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Raymond Y Huang, Ph.D., M.D.

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Mentoring
Available: 08/01/17, Expires: 06/29/19

The goal of this project is to identify and validate predictive and prognostic imaging biomarkers for adult brain tumor. We are actively exploring advanced imaging techniques including MR diffusion imaging, perfusion imaging, and Magnetic Resonance spectroscopy, for better prediction of treatment response and patient outcome. An HMS student will be closely supervised by Dr. Huang in applying analytic methods including tumor volumetric segmentation, imaging feature extraction, machine learning algorithms. Through close collaborations between Radiology, Neurology and Oncology at the Dana Farber/Brigham and Women’s Cancer Center, this project will allow the participating student to develop clinical and translational research skills for a career goal as a physician-scientist in the field of Neuro-Oncology.


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Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
  1. Bi WL, Hosny A, Schabath MB, Giger ML, Birkbak NJ, Mehrtash A, Allison T, Arnaout O, Abbosh C, Dunn IF, Mak RH, Tamimi RM, Tempany CM, Swanton C, Hoffmann U, Schwartz LH, Gillies RJ, Huang RY, Aerts HJWL. Artificial intelligence in cancer imaging: Clinical challenges and applications. CA Cancer J Clin. 2019 Mar; 69(2):127-157. PMID: 30720861.
    Citations:    
  2. Yanagihara TK, McFaline-Figueroa JR, Giacalone NJ, Lee AW, Soni V, Hwang ME, Hsieh KT, Saraf A, Wu CC, Yang D, Wen PY, Ashamalla H, Aizer AA, Wang TJC, Huang RY. A Low Percentage of Metastases in Deep Brain and Temporal Lobe Structures. Neuro Oncol. 2019 Jan 23. PMID: 30715520.
    Citations:    
  3. Zhou H, Chang K, Bai HX, Xiao B, Su C, Bi WL, Zhang PJ, Senders JT, Vallières M, Kavouridis VK, Boaro A, Arnaout O, Yang L, Huang RY. Machine learning reveals multimodal MRI patterns predictive of isocitrate dehydrogenase and 1p/19q status in diffuse low- and high-grade gliomas. J Neurooncol. 2019 Jan 19. PMID: 30661193.
    Citations:    Fields:    
  4. Unadkat P, Fumagalli L, Rigolo L, Vangel MG, Young GS, Huang R, Mukundan S, Golby A, Tie Y. Functional MRI Task Comparison for Language Mapping in Neurosurgical Patients. J Neuroimaging. 2019 Jan 16. PMID: 30648771.
    Citations:    Fields:    
  5. Huang RY, Bi WL, Griffith B, Kaufmann TJ, la Fougère C, Schmidt NO, Tonn JC, Vogelbaum MA, Wen PY, Aldape K, Nassiri F, Zadeh G, Dunn IF. Imaging and diagnostic advances for intracranial meningiomas. Neuro Oncol. 2019 Jan 14; 21(Supplement_1):i44-i61. PMID: 30649491.
    Citations:    Fields:    
  6. Huang RY, Bi WL, Weller M, Kaley T, Blakeley J, Dunn I, Galanis E, Preusser M, McDermott M, Rogers L, Raizer J, Schiff D, Soffietti R, Tonn JC, Vogelbaum M, Weber D, Reardon DA, Wen PY. Proposed response assessment and endpoints for meningioma clinical trials: report from the Response Assessment in Neuro-Oncology Working Group. Neuro Oncol. 2019 Jan 01; 21(1):26-36. PMID: 30137421.
    Citations:    Fields:    
  7. Ismail M, Hill V, Statsevych V, Huang R, Prasanna P, Correa R, Singh G, Bera K, Beig N, Thawani R, Madabhushi A, Aahluwalia M, Tiwari P. Shape Features of the Lesion Habitat to Differentiate Brain Tumor Progression from Pseudoprogression on Routine Multiparametric MRI: A Multisite Study. AJNR Am J Neuroradiol. 2018 Dec; 39(12):2187-2193. PMID: 30385468.
