 23150542.
    Citations: 43     Fields:    Translation:HumansAnimalsCells
  41. Patel SJ, Milwid JM, King KR, Bohr S, Iracheta-Vellve A, Iracheta-Velle A, Li M, Vitalo A, Parekkadan B, Jindal R, Yarmush ML. Gap junction inhibition prevents drug-induced liver toxicity and fulminant hepatic failure. Nat Biotechnol. 2012 Jan 15; 30(2):179-83. PMID: 22252509.
    Citations: 46     Fields:    Translation:HumansAnimalsCells
  42. Parekkadan B, Fletcher AL, Li M, Tjota MY, Bellemare-Pelletier A, Milwid JM, Lee JW, Yarmush ML, Turley SJ. Aire controls mesenchymal stem cell-mediated suppression in chronic colitis. Mol Ther. 2012 Jan; 20(1):178-86. PMID: 21952165.
    Citations: 10     Fields:    Translation:HumansAnimalsCells
  43. Li M, Tilles AW, Milwid JM, Hammad M, Lee J, Yarmush ML, Parekkadan B. Phenotypic and functional characterization of human bone marrow stromal cells in hollow-fibre bioreactors. J Tissue Eng Regen Med. 2012 May; 6(5):369-77. PMID: 21710576.
    Citations: 5     Fields:    Translation:HumansCells
  44. Jiao J, Milwid JM, Yarmush ML, Parekkadan B. A mesenchymal stem cell potency assay. Methods Mol Biol. 2011; 677:221-31. PMID: 20941614.
    Citations: 8     Fields:    Translation:HumansCells
  45. Parekkadan B, Upadhyay R, Dunham J, Iwamoto Y, Mizoguchi E, Mizoguchi A, Weissleder R, Yarmush ML. Bone marrow stromal cell transplants prevent experimental enterocolitis and require host CD11b+ splenocytes. Gastroenterology. 2011 Mar; 140(3):966-75. PMID: 20955701.
    Citations: 32     Fields:    Translation:AnimalsCells
  46. Parekkadan B, Milwid JM. Mesenchymal stem cells as therapeutics. Annu Rev Biomed Eng. 2010 Aug 15; 12:87-117. PMID: 20415588.
    Citations: 257     Fields:    Translation:HumansAnimalsCells
  47. Yagi H, Soto-Gutierrez A, Navarro-Alvarez N, Nahmias Y, Goldwasser Y, Kitagawa Y, Tilles AW, Tompkins RG, Parekkadan B, Yarmush ML. Reactive bone marrow stromal cells attenuate systemic inflammation via sTNFR1. Mol Ther. 2010 Oct; 18(10):1857-64. PMID: 20664529.
    Citations: 72     Fields:    Translation:HumansAnimalsCells
  48. Yagi H, Soto-Gutierrez A, Parekkadan B, Kitagawa Y, Tompkins RG, Kobayashi N, Yarmush ML. Mesenchymal stem cells: Mechanisms of immunomodulation and homing. Cell Transplant. 2010; 19(6):667-79. PMID: 20525442.
    Citations: 204     Fields:    Translation:HumansAnimalsCells
  49. Yagi H, Parekkadan B, Suganuma K, Soto-Gutierrez A, Tompkins RG, Tilles AW, Yarmush ML. Long-term superior performance of a stem cell/hepatocyte device for the treatment of acute liver failure. Tissue Eng Part A. 2009 Nov; 15(11):3377-88. PMID: 19397469.
    Citations: 24     Fields:    Translation:AnimalsCells
  50. van Poll D, Parekkadan B, Cho CH, Berthiaume F, Nahmias Y, Tilles AW, Yarmush ML. Mesenchymal stem cell-derived molecules directly modulate hepatocellular death and regeneration in vitro and in vivo. Hepatology. 2008 May; 47(5):1634-43. PMID: 18395843.
    Citations: 193     Fields:    Translation:HumansAnimalsCells
  51. Parekkadan B, Tilles AW, Yarmush ML. Bone marrow-derived mesenchymal stem cells ameliorate autoimmune enteropathy independently of regulatory T cells. Stem Cells. 2008 Jul; 26(7):1913-9. PMID: 18420833.
    Citations: 58     Fields:    Translation:AnimalsCells
  52. Parekkadan B, Berdichevsky Y, Irimia D, Leeder A, Yarmush G, Toner M, Levine JB, Yarmush ML. Cell-cell interaction modulates neuroectodermal specification of embryonic stem cells. Neurosci Lett. 2008 Jun 20; 438(2):190-5. PMID: 18467031.
    Citations: 20     Fields:    Translation:AnimalsCells
  53. Levine JB, Leeder AD, Parekkadan B, Berdichevsky Y, Rauch SL, Smoller JW, Konradi C, Berthiaume F, Yarmush ML. Isolation rearing impairs wound healing and is associated with increased locomotion and decreased immediate early gene expression in the medial prefrontal cortex of juvenile rats. Neuroscience. 2008 Jan 24; 151(2):589-603. PMID: 18063315.
    Citations: 10     Fields:    Translation:Animals
  54. Parekkadan B, Sethu P, van Poll D, Yarmush ML, Toner M. Osmotic selection of human mesenchymal stem/progenitor cells from umbilical cord blood. Tissue Eng. 2007 Oct; 13(10):2465-73. PMID: 17665999.
    Citations: 8     Fields:    Translation:HumansCells
  55. Parekkadan B, van Poll D, Suganuma K, Carter EA, Berthiaume F, Tilles AW, Yarmush ML. Mesenchymal stem cell-derived molecules reverse fulminant hepatic failure. PLoS One. 2007 Sep 26; 2(9):e941. PMID: 17895982.
    Citations: 197     Fields:    Translation:HumansAnimalsCells
  56. Parekkadan B, van Poll D, Megeed Z, Kobayashi N, Tilles AW, Berthiaume F, Yarmush ML. Immunomodulation of activated hepatic stellate cells by mesenchymal stem cells. Biochem Biophys Res Commun. 2007 Nov 16; 363(2):247-52. PMID: 17869217.
    Citations: 72     Fields:    Translation:HumansAnimalsCells
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Funded by the NIH National Center for Advancing Translational Sciences through its Clinical and Translational Science Awards Program, grant number UL1TR002541.