Harvard Catalyst Profiles

Contact, publication, and social network information about Harvard faculty and fellows.

Vincent James Carey, Ph.D.

Other Positions

The research activities and funding listed below are automatically derived from NIH ExPORTER and other sources, which might result in incorrect or missing items. Faculty can login to make corrections and additions.
  1. U24HG010263 (SCHATZ, MICHAEL) Sep 21, 2018 - Jun 30, 2023
    Implementing the Genomic Data Science Analysis, Visualization, and Informatics Lab-space (AnVIL)
    Role: Co-Principal Investigator
  2. U01CA214846 (CAREY, VINCENT JAMES) May 1, 2017 - Apr 30, 2020
    Accelerating Cancer Genomics with Cloud-scale Bioconductor
    Role: Principal Investigator
  3. R21DK098720 (CAREY, VINCENT JAMES) Jan 1, 2014 - Dec 31, 2015
    Role: Principal Investigator

Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
Newest   |   Oldest   |   Most Cited   |   Most Discussed   |   Timeline   |   Field Summary   |   Plain Text
PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
  1. Lu M, Litonjua AA, O'Connor GT, Zeiger RS, Bacharier L, Schatz M, Carey VJ, Weiss ST, Mirzakhani H. Effect of early and late prenatal vitamin D and maternal asthma status on offspring asthma or recurrent wheeze. J Allergy Clin Immunol. 2020 Aug 19. PMID: 32822692.
  2. Gevaert O, Nabian M, Bakr S, Everaert C, Shinde J, Manukyan A, Liefeld T, Tabor T, Xu J, Lupberger J, Haas BJ, Baumert TF, Hernaez M, Reich M, Quintana FJ, Uhlmann EJ, Krichevsky AM, Mesirov JP, Carey V, Pochet N. Imaging-AMARETTO: An Imaging Genomics Software Tool to Interrogate Multiomics Networks for Relevance to Radiography and Histopathology Imaging Biomarkers of Clinical Outcomes. JCO Clin Cancer Inform. 2020 May; 4:421-435. PMID: 32383980.
  3. Carey VJ, Ramos M, Stubbs BJ, Gopaulakrishnan S, Oh S, Turaga N, Waldron L, Morgan M. Global Alliance for Genomics and Health Meets Bioconductor: Toward Reproducible and Agile Cancer Genomics at Cloud Scale. JCO Clin Cancer Inform. 2020 May; 4:472-479. PMID: 32453635.
  4. Lu M, Hollis BW, Carey VJ, Laranjo N, Singh RJ, Weiss ST, Litonjua AA. Determinants and Measurement of Neonatal Vitamin D: Overestimation of 25(OH)D in Cord Blood Using CLIA Assay Technology. J Clin Endocrinol Metab. 2020 Apr 01; 105(4). PMID: 31872219.
  5. Geistlinger L, Csaba G, Santarelli M, Ramos M, Schiffer L, Turaga N, Law C, Davis S, Carey V, Morgan M, Zimmer R, Waldron L. Toward a gold standard for benchmarking gene set enrichment analysis. Brief Bioinform. 2020 Feb 06. PMID: 32026945.
  6. Litonjua AA, Carey VJ, Laranjo N, Stubbs BJ, Mirzakhani H, O'Connor GT, Sandel M, Beigelman A, Bacharier LB, Zeiger RS, Schatz M, Hollis BW, Weiss ST. Six-Year Follow-up of a Trial of Antenatal Vitamin D for Asthma Reduction. N Engl J Med. 2020 02 06; 382(6):525-533. PMID: 32023372.
  7. Amezquita RA, Lun ATL, Becht E, Carey VJ, Carpp LN, Geistlinger L, Marini F, Rue-Albrecht K, Risso D, Soneson C, Waldron L, Pagès H, Smith ML, Huber W, Morgan M, Gottardo R, Hicks SC. Publisher Correction: Orchestrating single-cell analysis with Bioconductor. Nat Methods. 2020 Feb; 17(2):242. PMID: 31827272.
  8. Du R, Carey V, Weiss ST. deconvSeq: deconvolution of cell mixture distribution in sequencing data. Bioinformatics. 2019 12 15; 35(24):5095-5102. PMID: 31147676.
  9. Amezquita RA, Lun ATL, Becht E, Carey VJ, Carpp LN, Geistlinger L, Marini F, Rue-Albrecht K, Risso D, Soneson C, Waldron L, Pagès H, Smith ML, Huber W, Morgan M, Gottardo R, Hicks SC. Orchestrating single-cell analysis with Bioconductor. Nat Methods. 2020 02; 17(2):137-145. PMID: 31792435.
  10. Lee-Sarwar KA, Kelly RS, Lasky-Su J, Zeiger RS, O'Connor GT, Sandel MT, Bacharier LB, Beigelman A, Rifas-Shiman SL, Carey VJ, Harshfield BJ, Laranjo N, Gold DR, Weiss ST, Litonjua AA. Fecal short-chain fatty acids in pregnancy and offspring asthma and allergic outcomes. J Allergy Clin Immunol Pract. 2020 Mar; 8(3):1100-1102.e13. PMID: 31494295.
  11. Mirzakhani H, Carey VJ, McElrath TF, Hollis BW, O'Connor GT, Zeiger RS, Bacharier L, Litonjua AA, Weiss ST. Maternal Asthma, Preeclampsia, and Risk for Childhood Asthma at Age Six. Am J Respir Crit Care Med. 2019 09 01; 200(5):638-642. PMID: 31059286.
  12. Park J, Hobbs BD, Crapo JD, Make BJ, Regan EA, Humphries S, Carey VJ, Lynch DA, Silverman EK. Subtyping COPD by Using Visual and Quantitative CT Imaging Features. Chest. 2020 01; 157(1):47-60. PMID: 31283919.
  13. Hillier SL, Ferrieri P, Edwards MS, Ewell M, Ferris D, Fine P, Carey V, Meyn L, Hoagland D, Kasper DL, Paoletti LC, Hill H, Baker CJ. A Phase 2, Randomized, Control Trial of Group B Streptococcus (GBS) Type III Capsular Polysaccharide-tetanus Toxoid (GBS III-TT) Vaccine to Prevent Vaginal Colonization With GBS III. Clin Infect Dis. 2019 05 30; 68(12):2079-2086. PMID: 30281066.
    Citations:    Fields:    
  14. Su S, Carey VJ, Shepherd L, Ritchie M, Morgan MT, Davis S. BiocPkgTools: Toolkit for mining the Bioconductor package ecosystem. F1000Res. 2019; 8:752. PMID: 31249680.
  15. Stone G, Choi A, Meritxell O, Gorham J, Heydarpour M, Seidman CE, Seidman JG, Aranki SF, Body SC, Carey VJ, Raby BA, Stranger BE, Muehlschlegel JD. Sex differences in gene expression in response to ischemia in the human left ventricular myocardium. Hum Mol Genet. 2019 05 15; 28(10):1682-1693. PMID: 30649309.
    Citations:    Fields:    
  16. Kelly RS, Boulin A, Laranjo N, Lee-Sarwar K, Chu SH, Yadama AP, Carey V, Litonjua AA, Lasky-Su J, Weiss ST. Metabolomics and Communication Skills Development in Children; Evidence from the Ages and Stages Questionnaire. Metabolites. 2019 Mar 05; 9(3). PMID: 30841573.
  17. Sordillo JE, Korrick S, Laranjo N, Carey V, Weinstock GM, Gold DR, O'Connor G, Sandel M, Bacharier LB, Beigelman A, Zeiger R, Litonjua AA, Weiss ST. Association of the Infant Gut Microbiome With Early Childhood Neurodevelopmental Outcomes: An Ancillary Study to the VDAART Randomized Clinical Trial. JAMA Netw Open. 2019 03 01; 2(3):e190905. PMID: 30901046.
  18. Stubbs BJ, Gopaulakrishnan S, Glass K, Pochet N, Everaert C, Raby B, Carey V. TFutils: Data structures for transcription factor bioinformatics. F1000Res. 2019; 8:152. PMID: 31297189.
  19. Tarca AL, Romero R, Xu Z, Gomez-Lopez N, Erez O, Hsu CD, Hassan SS, Carey VJ. Targeted expression profiling by RNA-Seq improves detection of cellular dynamics during pregnancy and identifies a role for T cells in term parturition. Sci Rep. 2019 01 29; 9(1):848. PMID: 30696862.
    Citations:    Fields:    
  20. Gopaulakrishnan S, Pollack S, Stubbs BJ, Pagès H, Readey J, Davis S, Waldron L, Morgan M, Carey V. restfulSE: A semantically rich interface for cloud-scale genomics with Bioconductor. F1000Res. 2019; 8:21. PMID: 30828438.
  21. Mirzakhani H, Carey VJ, Zeiger R, Bacharier LB, O'Connor GT, Schatz MX, Laranjo N, Weiss ST, Litonjua AA. Impact of parental asthma, prenatal maternal asthma control, and vitamin D status on risk of asthma and recurrent wheeze in 3-year-old children. Clin Exp Allergy. 2019 04; 49(4):419-429. PMID: 30461089.
    Citations:    Fields:    
  22. Mirzakhani H, Carey VJ, McElrath TF, Qiu W, Hollis BW, O'Connor GT, Zeiger RS, Bacharier L, Litonjua AA, Weiss ST. Impact of Preeclampsia on the Relationship between Maternal Asthma and Offspring Asthma. An Observation from the VDAART Clinical Trial. Am J Respir Crit Care Med. 2019 01 01; 199(1):32-42. PMID: 30153046.
    Citations:    Fields:    
  23. Mirzakhani H, Al-Garawi AA, Carey VJ, Qiu W, Litonjua AA, Weiss ST. Expression network analysis reveals cord blood vitamin D-associated genes affecting risk of early life wheeze. Thorax. 2019 02; 74(2):200-202. PMID: 30021811.
    Citations:    Fields:    
  24. Kothari PH, Qiu W, Croteau-Chonka DC, Martinez FD, Liu AH, Lemanske RF, Ober C, Krishnan JA, Nicolae DL, Barnes KC, London SJ, Barraza-Villarreal A, White SR, Naureckas ET, Millstein J, Gauderman WJ, Gilliland FD, Carey VJ, Weiss ST, Raby BA. Role of local CpG DNA methylation in mediating the 17q21 asthma susceptibility gasdermin B (GSDMB)/ORMDL sphingolipid biosynthesis regulator 3 (ORMDL3) expression quantitative trait locus. J Allergy Clin Immunol. 2018 06; 141(6):2282-2286.e6. PMID: 29374573.