    Citations:    Fields:    
  8. George E, Kijewski MF, Dubey S, Belanger AP, Reardon DA, Wen PY, Kesari S, Horky L, Park MA, Huang RY. Voxel-Wise Analysis of Fluoroethyltyrosine PET and MRI in the Assessment of Recurrent Glioblastoma During Antiangiogenic Therapy. AJR Am J Roentgenol. 2018 Dec; 211(6):1342-1347. PMID: 30332289.
    Citations:    Fields:    
  9. Wu J, Kim C, Bai HX, Tang L, Wang Y, Li X, Zhang Z, Karakousis G, Huang R, Zhang PJ, Xiao B, Yang L. Comparison of Radiation Therapy Alone and Chemotherapy Alone for Low-Grade Gliomas without Surgical Resection. World Neurosurg. 2019 Feb; 122:e108-e120. PMID: 30261385.
    Citations:    Fields:    
  10. Guenette JP, Cho CH, Huang RY, Miskin N, Ghazikhanian V, Lee TC. CT-Guided Percutaneous Spine Biopsy Specimen Adequacy, Pathology Concordance, and Negative Predictive Value with Battery-Powered Drill and Manual Approaches. Curr Probl Diagn Radiol. 2018 Sep 04. PMID: 30268583.
    Citations:    Fields:    
  11. Kurz SC, Cabrera LP, Hastie D, Huang R, Unadkat P, Rinne M, Nayak L, Lee EQ, Reardon DA, Wen PY. PD-1 inhibition has only limited clinical benefit in patients with recurrent high-grade glioma. Neurology. 2018 Oct 02; 91(14):e1355-e1359. PMID: 30171077.
    Citations:    Fields:    
  12. Sridharan V, Rahman RM, Huang RY, Chau NG, Lorch JH, Uppaluri R, Haddad RI, Hanna GJ, Schoenfeld JD. Radiologic predictors of immune checkpoint inhibitor response in advanced head and neck squamous cell carcinoma. Oral Oncol. 2018 Oct; 85:29-34. PMID: 30220316.
    Citations:    Fields:    
  13. Glazer DI, DiPiro PJ, Shinagare AB, Huang RY, Wang A, Boland GW, Khorasani R. CT and MRI Protocol Variation and Optimization at an Academic Medical Center. J Am Coll Radiol. 2018 Sep; 15(9):1254-1258. PMID: 30082232.
    Citations:    Fields:    
  14. Huang RY, Unadkat P, Linda Bi W, George E, Preusser M, McCracken DJ, Keen JR, Read WL, Olson JJ, Seystahl K, Le Rhun E, Roelcke U, Koeppen S, Furtner J, Weller M, Raizer JJ, Schiff D, Wen PY. Response Assessment of Meningioma: 1D, 2D and Volumetric Criteria for Treatment Response and Tumor Progression. Neuro Oncol. 2018 Aug 02. PMID: 30085283.
    Citations:    Fields:    
  15. Cagney DN, Sul J, Huang RY, Ligon KL, Wen PY, Alexander BM. The FDA NIH Biomarkers, EndpointS, and other Tools (BEST) resource in neuro-oncology. Neuro Oncol. 2018 Aug 02; 20(9):1162-1172. PMID: 29294069.
    Citations: 1     Fields:    
  16. Zhou M, Zhou Y, Liao H, Rowland BC, Kong X, Arvold ND, Reardon DA, Wen PY, Lin AP, Huang RY. Diagnostic accuracy of 2-hydroxyglutarate magnetic resonance spectroscopy in newly diagnosed brain mass and suspected recurrent gliomas. Neuro Oncol. 2018 Aug 02; 20(9):1262-1271. PMID: 29438510.
    Citations: 2     Fields:    
  17. Ellingson BM, Abrey LE, Nelson SJ, Kaufmann TJ, Garcia J, Chinot O, Saran F, Nishikawa R, Henriksson R, Mason WP, Wick W, Butowski N, Ligon KL, Gerstner ER, Colman H, de Groot J, Chang S, Mellinghoff I, Young RJ, Alexander BM, Colen R, Taylor JW, Arrillaga-Romany I, Mehta A, Huang RY, Pope WB, Reardon D, Batchelor T, Prados M, Galanis E, Wen PY, Cloughesy TF. Validation of postoperative residual contrast-enhancing tumor volume as an independent prognostic factor for overall survival in newly diagnosed glioblastoma. Neuro Oncol. 2018 Aug 02; 20(9):1240-1250. PMID: 29660006.
