Harvard Catalyst Profiles

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Peter Szolovits, Ph.D.

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Research
research activities and funding
The research activities and funding listed below are automatically derived from NIH ExPORTER and other sources, which might result in incorrect or missing items. Faculty can login to make corrections and additions.
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  1. R01LM009723 (SZOLOVITS, PETER) Sep 30, 2008 - Sep 29, 2012
    NIH
    Capturing Patient-Provider Encounter through Text Speech and Dialogue Processing
    Role: Principal Investigator
  2. U54LM008748 (KOHANE, ISAAC S.) Sep 15, 2004 - Sep 14, 2014
    NIH/NLM
    Informatics for Integrating Biology &the Bedside (i2b2)
    Role: Co-Principal Investigator
  3. R01LM005296 (SZOLOVITS, PETER) Sep 30, 1993 - Sep 29, 1997
    NIH
    CLINICAL GENETICIST'S WORKSTATION
    Role: Principal Investigator
  4. R01LM004493 (SZOLOVITS, PETER) Sep 30, 1985 - Sep 29, 1994
    NIH
    ARTIFICIAL INTELLIGENCE CLINICAL DECISION MAKING
    Role: Principal Investigator
  5. R01HL033041 (LONG, WILLIAM J.) Apr 1, 1984 - Jul 31, 1998
    NIH
    ARTIFICIAL INTELLIGENCE CARDIOVASCULAR REASONING
    Role: Co-Principal Investigator

Bibliographic
selected publications
Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
  1. McDermott M, Dighe A, Szolovits P, Luo Y, Baron J. Using Machine Learning to Develop Smart Reflex Testing Protocols. ArXiv. 2023 Feb 01. PMID: 36776825; PMCID: PMC9915755.
    Citations:    
  2. McDermott MBA, Nestor B, Szolovits P. Clinical Artificial Intelligence: Design Principles and Fallacies. Clin Lab Med. 2023 Mar; 43(1):29-46. PMID: 36764807.
    Citations:    Fields:    
  3. Yu JK, Marwaha JS, Kennedy CJ, Robinson KA, Fleishman A, Beaulieu-Jones BR, Bleicher J, Huang LC, Szolovits P, Brat GA. Who doesn't fit? A multi-institutional study using machine learning to uncover the limits of opioid prescribing guidelines. Surgery. 2022 08; 172(2):655-662. PMID: 35527053.
    Citations:    Fields:    Translation:Humans
  4. Jin D, Sergeeva E, Weng WH, Chauhan G, Szolovits P. Explainable deep learning in healthcare: A methodological survey from an attribution view. WIREs Mech Dis. 2022 05; 14(3):e1548. PMID: 35037736.
    Citations:    Fields:    
  5. Zhang HG, Hejblum BP, Weber GM, Palmer NP, Churchill SE, Szolovits P, Murphy SN, Liao KP, Kohane IS, Cai T. ATLAS: an automated association test using probabilistically linked health records with application to genetic studies. J Am Med Inform Assoc. 2021 11 25; 28(12):2582-2592. PMID: 34608931; PMCID: PMC8633652.
    Citations:    Fields:    Translation:Humans
  6. Hsu TH, Schawkat K, Berkowitz SJ, Wei JL, Makoyeva A, Legare K, DeCicco C, Paez SN, Wu JSH, Szolovits P, Kikinis R, Moser AJ, Goehler A. Artificial intelligence to assess body composition on routine abdominal CT scans and predict mortality in pancreatic cancer- A recipe for your local application. Eur J Radiol. 2021 Sep; 142:109834. PMID: 34252866.
    Citations: 3     Fields:    Translation:Humans
  7. Goehler A, Hsu TH, Seiglie JA, Siedner MJ, Lo J, Triant V, Hsu J, Foulkes A, Bassett I, Khorasani R, Wexler DJ, Szolovits P, Meigs JB, Manne-Goehler J. Visceral Adiposity and Severe COVID-19 Disease: Application of an Artificial Intelligence Algorithm to Improve Clinical Risk Prediction. Open Forum Infect Dis. 2021 Jul; 8(7):ofab275. PMID: 34258315; PMCID: PMC8244656.
    Citations: 4     
  8. Boag W, Kovaleva O, McCoy TH, Rumshisky A, Szolovits P, Perlis RH. Hard for humans, hard for machines: predicting readmission after psychiatric hospitalization using narrative notes. Transl Psychiatry. 2021 01 11; 11(1):32. PMID: 33431794; PMCID: PMC7801508.
    Citations: 5     Fields:    Translation:Humans
  9. McDermott MBA, Wang J, Zhao WN, Sheridan SD, Szolovits P, Kohane I, Haggarty SJ, Perlis RH. Deep Learning Benchmarks on L1000 Gene Expression Data. IEEE/ACM Trans Comput Biol Bioinform. 2020 Nov-Dec; 17(6):1846-1857. PMID: 30990190.
    Citations: 2     Fields:    Translation:HumansCells
  10. Chauhan G, Liao R, Wells W, Andreas J, Wang X, Berkowitz S, Horng S, Szolovits P, Golland P. Joint Modeling of Chest Radiographs and Radiology Reports for Pulmonary Edema Assessment. Med Image Comput Comput Assist Interv. 2020 Oct; 12262:529-539. PMID: 33634272.
    Citations: 1     Fields:    
  11. Luo Y, Eran A, Palmer N, Avillach P, Levy-Moonshine A, Szolovits P, Kohane IS. A multidimensional precision medicine approach identifies an autism subtype characterized by dyslipidemia. Nat Med. 2020 09; 26(9):1375-1379. PMID: 32778826.
