Harvard Catalyst Profiles

Contact, publication, and social network information about Harvard faculty and fellows.

Marek R. Kubicki, M.D.

Co-Author

This page shows the publications co-authored by Marek Kubicki and Carl-Fredrik Westin.
Connection Strength

4.111
  1. Kubicki M, Baxi M, Pasternak O, Tang Y, Karmacharya S, Chunga N, Lyall AE, Rathi Y, Eckbo R, Bouix S, Mortazavi F, Papadimitriou G, Shenton ME, Westin CF, Killiany R, Makris N, Rosene DL. Lifespan Trajectories of White Matter Changes in Rhesus Monkeys. Cereb Cortex. 2019 04 01; 29(4):1584-1593.
    View in: PubMed
    Score: 0.227
  2. Lyall AE, Savadjiev P, Del Re EC, Seitz J, O'Donnell LJ, Westin CF, Mesholam-Gately RI, Petryshen T, Wojcik JD, Nestor P, Niznikiewicz M, Goldstein J, Seidman LJ, McCarley RW, Shenton ME, Kubicki M. Utilizing Mutual Information Analysis to Explore the Relationship Between Gray and White Matter Structural Pathologies in Schizophrenia. Schizophr Bull. 2019 03 07; 45(2):386-395.
    View in: PubMed
    Score: 0.226
  3. Sydnor VJ, Rivas-Grajales AM, Lyall AE, Zhang F, Bouix S, Karmacharya S, Shenton ME, Westin CF, Makris N, Wassermann D, O'Donnell LJ, Kubicki M. A comparison of three fiber tract delineation methods and their impact on white matter analysis. Neuroimage. 2018 09; 178:318-331.
    View in: PubMed
    Score: 0.214
  4. Westin CF, Knutsson H, Pasternak O, Szczepankiewicz F, Özarslan E, van Westen D, Mattisson C, Bogren M, O'Donnell LJ, Kubicki M, Topgaard D, Nilsson M. Q-space trajectory imaging for multidimensional diffusion MRI of the human brain. Neuroimage. 2016 07 15; 135:345-62.
    View in: PubMed
    Score: 0.183
  5. Wassermann D, Makris N, Rathi Y, Shenton M, Kikinis R, Kubicki M, Westin CF. The white matter query language: a novel approach for describing human white matter anatomy. Brain Struct Funct. 2016 12; 221(9):4705-4721.
    View in: PubMed
    Score: 0.182
  6. Ohtani T, Bouix S, Lyall AE, Hosokawa T, Saito Y, Melonakos E, Westin CF, Seidman LJ, Goldstein J, Mesholam-Gately R, Petryshen T, Wojcik J, Kubicki M. Abnormal white matter connections between medial frontal regions predict symptoms in patients with first episode schizophrenia. Cortex. 2015 Oct; 71:264-76.
    View in: PubMed
    Score: 0.175
  7. Pasternak O, Westin CF, Dahlben B, Bouix S, Kubicki M. The extent of diffusion MRI markers of neuroinflammation and white matter deterioration in chronic schizophrenia. Schizophr Res. 2015 Jan; 161(1):113-8.
    View in: PubMed
    Score: 0.165
  8. Wassermann D, Makris N, Rathi Y, Shenton M, Kikinis R, Kubicki M, Westin CF. On describing human white matter anatomy: the white matter query language. Med Image Comput Comput Assist Interv. 2013; 16(Pt 1):647-54.
    View in: PubMed
    Score: 0.148
  9. Pasternak O, Westin CF, Bouix S, Seidman LJ, Goldstein JM, Woo TU, Petryshen TL, Mesholam-Gately RI, McCarley RW, Kikinis R, Shenton ME, Kubicki M. Excessive extracellular volume reveals a neurodegenerative pattern in schizophrenia onset. J Neurosci. 2012 Nov 28; 32(48):17365-72.
    View in: PubMed
    Score: 0.147
  10. Rosenberger G, Nestor PG, Oh JS, Levitt JJ, Kindleman G, Bouix S, Fitzsimmons J, Niznikiewicz M, Westin CF, Kikinis R, McCarley RW, Shenton ME, Kubicki M. Anterior limb of the internal capsule in schizophrenia: a diffusion tensor tractography study. Brain Imaging Behav. 2012 Sep; 6(3):417-25.
