Harvard Catalyst Profiles

Contact, publication, and social network information about Harvard faculty and fellows.

John Quackenbush, Ph.D.

Co-Author

This page shows the publications co-authored by John Quackenbush and John Platig.
Connection Strength

2.511
  1. Bipartite Community Structure of eQTLs. PLoS Comput Biol. 2016 09; 12(9):e1005033.
    View in: PubMed
    Score: 0.696
  2. GRAND: a database of gene regulatory network models across human conditions. Nucleic Acids Res. 2021 Sep 11.
    View in: PubMed
    Score: 0.246
  3. Gene Targeting in Disease Networks. Front Genet. 2021; 12:649942.
    View in: PubMed
    Score: 0.239
  4. Multi-omic regulatory networks capture downstream effects of kinase inhibition in Mycobacterium tuberculosis. NPJ Syst Biol Appl. 2021 01 29; 7(1):8.
    View in: PubMed
    Score: 0.236
  5. Nongenic cancer-risk SNPs affect oncogenes, tumour-suppressor genes, and immune function. Br J Cancer. 2020 02; 122(4):569-577.
    View in: PubMed
    Score: 0.218
  6. Histopathological Image QTL Discovery of Immune Infiltration Variants. iScience. 2018 Jul 27; 5:80-89.
    View in: PubMed
    Score: 0.197
  7. Tissue-aware RNA-Seq processing and normalization for heterogeneous and sparse data. BMC Bioinformatics. 2017 Oct 03; 18(1):437.
    View in: PubMed
    Score: 0.187
  8. Exploring regulation in tissues with eQTL networks. Proc Natl Acad Sci U S A. 2017 09 12; 114(37):E7841-E7850.
    View in: PubMed
    Score: 0.186
  9. Gene regulatory network inference as relaxed graph matching. Proc Conf AAAI Artif Intell. 2021 Feb; 35(11):10263-10272.
    View in: PubMed
    Score: 0.060
  10. Sex Differences in Gene Expression and Regulatory Networks across 29 Human Tissues. Cell Rep. 2020 06 23; 31(12):107795.
    View in: PubMed
    Score: 0.057
  11. Multisystem Analysis of Mycobacterium tuberculosis Reveals Kinase-Dependent Remodeling of the Pathogen-Environment Interface. mBio. 2018 03 06; 9(2).
    View in: PubMed
    Score: 0.048
  12. Ensemble genomic analysis in human lung tissue identifies novel genes for chronic obstructive pulmonary disease. Hum Genomics. 2018 01 15; 12(1):1.
    View in: PubMed
    Score: 0.048
  13. Understanding Tissue-Specific Gene Regulation. Cell Rep. 2017 Oct 24; 21(4):1077-1088.
    View in: PubMed
    Score: 0.047
  14. Regulatory network changes between cell lines and their tissues of origin. BMC Genomics. 2017 Sep 12; 18(1):723.
    View in: PubMed
    Score: 0.047
Connection Strength
The connection strength for co-authors is the sum of the scores for each of their shared publications.

Publication scores are based on many factors, including how long ago they were written and whether the person is a first or senior author.
Funded by the NIH National Center for Advancing Translational Sciences through its Clinical and Translational Science Awards Program, grant number UL1TR002541.