    Citations: 11     Fields:    Translation:Humans
  12. Goehler A, Harry Hsu TM, Lacson R, Gujrathi I, Hashemi R, Chlebus G, Szolovits P, Khorasani R. Three-Dimensional Neural Network to Automatically Assess Liver Tumor Burden Change on Consecutive Liver MRIs. J Am Coll Radiol. 2020 Nov; 17(11):1475-1484. PMID: 32721409.
    Citations: 4     Fields:    Translation:Humans
  13. Jin D, Szolovits P. Advancing PICO element detection in biomedical text via deep neural networks. Bioinformatics. 2020 06 01; 36(12):3856-3862. PMID: 32311009.
    Citations: 2     Fields:    Translation:Humans
  14. Zhang Y, Cai T, Yu S, Cho K, Hong C, Sun J, Huang J, Ho YL, Ananthakrishnan AN, Xia Z, Shaw SY, Gainer V, Castro V, Link N, Honerlaw J, Huang S, Gagnon D, Karlson EW, Plenge RM, Szolovits P, Savova G, Churchill S, O'Donnell C, Murphy SN, Gaziano JM, Kohane I, Cai T, Liao KP. High-throughput phenotyping with electronic medical record data using a common semi-supervised approach (PheCAP). Nat Protoc. 2019 12; 14(12):3426-3444. PMID: 31748751; PMCID: PMC7323894.
    Citations: 31     Fields:    Translation:Humans
  15. Liao KP, Sun J, Cai TA, Link N, Hong C, Huang J, Huffman JE, Gronsbell J, Zhang Y, Ho YL, Castro V, Gainer V, Murphy SN, O'Donnell CJ, Gaziano JM, Cho K, Szolovits P, Kohane IS, Yu S, Cai T. High-throughput multimodal automated phenotyping (MAP) with application to PheWAS. J Am Med Inform Assoc. 2019 11 01; 26(11):1255-1262. PMID: 31613361.
    Citations: 19     Fields:    Translation:Humans
  16. Sun M, Baron J, Dighe A, Szolovits P, Wunderink RG, Isakova T, Luo Y. Early Prediction of Acute Kidney Injury in Critical Care Setting Using Clinical Notes and Structured Multivariate Physiological Measurements. Stud Health Technol Inform. 2019 Aug 21; 264:368-372. PMID: 31437947.
    Citations: 7     Fields:    Translation:Humans
  17. Chen IY, Szolovits P, Ghassemi M. Can AI Help Reduce Disparities in General Medical and Mental Health Care? AMA J Ethics. 2019 02 01; 21(2):E167-179. PMID: 30794127.
    Citations: 43     Fields:    Translation:Humans
  18. Luo Y, Szolovits P. Implementing a Portable Clinical NLP System with a Common Data Model - a Lisp Perspective. Proceedings (IEEE Int Conf Bioinformatics Biomed). 2018 Dec; 2018:461-466. PMID: 33376623.
    Citations:    
  19. Hejblum BP, Weber GM, Liao KP, Palmer NP, Churchill S, Shadick NA, Szolovits P, Murphy SN, Kohane IS, Cai T. Probabilistic record linkage of de-identified research datasets with discrepancies using diagnosis codes. Sci Data. 2019 01 08; 6:180298. PMID: 30620344; PMCID: PMC6326114.
    Citations: 6     Fields:    Translation:Humans
  20. Panch T, Szolovits P, Atun R. Artificial intelligence, machine learning and health systems. J Glob Health. 2018 Dec; 8(2):020303. PMID: 30405904.
    Citations: 47     Fields:    Translation:Humans
  21. Lacson RC, Baker B, Suresh H, Andriole K, Szolovits P, Lacson E. Use of machine-learning algorithms to determine features of systolic blood pressure variability that predict poor outcomes in hypertensive patients. Clin Kidney J. 2019 Apr; 12(2):206-212. PMID: 30976397; PMCID: PMC6452173.
    Citations: 10     
  22. Luo Y, Szolovits P, Dighe AS, Baron JM. 3D-MICE: integration of cross-sectional and longitudinal imputation for multi-analyte longitudinal clinical data. J Am Med Inform Assoc. 2018 06 01; 25(6):645-653. PMID: 29202205.
    Citations: 26     Fields:    
  23. Boag W, Doss D, Naumann T, Szolovits P. What's in a Note? Unpacking Predictive Value in Clinical Note Representations. AMIA Jt Summits Transl Sci Proc. 2018; 2017:26-34. PMID: 29888035; PMCID: PMC5961801.
    Citations: 6     
  24. Yu S, Ma Y, Gronsbell J, Cai T, Ananthakrishnan AN, Gainer VS, Churchill SE, Szolovits P, Murphy SN, Kohane IS, Liao KP, Cai T. Enabling phenotypic big data with PheNorm. J Am Med Inform Assoc. 2018 01 01; 25(1):54-60. PMID: 29126253.
    Citations: 33     Fields:    Translation:Humans
  25. Luo Y, Cheng Y, Uzuner Ö, Szolovits P, Starren J. Segment convolutional neural networks (Seg-CNNs) for classifying relations in clinical notes. J Am Med Inform Assoc. 2018 01 01; 25(1):93-98. PMID: 29025149.