    View in: PubMed
    Score: 0.144
  11. Makris N, Preti MG, Asami T, Pelavin P, Campbell B, Papadimitriou GM, Kaiser J, Baselli G, Westin CF, Shenton ME, Kubicki M. Human middle longitudinal fascicle: variations in patterns of anatomical connections. Brain Struct Funct. 2013 Jul; 218(4):951-68.
    View in: PubMed
    Score: 0.143
  12. Venkataraman A, Whitford TJ, Westin CF, Golland P, Kubicki M. Whole brain resting state functional connectivity abnormalities in schizophrenia. Schizophr Res. 2012 Aug; 139(1-3):7-12.
    View in: PubMed
    Score: 0.142
  13. Kubicki M, Alvarado JL, Westin CF, Tate DF, Markant D, Terry DP, Whitford TJ, De Siebenthal J, Bouix S, McCarley RW, Kikinis R, Shenton ME. Stochastic tractography study of Inferior Frontal Gyrus anatomical connectivity in schizophrenia. Neuroimage. 2011 Apr 15; 55(4):1657-64.
    View in: PubMed
    Score: 0.129
  14. Wassermann D, Rathi Y, Bouix S, Kubicki M, Kikinis R, Shenton M, Westin CF. White matter bundle registration and population analysis based on Gaussian processes. Inf Process Med Imaging. 2011; 22:320-32.
    View in: PubMed
    Score: 0.128
  15. Aja-Fernandez S, Niethammer M, Kubicki M, Shenton ME, Westin CF. Restoration of DWI data using a Rician LMMSE estimator. IEEE Trans Med Imaging. 2008 Oct; 27(10):1389-403.
    View in: PubMed
    Score: 0.110
  16. O'Donnell LJ, Kubicki M, Shenton ME, Dreusicke MH, Grimson WE, Westin CF. A method for clustering white matter fiber tracts. AJNR Am J Neuroradiol. 2006 May; 27(5):1032-6.
    View in: PubMed
    Score: 0.093
  17. San José Estépar R, Kubicki M, Shenton M, Westin CF. A kernel-based approach for user-guided fiber bundling using diffusion tensor data. Conf Proc IEEE Eng Med Biol Soc. 2006; 2006:2626-9.
    View in: PubMed
    Score: 0.091
  18. Kubicki M, Westin CF, McCarley RW, Shenton ME. The application of DTI to investigate white matter abnormalities in schizophrenia. Ann N Y Acad Sci. 2005 Dec; 1064:134-48.
    View in: PubMed
    Score: 0.090
  19. Kubicki M, Park H, Westin CF, Nestor PG, Mulkern RV, Maier SE, Niznikiewicz M, Connor EE, Levitt JJ, Frumin M, Kikinis R, Jolesz FA, McCarley RW, Shenton ME. DTI and MTR abnormalities in schizophrenia: analysis of white matter integrity. Neuroimage. 2005 Jul 15; 26(4):1109-18.
    View in: PubMed
    Score: 0.088
  20. Kubicki M, McCarley R, Westin CF, Park HJ, Maier S, Kikinis R, Jolesz FA, Shenton ME. A review of diffusion tensor imaging studies in schizophrenia. J Psychiatr Res. 2007 Jan-Feb; 41(1-2):15-30.
    View in: PubMed
    Score: 0.088
  21. Kubicki M, Maier SE, Westin CF, Mamata H, Ersner-Hershfield H, Estepar R, Kikinis R, Jolesz FA, McCarley RW, Shenton ME. Comparison of single-shot echo-planar and line scan protocols for diffusion tensor imaging. Acad Radiol. 2004 Feb; 11(2):224-32.
    View in: PubMed
    Score: 0.080
  22. Kubicki M, Westin CF, Nestor PG, Wible CG, Frumin M, Maier SE, Kikinis R, Jolesz FA, McCarley RW, Shenton ME. Cingulate fasciculus integrity disruption in schizophrenia: a magnetic resonance diffusion tensor imaging study. Biol Psychiatry. 2003 Dec 01; 54(11):1171-80.
    View in: PubMed
    Score: 0.079
  23. Park HJ, Kubicki M, Shenton ME, Guimond A, McCarley RW, Maier SE, Kikinis R, Jolesz FA, Westin CF. Spatial normalization of diffusion tensor MRI using multiple channels. Neuroimage. 2003 Dec; 20(4):1995-2009.
