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Khashayar Vakili, M.D.


Transcriptome analysis of pediatric hepatocellular carcinoma
Summer, 06/08/15 - 08/14/15

Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
  1. Aktas RG, Karski M, Issac B, Sun L, Rockowitz S, Sliz P, Vakili K. Long-Term Characteristics of Human-Derived Biliary Organoids under a Single Continuous Culture Condition. Cells. 2022 Nov 27; 11(23). PMID: 36497057; PMCID: PMC9741396.
    Citations:    Fields:    Translation:HumansCells
  2. Francisco AB, Kanke M, Massa AP, Dinh TA, Sritharan R, Vakili K, Bardeesy N, Sethupathy P. Multiomic analysis of microRNA-mediated regulation reveals a proliferative axis involving miR-10b in fibrolamellar carcinoma. JCI Insight. 2022 06 08; 7(11). PMID: 35482409; PMCID: PMC9220943.
    Citations:    Fields:    Translation:HumansAnimals
  3. Valencia E, Vakili K, Thiagarajan RR, Mullen MP, Fynn-Thompson F, Weldon CB, Duvall MG. Case 2-2022: An Adolescent Male in Cardiac Arrest 3 Days After Liver Transplantation for End-Stage Liver Disease. Pediatr Crit Care Med. 2022 09 01; 23(9):e440-e450. PMID: 35969659; PMCID: PMC9426743.
    Citations:    Fields:    Translation:Humans
  4. Ott L, Vakili K, Cuenca AG. Organ allocation in pediatric abdominal transplant. Semin Pediatr Surg. 2022 Jun; 31(3):151180. PMID: 35725055; PMCID: PMC9333194.
    Citations:    Fields:    Translation:Humans
  5. Kim SS, Kycia I, Karski M, Ma RK, Bordt EA, Kwan J, Karki A, Winter E, Aktas RG, Wu Y, Emili A, Bauer DE, Sethupathy P, Vakili K. DNAJB1-PRKACA in HEK293T cells induces LINC00473 overexpression that depends on PKA signaling. PLoS One. 2022; 17(2):e0263829. PMID: 35167623; PMCID: PMC8846505.
    Citations: 1     Fields:    Translation:HumansCells
  6. Petrozziello T, Bordt EA, Mills AN, Kim SE, Sapp E, Devlin BA, Obeng-Marnu AA, Farhan SMK, Amaral AC, Dujardin S, Dooley PM, Henstridge C, Oakley DH, Neueder A, Hyman BT, Spires-Jones TL, Bilbo SD, Vakili K, Cudkowicz ME, Berry JD, DiFiglia M, Silva MC, Haggarty SJ, Sadri-Vakili G. Targeting Tau Mitigates Mitochondrial Fragmentation and Oxidative Stress in Amyotrophic Lateral Sclerosis. Mol Neurobiol. 2022 Jan; 59(1):683-702. PMID: 34757590.
    Citations: 2     Fields:    Translation:HumansCells
  7. Durgin JM, Slatnick BL, Vakili K, Kim HB, Cuenca AG. Midaortic syndrome and renovascular hypertension. Semin Pediatr Surg. 2021 Dec; 30(6):151124. PMID: 34930586.
    Citations:    Fields:    Translation:Humans
  8. O'Neill AF, Church AJ, Perez-Atayde AR, Shaikh R, Marcus KJ, Vakili K. Fibrolamellar carcinoma: An entity all its own. Curr Probl Cancer. 2021 08; 45(4):100770. PMID: 34272087.
    Citations: 2     Fields:    Translation:Humans
  9. Kim SS, Stein DR, Ferguson MA, Porras D, Chaudry G, Singh MN, Smoot L, Kim HB, Vakili K. Surgical management of pediatric renovascular hypertension and midaortic syndrome at a single-center multidisciplinary program. J Vasc Surg. 2021 07; 74(1):79-89.e2. PMID: 33340698.