    Citations: 30     Fields:    Translation:Humans
  26. Weng WH, Wagholikar KB, McCray AT, Szolovits P, Chueh HC. Medical subdomain classification of clinical notes using a machine learning-based natural language processing approach. BMC Med Inform Decis Mak. 2017 Dec 01; 17(1):155. PMID: 29191207.
    Citations: 29     Fields:    Translation:Humans
  27. Ghassemi M, Wu M, Hughes MC, Szolovits P, Doshi-Velez F. Predicting intervention onset in the ICU with switching state space models. AMIA Jt Summits Transl Sci Proc. 2017; 2017:82-91. PMID: 28815112; PMCID: PMC5543372.
    Citations: 12     
  28. Luo Y, Uzuner Ö, Szolovits P. Bridging semantics and syntax with graph algorithms-state-of-the-art of extracting biomedical relations. Brief Bioinform. 2017 07 01; 18(4):722. PMID: 28472242; PMCID: PMC6080366.
    Citations:    Fields:    
  29. Ong MS, Mullen MP, Austin ED, Szolovits P, Natter MD, Geva A, Cai T, Kong SW, Mandl KD. Learning a Comorbidity-Driven Taxonomy of Pediatric Pulmonary Hypertension. Circ Res. 2017 Aug 04; 121(4):341-353. PMID: 28611076; PMCID: PMC5559726.
    Citations: 5     Fields:    Translation:Humans
  30. Luo Y, Wang F, Szolovits P. Tensor factorization toward precision medicine. Brief Bioinform. 2017 05 01; 18(3):511-514. PMID: 26994614; PMCID: PMC6078180.
    Citations: 17     Fields:    Translation:Humans
  31. Dernoncourt F, Lee JY, Uzuner O, Szolovits P. De-identification of patient notes with recurrent neural networks. J Am Med Inform Assoc. 2017 May 01; 24(3):596-606. PMID: 28040687; PMCID: PMC7787254.
    Citations: 72     Fields:    Translation:Humans
  32. Wu M, Ghassemi M, Feng M, Celi LA, Szolovits P, Doshi-Velez F. Understanding vasopressor intervention and weaning: risk prediction in a public heterogeneous clinical time series database. J Am Med Inform Assoc. 2017 May 01; 24(3):488-495. PMID: 27707820; PMCID: PMC6455107.
    Citations: 10     Fields:    Translation:Humans
  33. Yu S, Chakrabortty A, Liao KP, Cai T, Ananthakrishnan AN, Gainer VS, Churchill SE, Szolovits P, Murphy SN, Kohane IS, Cai T. Surrogate-assisted feature extraction for high-throughput phenotyping. J Am Med Inform Assoc. 2017 Apr 01; 24(e1):e143-e149. PMID: 27632993; PMCID: PMC6080726.
    Citations: 32     Fields:    Translation:Humans
  34. Rumshisky A, Ghassemi M, Naumann T, Szolovits P, Castro VM, McCoy TH, Perlis RH. Predicting early psychiatric readmission with natural language processing of narrative discharge summaries. Transl Psychiatry. 2016 10 18; 6(10):e921. PMID: 27754482.
    Citations: 48     Fields:    Translation:Humans
  35. Manrai AK, Funke BH, Rehm HL, Olesen MS, Maron BA, Szolovits P, Margulies DM, Loscalzo J, Kohane IS. Genetic Misdiagnoses and the Potential for Health Disparities. N Engl J Med. 2016 Aug 18; 375(7):655-65. PMID: 27532831; PMCID: PMC5292722.
    Citations: 255     Fields:    Translation:Humans
  36. Hoogendoorn M, Berger T, Schulz A, Stolz T, Szolovits P. Predicting Social Anxiety Treatment Outcome Based on Therapeutic Email Conversations. IEEE J Biomed Health Inform. 2017 09; 21(5):1449-1459. PMID: 27542187.
    Citations: 11     Fields:    Translation:Humans
  37. Hoogendoorn M, El Hassouni A, Mok K, Ghassemi M, Szolovits P. Prediction using patient comparison vs. modeling: a case study for mortality prediction. Annu Int Conf IEEE Eng Med Biol Soc. 2016 Aug; 2016:2464-2467. PMID: 28268823.
    Citations: 5     Fields:    Translation:Humans
  38. Luo Y, Szolovits P. Efficient Queries of Stand-off Annotations for Natural Language Processing on Electronic Medical Records. Biomed Inform Insights. 2016; 8:29-38. PMID: 27478379; PMCID: PMC4954589.
    Citations: 4     
  39. Luo Y, Szolovits P, Dighe AS, Baron JM. Using Machine Learning to Predict Laboratory Test Results. Am J Clin Pathol. 2016 Jun; 145(6):778-88. PMID: 27329638.
    Citations: 32     Fields:    Translation:Humans
  40. Johnson AE, Pollard TJ, Shen L, Lehman LW, Feng M, Ghassemi M, Moody B, Szolovits P, Celi LA, Mark RG. MIMIC-III, a freely accessible critical care database. Sci Data. 2016 May 24; 3:160035. PMID: 27219127.
    Citations: 1095     Fields:    Translation:Humans
  41. Hoogendoorn M, Szolovits P, Moons LMG, Numans ME. Utilizing uncoded consultation notes from electronic medical records for predictive modeling of colorectal cancer. Artif Intell Med. 2016 05; 69:53-61. PMID: 27085847.