    Citations: 2     Fields:    
  25. Ramos M, Schiffer L, Re A, Azhar R, Basunia A, Rodriguez C, Chan T, Chapman P, Davis SR, Gomez-Cabrero D, Culhane AC, Haibe-Kains B, Hansen KD, Kodali H, Louis MS, Mer AS, Riester M, Morgan M, Carey V, Waldron L. Software for the Integration of Multiomics Experiments in Bioconductor. Cancer Res. 2017 11 01; 77(21):e39-e42. PMID: 29092936.
    Citations: 3     Fields:    Translation:Humans
  26. Juraschek SP, Woodward M, Sacks FM, Carey VJ, Miller ER, Appel LJ. Time Course of Change in Blood Pressure From Sodium Reduction and the DASH Diet. Hypertension. 2017 11; 70(5):923-929. PMID: 28993451.
    Citations: 3     Fields:    Translation:Humans
  27. Huang L, Carey V, Lindsey JC, Marzan F, Gingrich D, Graham B, Barlow-Mosha L, Ssemambo PK, Kamthunzi P, Nachman S, Parikh S, Aweeka FT. Concomitant nevirapine impacts pharmacokinetic exposure to the antimalarial artemether-lumefantrine in African children. PLoS One. 2017; 12(10):e0186589. PMID: 29065172.
    Citations: 2     Fields:    Translation:Humans
  28. Wang J, Heng YJ, Eliassen AH, Tamimi RM, Hazra A, Carey VJ, Ambrosone CB, de Andrade VP, Brufsky A, Couch FJ, King TA, Modugno F, Vachon CM, Hunter DJ, Beck AH, Hankinson SE. Alcohol consumption and breast tumor gene expression. Breast Cancer Res. 2017 Sep 12; 19(1):108. PMID: 28899409.
    Citations:    Fields:    Translation:Humans
  29. Mirzakhani H, Carey VJ, McElrath TF, Laranjo N, O'Connor G, Iverson RE, Lee-Parritz A, Strunk RC, Bacharier LB, Macones GA, Zeiger RS, Schatz M, Hollis BW, Litonjua AA, Weiss ST. The Association of Maternal Asthma and Early Pregnancy Vitamin D with Risk of Preeclampsia: An Observation From Vitamin D Antenatal Asthma Reduction Trial (VDAART). J Allergy Clin Immunol Pract. 2018 Mar - Apr; 6(2):600-608.e2. PMID: 28923490.
    Citations: 2     Fields:    
  30. Cressey TR, Yogev R, Wiznia A, Hazra R, Jean-Philippe P, Graham B, Gonzalez A, Britto P, Carey VJ, Fletcher CV, Acosta EP. Pharmacokinetics of Darunavir/Ritonavir With Etravirine Both Twice Daily in Human Immunodeficiency Virus-Infected Adolescents and Young Adults. J Pediatric Infect Dis Soc. 2017 Sep 01; 6(3):294-296. PMID: 27103489.
    Citations:    Fields:    Translation:HumansCTClinical Trials
  31. Agwu AL, Warshaw MG, McFarland EJ, Siberry GK, Melvin AJ, Wiznia AA, Fairlie L, Boyd S, Harding P, Spiegel HML, Abrams EJ, Carey VJ. Decline in CD4 T lymphocytes with monotherapy bridging strategy for non-adherent adolescents living with HIV infection: Results of the IMPAACT P1094 randomized trial. PLoS One. 2017; 12(6):e0178075. PMID: 28604824.
    Citations:    Fields:    Translation:HumansCellsCTClinical Trials
  32. Hornsby E, Pfeffer PE, Laranjo N, Cruikshank W, Tuzova M, Litonjua AA, Weiss ST, Carey VJ, O'Connor G, Hawrylowicz C. Vitamin D supplementation during pregnancy: Effect on the neonatal immune system in a randomized controlled trial. J Allergy Clin Immunol. 2018 01; 141(1):269-278.e1. PMID: 28552588.
    Citations: 6     Fields:    
  33. Wolsk HM, Harshfield BJ, Laranjo N, Carey VJ, O'Connor G, Sandel M, Strunk RC, Bacharier LB, Zeiger RS, Schatz M, Hollis BW, Weiss ST, Litonjua AA. Vitamin D supplementation in pregnancy, prenatal 25(OH)D levels, race, and subsequent asthma or recurrent wheeze in offspring: Secondary analyses from the Vitamin D Antenatal Asthma Reduction Trial. J Allergy Clin Immunol. 2017 Nov; 140(5):1423-1429.e5. PMID: 28285844.
    Citations: 7     Fields:    Translation:Humans
  34. Quiroz-Zárate A, Harshfield BJ, Hu R, Knoblauch N, Beck AH, Hankinson SE, Carey V, Tamimi RM, Hunter DJ, Quackenbush J, Hazra A. Expression Quantitative Trait loci (QTL) in tumor adjacent normal breast tissue and breast tumor tissue. PLoS One. 2017; 12(2):e0170181. PMID: 28152060.
    Citations:    Fields:    Translation:Humans
  35. Warshaw MG, Carey VJ, McFarland EJ, Dawson L, Abrams E, Melvin A, Fairlie L, Spiegel H, Jay J, Agwu AL. The interaction between equipoise and logistics in clinical trials: A case study. Clin Trials. 2017 Jun; 14(3):314-318. PMID: 28135804.
    Citations:    Fields:    Translation:Humans
  36. Croteau-Chonka DC, Qiu W, Martinez FD, Strunk RC, Lemanske RF, Liu AH, Gilliland FD, Millstein J, Gauderman WJ, Ober C, Krishnan JA, White SR, Naureckas ET, Nicolae DL, Barnes KC, London SJ, Barraza-Villarreal A, Carey VJ, Weiss ST, Raby BA. Gene Expression Profiling in Blood Provides Reproducible Molecular Insights into Asthma Control. Am J Respir Crit Care Med. 2017 01 15; 195(2):179-188. PMID: 27494826.
    Citations: 7     Fields:    Translation:HumansCells
  37. Kelly RS, Croteau-Chonka DC, Dahlin A, Mirzakhani H, Wu AC, Wan ES, McGeachie MJ, Qiu W, Sordillo JE, Al-Garawi A, Gray KJ, McElrath TF, Carey VJ, Clish CB, Litonjua AA, Weiss ST, Lasky-Su JA. Integration of metabolomic and transcriptomic networks in pregnant women reveals biological pathways and predictive signatures associated with preeclampsia. Metabolomics. 2017 Jan; 13(1). PMID: 28596717.
    Citations: 4     
  38. Cressey TR, Hazra R, Wiznia A, Foca M, Jean-Philippe P, Graham B, King JR, Britto P, Carey VJ, Acosta EP, Yogev R. Pharmacokinetics of Unboosted Atazanavir in Treatment-experienced HIV-infected Children, Adolescents and Young Adults. Pediatr Infect Dis J. 2016 12; 35(12):1333-1335. PMID: 27583590.
    Citations:    Fields:    Translation:Humans
  39. Mirzakhani H, Litonjua AA, McElrath TF, O'Connor G, Lee-Parritz A, Iverson R, Macones G, Strunk RC, Bacharier LB, Zeiger R, Hollis BW, Handy DE, Sharma A, Laranjo N, Carey V, Qiu W, Santolini M, Liu S, Chhabra D, Enquobahrie DA, Williams MA, Loscalzo J, Weiss ST. Early pregnancy vitamin D status and risk of preeclampsia. J Clin Invest. 2016 12 01; 126(12):4702-4715. PMID: 27841759.
    Citations: 14     Fields:    Translation:Humans
  40. Juraschek SP, Miller ER, Selvin E, Carey VJ, Appel LJ, Christenson RH, Sacks FM. Effect of type and amount of dietary carbohydrate on biomarkers of glucose homeostasis and C reactive protein in overweight or obese adults: results from the OmniCarb trial. BMJ Open Diabetes Res Care. 2016; 4(1):e000276. PMID: 27933186.
  41. Sordillo JE, Zhou Y, McGeachie MJ, Ziniti J, Lange N, Laranjo N, Savage JR, Carey V, O'Connor G, Sandel M, Strunk R, Bacharier L, Zeiger R, Weiss ST, Weinstock G, Gold DR, Litonjua AA. Factors influencing the infant gut microbiome at age 3-6 months: Findings from the ethnically diverse Vitamin D Antenatal Asthma Reduction Trial (VDAART). J Allergy Clin Immunol. 2017 02; 139(2):482-491.e14. PMID: 27746239.
    Citations: 5     Fields:    Translation:HumansCellsCTClinical Trials
  42. Al-Garawi A, Carey VJ, Chhabra D, Mirzakhani H, Morrow J, Lasky-Su J, Qiu W, Laranjo N, Litonjua AA, Weiss ST. The Role of Vitamin D in the Transcriptional Program of Human Pregnancy. PLoS One. 2016; 11(10):e0163832. PMID: 27711190.
    Citations: 3     Fields:    Translation:HumansCells
  43. Foca M, Yogev R, Wiznia A, Hazra R, Jean-Philippe P, Graham B, Britto P, Carey VJ, King J, Acosta EP, Cressey TR. Rilpivirine Pharmacokinetics Without and With Darunavir/Ritonavir Once Daily in Adolescents and Young Adults. Pediatr Infect Dis J. 2016 09; 35(9):e271-4. PMID: 27187753.
    Citations:    Fields:    Translation:Humans
  44. Asare AL, Carey VJ, Rotrosen D, Nepom GT. Clinical trial data access: Opening doors with TrialShare. J Allergy Clin Immunol. 2016 09; 138(3):724-726. PMID: 27474121.
    Citations: 1     Fields:    Translation:Humans
  45. Bashan A, Gibson TE, Friedman J, Carey VJ, Weiss ST, Hohmann EL, Liu YY. Universality of human microbial dynamics. Nature. 2016 06 09; 534(7606):259-62. PMID: 27279224.
    Citations: 34     Fields:    Translation:HumansCells
  46. Kho AT, Chhabra D, Sharma S, Qiu W, Carey VJ, Gaedigk R, Vyhlidal CA, Leeder JS, Tantisira KG, Weiss ST. Age, Sexual Dimorphism, and Disease Associations in the Developing Human Fetal Lung Transcriptome. Am J Respir Cell Mol Biol. 2016 06; 54(6):814-21. PMID: 26584061.
    Citations: 8     Fields:    Translation:HumansCells
  47. Litonjua AA, Carey VJ, Laranjo N, Harshfield BJ, McElrath TF, O'Connor GT, Sandel M, Iverson RE, Lee-Paritz A, Strunk RC, Bacharier LB, Macones GA, Zeiger RS, Schatz M, Hollis BW, Hornsby E, Hawrylowicz C, Wu AC, Weiss ST. Effect of Prenatal Supplementation With Vitamin D on Asthma or Recurrent Wheezing in Offspring by Age 3 Years: The VDAART Randomized Clinical Trial. JAMA. 2016 Jan 26; 315(4):362-70. PMID: 26813209.
