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Pavel Ivanov, Ph.D.

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Research
The research activities and funding listed below are automatically derived from NIH ExPORTER and other sources, which might result in incorrect or missing items. Faculty can login to make corrections and additions.
  1. R01GM126150 (IVANOV, PAVEL) Feb 1, 2019 - Jan 31, 2024
    NIH/NIGMS
    Biology of RNA G-quadruplexes
    Role: Principal Investigator
  2. R21NS094918 (IVANOV, PAVEL) Sep 15, 2015 - Aug 31, 2017
    NIH/NINDS
    G-quadruplex Structures as Targets and Tools in ALS
    Role: Principal Investigator

Bibliographic
Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
  1. Demina TS, Birdibekova AV, Svidchenko EA, Ivanov PL, Kuryanova AS, Kurkin TS, Khaibullin ZI, Goncharuk GP, Zharikova TM, Bhuniya S, Grandfils C, Timashev PS, Akopova TA. Solid-State Synthesis of Water-Soluble Chitosan-g-Hydroxyethyl Cellulose Copolymers. Polymers (Basel). 2020 Mar 07; 12(3). PMID: 32156039.
    Citations:    
  2. Akiyama Y, Kharel P, Abe T, Anderson P, Ivanov P. Isolation and initial structure-functional characterization of endogenous tRNA-derived stress-induced RNAs. RNA Biol. 2020 Mar 01; 1-9. PMID: 32116132.
    Citations:    
  3. Kedersha N, Panas MD, Achorn CA, Lyons S, Tisdale S, Hickman T, Thomas M, Lieberman J, McInerney GM, Ivanov P, Anderson P. Correction: G3BP-Caprin1-USP10 complexes mediate stress granule condensation and associate with 40S subunits. J Cell Biol. 2020 01 06; 219(1). PMID: 31851327.
    Citations:    
  4. Panas MD, Kedersha N, Schulte T, Branca RM, Ivanov P, Anderson P. Phosphorylation of G3BP1-S149 does not influence stress granule assembly. J Cell Biol. 2019 Jul 01; 218(7):2425-2432. PMID: 31171631.
    Citations:    
  5. Advani VM, Ivanov P. Translational Control under Stress: Reshaping the Translatome. Bioessays. 2019 05; 41(5):e1900009. PMID: 31026340.
    Citations:    
  6. Ivanov P, Kedersha N, Anderson P. Stress Granules and Processing Bodies in Translational Control. Cold Spring Harb Perspect Biol. 2019 05 01; 11(5). PMID: 30082464.
    Citations:    Fields:    
  7. Kulikov EE, Golomidova AK, Prokhorov NS, Ivanov PA, Letarov AV. High-throughput LPS profiling as a tool for revealing of bacteriophage infection strategies. Sci Rep. 2019 02 27; 9(1):2958. PMID: 30814597.
    Citations:    
  8. Golomidova AK, Kulikov EE, Babenko VV, Ivanov PA, Prokhorov NS, Letarov AV. Escherichia coli bacteriophage Gostya9, representing a new species within the genus T5virus. Arch Virol. 2019 Mar; 164(3):879-884. PMID: 30506471.
    Citations:    
  9. Knirel YA, Ivanov PA, Senchenkova SN, Naumenko OI, Ovchinnikova OO, Shashkov AS, Golomidova AK, Babenko VV, Kulikov EE, Letarov AV. Structure and gene cluster of the O antigen of Escherichia coli F17, a candidate for a new O-serogroup. Int J Biol Macromol. 2019 Mar 01; 124:389-395. PMID: 30448500.
    Citations:    Fields:    
  10. Aulas A, Lyons SM, Fay MM, Anderson P, Ivanov P. Nitric oxide triggers the assembly of "type II" stress granules linked to decreased cell viability. Cell Death Dis. 2018 11 13; 9(11):1129. PMID: 30425239.
    Citations:    Fields:    
  11. Lomakina NF, Sadykova GK, Timofeeva TA, Rudneva IA, Boravleva EY, Ivanov PA, Prilipov AG, Gambaryan AS. [Three Mutations in the Stalk Region of Hemagglutinin Affect the pH of Fusion and Pathogenicity of H5N1 Influenza Virus]. Mol Biol (Mosk). 2018 Nov-Dec; 52(6):1029-1037. PMID: 30633245.