    Citations: 13     Fields:    Translation:Humans
  42. Luo Y, Uzuner Ö, Szolovits P. Bridging semantics and syntax with graph algorithms-state-of-the-art of extracting biomedical relations. Brief Bioinform. 2017 01; 18(1):160-178. PMID: 26851224; PMCID: PMC5221425.
    Citations: 25     Fields:    Translation:Humans
  43. Liao KP, Ananthakrishnan AN, Kumar V, Xia Z, Cagan A, Gainer VS, Goryachev S, Chen P, Savova GK, Agniel D, Churchill S, Lee J, Murphy SN, Plenge RM, Szolovits P, Kohane I, Shaw SY, Karlson EW, Cai T. Methods to Develop an Electronic Medical Record Phenotype Algorithm to Compare the Risk of Coronary Artery Disease across 3 Chronic Disease Cohorts. PLoS One. 2015; 10(8):e0136651. PMID: 26301417.
    Citations: 43     Fields:    Translation:Humans
  44. Yu S, Liao KP, Shaw SY, Gainer VS, Churchill SE, Szolovits P, Murphy SN, Kohane IS, Cai T. Toward high-throughput phenotyping: unbiased automated feature extraction and selection from knowledge sources. J Am Med Inform Assoc. 2015 Sep; 22(5):993-1000. PMID: 25929596.
    Citations: 75     Fields:    Translation:Humans
  45. Liao KP, Cai T, Savova GK, Murphy SN, Karlson EW, Ananthakrishnan AN, Gainer VS, Shaw SY, Xia Z, Szolovits P, Churchill S, Kohane I. Development of phenotype algorithms using electronic medical records and incorporating natural language processing. BMJ. 2015 Apr 24; 350:h1885. PMID: 25911572; PMCID: PMC4707569.
    Citations: 106     Fields:    Translation:Humans
  46. Luo Y, Xin Y, Hochberg E, Joshi R, Uzuner O, Szolovits P. Subgraph augmented non-negative tensor factorization (SANTF) for modeling clinical narrative text. J Am Med Inform Assoc. 2015 Sep; 22(5):1009-19. PMID: 25862765.
    Citations: 25     Fields:    Translation:Humans
  47. Ghassemi M, Pimentel MA, Naumann T, Brennan T, Clifton DA, Szolovits P, Feng M. A Multivariate Timeseries Modeling Approach to Severity of Illness Assessment and Forecasting in ICU with Sparse, Heterogeneous Clinical Data. Proc Conf AAAI Artif Intell. 2015 Jan; 2015:446-453. PMID: 27182460; PMCID: PMC4864016.
    Citations: 27     
  48. Luo Y, Riedlinger G, Szolovits P. Text mining in cancer gene and pathway prioritization. Cancer Inform. 2014; 13(Suppl 1):69-79. PMID: 25392685; PMCID: PMC4216063.
    Citations: 15     
  49. Ghassemi M, Naumann T, Doshi-Velez F, Brimmer N, Joshi R, Rumshisky A, Szolovits P. Unfolding Physiological State: Mortality Modelling in Intensive Care Units. KDD. 2014 Aug 24; 2014:75-84. PMID: 25289175.
    Citations: 41     
  50. Sinnott JA, Dai W, Liao KP, Shaw SY, Ananthakrishnan AN, Gainer VS, Karlson EW, Churchill S, Szolovits P, Murphy S, Kohane I, Plenge R, Cai T. Improving the power of genetic association tests with imperfect phenotype derived from electronic medical records. Hum Genet. 2014 Nov; 133(11):1369-82. PMID: 25062868.
    Citations: 23     Fields:    Translation:Humans
  51. Velasquez A, Ghassemi M, Szolovits P, Park S, Osorio J, Dejam A, Celi L. Long-term outcomes of minor troponin elevations in the intensive care unit. Anaesth Intensive Care. 2014 May; 42(3):356-64. PMID: 24794476.
    Citations: 3     Fields:    Translation:Humans
  52. Brownstein CA, Beggs AH, Homer N, Merriman B, Yu TW, Flannery KC, DeChene ET, Towne MC, Savage SK, Price EN, Holm IA, Luquette LJ, Lyon E, Majzoub J, Neupert P, McCallie D, Szolovits P, Willard HF, Mendelsohn NJ, Temme R, Finkel RS, Yum SW, Medne L, Sunyaev SR, Adzhubey I, Cassa CA, de Bakker PI, Duzkale H, Dworzynski P, Fairbrother W, Francioli L, Funke BH, Giovanni MA, Handsaker RE, Lage K, Lebo MS, Lek M, Leshchiner I, MacArthur DG, McLaughlin HM, Murray MF, Pers TH, Polak PP, Raychaudhuri S, Rehm HL, Soemedi R, Stitziel NO, Vestecka S, Supper J, Gugenmus C, Klocke B, Hahn A, Schubach M, Menzel M, Biskup S, Freisinger P, Deng M, Braun M, Perner S, Smith RJ, Andorf JL, Huang J, Ryckman K, Sheffield VC, Stone EM, Bair T, Black-Ziegelbein EA, Braun TA, Darbro B, DeLuca AP, Kolbe DL, Scheetz TE, Shearer AE, Sompallae R, Wang K, Bassuk AG, Edens E, Mathews K, Moore SA, Shchelochkov OA, Trapane P, Bossler A, Campbell CA, Heusel JW, Kwitek A, Maga T, Panzer K, Wassink T, Van Daele D, Azaiez H, Booth K, Meyer N, Segal