    Citations: 59     Fields:    Translation:Humans
  48. Gold DR, Litonjua AA, Carey VJ, Manson JE, Buring JE, Lee IM, Gordon D, Walter J, Friedenberg G, Hankinson JL, Copeland T, Luttmann-Gibson H. Lung VITAL: Rationale, design, and baseline characteristics of an ancillary study evaluating the effects of vitamin D and/or marine omega-3 fatty acid supplements on acute exacerbations of chronic respiratory disease, asthma control, pneumonia and lung function in adults. Contemp Clin Trials. 2016 Mar; 47:185-95. PMID: 26784651.
    Citations: 5     Fields:    Translation:Humans
  49. Croteau-Chonka DC, Rogers AJ, Raj T, McGeachie MJ, Qiu W, Ziniti JP, Stubbs BJ, Liang L, Martinez FD, Strunk RC, Lemanske RF, Liu AH, Stranger BE, Carey VJ, Raby BA. Expression Quantitative Trait Loci Information Improves Predictive Modeling of Disease Relevance of Non-Coding Genetic Variation. PLoS One. 2015; 10(10):e0140758. PMID: 26474488.
    Citations: 4     Fields:    Translation:Humans
  50. Kannan L, Ramos M, Re A, El-Hachem N, Safikhani Z, Gendoo DM, Davis S, Gomez-Cabrero D, Castelo R, Hansen KD, Carey VJ, Morgan M, Culhane AC, Haibe-Kains B, Waldron L. Public data and open source tools for multi-assay genomic investigation of disease. Brief Bioinform. 2016 07; 17(4):603-15. PMID: 26463000.
    Citations: 13     Fields:    
  51. Wan ES, Qiu W, Carey VJ, Morrow J, Bacherman H, Foreman MG, Hokanson JE, Bowler RP, Crapo JD, DeMeo DL. Smoking-Associated Site-Specific Differential Methylation in Buccal Mucosa in the COPDGene Study. Am J Respir Cell Mol Biol. 2015 Aug; 53(2):246-54. PMID: 25517428.
    Citations: 15     Fields:    Translation:HumansCells
  52. Huber W, Carey V, Davis S, Hansen KD, Morgan M. The Bioconductor channel in F1000Research. F1000Res. 2015; 4:217. PMID: 26998224.
  53. Sacks FM, Appel LJ, Carey VJ. Low vs high glycemic index diet--reply. JAMA. 2015 Apr 07; 313(13):1372-3. PMID: 25849187.
    Citations: 1     Fields:    Translation:HumansPHPublic Health
  54. Huber W, Carey VJ, Gentleman R, Anders S, Carlson M, Carvalho BS, Bravo HC, Davis S, Gatto L, Girke T, Gottardo R, Hahne F, Hansen KD, Irizarry RA, Lawrence M, Love MI, MacDonald J, Obenchain V, Oles AK, Pagès H, Reyes A, Shannon P, Smyth GK, Tenenbaum D, Waldron L, Morgan M. Orchestrating high-throughput genomic analysis with Bioconductor. Nat Methods. 2015 Feb; 12(2):115-21. PMID: 25633503.
    Citations: 366     Fields:    
  55. Unizony S, Lim N, Phippard DJ, Carey VJ, Miloslavsky EM, Tchao NK, Iklé D, Asare AL, Merkel PA, Monach PA, Seo P, St Clair EW, Langford CA, Spiera R, Hoffman GS, Kallenberg CG, Specks U, Stone JH. Peripheral CD5+ B cells in antineutrophil cytoplasmic antibody-associated vasculitis. Arthritis Rheumatol. 2015 Feb; 67(2):535-44. PMID: 25332071.
    Citations: 4     Fields:    Translation:HumansCells
  56. Larson KB, Cressey TR, Yogev R, Wiznia A, Hazra R, Jean-Philippe P, Graham B, Gonzalez A, Britto P, Carey VJ, Acosta EP. Pharmacokinetics of Once-Daily Darunavir/Ritonavir With and Without Etravirine in Human Immunodeficiency Virus-Infected Children, Adolescents, and Young Adults. J Pediatric Infect Dis Soc. 2016 Jun; 5(2):131-7. PMID: 27199469.
    Citations: 2     Fields:    Translation:Humans
  57. Sacks FM, Carey VJ, Anderson CA, Miller ER, Copeland T, Charleston J, Harshfield BJ, Laranjo N, McCarron P, Swain J, White K, Yee K, Appel LJ. Effects of high vs low glycemic index of dietary carbohydrate on cardiovascular disease risk factors and insulin sensitivity: the OmniCarb randomized clinical trial. JAMA. 2014 Dec 17; 312(23):2531-41. PMID: 25514303.
    Citations: 30     Fields:    Translation:HumansPHPublic Health
  58. Chhabra D, Sharma S, Kho AT, Gaedigk R, Vyhlidal CA, Leeder JS, Morrow J, Carey VJ, Weiss ST, Tantisira KG, DeMeo DL. Fetal lung and placental methylation is associated with in utero nicotine exposure. Epigenetics. 2014 Nov; 9(11):1473-84. PMID: 25482056.
    Citations: 14     Fields:    Translation:HumansCellsPHPublic Health
  59. Castaldi PJ, Cho MH, Zhou X, Qiu W, Mcgeachie M, Celli B, Bakke P, Gulsvik A, Lomas DA, Crapo JD, Beaty TH, Rennard S, Harshfield B, Lange C, Singh D, Tal-Singer R, Riley JH, Quackenbush J, Raby BA, Carey VJ, Silverman EK, Hersh CP. Genetic control of gene expression at novel and established chronic obstructive pulmonary disease loci. Hum Mol Genet. 2015 Feb 15; 24(4):1200-10. PMID: 25315895.
    Citations: 13     Fields:    Translation:HumansCells
  60. Haspel JA, Chettimada S, Shaik RS, Chu JH, Raby BA, Cernadas M, Carey V, Process V, Hunninghake GM, Ifedigbo E, Lederer JA, Englert J, Pelton A, Coronata A, Fredenburgh LE, Choi AM. Circadian rhythm reprogramming during lung inflammation. Nat Commun. 2014 Sep 11; 5:4753. PMID: 25208554.
    Citations: 24     Fields:    Translation:AnimalsCells
  61. Talayero B, Wang L, Furtado J, Carey VJ, Bray GA, Sacks FM. Obesity favors apolipoprotein E- and C-III-containing high density lipoprotein subfractions associated with risk of heart disease. J Lipid Res. 2014 Oct; 55(10):2167-77. PMID: 24966274.
    Citations: 6     Fields:    Translation:HumansCTClinical Trials
  62. Breton CV, Siegmund KD, Joubert BR, Wang X, Qui W, Carey V, Nystad W, Håberg SE, Ober C, Nicolae D, Barnes KC, Martinez F, Liu A, Lemanske R, Strunk R, Weiss S, London S, Gilliland F, Raby B. Prenatal tobacco smoke exposure is associated with childhood DNA CpG methylation. PLoS One. 2014; 9(6):e99716. PMID: 24964093.
    Citations: 31     Fields:    Translation:HumansCells
  63. Sharma S, Zhou X, Thibault DM, Himes BE, Liu A, Szefler SJ, Strunk R, Castro M, Hansel NN, Diette GB, Vonakis BM, Adkinson NF, Avila L, Soto-Quiros M, Barraza-Villareal A, Lemanske RF, Solway J, Krishnan J, White SR, Cheadle C, Berger AE, Fan J, Boorgula MP, Nicolae D, Gilliland F, Barnes K, London SJ, Martinez F, Ober C, Celedón JC, Carey VJ, Weiss ST, Raby BA. A genome-wide survey of CD4(+) lymphocyte regulatory genetic variants identifies novel asthma genes. J Allergy Clin Immunol. 2014 Nov; 134(5):1153-62. PMID: 24934276.
    Citations: 17     Fields:    Translation:HumansCells
  64. Myers RA, Scott NM, Gauderman WJ, Qiu W, Mathias RA, Romieu I, Levin AM, Pino-Yanes M, Graves PE, Villarreal AB, Beaty TH, Carey VJ, Croteau-Chonka DC, del Rio Navarro B, Edlund C, Hernandez-Cadena L, Navarro-Olivos E, Padhukasahasram B, Salam MT, Torgerson DG, Van den Berg DJ, Vora H, Bleecker ER, Meyers DA, Williams LK, Martinez FD, Burchard EG, Barnes KC, Gilliland FD, Weiss ST, London SJ, Raby BA, Ober C, Nicolae DL. Genome-wide interaction studies reveal sex-specific asthma risk alleles. Hum Mol Genet. 2014 Oct 01; 23(19):5251-9. PMID: 24824216.
    Citations: 12     Fields:    Translation:Humans
  65. Qiu W, Rogers AJ, Damask A, Raby BA, Klanderman BJ, Duan QL, Tyagi S, Niu S, Anderson C, Cahir-Mcfarland E, Mariani TJ, Carey V, Tantisira KG. Pharmacogenomics: novel loci identification via integrating gene differential analysis and eQTL analysis. Hum Mol Genet. 2014 Sep 15; 23(18):5017-24. PMID: 24770851.
    Citations: 4     Fields:    Translation:HumansCells
  66. Obenchain V, Lawrence M, Carey V, Gogarten S, Shannon P, Morgan M. VariantAnnotation: a Bioconductor package for exploration and annotation of genetic variants. Bioinformatics. 2014 Jul 15; 30(14):2076-8. PMID: 24681907.
    Citations: 34     Fields:    
  67. Litonjua AA, Lange NE, Carey VJ, Brown S, Laranjo N, Harshfield BJ, O'Connor GT, Sandel M, Strunk RC, Bacharier LB, Zeiger RS, Schatz M, Hollis BW, Weiss ST. The Vitamin D Antenatal Asthma Reduction Trial (VDAART): rationale, design, and methods of a randomized, controlled trial of vitamin D supplementation in pregnancy for the primary prevention of asthma and allergies in children. Contemp Clin Trials. 2014 May; 38(1):37-50. PMID: 24614387.