    Citations: 1     Fields:    Translation:Humans
  10. Lee CK, Nastasio S, Mitchell PD, Fawaz R, Elisofon SA, Vakili K, Kim HB, Nguyen D, Jonas MM. Transient elastography assessment of liver allograft fibrosis in pediatric transplant recipients. Pediatr Transplant. 2020 09; 24(6):e13736. PMID: 32432836.
    Citations: 2     Fields:    Translation:Humans
  11. Kim SS, Ramos-Gonzalez G, Staffa SJ, Labib Z, Kim HB, Vakili K. Donor-to-recipient weight ratio is a risk factor for hepatic artery thrombosis after whole-liver transplantation in children under 25 kg. Pediatr Transplant. 2020 03; 24(2):e13623. PMID: 31828929.
    Citations:    Fields:    Translation:Humans
  12. Lee E, Ramos-Gonzalez G, Staffa SJ, Rodig N, Vakili K, Kim HB. Perioperative renal transplantation management in small children using adult-sized living or deceased donor kidneys: A single-center experience. Pediatr Transplant. 2019 11; 23(7):e13553. PMID: 31328864.
    Citations:    Fields:    Translation:Humans
  13. Karki A, Putra J, Kim SS, Laquaglia MJ, Perez-Atayde AR, Sadri-Vakili G, Vakili K. MDM4 expression in fibrolamellar hepatocellular carcinoma. Oncol Rep. 2019 Oct; 42(4):1487-1496. PMID: 31322272.
    Citations: 3     Fields:    Translation:Humans
  14. Ocwieja KE, Vargas SO, Elisofon SA, Shulman DS, Lee CK, Fawaz R, Collins N, Vakili K, Sharma TS. Pediatric post-transplant hepatic kaposi sarcoma due to donor-derived human herpesvirus 8. Pediatr Transplant. 2019 05; 23(3):e13384. PMID: 30843320.
    Citations: 2     Fields:    Translation:HumansCells
  15. Mann N, Braun DA, Amann K, Tan W, Shril S, Connaughton DM, Nakayama M, Schneider R, Kitzler TM, van der Ven AT, Chen J, Ityel H, Vivante A, Majmundar AJ, Daga A, Warejko JK, Lovric S, Ashraf S, Jobst-Schwan T, Widmeier E, Hugo H, Mane SM, Spaneas L, Somers MJG, Ferguson MA, Traum AZ, Stein DR, Baum MA, Daouk GH, Lifton RP, Manzi S, Vakili K, Kim HB, Rodig NM, Hildebrandt F. Whole-Exome Sequencing Enables a Precision Medicine Approach for Kidney Transplant Recipients. J Am Soc Nephrol. 2019 02; 30(2):201-215. PMID: 30655312; PMCID: PMC6362619.
    Citations: 31     Fields:    Translation:Humans
  16. Mueller KA, Glajch KE, Huizenga MN, Wilson RA, Granucci EJ, Dios AM, Tousley AR, Iuliano M, Weisman E, LaQuaglia MJ, DiFiglia M, Kegel-Gleason K, Vakili K, Sadri-Vakili G. Hippo Signaling Pathway Dysregulation in Human Huntington's Disease Brain and Neuronal Stem Cells. Sci Rep. 2018 07 27; 8(1):11355. PMID: 30054496; PMCID: PMC6063913.
    Citations: 23     Fields:    Translation:HumansAnimalsCells
  17. Ramos-Gonzalez G, LaQuaglia M, O'Neill AF, Elisofon S, Zurakowski D, Kim HB, Vakili K. Long-term outcomes of liver transplantation for hepatoblastoma: A single-center 14-year experience. Pediatr Transplant. 2018 Jun 11; e13250. PMID: 29888545.
    Citations: 7     Fields:    
  18. Kim HB, Lee EJ, Vakili K, Stein DR, Ferguson MA, Porras D, Lock JE, Fynn-Thompson F, Fishman SJ. Mesenteric Artery Growth Improves Circulation (MAGIC) in Midaortic Syndrome. Ann Surg. 2018 06; 267(6):e109-e111. PMID: 28991869.