    Citations:    Fields:    
  12. Lyons SM, Fay MM, Ivanov P. The role of RNA modifications in the regulation of tRNA cleavage. FEBS Lett. 2018 09; 592(17):2828-2844. PMID: 30058219.
    Citations:    Fields:    
  13. Fay MM, Anderson PJ, Ivanov P. ALS/FTD-Associated C9ORF72 Repeat RNA Promotes Phase Transitions In Vitro and in Cells. Cell Rep. 2017 Dec 19; 21(12):3573-3584. PMID: 29262335.
    Citations: 5     Fields:    Translation:HumansAnimalsCells
  14. Lyons SM, Gudanis D, Coyne SM, Gdaniec Z, Ivanov P. Author Correction: Identification of functional tetramolecular RNA G-quadruplexes derived from transfer RNAs. Nat Commun. 2017 12 05; 8(1):2020. PMID: 29209051.
    Citations:    Fields:    
  15. Lyons SM, Gudanis D, Coyne SM, Gdaniec Z, Ivanov P. Identification of functional tetramolecular RNA G-quadruplexes derived from transfer RNAs. Nat Commun. 2017 10 24; 8(1):1127. PMID: 29066746.
    Citations: 5     Fields:    Translation:HumansAnimalsCells
  16. Fay MM, Lyons SM, Ivanov P. RNA G-Quadruplexes in Biology: Principles and Molecular Mechanisms. J Mol Biol. 2017 07 07; 429(14):2127-2147. PMID: 28554731.
    Citations: 11     Fields:    Translation:Cells
  17. Aulas A, Fay MM, Szaflarski W, Kedersha N, Anderson P, Ivanov P. Methods to Classify Cytoplasmic Foci as Mammalian Stress Granules. J Vis Exp. 2017 05 12; (123). PMID: 28570526.
    Citations: 3     Fields:    Translation:HumansCells
  18. Lyons SM, Fay MM, Akiyama Y, Anderson PJ, Ivanov P. RNA biology of angiogenin: Current state and perspectives. RNA Biol. 2017 02; 14(2):171-178. PMID: 28010172.
    Citations: 9     Fields:    Translation:HumansAnimalsCells
  19. Aulas A, Fay MM, Lyons SM, Achorn CA, Kedersha N, Anderson P, Ivanov P. Stress-specific differences in assembly and composition of stress granules and related foci. J Cell Sci. 2017 03 01; 130(5):927-937. PMID: 28096475.
    Citations: 11     Fields:    Translation:HumansAnimalsCells
  20. Panas MD, Ivanov P, Anderson P. Mechanistic insights into mammalian stress granule dynamics. J Cell Biol. 2016 Nov 07; 215(3):313-323. PMID: 27821493.
    Citations: 30     Fields:    Translation:HumansAnimalsCells
  21. Nikonenko BV, Kornienko A, Majorov K, Ivanov P, Kondratieva T, Korotetskaya M, Apt AS, Salina E, Velezheva V. In Vitro Activity of 3-Triazeneindoles against Mycobacterium tuberculosis and Mycobacterium avium. Antimicrob Agents Chemother. 2016 10; 60(10):6422-4. PMID: 27503657.
    Citations:    Fields:    Translation:HumansCells
  22. Mineo M, Ricklefs F, Rooj AK, Lyons SM, Ivanov P, Ansari KI, Nakano I, Chiocca EA, Godlewski J, Bronisz A. The Long Non-coding RNA HIF1A-AS2 Facilitates the Maintenance of Mesenchymal Glioblastoma Stem-like Cells in Hypoxic Niches. Cell Rep. 2016 06 14; 15(11):2500-9. PMID: 27264189.
    Citations: 19     Fields:    Translation:HumansCells
  23. Szaflarski W, Fay MM, Kedersha N, Zabel M, Anderson P, Ivanov P. Vinca alkaloid drugs promote stress-induced translational repression and stress granule formation. Oncotarget. 2016 May 24; 7(21):30307-22. PMID: 27083003.
    Citations: 4     Fields:    Translation:HumansAnimalsCells
  24. Lyons SM, Achorn C, Kedersha NL, Anderson PJ, Ivanov P. YB-1 regulates tiRNA-induced Stress Granule formation but not translational repression. Nucleic Acids Res. 2016 08 19; 44(14):6949-60. PMID: 27174937.