    Citations: 24     Fields:    Translation:HumansPHPublic Health
  68. Sacks FM, Hermans MP, Fioretto P, Valensi P, Davis T, Horton E, Wanner C, Al-Rubeaan K, Aronson R, Barzon I, Bishop L, Bonora E, Bunnag P, Chuang LM, Deerochanawong C, Goldenberg R, Harshfield B, Hernández C, Herzlinger-Botein S, Itoh H, Jia W, Jiang YD, Kadowaki T, Laranjo N, Leiter L, Miwa T, Odawara M, Ohashi K, Ohno A, Pan C, Pan J, Pedro-Botet J, Reiner Z, Rotella CM, Simo R, Tanaka M, Tedeschi-Reiner E, Twum-Barima D, Zoppini G, Carey VJ. Association between plasma triglycerides and high-density lipoprotein cholesterol and microvascular kidney disease and retinopathy in type 2 diabetes mellitus: a global case-control study in 13 countries. Circulation. 2014 Mar 04; 129(9):999-1008. PMID: 24352521.
    Citations: 41     Fields:    Translation:Humans
  69. Baker CJ, Carey VJ, Rench MA, Edwards MS, Hillier SL, Kasper DL, Platt R. Maternal antibody at delivery protects neonates from early onset group B streptococcal disease. J Infect Dis. 2014 Mar 01; 209(5):781-8. PMID: 24133184.
    Citations: 22     Fields:    Translation:HumansPHPublic Health
  70. Shioda T, Rosenthal NF, Coser KR, Suto M, Phatak M, Medvedovic M, Carey VJ, Isselbacher KJ. Expressomal approach for comprehensive analysis and visualization of ligand sensitivities of xenoestrogen responsive genes. Proc Natl Acad Sci U S A. 2013 Oct 08; 110(41):16508-13. PMID: 24062438.
    Citations: 7     Fields:    Translation:HumansCells
  71. Vázquez Ede L, Carey VJ, Kaye KM. Identification of Kaposi's sarcoma-associated herpesvirus LANA regions important for episome segregation, replication, and persistence. J Virol. 2013 Nov; 87(22):12270-83. PMID: 24006437.
    Citations: 8     Fields:    Translation:HumansCells
  72. Lawrence M, Huber W, Pagès H, Aboyoun P, Carlson M, Gentleman R, Morgan MT, Carey VJ. Software for computing and annotating genomic ranges. PLoS Comput Biol. 2013; 9(8):e1003118. PMID: 23950696.
    Citations: 376     Fields:    Translation:HumansAnimals
  73. Wan ES, Qiu W, Baccarelli A, Carey VJ, Bacherman H, Rennard SI, Agustí A, Anderson WH, Lomas DA, DeMeo DL. Systemic steroid exposure is associated with differential methylation in chronic obstructive pulmonary disease. Am J Respir Crit Care Med. 2012 Dec 15; 186(12):1248-55. PMID: 23065012.
    Citations: 14     Fields:    Translation:HumansCells
  74. Kiser JJ, Zhu R, D'Argenio DZ, Cotton MF, Bobat R, McSherry GD, Madhi SA, Carey VJ, Seifart HI, Werely CJ, Fletcher CV. Isoniazid pharmacokinetics, pharmacodynamics, and dosing in South African infants. Ther Drug Monit. 2012 Aug; 34(4):446-51. PMID: 22695364.
    Citations: 5     Fields:    Translation:HumansCells
  75. Himes BE, Jiang X, Hu R, Wu AC, Lasky-Su JA, Klanderman BJ, Ziniti J, Senter-Sylvia J, Lima JJ, Irvin CG, Peters SP, Meyers DA, Bleecker ER, Kubo M, Tamari M, Nakamura Y, Szefler SJ, Lemanske RF, Zeiger RS, Strunk RC, Martinez FD, Hanrahan JP, Koppelman GH, Postma DS, Nieuwenhuis MA, Vonk JM, Panettieri RA, Markezich A, Israel E, Carey VJ, Tantisira KG, Litonjua AA, Lu Q, Weiss ST. Genome-wide association analysis in asthma subjects identifies SPATS2L as a novel bronchodilator response gene. PLoS Genet. 2012 Jul; 8(7):e1002824. PMID: 22792082.
    Citations: 28     Fields:    Translation:HumansCells
  76. Anton SD, Gallagher J, Carey VJ, Laranjo N, Cheng J, Champagne CM, Ryan DH, McManus K, Loria CM, Bray GA, Sacks FM, Williamson DA. Diet type and changes in food cravings following weight loss: findings from the POUNDS LOST Trial. Eat Weight Disord. 2012 Jun; 17(2):e101-8. PMID: 23010779.
    Citations: 5     Fields:    Translation:Humans
  77. Wan ES, Qiu W, Baccarelli A, Carey VJ, Bacherman H, Rennard SI, Agusti A, Anderson W, Lomas DA, Demeo DL. Cigarette smoking behaviors and time since quitting are associated with differential DNA methylation across the human genome. Hum Mol Genet. 2012 Jul 01; 21(13):3073-82. PMID: 22492999.
    Citations: 105     Fields:    Translation:HumansCells
  78. de Souza RJ, Bray GA, Carey VJ, Hall KD, LeBoff MS, Loria CM, Laranjo NM, Sacks FM, Smith SR. Effects of 4 weight-loss diets differing in fat, protein, and carbohydrate on fat mass, lean mass, visceral adipose tissue, and hepatic fat: results from the POUNDS LOST trial. Am J Clin Nutr. 2012 Mar; 95(3):614-25. PMID: 22258266.
    Citations: 38     Fields:    Translation:Humans
  79. Qiu W, Baccarelli A, Carey VJ, Boutaoui N, Bacherman H, Klanderman B, Rennard S, Agusti A, Anderson W, Lomas DA, DeMeo DL. Variable DNA methylation is associated with chronic obstructive pulmonary disease and lung function. Am J Respir Crit Care Med. 2012 Feb 15; 185(4):373-81. PMID: 22161163.
    Citations: 48     Fields:    Translation:HumansCells
  80. Aschard H, Qiu W, Pasaniuc B, Zaitlen N, Cho MH, Carey V. Combining effects from rare and common genetic variants in an exome-wide association study of sequence data. BMC Proc. 2011 Nov 29; 5 Suppl 9:S44. PMID: 22373328.
    Citations: 2     
  81. Bray GA, Smith SR, DeJonge L, de Souza R, Rood J, Champagne CM, Laranjo N, Carey V, Obarzanek E, Loria CM, Anton SD, Ryan DH, Greenway FL, Williamson D, Sacks FM. Effect of diet composition on energy expenditure during weight loss: the POUNDS LOST Study. Int J Obes (Lond). 2012 Mar; 36(3):448-55. PMID: 21946707.
    Citations: 6     Fields:    Translation:Humans
  82. Carey VJ, Wang YG. Working covariance model selection for generalized estimating equations. Stat Med. 2011 Nov 20; 30(26):3117-24. PMID: 21748775.
    Citations:    Fields:    Translation:Humans
  83. Melén E, Kho AT, Sharma S, Gaedigk R, Leeder JS, Mariani TJ, Carey VJ, Weiss ST, Tantisira KG. Expression analysis of asthma candidate genes during human and murine lung development. Respir Res. 2011 Jun 23; 12:86. PMID: 21699702.
    Citations: 25     Fields:    Translation:HumansAnimals
  84. King JR, Yogev R, Jean-Philippe P, Graham B, Wiznia A, Britto P, Carey V, Hazra R, Acosta EP. Steady-state pharmacokinetics of tenofovir-based regimens in HIV-infected pediatric patients. Antimicrob Agents Chemother. 2011 Sep; 55(9):4290-4. PMID: 21670182.
    Citations: 5     Fields:    Translation:HumansCTClinical Trials
  85. Chu JH, Lazarus R, Carey VJ, Raby BA. Quantifying differential gene connectivity between disease states for objective identification of disease-relevant genes. BMC Syst Biol. 2011 May 31; 5:89. PMID: 21627793.
    Citations: 6     Fields:    Translation:HumansCells
  86. Hunninghake GM, Chu JH, Sharma SS, Cho MH, Himes BE, Rogers AJ, Murphy A, Carey VJ, Raby BA. The CD4+ T-cell transcriptome and serum IgE in asthma: IL17RB and the role of sex. BMC Pulm Med. 2011 Apr 07; 11:17. PMID: 21473777.
    Citations: 7     Fields:    Translation:HumansCells
  87. Sharma S, Murphy A, Howrylak J, Himes B, Cho MH, Chu JH, Hunninghake GM, Fuhlbrigge A, Klanderman B, Ziniti J, Senter-Sylvia J, Liu A, Szefler SJ, Strunk R, Castro M, Hansel NN, Diette GB, Vonakis BM, Adkinson NF, Carey VJ, Raby BA. The impact of self-identified race on epidemiologic studies of gene expression. Genet Epidemiol. 2011 Feb; 35(2):93-101. PMID: 21254216.
    Citations: 6     Fields:    Translation:HumansCellsCTClinical Trials
  88. Millán Núñez-Cortés J, Montoya JP, Salas XP, Hernández Mijares A, Carey VJ, Hermans MP, Sacks FM, Fruchart JC. [The REALIST (REsiduAl risk, LIpids and Standard Therapies) study: an analysis of residual risk attributable to lipid profile in acute coronary syndrome]. Endocrinol Nutr. 2011 Jan; 58(1):38-47. PMID: 21208833.
    Citations: 3     Fields:    Translation:Humans
  89. Murphy A, Chu JH, Xu M, Carey VJ, Lazarus R, Liu A, Szefler SJ, Strunk R, Demuth K, Castro M, Hansel NN, Diette GB, Vonakis BM, Adkinson NF, Klanderman BJ, Senter-Sylvia J, Ziniti J, Lange C, Pastinen T, Raby BA. Mapping of numerous disease-associated expression polymorphisms in primary peripheral blood CD4+ lymphocytes. Hum Mol Genet. 2010 Dec 01; 19(23):4745-57. PMID: 20833654.
    Citations: 61     Fields:    Translation:HumansCells
  90. Furtado JD, Campos H, Sumner AE, Appel LJ, Carey VJ, Sacks FM. Dietary interventions that lower lipoproteins containing apolipoprotein C-III are more effective in whites than in blacks: results of the OmniHeart trial. Am J Clin Nutr. 2010 Oct; 92(4):714-22. PMID: 20826623.
    Citations: 7     Fields:    Translation:Humans
  91. Troy EB, Carey VJ, Kasper DL, Comstock LE. Orientations of the Bacteroides fragilis capsular polysaccharide biosynthesis locus promoters during symbiosis and infection. J Bacteriol. 2010 Nov; 192(21):5832-6. PMID: 20729352.
    Citations: 4     Fields:    Translation:AnimalsCells
  92. Sacks FM, Carey VJ, Fruchart JC. Combination lipid therapy in type 2 diabetes. N Engl J Med. 2010 08 12; 363(7):692-4; author reply 694-5. PMID: 20842772.