    Citations: 1     Fields:    
  18. Huang Y, Chan L, Bai HX, Li X, Zhang Z, Wang Y, Cao Y, Karakousis G, Huang R, Xiao B, Zhang PJ, Yang L. Assessment of care pattern and outcome in hemangioblastoma. Sci Rep. 2018 Jul 24; 8(1):11144. PMID: 30042517.
    Citations:    Fields:    
  19. Zou Y, Neale N, Sun J, Yang M, Bai HX, Tang L, Zhang Z, Landi A, Wang Y, Huang RY, Zhang PJ, Li X, Xiao B, Yang L. Prognostic Factors in Clival Chordomas: An Integrated Analysis of 347 Patients. World Neurosurg. 2018 Oct; 118:e375-e387. PMID: 29969746.
    Citations:    Fields:    Translation:Humans
  20. Tang L, Deng L, Bai HX, Sun J, Neale N, Wu J, Wang Y, Chang K, Huang RY, Zhang PJ, Li X, Xiao B, Cao Y, Tao Y, Yang L. Reduced expression of DNA repair genes and chemosensitivity in 1p19q codeleted lower-grade gliomas. J Neurooncol. 2018 Sep; 139(3):563-571. PMID: 29923053.
    Citations:    Fields:    
  21. Nandu H, Wen PY, Huang RY. Imaging in neuro-oncology. Ther Adv Neurol Disord. 2018; 11:1756286418759865. PMID: 29511385.
    Citations:    
  22. Wu J, Neale N, Huang Y, Bai HX, Li X, Zhang Z, Karakousis G, Huang R, Zhang PJ, Tang L, Xiao B, Yang L. Comparison of Adjuvant Radiation Therapy Alone and Chemotherapy Alone in Surgically Resected Low-Grade Gliomas: Survival Analyses of 2253 Cases from the National Cancer Data Base. World Neurosurg. 2018 Apr; 112:e812-e822. PMID: 29409888.
    Citations: 1     Fields:    Translation:Humans
  23. Grossmann P, Narayan V, Chang K, Rahman R, Abrey L, Reardon DA, Schwartz LH, Wen PY, Alexander BM, Huang R, Aerts HJWL. Quantitative imaging biomarkers for risk stratification of patients with recurrent glioblastoma treated with bevacizumab. Neuro Oncol. 2017 Nov 29; 19(12):1688-1697. PMID: 28499022.
    Citations: 4     Fields:    Translation:HumansCTClinical Trials
  24. Chang K, Bai HX, Zhou H, Su C, Bi WL, Agbodza E, Kavouridis VK, Senders JT, Boaro A, Beers A, Zhang B, Capellini A, Liao W, Shen Q, Li X, Xiao B, Cryan J, Ramkissoon S, Ramkissoon L, Ligon K, Wen PY, Bindra RS, Woo J, Arnaout O, Gerstner ER, Zhang PJ, Rosen BR, Yang L, Huang RY, Kalpathy-Cramer J. Residual Convolutional Neural Network for the Determination of IDH Status in Low- and High-Grade Gliomas from MR Imaging. Clin Cancer Res. 2018 Mar 01; 24(5):1073-1081. PMID: 29167275.
    Citations: 5     Fields:    
  25. Coroller TP, Bi WL, Huynh E, Abedalthagafi M, Aizer AA, Greenwald NF, Parmar C, Narayan V, Wu WW, Miranda de Moura S, Gupta S, Beroukhim R, Wen PY, Al-Mefty O, Dunn IF, Santagata S, Alexander BM, Huang RY, Aerts HJWL. Radiographic prediction of meningioma grade by semantic and radiomic features. PLoS One. 2017; 12(11):e0187908. PMID: 29145421.
    Citations: 2     Fields:    Translation:Humans
  26. Mullen KM, Huang RY. An Update on the Approach to the Imaging of Brain Tumors. Curr Neurol Neurosci Rep. 2017 Jul; 17(7):53. PMID: 28516376.