    Citations: 17     Fields:    Translation:HumansCells
  25. Kedersha N, Panas MD, Achorn CA, Lyons S, Tisdale S, Hickman T, Thomas M, Lieberman J, McInerney GM, Ivanov P, Anderson P. G3BP-Caprin1-USP10 complexes mediate stress granule condensation and associate with 40S subunits. J Cell Biol. 2016 Mar 28; 212(7):845-60. PMID: 27022092.
    Citations: 44     Fields:    Translation:HumansAnimalsCells
  26. Velezheva V, Brennan P, Ivanov P, Kornienko A, Lyubimov S, Kazarian K, Nikonenko B, Majorov K, Apt A. Synthesis and antituberculosis activity of indole-pyridine derived hydrazides, hydrazide-hydrazones, and thiosemicarbazones. Bioorg Med Chem Lett. 2016 Feb 01; 26(3):978-985. PMID: 26725953.
    Citations: 5     Fields:    Translation:Cells
  27. Ivanov P. Emerging Roles of tRNA-derived Fragments in Viral Infections: The Case of Respiratory Syncytial Virus. Mol Ther. 2015 Oct; 23(10):1557-8. PMID: 26442802.
    Citations: 1     Fields:    Translation:HumansCells
  28. Ermolov AS, Blagovestnov DA, Ivanov PA, Grishin AV, Titova GP, Agakhanova KT. [Surgery of pancreatic injuries]. Khirurgiia (Mosk). 2015; (10):9-15. PMID: 26978463.
    Citations:    Fields:    
  29. Anderson P, Kedersha N, Ivanov P. Stress granules, P-bodies and cancer. Biochim Biophys Acta. 2015 Jul; 1849(7):861-70. PMID: 25482014.
    Citations: 56     Fields:    Translation:HumansAnimalsCells
  30. Ivanov P, O'Day E, Emara MM, Wagner G, Lieberman J, Anderson P. G-quadruplex structures contribute to the neuroprotective effects of angiogenin-induced tRNA fragments. Proc Natl Acad Sci U S A. 2014 Dec 23; 111(51):18201-6. PMID: 25404306.
    Citations: 44     Fields:    Translation:HumansCells
  31. Anderson P, Ivanov P. tRNA fragments in human health and disease. FEBS Lett. 2014 Nov 28; 588(23):4297-304. PMID: 25220675.
    Citations: 65     Fields:    Translation:HumansAnimalsCells
  32. Ivanov P, Anderson P. Alternative translation initiation in immunity: MAVS learns new tricks. Trends Immunol. 2014 May; 35(5):188-9. PMID: 24685172.
    Citations:    Fields:    Translation:HumansAnimalsCells
  33. Kedersha N, Ivanov P, Anderson P. Stress granules and cell signaling: more than just a passing phase? Trends Biochem Sci. 2013 Oct; 38(10):494-506. PMID: 24029419.
    Citations: 120     Fields:    Translation:HumansAnimalsCells
  34. Szaflarski W, Sujka-Kordowska P, Pula B, Jaszczynska-Nowinka K, Andrzejewska M, Zawierucha P, Dziegiel P, Nowicki M, Ivanov P, Zabel M. Expression profiles of vault components MVP, TEP1 and vPARP and their correlation to other multidrug resistance proteins in ovarian cancer. Int J Oncol. 2013 Aug; 43(2):513-20. PMID: 23739867.
    Citations: 2     Fields:    Translation:HumansCells
  35. Ivanov P, Anderson P. Post-transcriptional regulatory networks in immunity. Immunol Rev. 2013 May; 253(1):253-72. PMID: 23550651.
    Citations: 34     Fields:    Translation:HumansAnimalsCells
  36. Li W, Ivanov P, Anderson P. Fas-activated Ser/Thr phosphoprotein (FAST) is a eukaryotic initiation factor 4E-binding protein that regulates mRNA stability and cell survival. Translation (Austin). 2013; 1(1):e24047. PMID: 26824015.
    Citations:    
  37. Grousl T, Ivanov P, Malcova I, Pompach P, Frydlova I, Slaba R, Senohrabkova L, Novakova L, Hasek J. Heat shock-induced accumulation of translation elongation and termination factors precedes assembly of stress granules in S. cerevisiae. PLoS One. 2013; 8(2):e57083. PMID: 23451152.