    Citations: 41     Fields:    Translation:Humans
  93. Carey VJ, Bishop L, Laranjo N, Harshfield BJ, Kwiat C, Sacks FM. Contribution of high plasma triglycerides and low high-density lipoprotein cholesterol to residual risk of coronary heart disease after establishment of low-density lipoprotein cholesterol control. Am J Cardiol. 2010 Sep 15; 106(6):757-63. PMID: 20816113.
    Citations: 31     Fields:    Translation:Humans
  94. Williamson DA, Anton SD, Han H, Champagne CM, Allen R, Leblanc E, Ryan DH, Rood J, McManus K, Laranjo N, Carey VJ, Loria CM, Bray GA, Sacks FM. Early behavioral adherence predicts short and long-term weight loss in the POUNDS LOST study. J Behav Med. 2010 Aug; 33(4):305-14. PMID: 20195742.
    Citations: 11     Fields:    Translation:HumansCTClinical Trials
  95. Sharma S, Tantisira K, Carey V, Murphy AJ, Lasky-Su J, Celedón JC, Lazarus R, Klanderman B, Rogers A, Soto-Quirós M, Avila L, Mariani T, Gaedigk R, Leeder S, Torday J, Warburton D, Raby B, Weiss ST. A role for Wnt signaling genes in the pathogenesis of impaired lung function in asthma. Am J Respir Crit Care Med. 2010 Feb 15; 181(4):328-36. PMID: 19926868.
    Citations: 30     Fields:    Translation:Humans
  96. Williamson DA, Anton SD, Han H, Champagne CM, Allen R, LeBlanc E, Ryan DH, McManus K, Laranjo N, Carey VJ, Loria CM, Bray GA, Sacks FM. Adherence is a multi-dimensional construct in the POUNDS LOST trial. J Behav Med. 2010 Feb; 33(1):35-46. PMID: 19856202.
    Citations: 16     Fields:    Translation:Humans
  97. Kho AT, Bhattacharya S, Tantisira KG, Carey VJ, Gaedigk R, Leeder JS, Kohane IS, Weiss ST, Mariani TJ. Transcriptomic analysis of human lung development. Am J Respir Crit Care Med. 2010 Jan 01; 181(1):54-63. PMID: 19815808.
    Citations: 40     Fields:    Translation:Humans
  98. Shiu C, Cunningham CK, Greenough T, Muresan P, Sanchez-Merino V, Carey V, Jackson JB, Ziemniak C, Fox L, Belzer M, Ray SC, Luzuriaga K, Persaud D. Identification of ongoing human immunodeficiency virus type 1 (HIV-1) replication in residual viremia during recombinant HIV-1 poxvirus immunizations in patients with clinically undetectable viral loads on durable suppressive highly active antiretroviral therapy. J Virol. 2009 Oct; 83(19):9731-42. PMID: 19605490.
    Citations: 25     Fields:    Translation:HumansCellsPHPublic Health
  99. Du R, Tantisira K, Carey V, Bhattacharya S, Metje S, Kho AT, Klanderman BJ, Gaedigk R, Lazarus R, Mariani TJ, Leeder JS, Weiss ST. Platform dependence of inference on gene-wise and gene-set involvement in human lung development. BMC Bioinformatics. 2009 Jun 19; 10:189. PMID: 19545372.
    Citations: 2     Fields:    Translation:Humans
  100. Chu JH, Weiss ST, Carey VJ, Raby BA. A graphical model approach for inferring large-scale networks integrating gene expression and genetic polymorphism. BMC Syst Biol. 2009 May 27; 3:55. PMID: 19473523.
    Citations: 11     Fields:    Translation:Humans
  101. Lawrence M, Gentleman R, Carey V. rtracklayer: an R package for interfacing with genome browsers. Bioinformatics. 2009 Jul 15; 25(14):1841-2. PMID: 19468054.
    Citations: 77     Fields:    
  102. Kim WJ, Silverman EK, Hoffman E, Criner GJ, Mosenifar Z, Sciurba FC, Make BJ, Carey V, San José Estépar R, Diaz A, Reilly JJ, Martinez FJ, Washko GR. CT metrics of airway disease and emphysema in severe COPD. Chest. 2009 Aug; 136(2):396-404. PMID: 19411295.
    Citations: 36     Fields:    Translation:Humans
  103. Carey VJ, Davis AR, Lawrence MF, Gentleman R, Raby BA. Data structures and algorithms for analysis of genetics of gene expression with Bioconductor: GGtools 3.x. Bioinformatics. 2009 Jun 01; 25(11):1447-8. PMID: 19349284.
    Citations: 10     Fields:    
  104. Sacks FM, Bray GA, Carey VJ, Smith SR, Ryan DH, Anton SD, McManus K, Champagne CM, Bishop LM, Laranjo N, Leboff MS, Rood JC, de Jonge L, Greenway FL, Loria CM, Obarzanek E, Williamson DA. Comparison of weight-loss diets with different compositions of fat, protein, and carbohydrates. N Engl J Med. 2009 Feb 26; 360(9):859-73. PMID: 19246357.
    Citations: 382     Fields:    Translation:Humans
  105. King JR, Acosta EP, Yogev R, Wiznia A, Kraimer J, Graham B, Carey V, Britto P, Jean-Philippe P, Moye J, Watson D. Steady-state pharmacokinetics of lopinavir/ritonavir in combination with efavirenz in human immunodeficiency virus-infected pediatric patients. Pediatr Infect Dis J. 2009 Feb; 28(2):159-61. PMID: 19106779.
    Citations: 4     Fields:    Translation:HumansCTClinical Trials
  106. Carey VJ, Gentleman R. Interpreting genetics of gene expression: integrative architecture in Bioconductor. Pac Symp Biocomput. 2009; 380-90. PMID: 19209716.
    Citations: 1     Fields:    Translation:Humans
  107. Foudi A, Hochedlinger K, Van Buren D, Schindler JW, Jaenisch R, Carey V, Hock H. Analysis of histone 2B-GFP retention reveals slowly cycling hematopoietic stem cells. Nat Biotechnol. 2009 Jan; 27(1):84-90. PMID: 19060879.
    Citations: 178     Fields:    Translation:HumansAnimalsCells
  108. Baron MJ, Wong SL, Nybakken K, Carey VJ, Madoff LC. Host glycosaminoglycan confers susceptibility to bacterial infection in Drosophila melanogaster. Infect Immun. 2009 Feb; 77(2):860-6. PMID: 19047407.
    Citations: 5     Fields:    Translation:AnimalsCells
  109. Asare AL, Gao Z, Carey VJ, Wang R, Seyfert-Margolis V. Power enhancement via multivariate outlier testing with gene expression arrays. Bioinformatics. 2009 Jan 01; 25(1):48-53. PMID: 19015138.
    Citations: 12     Fields:    Translation:HumansAnimals
  110. Borenshtein D, Fry RC, Groff EB, Nambiar PR, Carey VJ, Fox JG, Schauer DB. Diarrhea as a cause of mortality in a mouse model of infectious colitis. Genome Biol. 2008; 9(8):R122. PMID: 18680595.
    Citations: 18     Fields:    Translation:AnimalsCells
  111. Foreman MG, DeMeo DL, Hersh CP, Carey VJ, Fan VS, Reilly JJ, Shapiro SD, Silverman EK. Polymorphic variation in surfactant protein B is associated with COPD exacerbations. Eur Respir J. 2008 Oct; 32(4):938-44. PMID: 18550614.
    Citations: 17     Fields:    Translation:Humans
  112. Furtado JD, Campos H, Appel LJ, Miller ER, Laranjo N, Carey VJ, Sacks FM. Effect of protein, unsaturated fat, and carbohydrate intakes on plasma apolipoprotein B and VLDL and LDL containing apolipoprotein C-III: results from the OmniHeart Trial. Am J Clin Nutr. 2008 Jun; 87(6):1623-30. PMID: 18541549.
    Citations: 19     Fields:    Translation:Humans
  113. Fuhlbrigge A, Carey VJ, Finkelstein JA, Lozano P, Inui TS, Weiss KB. Are performance measures based on automated medical records valid for physician/practice profiling of asthma care? Med Care. 2008 Jun; 46(6):620-6. PMID: 18520317.
    Citations: 5     Fields:    Translation:Humans
  114. Ben-Porath I, Thomson MW, Carey VJ, Ge R, Bell GW, Regev A, Weinberg RA. An embryonic stem cell-like gene expression signature in poorly differentiated aggressive human tumors. Nat Genet. 2008 May; 40(5):499-507. PMID: 18443585.
    Citations: 897     Fields:    Translation:HumansCells
  115. Carey VJ, Gentry J, Sarkar R, Gentleman D, Ramaswamy S. SGDI: system for genomic data integration. Pac Symp Biocomput. 2008; 141-52. PMID: 18229682.
    Citations: 1     Fields:    Translation:Humans
  116. Tishler PV, Carey VJ. Can comparison of MZ- and DZ-twin concordance rates be used invariably to estimate heritability? Twin Res Hum Genet. 2007 Oct; 10(5):712-7. PMID: 17903111.
    Citations: 2     Fields:    Translation:Humans
  117. Huber W, Carey VJ, Long L, Falcon S, Gentleman R. Graphs in molecular biology. BMC Bioinformatics. 2007 Sep 27; 8 Suppl 6:S8. PMID: 17903289.
    Citations: 29     Fields:    Translation:Cells
  118. Tarca AL, Carey VJ, Chen XW, Romero R, Draghici S. Machine learning and its applications to biology. PLoS Comput Biol. 2007 Jun; 3(6):e116. PMID: 17604446.
    Citations: 86     Fields:    
  119. Vincent Carey, A Weinberg, S Pahwa, A Kovacs, S Burchett, and ACTG 366 Study Group. Prognostic Value of 3-Color Flow Cytometry in Advanced Pediatric HIV Disease. CROI 2007: 14th Conference on Retroviruses and Opportunistic Infections. 2007; 14.
  120. VJ Carey, BJ Harshfield. 2007.
  121. Carey VJ, Morgan M, Falcon S, Lazarus R, Gentleman R. GGtools: analysis of genetics of gene expression in bioconductor. Bioinformatics. 2007 Feb 15; 23(4):522-3. PMID: 17158513.
    Citations: 4     Fields:    
  122. Bilban M, Heintel D, Scharl T, Woelfel T, Auer MM, Porpaczy E, Kainz B, Kröber A, Carey VJ, Shehata M, Zielinski C, Pickl W, Stilgenbauer S, Gaiger A, Wagner O, Jäger U. Deregulated expression of fat and muscle genes in B-cell chronic lymphocytic leukemia with high lipoprotein lipase expression. Leukemia. 2006 Jun; 20(6):1080-8. PMID: 16617321.