    Citations: 1     Fields:    Translation:Humans
  19. Warejko JK, Schueler M, Vivante A, Tan W, Daga A, Lawson JA, Braun DA, Shril S, Amann K, Somers MJG, Rodig NM, Baum MA, Daouk G, Traum AZ, Kim HB, Vakili K, Porras D, Lock J, Rivkin MJ, Chaudry G, Smoot LB, Singh MN, Smith ER, Mane SM, Lifton RP, Stein DR, Ferguson MA, Ferguson MA, Hildebrandt F. Whole Exome Sequencing Reveals a Monogenic Cause of Disease in ˜43% of 35 Families With Midaortic Syndrome. Hypertension. 2018 04; 71(4):691-699. PMID: 29483232.
    Citations: 3     Fields:    Translation:Humans
  20. Kim HB, Vakili K. To Split or Not to Split? That is No Longer the Question. J Pediatr. 2018 05; 196:12-13. PMID: 29395183.
    Citations: 2     Fields:    Translation:Humans
  21. Kim HB, Vakili K, Ramos-Gonzalez GJ, Stein DR, Ferguson MA, Ferguson MA, Porras D, Lock JE, Chaudry G, Alomari A, Fishman SJ. Tissue expander-stimulated lengthening of arteries for the treatment of midaortic syndrome in children. J Vasc Surg. 2018 06; 67(6):1664-1672. PMID: 29342430.
    Citations: 2     Fields:    Translation:Humans
  22. Lee E, Ramos-Gonzalez G, Rodig N, Elisofon S, Vakili K, Kim HB. Bilateral native nephrectomy to reduce oxalate stores in children at the time of combined liver-kidney transplantation for primary hyperoxaluria type 1. Pediatr Nephrol. 2018 05; 33(5):881-887. PMID: 29243158.
    Citations: 2     Fields:    Translation:Humans
  23. Cuenca AG, Kim HB, Vakili K. Pediatric liver transplantation. Semin Pediatr Surg. 2017 Aug; 26(4):217-223. PMID: 28964477.
    Citations: 13     Fields:    Translation:Humans
  24. Kloesel B, Kovatsis PG, Faraoni D, Young V, Kim HB, Vakili K, Goobie SM. Incidence and predictors of massive bleeding in children undergoing liver transplantation: A single-center retrospective analysis. Paediatr Anaesth. 2017 Jul; 27(7):718-725. PMID: 28557286.
    Citations: 2     Fields:    Translation:Humans
  25. Lee E, Hodgkinson N, Fawaz R, Vakili K, Kim HB. Multivisceral transplantation for abdominal tumors in children: A single center experience and review of the literature. Pediatr Transplant. 2017 Aug; 21(5). PMID: 28393434.
    Citations: 1     Fields:    Translation:Humans
  26. Sulemanji M, Vakili K, Zurakowski D, Tworetzky W, Fishman SJ, Kim HB. Umbilical Venous Catheter Malposition Is Associated with Necrotizing Enterocolitis in Premature Infants. Neonatology. 2017; 111(4):337-343. PMID: 28092913.
    Citations: 8     Fields:    Translation:Humans
  27. Minneman JA, Grijalva JL, LaQuaglia MJ, Kim HB, Rangel SJ, Vakili K. Variation in resource utilization in liver transplantation at freestanding children's hospitals. Pediatr Transplant. 2016 Nov; 20(7):921-925. PMID: 27762480.
    Citations: 2     Fields:    Translation:Humans
  28. LaQuaglia MJ, Grijalva JL, Mueller KA, Perez-Atayde AR, Kim HB, Sadri-Vakili G, Vakili K. YAP Subcellular Localization and Hippo Pathway Transcriptome Analysis in Pediatric Hepatocellular Carcinoma. Sci Rep. 2016 09 08; 6:30238. PMID: 27605415; PMCID: PMC5015017.