    Citations: 16     Fields:    Translation:AnimalsCells
  38. Chudinova EM, Nadezhdina ES, Ivanov PA. Cellular acidosis inhibits assembly, disassembly, and motility of stress granules. Biochemistry (Mosc). 2012 Nov; 77(11):1277-84. PMID: 23240565.
    Citations: 1     Fields:    Translation:HumansCells
  39. Saikia M, Krokowski D, Guan BJ, Ivanov P, Parisien M, Hu GF, Anderson P, Pan T, Hatzoglou M. Genome-wide identification and quantitative analysis of cleaved tRNA fragments induced by cellular stress. J Biol Chem. 2012 Dec 14; 287(51):42708-25. PMID: 23086926.
    Citations: 65     Fields:    Translation:AnimalsCells
  40. Emara MM, Fujimura K, Sciaranghella D, Ivanova V, Ivanov P, Anderson P. Hydrogen peroxide induces stress granule formation independent of eIF2a phosphorylation. Biochem Biophys Res Commun. 2012 Jul 13; 423(4):763-9. PMID: 22705549.
    Citations: 28     Fields:    Translation:HumansAnimalsCells
  41. Ramrath DJ, Yamamoto H, Rother K, Wittek D, Pech M, Mielke T, Loerke J, Scheerer P, Ivanov P, Teraoka Y, Shpanchenko O, Nierhaus KH, Spahn CM. The complex of tmRNA-SmpB and EF-G on translocating ribosomes. Nature. 2012 May 06; 485(7399):526-9. PMID: 22622583.
    Citations: 33     Fields:    Translation:Cells
  42. Ivanov P, Kedersha N, Anderson P. Stress puts TIA on TOP. Genes Dev. 2011 Oct 15; 25(20):2119-24. PMID: 22012617.
    Citations: 16     Fields:    Translation:HumansCells
  43. Ivanov P, Emara MM, Villen J, Gygi SP, Anderson P. Angiogenin-induced tRNA fragments inhibit translation initiation. Mol Cell. 2011 Aug 19; 43(4):613-23. PMID: 21855800.
    Citations: 202     Fields:    Translation:HumansCells
  44. Fesenko DO, Ivanov PL, Kornienko AE, Zemskova EIu, Zasedatelev AS, Nasedkina TV. [Optimization of the biological microchip for genotyping the AB0 locus: analytical aspects]. Sud Med Ekspert. 2011 Mar-Apr; 54(2):30-3. PMID: 21735714.
    Citations:    Fields:    Translation:Humans
  45. Ivanov PL, Fesenko DO, Kornienko AE, Roi OV, Zemskova EIu, Zasedatelev AS, Nasedkina TV. [Optimization of the biological microchip for genotyping of the AB0 locus: correction of DNA probes]. Sud Med Ekspert. 2011 Jan-Feb; 54(1):32-5. PMID: 21516808.
    Citations:    Fields:    Translation:Humans
  46. Ivanov P, Anderson P. CBP80 choreographs the NMD two-step. Mol Cell. 2010 Aug 13; 39(3):317-8. PMID: 20705234.
    Citations:    Fields:    
  47. Li CH, Ohn T, Ivanov P, Tisdale S, Anderson P. eIF5A promotes translation elongation, polysome disassembly and stress granule assembly. PLoS One. 2010 Apr 01; 5(4):e9942. PMID: 20376341.
    Citations: 39     Fields:    Translation:HumansCells
  48. Emara MM, Ivanov P, Hickman T, Dawra N, Tisdale S, Kedersha N, Hu GF, Anderson P. Angiogenin-induced tRNA-derived stress-induced RNAs promote stress-induced stress granule assembly. J Biol Chem. 2010 Apr 02; 285(14):10959-68. PMID: 20129916.
    Citations: 139     Fields:    Translation:HumansCells
  49. Grousl T, Ivanov P, Frýdlová I, Vasicová P, Janda F, Vojtová J, Malínská K, Malcová I, Nováková L, Janosková D, Valásek L, Hasek J. Robust heat shock induces eIF2alpha-phosphorylation-independent assembly of stress granules containing eIF3 and 40S ribosomal subunits in budding yeast, Saccharomyces cerevisiae. J Cell Sci. 2009 Jun 15; 122(Pt 12):2078-88. PMID: 19470581.
    Citations: 81     Fields:    Translation:AnimalsCells
  50. Yamasaki S, Ivanov P, Hu GF, Anderson P. Angiogenin cleaves tRNA and promotes stress-induced translational repression. J Cell Biol. 2009 Apr 06; 185(1):35-42. PMID: 19332886.