    Citations: 19     Fields:    Translation:HumansCells
  123. Hufnagel M, Carey VJ, Baldassarri L, Reinert RR, Huebner J. Distribution of four capsular serotypes of Enterococcus faecalis among clinical isolates from different geographical origins and infection sites. Infection. 2006 Feb; 34(1):22-5. PMID: 16501898.
    Citations: 3     Fields:    Translation:HumansCells
  124. VJ Carey. GGtools: software for genetics of gene expression. 2006.
  125. Reimers M, Carey VJ. Bioconductor: an open source framework for bioinformatics and computational biology. Methods Enzymol. 2006; 411:119-34. PMID: 16939789.
    Citations: 90     Fields:    Translation:HumansAnimals
  126. Finkelstein JA, Lozano P, Fuhlbrigge AL, Carey VJ, Inui TS, Soumerai SB, Sullivan SD, Wagner EH, Weiss ST, Weiss KB. Practice-level effects of interventions to improve asthma care in primary care settings: the Pediatric Asthma Care Patient Outcomes Research Team. Health Serv Res. 2005 Dec; 40(6 Pt 1):1737-57. PMID: 16336546.
    Citations: 9     Fields:    Translation:Humans
  127. Appel LJ, Sacks FM, Carey VJ, Obarzanek E, Swain JF, Miller ER, Conlin PR, Erlinger TP, Rosner BA, Laranjo NM, Charleston J, McCarron P, Bishop LM. Effects of protein, monounsaturated fat, and carbohydrate intake on blood pressure and serum lipids: results of the OmniHeart randomized trial. JAMA. 2005 Nov 16; 294(19):2455-64. PMID: 16287956.
    Citations: 214     Fields:    Translation:Humans
  128. Gentleman RC, Carey VJ. Visualization and annotation of genomic experiments. Dunn MJ, Jorde LB, Little PFR, Subramaniam S, Editors. Encyclopedia of Genetics, Genomics, Proteomics and Bioinformatics. 2005.
  129. Cohen ND, Carey VJ, Donahue JG, Seahorn JL, Brown SE, Riddle TW. Temporality of early-term abortions associated with mare reproductive loss syndrome in horses. Am J Vet Res. 2005 Oct; 66(10):1792-7. PMID: 16273913.
    Citations:    Fields:    Translation:AnimalsPHPublic Health
  130. Bricker AL, Carey VJ, Wessels MR. Role of NADase in virulence in experimental invasive group A streptococcal infection. Infect Immun. 2005 Oct; 73(10):6562-6. PMID: 16177331.
    Citations: 25     Fields:    Translation:AnimalsCells
  131. Kovacs A, Montepiedra G, Carey V, Pahwa S, Weinberg A, Frenkel L, Capparelli E, Mofenson L, Smith E, McIntosh K, Burchett SK. Immune reconstitution after receipt of highly active antiretroviral therapy in children with advanced or progressive HIV disease and complete or partial viral load response. J Infect Dis. 2005 Jul 15; 192(2):296-302. PMID: 15962224.
    Citations: 10     Fields:    Translation:HumansCTClinical Trials
  132. Orimo A, Gupta PB, Sgroi DC, Arenzana-Seisdedos F, Delaunay T, Naeem R, Carey VJ, Richardson AL, Weinberg RA. Stromal fibroblasts present in invasive human breast carcinomas promote tumor growth and angiogenesis through elevated SDF-1/CXCL12 secretion. Cell. 2005 May 06; 121(3):335-48. PMID: 15882617.
    Citations: 1108     Fields:    Translation:HumansAnimalsCells
  133. Fuhlbrigge AL, Carey VJ, Finkelstein JA, Lozano P, Inui TS, Weiss ST, Weiss KB. Validity of the HEDIS criteria to identify children with persistent asthma and sustained high utilization. Am J Manag Care. 2005 May; 11(5):325-30. PMID: 15898221.
    Citations: 4     Fields:    Translation:Humans
  134. Carey VJ, Pahwa S, Weinberg A. Reliability of CD4 quantitation in human immunodeficiency virus-positive children: implications for definition of immunologic response to highly active antiretroviral therapy. Clin Diagn Lab Immunol. 2005 May; 12(5):640-3. PMID: 15879025.
    Citations: 2     Fields:    Translation:Humans
  135. Sullivan SD, Lee TA, Blough DK, Finkelstein JA, Lozano P, Inui TS, Fuhlbrigge AL, Carey VJ, Wagner E, Weiss KB. A multisite randomized trial of the effects of physician education and organizational change in chronic asthma care: cost-effectiveness analysis of the Pediatric Asthma Care Patient Outcomes Research Team II (PAC-PORT II). Arch Pediatr Adolesc Med. 2005 May; 159(5):428-34. PMID: 15867115.
    Citations: 14     Fields:    Translation:HumansCTClinical Trials
  136. Carey VJ, Gentleman RC, Huber W, Gentry J. Bioconductor software for graphs. Gentleman RC, Carey VJ, Huber W, Irizarry RA, Dudoit S, editors. Bioinformatics and Computational Biology Solutions Using R and Bioconductor. 2005; 347-68.
  137. Huber W, Gentleman RC, Carey VJ. Graphs. Gentleman RC, Carey VJ, Huber W, Irizarry RA, Dudoit S, editors. Bioinformatics and Computational Biology Solutions Using R and Bioconductor. 2005; 337-46.
  138. Carey VJ, Bishop L, Charleston J, Conlin P, Erlinger T, Laranjo N, McCarron P, Miller E, Rosner B, Swain J, Sacks FM, Appel LJ. Rationale and design of the Optimal Macro-Nutrient Intake Heart Trial to Prevent Heart Disease (OMNI-Heart). Clin Trials. 2005; 2(6):529-37. PMID: 16422313.
    Citations: 16     Fields:    Translation:Humans
  139. Carey VJ, Temple Lang D, Gentry J, Zhang J, Gentleman RC. Querying on-line resources. Gentleman RC, Carey VJ, Huber W, Irizarry RA, Dudoit S, editors. Bioinformatics and Computational Biology Solutions Using R and Bioconductor. 2005; 135-46.
  140. Gentleman RC, Carey VJ, Zhang J. Meta-data resources and tools in Bioconductor. Gentleman RC, Carey VJ, Huber W, Irizarry RA, Dudoit S, editors. Bioinformatics and Computational Biology Solutions Using R and Bioconductor. 2005; 111-34.
  141. Gentleman R, Scholtens D, Ding B, Carey VJ, Huber W. Case studies using graphs on biological data. Gentleman R, Carey VJ, Huber W, Irizarry RA, Dudoit S, editors. Bioinformatics and Computational Biology Solutions Using R and Bioconductor. 2005; 363-93.
  142. Gentleman RC, Carey VJ, Huber W, Irizarry RA, Dudoit S, editors. Bioinformatics and Computational Biology Solutions with R and Bioconductor. 2005.
  143. Carey VJ. Machine learning concepts and tools for statistical genomics. Gentleman RC, Carey VJ, Huber W, Irizarry RA, Dudoit S, editors. Bioinformatics and Computational Biology Solutions Using R and Bioconductor. 2005; 273-92.
  144. Hersh CP, DeMeo DL, Al-Ansari E, Carey VJ, Reilly JJ, Ginns LC, Silverman EK. Predictors of survival in severe, early onset COPD. Chest. 2004 Nov; 126(5):1443-51. PMID: 15539711.
    Citations: 18     Fields:    Translation:Humans
  145. Gentleman RC, Carey VJ, Bates DM, Bolstad B, Dettling M, Dudoit S, Ellis B, Gautier L, Ge Y, Gentry J, Hornik K, Hothorn T, Huber W, Iacus S, Irizarry R, Leisch F, Li C, Maechler M, Rossini AJ, Sawitzki G, Smith C, Smyth G, Tierney L, Yang JY, Zhang J. Bioconductor: open software development for computational biology and bioinformatics. Genome Biol. 2004; 5(10):R80. PMID: 15461798.
    Citations: 4901     Fields:    
  146. Lozano P, Finkelstein JA, Carey VJ, Wagner EH, Inui TS, Fuhlbrigge AL, Soumerai SB, Sullivan SD, Weiss ST, Weiss KB. A multisite randomized trial of the effects of physician education and organizational change in chronic-asthma care: health outcomes of the Pediatric Asthma Care Patient Outcomes Research Team II Study. Arch Pediatr Adolesc Med. 2004 Sep; 158(9):875-83. PMID: 15351753.
    Citations: 30     Fields:    Translation:HumansCTClinical Trials
  147. Carey VJ, Gentry J, Whalen E, Gentleman R. Network structures and algorithms in Bioconductor. Bioinformatics. 2005 Jan 01; 21(1):135-6. PMID: 15297301.
    Citations: 27     Fields:    Translation:Cells
  148. Durinck S, Allemeersch J, Carey VJ, Moreau Y, De Moor B. Importing MAGE-ML format microarray data into BioConductor. Bioinformatics. 2004 Dec 12; 20(18):3641-2. PMID: 15256416.
    Citations: 6     Fields:    
  149. Weinberg A, Pahwa S, Oyomopito R, Carey VJ, Zimmer B, Mofenson L, Kovacs A, Burchett SK. Antimicrobial-specific cell-mediated immune reconstitution in children with advanced human immunodeficiency virus infection receiving highly active antiretroviral therapy. Clin Infect Dis. 2004 Jul 01; 39(1):107-14. PMID: 15206061.
    Citations: 7     Fields:    Translation:HumansAnimalsCells
  150. Tang ML, Tang NS, Carey VJ. Confidence interval for rate ratio in a 2 x 2 table with structural zero: an application in assessing false-negative rate ratio when combining two diagnostic tests. Biometrics. 2004 Jun; 60(2):550-5; discussion 555. PMID: 15180684.
    Citations:    Fields:    Translation:Humans
  151. Fuhlbrigge A, Carey VJ, Adams RJ, Finkelstein JA, Lozano P, Weiss ST, Weiss KB. Evaluation of asthma prescription measures and health system performance based on emergency department utilization. Med Care. 2004 May; 42(5):465-71. PMID: 15083107.
    Citations: 6     Fields:    Translation:Humans
  152. DeMeo DL, Carey VJ, Chapman HA, Reilly JJ, Ginns LC, Speizer FE, Weiss ST, Silverman EK. Familial aggregation of FEF(25-75) and FEF(25-75)/FVC in families with severe, early onset COPD. Thorax. 2004 May; 59(5):396-400. PMID: 15115866.
    Citations: 17     Fields:    Translation:Humans
  153. Carey VJ, Yong FH, Frenkel LM, McKinney RM. Growth velocity assessment in paediatric AIDS: smoothing, penalized quantile regression and the definition of growth failure. Stat Med. 2004 Feb 15; 23(3):509-26. PMID: 14748042.