MM, Williams MS, Tromp G, White P, Corsmeier D, Fitzgerald-Butt S, Herman G, Lamb-Thrush D, McBride KL, Newsom D, Pierson CR, Rakowsky AT, Maver A, Lovrecic L, Palandacic A, Peterlin B, Torkamani A, Wedell A, Huss M, Alexeyenko A, Lindvall JM, Magnusson M, Nilsson D, Stranneheim H, Taylan F, Gilissen C, Hoischen A, van Bon B, Yntema H, Nelen M, Zhang W, Sager J, Zhang L, Blair K, Kural D, Cariaso M, Lennon GG, Javed A, Agrawal S, Ng PC, Sandhu KS, Krishna S, Veeramachaneni V, Isakov O, Halperin E, Friedman E, Shomron N, Glusman G, Roach JC, Caballero J, Cox HC, Mauldin D, Ament SA, Rowen L, Richards DR, San Lucas FA, Gonzalez-Garay ML, Caskey CT, Bai Y, Huang Y, Fang F, Zhang Y, Wang Z, Barrera J, Garcia-Lobo JM, González-Lamuño D, Llorca J, Rodriguez MC, Varela I, Reese MG, De La Vega FM, Kiruluta E, Cargill M, Hart RK, Sorenson JM, Lyon GJ, Stevenson DA, Bray BE, Moore BM, Eilbeck K, Yandell M, Zhao H, Hou L, Chen X, Yan X, Chen M, Li C, Yang C, Gunel M, Li P, Kong Y, Alexander AC, Albertyn ZI, Boycott KM, Bulman DE, Gordon PM, Innes AM, Knoppers BM, Majewski J, Marshall CR, Parboosingh JS, Sawyer SL, Samuels ME, Schwartzentruber J, Kohane IS, Margulies DM. An international effort towards developing standards for best practices in analysis, interpretation and reporting of clinical genome sequencing results in the CLARITY Challenge. Genome Biol. 2014 Mar 25; 15(3):R53. PMID: 24667040.
    Citations: 53     Fields:    Translation:Humans
  53. Ananthakrishnan AN, Cagan A, Gainer VS, Cheng SC, Cai T, Szolovits P, Shaw SY, Churchill S, Karlson EW, Murphy SN, Kohane I, Liao KP. Higher plasma vitamin D is associated with reduced risk of Clostridium difficile infection in patients with inflammatory bowel diseases. Aliment Pharmacol Ther. 2014 May; 39(10):1136-42. PMID: 24641590.
    Citations: 31     Fields:    Translation:HumansCells
  54. Ananthakrishnan AN, Cagan A, Gainer VS, Cheng SC, Cai T, Scoville E, Konijeti GG, Szolovits P, Shaw SY, Churchill S, Karlson EW, Murphy SN, Kohane I, Liao KP. Thromboprophylaxis is associated with reduced post-hospitalization venous thromboembolic events in patients with inflammatory bowel diseases. Clin Gastroenterol Hepatol. 2014 Nov; 12(11):1905-10. PMID: 24632349.
    Citations: 15     Fields:    Translation:Humans
  55. Ananthakrishnan AN, Cagan A, Gainer VS, Cheng SC, Cai T, Szolovits P, Shaw SY, Churchill S, Karlson EW, Murphy SN, Kohane I, Liao KP. Mortality and extraintestinal cancers in patients with primary sclerosing cholangitis and inflammatory bowel disease. J Crohns Colitis. 2014 Sep; 8(9):956-63. PMID: 24559536.
    Citations: 20     Fields:    Translation:Humans
  56. Chasin R, Rumshisky A, Uzuner O, Szolovits P. Word sense disambiguation in the clinical domain: a comparison of knowledge-rich and knowledge-poor unsupervised methods. J Am Med Inform Assoc. 2014 Sep-Oct; 21(5):842-9. PMID: 24441986.
    Citations: 12     Fields:    Translation:Humans
  57. Luo Y, Sohani AR, Hochberg EP, Szolovits P. Automatic lymphoma classification with sentence subgraph mining from pathology reports. J Am Med Inform Assoc. 2014 Sep-Oct; 21(5):824-32. PMID: 24431333.
    Citations: 28     Fields:    Translation:Humans
  58. Ananthakrishnan AN, Cheng SC, Cai T, Cagan A, Gainer VS, Szolovits P, Shaw SY, Churchill S, Karlson EW, Murphy SN, Kohane I, Liao KP. Serum inflammatory markers and risk of colorectal cancer in patients with inflammatory bowel diseases. Clin Gastroenterol Hepatol. 2014 Aug; 12(8):1342-8.e1. PMID: 24407106.
    Citations: 18     Fields:    Translation:Humans
  59. Klann JG, Szolovits P, Downs SM, Schadow G. Decision support from local data: creating adaptive order menus from past clinician behavior. J Biomed Inform. 2014 Apr; 48:84-93. PMID: 24355978.
    Citations: 19     Fields:    Translation:Humans
  60. Xia Z, Secor E, Chibnik LB, Bove RM, Cheng S, Chitnis T, Cagan A, Gainer VS, Chen PJ, Liao KP, Shaw SY, Ananthakrishnan AN, Szolovits P, Weiner HL, Karlson EW, Murphy SN, Savova GK, Cai T, Churchill SE, Plenge RM, Kohane IS, De Jager PL. Modeling disease severity in multiple sclerosis using electronic health records. PLoS One. 2013; 8(11):e78927. PMID: 24244385.