    Citations: 25     Fields:    Translation:HumansCells
  29. Valentino PL, Jonas MM, Lee CK, Kim HB, Vakili K, Elisofon SA. Outcomes after discontinuation of routine use of transanastomotic biliary stents in pediatric liver transplantation at a single site. Pediatr Transplant. 2016 Aug; 20(5):647-51. PMID: 27239056.
    Citations:    Fields:    Translation:Humans
  30. Fullington NM, Potanos KM, Cauley RP, Purcell P, Zurakowski D, Fishman SJ, Vakili K, Kim HB. Strain induced esophageal growth in a novel rodent model. J Pediatr Surg. 2016 Aug; 51(8):1273-8. PMID: 26976775.
    Citations:    Fields:    Translation:Animals
  31. Potanos K, Fullington N, Cauley R, Purcell P, Zurakowski D, Fishman S, Vakili K, Kim HB. Tissue expander stimulated lengthening of arteries (TESLA) induces early endothelial cell proliferation in a novel rodent model. J Pediatr Surg. 2016 Apr; 51(4):617-21. PMID: 26463500.
    Citations:    Fields:    Translation:HumansAnimalsCells
  32. Cauley RP, Potanos K, Fullington N, Grijalva J, Graham DA, Kim HB, Vakili K. The effect of graft type on mortality in liver transplantation for hepatocellular carcinoma. Ann Transplant. 2015 Mar 30; 20:175-85. PMID: 25819218.
    Citations: 1     Fields:    Translation:Humans
  33. Fullington NM, Cauley RP, Potanos KM, O'Melia L, Zurakowski D, Bae Kim H, Seefelder C, Vakili K. Immediate extubation after pediatric liver transplantation: a single-center experience. Liver Transpl. 2015 Jan; 21(1):57-62. PMID: 25368908.
    Citations: 2     Fields:    Translation:Humans
  34. Grijalva JL, Huizenga M, Mueller K, Rodriguez S, Brazzo J, Camargo F, Sadri-Vakili G, Vakili K. Dynamic alterations in Hippo signaling pathway and YAP activation during liver regeneration. Am J Physiol Gastrointest Liver Physiol. 2014 Jul 15; 307(2):G196-204. PMID: 24875096.
    Citations: 63     Fields:    Translation:AnimalsCells
  35. Vakili K, Kim HB. Partial esophageal transplantation is possible as part of a multivisceral graft. Am J Transplant. 2014 Mar; 14(3):720-3. PMID: 24447794.
    Citations: 3     Fields:    Translation:Humans
  36. Sulemanji M, Vakili K. Neonatal renal physiology. Semin Pediatr Surg. 2013 Nov; 22(4):195-8. PMID: 24331094.
    Citations: 15     Fields:    Translation:Humans
  37. Grijalva J, Vakili K. Neonatal liver physiology. Semin Pediatr Surg. 2013 Nov; 22(4):185-9. PMID: 24331092.
    Citations: 39     Fields:    Translation:Humans
  38. Cauley RP, Vakili K, Fullington N, Potanos K, Graham DA, Finkelstein JA, Kim HB. Deceased-donor split-liver transplantation in adult recipients: is the learning curve over? J Am Coll Surg. 2013 Oct; 217(4):672-684.e1. PMID: 23978530; PMCID: PMC4876853.
    Citations: 13     Fields:    Translation:Humans
  39. Cauley RP, Vakili K, Potanos K, Fullington N, Graham DA, Finkelstein JA, Kim HB. Deceased donor liver transplantation in infants and small children: are partial grafts riskier than whole organs? Liver Transpl. 2013 Jul; 19(7):721-9. PMID: 23696310.
    Citations: 10     Fields:    Translation:Humans
  40. Bairdain S, Modi BP, Kim HB, Mooney DP, Durkin E, Vakili K. Pediatric blunt abdominal aortic injury and the use of intra-operative aortic ultrasound for surgical decision making. J Pediatr Surg. 2013 Jul; 48(7):1584-7. PMID: 23895976.