    Citations:    Fields:    Translation:HumansAnimals
  27. Ellingson BM, Gerstner ER, Smits M, Huang RY, Colen R, Abrey LE, Aftab DT, Schwab GM, Hessel C, Harris RJ, Chakhoyan A, Gahrmann R, Pope WB, Leu K, Raymond C, Woodworth DC, de Groot J, Wen PY, Batchelor TT, van den Bent MJ, Cloughesy TF. Diffusion MRI Phenotypes Predict Overall Survival Benefit from Anti-VEGF Monotherapy in Recurrent Glioblastoma: Converging Evidence from Phase II Trials. Clin Cancer Res. 2017 Oct 01; 23(19):5745-5756. PMID: 28655794.
    Citations: 3     Fields:    Translation:HumansCTClinical Trials
  28. Huang R. Response assessment in high-grade glioma: tumor volume as endpoint. Neuro Oncol. 2017 06 01; 19(6):744-745. PMID: 28379518.
    Citations: 1     Fields:    
  29. Huang RY, Wen PY. Response Assessment in Neuro-Oncology Criteria and Clinical Endpoints. Magn Reson Imaging Clin N Am. 2016 Nov; 24(4):705-718. PMID: 27742111.
    Citations: 2     Fields:    Translation:Humans
  30. Zhang B, Chang K, Ramkissoon S, Tanguturi S, Bi WL, Reardon DA, Ligon KL, Alexander BM, Wen PY, Huang RY. Multimodal MRI features predict isocitrate dehydrogenase genotype in high-grade gliomas. Neuro Oncol. 2017 01; 19(1):109-117. PMID: 27353503.
    Citations: 19     Fields:    Translation:Humans
  31. Chang K, Zhang B, Guo X, Zong M, Rahman R, Sanchez D, Winder N, Reardon DA, Zhao B, Wen PY, Huang RY. Multimodal imaging patterns predict survival in recurrent glioblastoma patients treated with bevacizumab. Neuro Oncol. 2016 12; 18(12):1680-1687. PMID: 27257279.
    Citations: 8     Fields:    Translation:Humans
  32. Diamandis P, Ferrer-Luna R, Huang RY, Folkerth RD, Ligon AH, Wen PY, Beroukhim R, Ligon KL, Ramkissoon SH. Case Report: Next generation sequencing identifies a NAB2-STAT6 fusion in Glioblastoma. Diagn Pathol. 2016 Jan 27; 11:13. PMID: 26817999; PMCID: PMC4729030.
    Citations: 1     Fields:    Translation:Humans
  33. Okada H, Weller M, Huang R, Finocchiaro G, Gilbert MR, Wick W, Ellingson BM, Hashimoto N, Pollack IF, Brandes AA, Franceschi E, Herold-Mende C, Nayak L, Panigrahy A, Pope WB, Prins R, Sampson JH, Wen PY, Reardon DA. Immunotherapy response assessment in neuro-oncology: a report of the RANO working group. Lancet Oncol. 2015 Nov; 16(15):e534-e542. PMID: 26545842.
    Citations: 67     Fields:    Translation:Humans
  34. Huang RY, Rahman R, Ballman KV, Felten SJ, Anderson SK, Ellingson BM, Nayak L, Lee EQ, Abrey LE, Galanis E, Reardon DA, Pope WB, Cloughesy TF, Wen PY. The Impact of T2/FLAIR Evaluation per RANO Criteria on Response Assessment of Recurrent Glioblastoma Patients Treated with Bevacizumab. Clin Cancer Res. 2016 Feb 01; 22(3):575-81. PMID: 26490307.
    Citations: 17     Fields:    Translation:Humans
  35. Vaneckova M, Herman M, Smith MP, Mechl M, Maravilla KR, Weichet J, Spampinato MV, Žižka J, Wippold FJ, Baima JJ, Babbel R, Bültmann E, Huang RY, Buhk JH, Bonafé A, Colosimo C, Lui S, Kirchin MA, Shen N, Pirovano G, Spinazzi A. The Benefits of High Relaxivity for Brain Tumor Imaging: Results of a Multicenter Intraindividual Crossover Comparison of Gadobenate Dimeglumine with Gadoterate Meglumine (The BENEFIT Study). AJNR Am J Neuroradiol. 2015 Sep; 36(9):1589-98. PMID: 26185325.