    View in: PubMed
    Score: 0.079
  24. Kubicki M, Westin CF, Maier SE, Mamata H, Frumin M, Ersner-Hershfield H, Kikinis R, Jolesz FA, McCarley R, Shenton ME. Diffusion tensor imaging and its application to neuropsychiatric disorders. Harv Rev Psychiatry. 2002 Nov-Dec; 10(6):324-36.
    View in: PubMed
    Score: 0.073
  25. Kubicki M, Westin CF, Maier SE, Frumin M, Nestor PG, Salisbury DF, Kikinis R, Jolesz FA, McCarley RW, Shenton ME. Uncinate fasciculus findings in schizophrenia: a magnetic resonance diffusion tensor imaging study. Am J Psychiatry. 2002 May; 159(5):813-20.
    View in: PubMed
    Score: 0.070
  26. Rivas-Grajales AM, Savadjiev P, Kubicki M, Nestor PG, Niznikiewicz M, McCarley RW, Westin CF, Shenton ME, Levitt JJ. Striato-nigro-striatal tract dispersion abnormalities in patients with chronic schizophrenia. Brain Imaging Behav. 2019 Oct; 13(5):1236-1245.
    View in: PubMed
    Score: 0.059
  27. Mirzaalian H, Ning L, Savadjiev P, Pasternak O, Bouix S, Michailovich O, Karmacharya S, Grant G, Marx CE, Morey RA, Flashman LA, George MS, McAllister TW, Andaluz N, Shutter L, Coimbra R, Zafonte RD, Coleman MJ, Kubicki M, Westin CF, Stein MB, Shenton ME, Rathi Y. Multi-site harmonization of diffusion MRI data in a registration framework. Brain Imaging Behav. 2018 02; 12(1):284-295.
    View in: PubMed
    Score: 0.052
  28. Mirzaalian H, Ning L, Savadjiev P, Pasternak O, Bouix S, Michailovich O, Grant G, Marx CE, Morey RA, Flashman LA, George MS, McAllister TW, Andaluz N, Shutter L, Coimbra R, Zafonte RD, Coleman MJ, Kubicki M, Westin CF, Stein MB, Shenton ME, Rathi Y. Inter-site and inter-scanner diffusion MRI data harmonization. Neuroimage. 2016 07 15; 135:311-23.
    View in: PubMed
    Score: 0.046
  29. Mirzaalian H, de Pierrefeu A, Savadjiev P, Pasternak O, Bouix S, Kubicki M, Westin CF, Shenton ME, Rathi Y. Harmonizing Diffusion MRI Data Across Multiple Sites and Scanners. Med Image Comput Comput Assist Interv. 2015 Oct; 9349:12-19.
    View in: PubMed
    Score: 0.045
  30. Whitford TJ, Lee SW, Oh JS, de Luis-Garcia R, Savadjiev P, Alvarado JL, Westin CF, Niznikiewicz M, Nestor PG, McCarley RW, Kubicki M, Shenton ME. Localized abnormalities in the cingulum bundle in patients with schizophrenia: a Diffusion Tensor tractography study. Neuroimage Clin. 2014; 5:93-9.
    View in: PubMed
    Score: 0.041
  31. Rathi Y, Pasternak O, Savadjiev P, Michailovich O, Bouix S, Kubicki M, Westin CF, Makris N, Shenton ME. Gray matter alterations in early aging: a diffusion magnetic resonance imaging study. Hum Brain Mapp. 2014 Aug; 35(8):3841-56.
    View in: PubMed
    Score: 0.040
  32. Shenton ME, Hamoda HM, Schneiderman JS, Bouix S, Pasternak O, Rathi Y, Vu MA, Purohit MP, Helmer K, Koerte I, Lin AP, Westin CF, Kikinis R, Kubicki M, Stern RA, Zafonte R. A review of magnetic resonance imaging and diffusion tensor imaging findings in mild traumatic brain injury. Brain Imaging Behav. 2012 Jun; 6(2):137-92.
    View in: PubMed
    Score: 0.035
  33. Venkataraman A, Rathi Y, Kubicki M, Westin CF, Golland P. Joint modeling of anatomical and functional connectivity for population studies. IEEE Trans Med Imaging. 2012 Feb; 31(2):164-82.