    Citations: 213     Fields:    Translation:HumansCells
  51. Ajamian L, Abrahamyan L, Milev M, Ivanov PV, Kulozik AE, Gehring NH, Mouland AJ. Unexpected roles for UPF1 in HIV-1 RNA metabolism and translation. RNA. 2008 May; 14(5):914-27. PMID: 18369187.
    Citations: 44     Fields:    Translation:HumansCells
  52. Ivanov PV, Gehring NH, Kunz JB, Hentze MW, Kulozik AE. Interactions between UPF1, eRFs, PABP and the exon junction complex suggest an integrated model for mammalian NMD pathways. EMBO J. 2008 Mar 05; 27(5):736-47. PMID: 18256688.
    Citations: 132     Fields:    Translation:HumansCells
  53. Shpanchenko OV, Zvereva MI, Ivanov PV, Bugaeva EY, Rozov AS, Bogdanov AA, Kalkum M, Isaksson LA, Nierhaus KH, Dontsova OA. Stepping transfer messenger RNA through the ribosome. J Biol Chem. 2005 May 06; 280(18):18368-74. PMID: 15713678.
    Citations: 13     Fields:    Translation:Cells
  54. Shpachenko OV, Ivanov PV, Zverev ME, Bogdanov AA, Dontsov OA. [Trans-translation: main participants and role in the cell life]. Mol Biol (Mosk). 2004 Sep-Oct; 38(5):914-25. PMID: 15554193.
    Citations:    Fields:    Translation:Cells
  55. Ivanov PA, Chudinova EM, Nadezhdina ES. RNP stress-granule formation is inhibited by microtubule disruption. Cell Biol Int. 2003; 27(3):207-8. PMID: 12681309.
    Citations: 7     Fields:    Translation:AnimalsCells
  56. Ivanov PV, Zvereva MI, Shpanchenko OV, Dontsova OA, Bogdanov AA, Aglyamova GV, Lim VI, Teraoka Y, Nierhaus KH. How does tmRNA move through the ribosome? FEBS Lett. 2002 Mar 06; 514(1):55-9. PMID: 11904181.
    Citations: 7     Fields:    Translation:Cells
  57. Wilson DN, Blaha G, Connell SR, Ivanov PV, Jenke H, Stelzl U, Teraoka Y, Nierhaus KH. Protein synthesis at atomic resolution: mechanistics of translation in the light of highly resolved structures for the ribosome. Curr Protein Pept Sci. 2002 Feb; 3(1):1-53. PMID: 12370010.
    Citations: 18     Fields:    Translation:Cells
  58. Zvereva MI, Ivanov PV, Teraoka Y, Topilina NI, Dontsova OA, Bogdanov AA, Kalkum M, Nierhaus KH, Shpanchenko OV. Complex of transfer-messenger RNA and elongation factor Tu. Unexpected modes of interaction. J Biol Chem. 2001 Dec 14; 276(50):47702-8. PMID: 11595738.
    Citations: 7     Fields:    Translation:Cells
  59. Akimkina T, Ivanov P, Kostrov S, Sokolova T, Bonch-Osmolovskaya E, Firman K, Dutta CF, McClellan JA. A highly conserved plasmid from the extreme thermophile Thermotoga maritima MC24 is a member of a family of plasmids distributed worldwide. Plasmid. 1999 Nov; 42(3):236-40. PMID: 10545265.
    Citations: 5     Fields:    Translation:Cells
  60. Orekhov V, Poltoraus A, Zhivotovsky LA, Spitsyn V, Ivanov P, Yankovsky N. Mitochondrial DNA sequence diversity in Russians. FEBS Lett. 1999 Feb 19; 445(1):197-201. PMID: 10069400.
    Citations: 10     Fields:    Translation:HumansCells
  61. Ivanov PL, Wadhams MJ, Roby RK, Holland MM, Weedn VW, Parsons TJ. Mitochondrial DNA sequence heteroplasmy in the Grand Duke of Russia Georgij Romanov establishes the authenticity of the remains of Tsar Nicholas II. Nat Genet. 1996 Apr; 12(4):417-20. PMID: 8630496.
    Citations: 45     Fields:    Translation:HumansCells
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Funded by the NIH National Center for Advancing Translational Sciences through its Clinical and Translational Science Awards Program, grant number UL1TR002541.