    Citations: 4     Fields:    Translation:Humans
  154. Krueger WA, Krueger-Rameck S, Koch S, Carey V, Pier GB, Huebner J. Assessment of the role of antibiotics and enterococcal virulence factors in a mouse model of extraintestinal translocation. Crit Care Med. 2004 Feb; 32(2):467-71. PMID: 14758165.
    Citations: 3     Fields:    Translation:AnimalsCells
  155. Jess Mar, Robert Gentleman, Vince Carey. MLInterfaces: Interfaces to R machine learning procedures for high-throughput data structures. 2004.
  156. Wang YG, Carey VJ. Unbiased estimating equations from working correlation models for irregularly timed repeated measures. J Amer Stat Assoc. 2004; 99:845-53.
  157. Seahorn JL, Slovis NM, Reimer JM, Carey VJ, Donahue JG, Cohen ND. Case-control study of factors associated with fibrinous pericarditis among horses in central Kentucky during spring 2001. J Am Vet Med Assoc. 2003 Sep 15; 223(6):832-8. PMID: 14507101.
    Citations:    Fields:    Translation:AnimalsPHPublic Health
  158. Cohen ND, Carey VJ, Donahue JG, Seahorn JL, Harrison LR. Descriptive epidemiology of late-term abortions associated with the mare reproductive loss syndrome in central Kentucky. J Vet Diagn Invest. 2003 May; 15(3):295-7. PMID: 12735356.
    Citations:    Fields:    Translation:AnimalsCells
  159. Stewart SA, Ben-Porath I, Carey VJ, O'Connor BF, Hahn WC, Weinberg RA. Erosion of the telomeric single-strand overhang at replicative senescence. Nat Genet. 2003 Apr; 33(4):492-6. PMID: 12652299.
    Citations: 52     Fields:    Translation:HumansCells
  160. Coleman FT, Mueschenborn S, Meluleni G, Ray C, Carey VJ, Vargas SO, Cannon CL, Ausubel FM, Pier GB. Hypersusceptibility of cystic fibrosis mice to chronic Pseudomonas aeruginosa oropharyngeal colonization and lung infection. Proc Natl Acad Sci U S A. 2003 Feb 18; 100(4):1949-54. PMID: 12578988.
    Citations: 36     Fields:    Translation:AnimalsCells
  161. Cohen ND, Donahue JG, Carey VJ, Seahorn JL, Piercy D, Donahoe JK, Williams DM, Brown SE, Riddle TW. Case-control study of early-term abortions (early fetal losses) associated with mare reproductive loss syndrome in central Kentucky. J Am Vet Med Assoc. 2003 Jan 15; 222(2):210-7. PMID: 12555985.
    Citations:    Fields:    Translation:Animals
  162. Cohen ND, Carey VJ, Donahue JG, Seahorn JL, Donahoe JK, Williams DM, Harrison LR. Case-control study of late-term abortions associated with mare reproductive loss syndrome in central Kentucky. J Am Vet Med Assoc. 2003 Jan 15; 222(2):199-209. PMID: 12555984.
    Citations:    Fields:    Translation:Animals
  163. Gentleman RC, Carey VJ. Bioconductor: software and development strategies for statistical genomics. Parmigiani G, Garrett E, Irizarry R, Zeger S, editors. The analysis of gene expression data: Methods and software. 2003; 46-72.
  164. Carey VJ. Ontology concepts and tools for statistical genomics. J Multivariate Analysis. 2003; 90:213-28.
  165. Zhang J, Carey V, Gentleman R. An extensible application for assembling annotation for genomic data. Bioinformatics. 2003 Jan; 19(1):155-6. PMID: 12499308.
    Citations: 14     Fields:    
  166. Wang YG, Carey VJ. Working correlation structure misspecification, estimation and covariate design: implications for GEE performance. Biometrika. 2003; 90:29-42.
  167. Gaughan DM, Hughes MD, Seage GR, Selwyn PA, Carey VJ, Gortmaker SL, Oleske JM. The prevalence of pain in pediatric human immunodeficiency virus/acquired immunodeficiency syndrome as reported by participants in the Pediatric Late Outcomes Study (PACTG 219). Pediatrics. 2002 Jun; 109(6):1144-52. PMID: 12042556.
    Citations: 3     Fields:    Translation:Humans
  168. Donahue JG, Chan KA, Andrade SE, Beck A, Boles M, Buist DS, Carey VJ, Chandler JM, Chase GA, Ettinger B, Fishman P, Goodman M, Guess HA, Gurwitz JH, LaCroix AZ, Levin TR, Platt R. Gastric and duodenal safety of daily alendronate. Arch Intern Med. 2002 Apr 22; 162(8):936-42. PMID: 11966346.
    Citations: 15     Fields:    Translation:Humans
  169. Tishler PV, Carey VJ, Reed T, Fabsitz RR. The role of genotype in determining the effects of cigarette smoking on pulmonary function. Genet Epidemiol. 2002 Mar; 22(3):272-82. PMID: 11921087.
    Citations: 2     Fields:    Translation:Humans
  170. van Breukelen F, Carey V. Ubiquitin conjugate dynamics in the gut and liver of hibernating ground squirrels. J Comp Physiol B. 2002 Apr; 172(3):269-73. PMID: 11919708.
    Citations: 10     Fields:    Translation:Animals
  171. Wright RJ, Cohen S, Carey V, Weiss ST, Gold DR. Parental stress as a predictor of wheezing in infancy: a prospective birth-cohort study. Am J Respir Crit Care Med. 2002 Feb 01; 165(3):358-65. PMID: 11818321.
    Citations: 73     Fields:    Translation:Humans
  172. Naugler WE, Yong FH, Carey VJ, Dragavon JA, Coombs RW, Frenkel LM. T69D/N pol mutation, human immunodeficiency virus type 1 RNA levels, and syncytium-inducing phenotype are associated with CD4 cell depletion during didanosine therapy. J Infect Dis. 2002 Feb 15; 185(4):448-55. PMID: 11865396.
    Citations: 1     Fields:    Translation:HumansCells
  173. R. Gentleman, V. Carey, M. Morgan, S. Falcon. Biobase: foundational structures and functions for Bioconductor. 2002.
  174. Puopolo KM, Hollingshead SK, Carey VJ, Madoff LC. Tandem repeat deletion in the alpha C protein of group B streptococcus is recA independent. Infect Immun. 2001 Aug; 69(8):5037-45. PMID: 11447184.
    Citations: 7     Fields:    Translation:AnimalsCells
  175. Coyne MJ, Tzianabos AO, Mallory BC, Carey VJ, Kasper DL, Comstock LE. Polysaccharide biosynthesis locus required for virulence of Bacteroides fragilis. Infect Immun. 2001 Jul; 69(7):4342-50. PMID: 11401972.
    Citations: 36     Fields:    Translation:AnimalsCells
  176. Carey VJ, Baker CJ, Platt R. Bayesian inference on protective antibody levels using case-control data. Biometrics. 2001 Mar; 57(1):135-42. PMID: 11252588.
    Citations: 2     Fields:    Translation:HumansPHPublic Health
  177. Carey VJ, Rosner BA. Analysis of longitudinally observed irregularly timed multivariate outcomes: regression with focus on cross-component correlation. Stat Med. 2001 Jan 15; 20(1):21-31. PMID: 11135345.
    Citations: 4     Fields:    Translation:Humans
  178. Carey VJ. GEE solvers: case studies in DSC design and implementation. Proceedings of the 2d International Workshop on Distributed Statistical Computing. 2001; 1-14.
  179. Litonjua AA, Carey VJ, Burge HA, Weiss ST, Gold DR. Exposure to cockroach allergen in the home is associated with incident doctor-diagnosed asthma and recurrent wheezing. J Allergy Clin Immunol. 2001 Jan; 107(1):41-7. PMID: 11149989.
    Citations: 35     Fields:    Translation:HumansAnimalsPHPublic Health
  180. Carey VJ. Literate statistical programming: concepts and tools. Chance. 2001; 14:46-50.
  181. Silverman EK, Weiss ST, Drazen JM, Chapman HA, Carey V, Campbell EJ, Denish P, Silverman RA, Celedon JC, Reilly JJ, Ginns LC, Speizer FE. Gender-related differences in severe, early-onset chronic obstructive pulmonary disease. Am J Respir Crit Care Med. 2000 Dec; 162(6):2152-8. PMID: 11112130.
    Citations: 60     Fields:    Translation:Humans
  182. Baker CJ, Paoletti LC, Rench MA, Guttormsen HK, Carey VJ, Hickman ME, Kasper DL. Use of capsular polysaccharide-tetanus toxoid conjugate vaccine for type II group B Streptococcus in healthy women. J Infect Dis. 2000 Oct; 182(4):1129-38. PMID: 10979909.
    Citations: 16     Fields:    Translation:HumansCellsCTClinical Trials
  183. Stevens RC, Rodman JH, Yong FH, Carey V, Knupp CA, Frenkel LM. Effect of food and pharmacokinetic variability on didanosine systemic exposure in HIV-infected children. Pediatric AIDS Clinical Trials Group Protocol 144 Study Team. AIDS Res Hum Retroviruses. 2000 Mar 20; 16(5):415-21. PMID: 10772527.
    Citations: 10     Fields:    Translation:HumansCellsCTClinical Trials
  184. Kalka-Moll WM, Tzianabos AO, Wang Y, Carey VJ, Finberg RW, Onderdonk AB, Kasper DL. Effect of molecular size on the ability of zwitterionic polysaccharides to stimulate cellular immunity. J Immunol. 2000 Jan 15; 164(2):719-24. PMID: 10623815.
    Citations: 18     Fields:    Translation:HumansAnimalsCells
  185. Litonjua AA, Carey VJ, Weiss ST, Gold DR. Race, socioeconomic factors, and area of residence are associated with asthma prevalence. Pediatr Pulmonol. 1999 Dec; 28(6):394-401. PMID: 10587412.
    Citations: 55     Fields:    Translation:Humans
  186. Celedon JC, Speizer FE, Drazen JM, Weiss ST, Campbell EJ, Carey VJ, Reilly JJ, Ginns L, Silverman EK. Bronchodilator responsiveness and serum total IgE levels in families of probands with severe early-onset COPD. Eur Respir J. 1999 Nov; 14(5):1009-14. PMID: 10596682.
    Citations: 9     Fields:    Translation:Humans
  187. Cohen ND, Mundy GD, Peloso JG, Carey VJ, Amend NK. Results of physical inspection before races and race-related characteristics and their association with musculoskeletal injuries in Thoroughbreds during races. J Am Vet Med Assoc. 1999 Sep 01; 215(5):654-61. PMID: 10476712.