    Citations: 35     Fields:    Translation:HumansCTClinical Trials
  61. Manrai AK, Kohane IS, Szolovits P. Urinary-cell mRNA and acute kidney-transplant rejection. N Engl J Med. 2013 11 07; 369(19):1859. PMID: 24195557.
    Citations: 1     Fields:    Translation:Humans
  62. Ananthakrishnan AN, Cheng SC, Cai T, Cagan A, Gainer VS, Szolovits P, Shaw SY, Churchill S, Karlson EW, Murphy SN, Kohane I, Liao KP. Association between reduced plasma 25-hydroxy vitamin D and increased risk of cancer in patients with inflammatory bowel diseases. Clin Gastroenterol Hepatol. 2014 May; 12(5):821-7. PMID: 24161349.
    Citations: 41     Fields:    Translation:Humans
  63. Ananthakrishnan AN, Cagan A, Gainer VS, Cai T, Cheng SC, Savova G, Chen P, Szolovits P, Xia Z, De Jager PL, Shaw SY, Churchill S, Karlson EW, Kohane I, Plenge RM, Murphy SN, Liao KP. Normalization of plasma 25-hydroxy vitamin D is associated with reduced risk of surgery in Crohn's disease. Inflamm Bowel Dis. 2013 Aug; 19(9):1921-7. PMID: 23751398.
    Citations: 92     Fields:    Translation:Humans
  64. Ananthakrishnan AN, Cai T, Savova G, Cheng SC, Chen P, Perez RG, Gainer VS, Murphy SN, Szolovits P, Xia Z, Shaw S, Churchill S, Karlson EW, Kohane I, Plenge RM, Liao KP. Improving case definition of Crohn's disease and ulcerative colitis in electronic medical records using natural language processing: a novel informatics approach. Inflamm Bowel Dis. 2013 Jun; 19(7):1411-20. PMID: 23567779.
    Citations: 80     Fields:    Translation:Humans
  65. Liao KP, Diogo D, Cui J, Cai T, Okada Y, Gainer VS, Murphy SN, Gupta N, Mirel D, Ananthakrishnan AN, Szolovits P, Shaw SY, Raychaudhuri S, Churchill S, Kohane I, Karlson EW, Plenge RM. Association between low density lipoprotein and rheumatoid arthritis genetic factors with low density lipoprotein levels in rheumatoid arthritis and non-rheumatoid arthritis controls. Ann Rheum Dis. 2014 Jun; 73(6):1170-5. PMID: 23716066.
    Citations: 17     Fields:    Translation:Humans
  66. Liao KP, Kurreeman F, Li G, Duclos G, Murphy S, Guzman R, Cai T, Gupta N, Gainer V, Schur P, Cui J, Denny JC, Szolovits P, Churchill S, Kohane I, Karlson EW, Plenge RM. Associations of autoantibodies, autoimmune risk alleles, and clinical diagnoses from the electronic medical records in rheumatoid arthritis cases and non-rheumatoid arthritis controls. Arthritis Rheum. 2013 Mar; 65(3):571-81. PMID: 23233247; PMCID: PMC3582761.
    Citations: 54     Fields:    Translation:Humans
  67. Ananthakrishnan AN, Gainer VS, Cai T, Perez RG, Cheng SC, Savova G, Chen P, Szolovits P, Xia Z, De Jager PL, Shaw S, Churchill S, Karlson EW, Kohane I, Perlis RH, Plenge RM, Murphy SN, Liao KP. Similar risk of depression and anxiety following surgery or hospitalization for Crohn's disease and ulcerative colitis. Am J Gastroenterol. 2013 Apr; 108(4):594-601. PMID: 23337479.
    Citations: 29     Fields:    Translation:Humans
  68. Ananthakrishnan AN, Gainer VS, Perez RG, Cai T, Cheng SC, Savova G, Chen P, Szolovits P, Xia Z, De Jager PL, Shaw SY, Churchill S, Karlson EW, Kohane I, Perlis RH, Plenge RM, Murphy SN, Liao KP. Psychiatric co-morbidity is associated with increased risk of surgery in Crohn's disease. Aliment Pharmacol Ther. 2013 Feb; 37(4):445-54. PMID: 23289600.
    Citations: 45     Fields:    Translation:Humans
  69. Joshi R, Szolovits P. Prognostic physiology: modeling patient severity in Intensive Care Units using radial domain folding. AMIA Annu Symp Proc. 2012; 2012:1276-83. PMID: 23304406.
    Citations: 11     Fields:    Translation:Humans
  70. Bodnari A, Szolovits P, Uzuner Ö. MCORES: a system for noun phrase coreference resolution for clinical records. J Am Med Inform Assoc. 2012 Sep-Oct; 19(5):906-12. PMID: 22419739.
    Citations: 4     Fields:    Translation:Humans
  71. Rudin RS, Schneider EC, Volk LA, Szolovits P, Salzberg CA, Simon SR, Bates DW. Simulation Suggests that medical group mergers won't undermine the potential utility of health information exchanges. Health Aff (Millwood). 2012 Mar; 31(3):548-59. PMID: 22392665.
    Citations:    Fields:    Translation:Humans
  72. Rudin RS, Salzberg CA, Szolovits P, Volk LA, Simon SR, Bates DW. Care transitions as opportunities for clinicians to use data exchange services: how often do they occur? J Am Med Inform Assoc. 2011 Nov-Dec; 18(6):853-8. PMID: 21531703.
    Citations: 5     Fields:    Translation:Humans
  73. Kohane IS, Szolovits P. Marco Ramoni: an appreciation of academic achievement. J Am Med Inform Assoc. 2011 Jul-Aug; 18(4):367-9. PMID: 21474623; PMCID: PMC3128413.