    Citations: 1     Fields:    Translation:Humans
  36. Neagu MR, Huang RY, Reardon DA, Wen PY. How treatment monitoring is influencing treatment decisions in glioblastomas. Curr Treat Options Neurol. 2015 Apr; 17(4):343. PMID: 25749847.
    Citations: 4     
  37. Huang RY, Neagu MR, Reardon DA, Wen PY. Pitfalls in the neuroimaging of glioblastoma in the era of antiangiogenic and immuno/targeted therapy - detecting illusive disease, defining response. Front Neurol. 2015; 6:33. PMID: 25755649.
    Citations: 33     
  38. Lee TC, Chansakul T, Huang RY, Wrubel GL, Mukundan S, Annino DJ, Pribaz JJ, Pomahac B. Early postoperative imaging and image-guided procedures on patients with face transplants. AJNR Am J Neuroradiol. 2015 Mar; 36(3):568-74. PMID: 25339651.
    Citations:    Fields:    Translation:Humans
  39. Rahman R, Hempfling K, Norden AD, Reardon DA, Nayak L, Rinne ML, Beroukhim R, Doherty L, Ruland S, Rai A, Rifenburg J, LaFrankie D, Alexander BM, Huang RY, Wen PY, Lee EQ. Retrospective study of carmustine or lomustine with bevacizumab in recurrent glioblastoma patients who have failed prior bevacizumab. Neuro Oncol. 2014 Nov; 16(11):1523-9. PMID: 24958095; PMCID: PMC4201074.
    Citations: 7     Fields:    Translation:Humans
  40. Rahman R, Hamdan A, Zweifler R, Jiang H, Norden AD, Reardon DA, Mukundan S, Wen PY, Huang RY. Histogram analysis of apparent diffusion coefficient within enhancing and nonenhancing tumor volumes in recurrent glioblastoma patients treated with bevacizumab. J Neurooncol. 2014 Aug; 119(1):149-58. PMID: 24805151.
    Citations: 11     Fields:    Translation:Humans
  41. Chen C, Huang R, MacLean A, Muzikansky A, Mukundan S, Wen PY, Norden AD. Recurrent high-grade glioma treated with bevacizumab: prognostic value of MGMT methylation, EGFR status and pretreatment MRI in determining response and survival. J Neurooncol. 2013 Nov; 115(2):267-76. PMID: 23974656.
    Citations: 10     Fields:    Translation:HumansCells
  42. Abd-El-Barr MM, Saleh E, Huang RY, Golby AJ. Effect of disease and recovery on functional anatomy in brain tumor patients: insights from functional MRI and diffusion tensor imaging. Imaging Med. 2013 Aug 01; 5(4):333-346. PMID: 24660024.
    Citations: 1     
  43. Huang RY, Chai BB, Lee TC. Effect of region-of-interest placement in bolus tracking cerebral computed tomography angiography. Neuroradiology. 2013 Oct; 55(10):1183-8. PMID: 23842989.
    Citations:    Fields:    Translation:Humans
  44. Huang RY, Rahman R, Hamdan A, Kane C, Chen C, Norden AD, Reardon DA, Mukundun S, Wen PY. Recurrent glioblastoma: volumetric assessment and stratification of patient survival with early posttreatment magnetic resonance imaging in patients treated with bevacizumab. Cancer. 2013 Oct 01; 119(19):3479-88. PMID: 23821555.
    Citations: 12     Fields:    Translation:Humans
  45. Tie Y, Rigolo L, Norton IH, Huang RY, Wu W, Orringer D, Mukundan S, Golby AJ. Defining language networks from resting-state fMRI for surgical planning--a feasibility study. Hum Brain Mapp. 2014 Mar; 35(3):1018-30. PMID: 23288627; PMCID: PMC3683367.