    Citations: 4     Fields:    Translation:Animals
  188. Gold DR, Burge HA, Carey V, Milton DK, Platts-Mills T, Weiss ST. Predictors of repeated wheeze in the first year of life: the relative roles of cockroach, birth weight, acute lower respiratory illness, and maternal smoking. Am J Respir Crit Care Med. 1999 Jul; 160(1):227-36. PMID: 10390405.
    Citations: 88     Fields:    Translation:HumansAnimalsPHPublic Health
  189. Carey VJ. An approach to heteroskedastic modeling. Statistical Modeling. 1999; 142-9.
  190. Rexrode KM, Carey VJ, Hennekens CH, Walters EE, Colditz GA, Stampfer MJ, Willett WC, Manson JE. Abdominal adiposity and coronary heart disease in women. JAMA. 1998 Dec 02; 280(21):1843-8. PMID: 9846779.
    Citations: 203     Fields:    Translation:Humans
  191. Thakker M, Park JS, Carey V, Lee JC. Staphylococcus aureus serotype 5 capsular polysaccharide is antiphagocytic and enhances bacterial virulence in a murine bacteremia model. Infect Immun. 1998 Nov; 66(11):5183-9. PMID: 9784520.
    Citations: 80     Fields:    Translation:HumansAnimalsCells
  192. Ashbaugh CD, Warren HB, Carey VJ, Wessels MR. Molecular analysis of the role of the group A streptococcal cysteine protease, hyaluronic acid capsule, and M protein in a murine model of human invasive soft-tissue infection. J Clin Invest. 1998 Aug 01; 102(3):550-60. PMID: 9691092.
    Citations: 77     Fields:    Translation:HumansAnimalsCells
  193. Carey VJ, Yong FH, Frenkel LM, McKinney RE. Pediatric AIDS prognosis using somatic growth velocity. AIDS. 1998 Jul 30; 12(11):1361-9. PMID: 9708417.
    Citations: 4     Fields:    Translation:Humans
  194. Litonjua AA, Carey VJ, Burge HA, Weiss ST, Gold DR. Parental history and the risk for childhood asthma. Does mother confer more risk than father? Am J Respir Crit Care Med. 1998 Jul; 158(1):176-81. PMID: 9655726.
    Citations: 90     Fields:    Translation:Humans
  195. Albert CM, Hennekens CH, O'Donnell CJ, Ajani UA, Carey VJ, Willett WC, Ruskin JN, Manson JE. Fish consumption and risk of sudden cardiac death. JAMA. 1998 Jan 07; 279(1):23-8. PMID: 9424039.
    Citations: 123     Fields:    Translation:Humans
  196. Gravekamp C, Kasper DL, Michel JL, Kling DE, Carey V, Madoff LC. Immunogenicity and protective efficacy of the alpha C protein of group B streptococci are inversely related to the number of repeats. Infect Immun. 1997 Dec; 65(12):5216-21. PMID: 9393818.
    Citations: 20     Fields:    Translation:AnimalsCells
  197. Beckett WS, Pace PA, Sferlazza SJ, Carey VJ, Weiss ST. Annual variability in methacholine responsiveness in nonasthmatic working adults. Eur Respir J. 1997 Nov; 10(11):2515-21. PMID: 9426088.
    Citations: 2     Fields:    Translation:HumansPHPublic Health
  198. Solomon CG, Willett WC, Carey VJ, Rich-Edwards J, Hunter DJ, Colditz GA, Stampfer MJ, Speizer FE, Spiegelman D, Manson JE. A prospective study of pregravid determinants of gestational diabetes mellitus. JAMA. 1997 Oct 01; 278(13):1078-83. PMID: 9315766.
    Citations: 157     Fields:    Translation:Humans
  199. Lee JC, Park JS, Shepherd SE, Carey V, Fattom A. Protective efficacy of antibodies to the Staphylococcus aureus type 5 capsular polysaccharide in a modified model of endocarditis in rats. Infect Immun. 1997 Oct; 65(10):4146-51. PMID: 9317020.
    Citations: 36     Fields:    Translation:AnimalsCells
  200. Carey VJ. Using hypertext and the Internet for structure and management of observational studies. Stat Med. 1997 Aug 15; 16(15):1667-82. PMID: 9265692.
    Citations: 3     Fields:    
  201. Carey VJ, Walters EE, Colditz GA, Solomon CG, Willett WC, Rosner BA, Speizer FE, Manson JE. Body fat distribution and risk of non-insulin-dependent diabetes mellitus in women. The Nurses' Health Study. Am J Epidemiol. 1997 Apr 01; 145(7):614-9. PMID: 9098178.
    Citations: 143     Fields:    Translation:Humans
  202. Kasper DL, Paoletti LC, Wessels MR, Guttormsen HK, Carey VJ, Jennings HJ, Baker CJ. Immune response to type III group B streptococcal polysaccharide-tetanus toxoid conjugate vaccine. J Clin Invest. 1996 Nov 15; 98(10):2308-14. PMID: 8941648.
    Citations: 54     Fields:    Translation:HumansAnimalsCellsCTClinical Trials
  203. Hanrahan JP, Brown RW, Carey VJ, Castile RG, Speizer FE, Tager IB. Passive respiratory mechanics in healthy infants. Effects of growth, gender, and smoking. Am J Respir Crit Care Med. 1996 Sep; 154(3 Pt 1):670-80. PMID: 8810604.
    Citations: 10     Fields:    Translation:HumansPHPublic Health
  204. David MM, Hanrahan JP, Carey V, Speizer FE, Tager IB. Respiratory symptoms in urban Hispanic and non-Hispanic white women. Am J Respir Crit Care Med. 1996 Apr; 153(4 Pt 1):1285-91. PMID: 8616555.
    Citations: 5     Fields:    Translation:Humans
  205. Carey VJ, Weiss ST, Tager IB, Leeder SR, Speizer FE. Airways responsiveness, wheeze onset, and recurrent asthma episodes in young adolescents. The East Boston Childhood Respiratory Disease Cohort. Am J Respir Crit Care Med. 1996 Jan; 153(1):356-61. PMID: 8542143.
    Citations: 4     Fields:    Translation:Humans
  206. Katz J, Carey VJ, Zeger SL, Sommer A. Estimation of design effects and diarrhea clustering within households and villages. Am J Epidemiol. 1993 Dec 01; 138(11):994-1006. PMID: 8256785.
    Citations: 14     Fields:    Translation:HumansPHPublic Health
  207. Galai N, Muñoz A, Chen K, Carey VJ, Chmiel J, Zhou SY. Tracking of markers and onset of disease among HIV-1 seroconverters. Stat Med. 1993 Nov 30; 12(22):2133-45. PMID: 7906051.
    Citations: 5     Fields:    Translation:HumansCells
  208. Carey V, Vimpani G, Taylor R. Childhood injury mortality in New South Wales: geographical and socio-economic variations. J Paediatr Child Health. 1993 Apr; 29(2):136-40. PMID: 8489794.
    Citations: 8     Fields:    Translation:Humans
  209. Wax Y, Galai N, Carey V, Simchen E. Cox regression models for intermediate events, with discharge from hospital as an example. Epidemiology. 1993 Mar; 4(2):120-7. PMID: 8452900.
    Citations: 1     Fields:    Translation:Humans
  210. Carey V, Zeger S, Diggle P. Modelling multivariate binary data with alternating logistic regressions. Biometrika. 1993; 80(3):517-526.
  211. Carey VJ. Regression analysis for large binary clusters. 1993.
  212. Hoover D, Munoz A, Carey V, Taylor J, Van Raden M, Chmiel J, Kingsley L. Using events from dropouts in nonparametric survival function estimation with application to incubation of AIDS. J Am Stat Assoc. 1993; 88:37-43.
  213. Muñoz A, Carey V, Schouten JP, Segal M, Rosner B. A parametric family of correlation structures for the analysis of longitudinal data. Biometrics. 1992 Sep; 48(3):733-42. PMID: 1420837.
    Citations: 13     Fields:    Translation:Humans
  214. Muñoz A, Carey V, Taylor JM, Chmiel JS, Kingsley L, Van Raden M, Hoover DR. Estimation of time since exposure for a prevalent cohort. Stat Med. 1992 May; 11(7):939-52. PMID: 1351308.
    Citations: 6     Fields:    Translation:HumansCells
  215. Carey V. S-plus and C routines for the solution of generalized estimating equations. 1992.
  216. Hoover DR, Muñoz A, Carey V, Odaka N, Taylor JM, Chmiel JS, Armstrong J, Vermund SH. The unseen sample in cohort studies: estimation of its size and effect. Multicenter AIDS Cohort Study. Stat Med. 1991 Dec; 10(12):1993-2003. PMID: 1805323.
    Citations: 9     Fields:    Translation:HumansCells
  217. Hoover DR, Muñoz A, Carey V, Chmiel JS, Taylor JM, Margolick JB, Kingsley L, Vermund SH. Estimating the 1978-1990 and future spread of human immunodeficiency virus type 1 in subgroups of homosexual men. Am J Epidemiol. 1991 Nov 15; 134(10):1190-205. PMID: 1746529.
    Citations: 5     Fields:    Translation:HumansCTClinical Trials
  218. Margolick JB, Carey V, Muñoz A, Polk BF, Giorgi JV, Bauer KD, Kaslow R, Rinaldo C. Development of antibodies to HIV-1 is associated with an increase in circulating CD3+CD4-CD8- lymphocytes. Clin Immunol Immunopathol. 1989 Jun; 51(3):348-61. PMID: 2785883.
    Citations: 6     Fields:    Translation:HumansCells
  219. Muñoz A, Carey V, Saah AJ, Phair JP, Kingsley LA, Fahey JL, Ginzburg HM, Polk BF. Predictors of decline in CD4 lymphocytes in a cohort of homosexual men infected with human immunodeficiency virus. J Acquir Immune Defic Syndr (1988). 1988; 1(4):396-404. PMID: 2905743.
    Citations: 13     Fields:    Translation:HumansCellsCTClinical Trials
  220. Muñoz A, Rosner B, Carey V. Regression analysis in the presence of heterogeneous intraclass correlations. Biometrics. 1986 Sep; 42(3):653-8. PMID: 3567298.
    Citations: 3     Fields:    Translation:Humans
  221. Tager IB, Muñoz A, Rosner B, Weiss ST, Carey V, Speizer FE. Effect of cigarette smoking on the pulmonary function of children and adolescents. Am Rev Respir Dis. 1985 May; 131(5):752-9. PMID: 4003920.
    Citations: 8     Fields:    Translation:Humans