    Citations:    Fields:    Translation:Humans
  41. Porras D, Stein DR, Ferguson MA, Chaudry G, Alomari A, Vakili K, Fishman SJ, Lock JE, Kim HB. Midaortic syndrome: 30 years of experience with medical, endovascular and surgical management. Pediatr Nephrol. 2013 Oct; 28(10):2023-33. PMID: 23775038.
    Citations: 21     Fields:    Translation:Humans
  42. Cauley RP, Potanos K, Fullington N, Lillehei C, Vakili K, Kim HB. Reno-portal anastomosis as an approach to pediatric kidney transplantation in the setting of inferior vena cava thrombosis. Pediatr Transplant. 2013 May; 17(3):E88-92. PMID: 23461835.
    Citations: 2     Fields:    Translation:Humans
  43. Vakili K, Fullington NM, Turner CG, Cauley RP, Potanos KM, Lee S, Ferguson M, Lock JE, Kim HB. Aorto-mesenteric and renal allograft transplant: a novel treatment for midaortic syndrome. Am J Transplant. 2013 Apr; 13(4):1088-1092. PMID: 23433449.
    Citations:    Fields:    Translation:Humans
  44. Kim HB, Vakili K, Modi BP, Ferguson MA, Guillot AP, Potanos KM, Prabhu SP, Fishman SJ. A novel treatment for the midaortic syndrome. N Engl J Med. 2012 Dec 13; 367(24):2361-2. PMID: 23234530.
    Citations: 4     Fields:    Translation:Humans
  45. Cauley RP, Suh MY, Kamin DS, Lillehei CW, Jenkins RL, Jonas MM, Vakili K, Kim HB. Multivisceral transplantation using a 2.9 kg neonatal donor. Pediatr Transplant. 2012 Dec; 16(8):E379-82. PMID: 22694210.
    Citations:    Fields:    Translation:Humans
  46. Vakili K, Pomposelli JJ, Cheah YL, Akoad M, Lewis WD, Khettry U, Gordon F, Khwaja K, Jenkins R, Pomfret EA. Living donor liver transplantation for hepatocellular carcinoma: Increased recurrence but improved survival. Liver Transpl. 2009 Dec; 15(12):1861-6. PMID: 19938113.
    Citations: 32     Fields:    Translation:Humans
  47. Vakili K, Pomfret EA. Biliary anatomy and embryology. Surg Clin North Am. 2008 Dec; 88(6):1159-74, vii. PMID: 18992589.
    Citations: 11     Fields:    Translation:Humans
  48. Moulton KS, Vakili K, Zurakowski D, Soliman M, Butterfield C, Sylvin E, Lo KM, Gillies S, Javaherian K, Folkman J. Inhibition of plaque neovascularization reduces macrophage accumulation and progression of advanced atherosclerosis. Proc Natl Acad Sci U S A. 2003 Apr 15; 100(8):4736-41. PMID: 12682294; PMCID: PMC153625.
    Citations: 191     Fields:    Translation:AnimalsCells
  49. Steingard RJ, Yurgelun-Todd DA, Hennen J, Moore JC, Moore CM, Vakili K, Young AD, Katic A, Beardslee WR, Renshaw PF. Increased orbitofrontal cortex levels of choline in depressed adolescents as detected by in vivo proton magnetic resonance spectroscopy. Biol Psychiatry. 2000 Dec 01; 48(11):1053-61. PMID: 11094138.
    Citations: 35     Fields:    Translation:HumansCells
  50. Vakili K, Pillay SS, Lafer B, Fava M, Renshaw PF, Bonello-Cintron CM, Yurgelun-Todd DA. Hippocampal volume in primary unipolar major depression: a magnetic resonance imaging study. Biol Psychiatry. 2000 Jun 15; 47(12):1087-90. PMID: 10862809.
    Citations: 93     Fields:    Translation:HumansCTClinical Trials
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Funded by the NIH National Center for Advancing Translational Sciences through its Clinical and Translational Science Awards Program, grant number UL1TR002541.