    Citations: 1     Fields:    Translation:Humans
  74. Kurreeman F, Liao K, Chibnik L, Hickey B, Stahl E, Gainer V, Li G, Bry L, Mahan S, Ardlie K, Thomson B, Szolovits P, Churchill S, Murphy SN, Cai T, Raychaudhuri S, Kohane I, Karlson E, Plenge RM. Genetic basis of autoantibody positive and negative rheumatoid arthritis risk in a multi-ethnic cohort derived from electronic health records. Am J Hum Genet. 2011 Jan 07; 88(1):57-69. PMID: 21211616; PMCID: PMC3014362.
    Citations: 65     Fields:    Translation:Humans
  75. Liao KP, Cai T, Gainer V, Goryachev S, Zeng-treitler Q, Raychaudhuri S, Szolovits P, Churchill S, Murphy S, Kohane I, Karlson EW, Plenge RM. Electronic medical records for discovery research in rheumatoid arthritis. Arthritis Care Res (Hoboken). 2010 Aug; 62(8):1120-7. PMID: 20235204.
    Citations: 171     Fields:    Translation:Humans
  76. Hug CW, Szolovits P. ICU acuity: real-time models versus daily models. AMIA Annu Symp Proc. 2009 Nov 14; 2009:260-4. PMID: 20351861.
    Citations: 11     Fields:    Translation:Humans
  77. Klann JG, Szolovits P. An intelligent listening framework for capturing encounter notes from a doctor-patient dialog. BMC Med Inform Decis Mak. 2009 Nov 03; 9 Suppl 1:S3. PMID: 19891797.
    Citations: 7     Fields:    Translation:Humans
  78. Clifford GD, Long WJ, Moody GB, Szolovits P. Robust parameter extraction for decision support using multimodal intensive care data. Philos Trans A Math Phys Eng Sci. 2009 Jan 28; 367(1887):411-29. PMID: 18936019.
    Citations: 17     Fields:    Translation:Humans
  79. Celi LA, Hinske LC, Alterovitz G, Szolovits P. An artificial intelligence tool to predict fluid requirement in the intensive care unit: a proof-of-concept study. Crit Care. 2008; 12(6):R151. PMID: 19046450.
    Citations: 12     Fields:    Translation:Humans
  80. Patel VL, Shortliffe EH, Stefanelli M, Szolovits P, Berthold MR, Bellazzi R, Abu-Hanna A. The coming of age of artificial intelligence in medicine. Artif Intell Med. 2009 May; 46(1):5-17. PMID: 18790621.
    Citations: 81     Fields:    Translation:Humans
  81. Neamatullah I, Douglass MM, Lehman LW, Reisner A, Villarroel M, Long WJ, Szolovits P, Moody GB, Mark RG, Clifford GD. Automated de-identification of free-text medical records. BMC Med Inform Decis Mak. 2008 Jul 24; 8:32. PMID: 18652655.
    Citations: 110     Fields:    Translation:Humans
  82. Zhang Y, Szolovits P. Patient-specific learning in real time for adaptive monitoring in critical care. J Biomed Inform. 2008 Jun; 41(3):452-60. PMID: 18463000.
    Citations: 15     Fields:    
  83. Uzuner O, Sibanda TC, Luo Y, Szolovits P. A de-identifier for medical discharge summaries. Artif Intell Med. 2008 Jan; 42(1):13-35. PMID: 18053696.
    Citations: 33     Fields:    Translation:Humans
  84. Uzuner O, Luo Y, Szolovits P. Evaluating the state-of-the-art in automatic de-identification. J Am Med Inform Assoc. 2007 Sep-Oct; 14(5):550-63. PMID: 17600094.
    Citations: 152     Fields:    Translation:Humans
  85. Szolovits P. What is a grid? J Am Med Inform Assoc. 2007 May-Jun; 14(3):386. PMID: 17329718.
    Citations: 1     Fields:    
  86. Sebastiani P, Mandl KD, Szolovits P, Kohane IS, Ramoni MF. A Bayesian dynamic model for influenza surveillance. Stat Med. 2006 Jun 15; 25(11):1803-16; discussion 1817-25. PMID: 16645996.
    Citations: 18     Fields:    Translation:HumansCellsPHPublic Health
  87. Mohtashemi M, Szolovits P, Dunyak J, Mandl KD. A susceptible-infected model of early detection of respiratory infection outbreaks on a background of influenza. J Theor Biol. 2006 Aug 21; 241(4):954-63. PMID: 16556450; PMCID: PMC3754793.
    Citations: 3     Fields:    Translation:HumansPHPublic Health
  88. Heldt T, Long B, Verghese GC, Szolovits P, Mark RG. Integrating data, models, and reasoning in critical care. Conf Proc IEEE Eng Med Biol Soc. 2006; 2006:350-3. PMID: 17946818.
    Citations: 7     Fields:    Translation:Humans
  89. Sibanda T, He T, Szolovits P, Uzuner O. Syntactically-informed semantic category recognition in discharge summaries. AMIA Annu Symp Proc. 2006; 714-8. PMID: 17238434.
    Citations: 12     Fields:    Translation:Humans
  90. Fraser HS, Biondich P, Moodley D, Choi S, Mamlin BW, Szolovits P. Implementing electronic medical record systems in developing countries. Inform Prim Care. 2005; 13(2):83-95. PMID: 15992493.