    Citations: 39     Fields:    Translation:Humans
  46. Zhu Y, Young GS, Xue Z, Huang RY, You H, Setayesh K, Hatabu H, Cao F, Wong ST. Semi-automatic segmentation software for quantitative clinical brain glioblastoma evaluation. Acad Radiol. 2012 Aug; 19(8):977-85. PMID: 22591720; PMCID: PMC3515056.
    Citations: 7     Fields:    Translation:Humans
  47. Huang RY, Romano AE, Stone ME, Nathanson N. Diagnosis and treatment of a perforated duodenal diverticulum. Emerg Radiol. 2007 Feb; 13(5):285-7. PMID: 17216177.
    Citations: 2     Fields:    Translation:Humans
  48. Shi W, Zhan C, Ignatov A, Manjasetty BA, Marinkovic N, Sullivan M, Huang R, Chance MR. Metalloproteomics: high-throughput structural and functional annotation of proteins in structural genomics. Structure. 2005 Oct; 13(10):1473-86. PMID: 16216579.
    Citations: 16     Fields:    Translation:Cells
  49. Huang RY, Miller LM, Carlson CS, Chance MR. In situ chemistry of osteoporosis revealed by synchrotron infrared microspectroscopy. Bone. 2003 Oct; 33(4):514-21. PMID: 14555254.
    Citations: 13     Fields:    Translation:HumansAnimals
  50. Huang RY, Boulton SJ, Vidal M, Almo SC, Bresnick AR, Chance MR. High-throughput expression, purification, and characterization of recombinant Caenorhabditis elegans proteins. Biochem Biophys Res Commun. 2003 Aug 08; 307(4):928-34. PMID: 12878200.
    Citations: 2     Fields:    Translation:AnimalsCells
  51. Reboul J, Vaglio P, Rual JF, Lamesch P, Martinez M, Armstrong CM, Li S, Jacotot L, Bertin N, Janky R, Moore T, Hudson JR, Hartley JL, Brasch MA, Vandenhaute J, Boulton S, Endress GA, Jenna S, Chevet E, Papasotiropoulos V, Tolias PP, Ptacek J, Snyder M, Huang R, Chance MR, Lee H, Doucette-Stamm L, Hill DE, Vidal M. C. elegans ORFeome version 1.1: experimental verification of the genome annotation and resource for proteome-scale protein expression. Nat Genet. 2003 May; 34(1):35-41. PMID: 12679813.
    Citations: 145     Fields:    Translation:HumansAnimalsCells
  52. Marinkovic NS, Huang R, Bromberg P, Sullivan M, Toomey J, Miller LM, Sperber E, Moshe S, Jones KW, Chouparova E, Lappi S, Franzen S, Chance MR. Center for Synchrotron Biosciences' U2B beamline: an international resource for biological infrared spectroscopy. J Synchrotron Radiat. 2002 Jul 01; 9(Pt 4):189-97. PMID: 12091724.
    Citations: 6     Fields:    Translation:HumansCells
  53. Chance MR, Bresnick AR, Burley SK, Jiang JS, Lima CD, Sali A, Almo SC, Bonanno JB, Buglino JA, Boulton S, Chen H, Eswar N, He G, Huang R, Ilyin V, McMahan L, Pieper U, Ray S, Vidal M, Wang LK. Structural genomics: a pipeline for providing structures for the biologist. Protein Sci. 2002 Apr; 11(4):723-38. PMID: 11910018.
    Citations: 48     Fields:    Translation:HumansAnimalsCells
  54. Huang RY, Miller LM, Carlson CS, Chance MR. Characterization of bone mineral composition in the proximal tibia of cynomolgus monkeys: effect of ovariectomy and nandrolone decanoate treatment. Bone. 2002 Mar; 30(3):492-7. PMID: 11882463.
    Citations: 12     Fields:    Translation:Animals
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Funded by the NIH/NCATS Clinical and Translational Science Award (CTSA) program, grant number UL1TR001102, and through institutional support from Harvard University, Harvard Medical School, Harvard T.H. Chan School of Public Health, Beth Israel Deaconess Medical Center, Boston Children's Hospital, Brigham and Women's Hospital, Massachusetts General Hospital and the Dana Farber Cancer Institute.