    Citations: 71     Fields:    Translation:Humans
  91. Fioriglio G, Szolovits P. Copy fees and patients' rights to obtain a copy of their medical records: from law to reality. AMIA Annu Symp Proc. 2005; 251-5. PMID: 16779040.
    Citations: 3     Fields:    Translation:Humans
  92. Szolovits P. Adding a medical lexicon to an English Parser. AMIA Annu Symp Proc. 2003; 639-43. PMID: 14728251.
    Citations: 9     Fields:    
  93. Riva A, Mandl KD, Oh DH, Nigrin DJ, Butte A, Szolovits P, Kohane IS. The personal internetworked notary and guardian. Int J Med Inform. 2001 Jun; 62(1):27-40. PMID: 11340004.
    Citations: 13     Fields:    Translation:HumansPHPublic Health
  94. Mandl KD, Szolovits P, Kohane IS. Public standards and patients' control: how to keep electronic medical records accessible but private. BMJ. 2001 Feb 03; 322(7281):283-7. PMID: 11157533; PMCID: PMC1119527.
    Citations: 58     Fields:    Translation:Humans
  95. Fraser HS, Jazayeri D, Bannach L, Szolovits P, McGrath SJ. TeleMedMail: free software to facilitate telemedicine in developing countries. Stud Health Technol Inform. 2001; 84(Pt 1):815-9. PMID: 11604848.
    Citations: 6     Fields:    
  96. Kohane IS, Dong H, Szolovits P. Health information identification and de-identification toolkit. Proc AMIA Symp. 1998; 356-60. PMID: 9929241.
    Citations: 6     Fields:    Translation:Humans
  97. Halamka JD, Szolovits P, Rind D, Safran C. A WWW implementation of national recommendations for protecting electronic health information. J Am Med Inform Assoc. 1997 Nov-Dec; 4(6):458-64. PMID: 9391933; PMCID: PMC61263.
    Citations: 8     Fields:    
  98. Rind DM, Kohane IS, Szolovits P, Safran C, Chueh HC, Barnett GO. Maintaining the confidentiality of medical records shared over the Internet and the World Wide Web. Ann Intern Med. 1997 Jul 15; 127(2):138-41. PMID: 9230004.
    Citations: 22     Fields:    Translation:Humans
  99. Wang K, van Wingerde FJ, Bradshaw K, Szolovits P, Kohane I. A Java-based multi-institutional medical information retrieval system. Proc AMIA Annu Fall Symp. 1997; 538-42. PMID: 9357684.
    Citations: 4     Fields:    
  100. Kohane IS, Greenspun P, Fackler J, Cimino C, Szolovits P. Building national electronic medical record systems via the World Wide Web. J Am Med Inform Assoc. 1996 May-Jun; 3(3):191-207. PMID: 8723610.
    Citations: 29     Fields:    Translation:Humans
  101. Kohane IS, van Wingerde FJ, Fackler JC, Cimino C, Kilbridge P, Murphy S, Chueh H, Rind D, Safran C, Barnett O, Szolovits P. Sharing electronic medical records across multiple heterogeneous and competing institutions. Proc AMIA Annu Fall Symp. 1996; 608-12. PMID: 8947738.
    Citations: 13     Fields:    
  102. van Wingerde FJ, Schindler J, Kilbridge P, Szolovits P, Safran C, Rind D, Murphy S, Barnett GO, Kohane IS. Using HL7 and the World Wide Web for unifying patient data from remote databases. Proc AMIA Annu Fall Symp. 1996; 643-7. PMID: 8947745.
    Citations: 4     Fields:    
  103. Szolovits P. Uncertainty and decisions in medical informatics. Methods Inf Med. 1995 Mar; 34(1-2):111-21. PMID: 9082120.
    Citations: 11     Fields:    Translation:Humans
  104. Szolovits P, Kohane I. Against simple universal health-care identifiers. J Am Med Inform Assoc. 1994 Jul-Aug; 1(4):316-9. PMID: 7719815.
    Citations: 6     Fields:    Translation:Humans
  105. Szolovits P, Pauker SG. A coherent philosophy for development or a straightjacket for research? Methods Inf Med. 1993; 32(1):16-7. PMID: 21203680.
    Citations:    Fields:    
  106. Szolovits P. Compilation for fast calculation over pedigrees. Cytogenet Cell Genet. 1992; 59(2-3):136-8. PMID: 1737481.
    Citations:    Fields:    Translation:Humans
  107. Szolovits P, Patil RS, Schwartz WB. Artificial intelligence in medical diagnosis. Ann Intern Med. 1988 Jan; 108(1):80-7. PMID: 3276267.
    Citations: 24     Fields:    
  108. Schwartz WB, Patil RS, Szolovits P. Artificial intelligence in medicine. Where do we stand? N Engl J Med. 1987 Mar 12; 316(11):685-8. PMID: 3821801.
    Citations: 26     Fields:    
  109. Potvin AR, Crosier WG, Fromm E, Lin JC, Neuman MR, Pilkington TC, Robinson CJ, Schneider LW, Strohbehn JW, Szolovits P, et al. Report of an IEEE task force--an IEEE opinion on research needs for biomedical engineering systems. IEEE Trans Biomed Eng. 1986 Jan; 33(1):48-59. PMID: 3940989.
    Citations: 1     Fields:    Translation:Humans
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Funded by the NIH National Center for Advancing Translational Sciences through its Clinical and Translational Science Awards Program, grant number UL1TR002541.