    View in: PubMed
    Score: 0.034
  34. Whitford TJ, Savadjiev P, Kubicki M, O'Donnell LJ, Terry DP, Bouix S, Westin CF, Schneiderman JS, Bobrow L, Rausch AC, Niznikiewicz M, Nestor PG, Pantelis C, Wood SJ, McCarley RW, Shenton ME. Fiber geometry in the corpus callosum in schizophrenia: evidence for transcallosal misconnection. Schizophr Res. 2011 Oct; 132(1):69-74.
    View in: PubMed
    Score: 0.033
  35. Rathi Y, Kubicki M, Bouix S, Westin CF, Goldstein J, Seidman L, Mesholam-Gately R, McCarley RW, Shenton ME. Statistical analysis of fiber bundles using multi-tensor tractography: application to first-episode schizophrenia. Magn Reson Imaging. 2011 May; 29(4):507-15.
    View in: PubMed
    Score: 0.032
  36. Levitt JJ, Kubicki M, Nestor PG, Ersner-Hershfield H, Westin CF, Alvarado JL, Kikinis R, Jolesz FA, McCarley RW, Shenton ME. A diffusion tensor imaging study of the anterior limb of the internal capsule in schizophrenia. Psychiatry Res. 2010 Dec 30; 184(3):143-50.
    View in: PubMed
    Score: 0.032
  37. Whitford TJ, Kubicki M, Schneiderman JS, O'Donnell LJ, King R, Alvarado JL, Khan U, Markant D, Nestor PG, Niznikiewicz M, McCarley RW, Westin CF, Shenton ME. Corpus callosum abnormalities and their association with psychotic symptoms in patients with schizophrenia. Biol Psychiatry. 2010 Jul 01; 68(1):70-7.
    View in: PubMed
    Score: 0.031
  38. Venkataraman A, Rathi Y, Kubicki M, Westin CF, Golland P. Joint generative model for fMRI/DWI and its application to population studies. Med Image Comput Comput Assist Interv. 2010; 13(Pt 1):191-9.
    View in: PubMed
    Score: 0.030
  39. Venkataraman A, Kubicki M, Westin CF, Golland P. Robust Feature Selection in Resting-State fMRI Connectivity Based on Population Studies. Conf Comput Vis Pattern Recognit Workshops. 2010; 63-70.
    View in: PubMed
    Score: 0.030
  40. Oh JS, Kubicki M, Rosenberger G, Bouix S, Levitt JJ, McCarley RW, Westin CF, Shenton ME. Thalamo-frontal white matter alterations in chronic schizophrenia: a quantitative diffusion tractography study. Hum Brain Mapp. 2009 Nov; 30(11):3812-25.
    View in: PubMed
    Score: 0.030
  41. Kawashima T, Nakamura M, Bouix S, Kubicki M, Salisbury DF, Westin CF, McCarley RW, Shenton ME. Uncinate fasciculus abnormalities in recent onset schizophrenia and affective psychosis: a diffusion tensor imaging study. Schizophr Res. 2009 May; 110(1-3):119-26.
    View in: PubMed
    Score: 0.028
  42. Lee K, Yoshida T, Kubicki M, Bouix S, Westin CF, Kindlmann G, Niznikiewicz M, Cohen A, McCarley RW, Shenton ME. Increased diffusivity in superior temporal gyrus in patients with schizophrenia: a Diffusion Tensor Imaging study. Schizophr Res. 2009 Mar; 108(1-3):33-40.
    View in: PubMed
    Score: 0.028
  43. Fitzsimmons J, Kubicki M, Smith K, Bushell G, Estepar RS, Westin CF, Nestor PG, Niznikiewicz MA, Kikinis R, McCarley RW, Shenton ME. Diffusion tractography of the fornix in schizophrenia. Schizophr Res. 2009 Jan; 107(1):39-46.
    View in: PubMed
    Score: 0.028
  44. Rosenberger G, Kubicki M, Nestor PG, Connor E, Bushell GB, Markant D, Niznikiewicz M, Westin CF, Kikinis R, J Saykin A, McCarley RW, Shenton ME. Age-related deficits in fronto-temporal connections in schizophrenia: a diffusion tensor imaging study. Schizophr Res. 2008 Jul; 102(1-3):181-8.
    View in: PubMed
    Score: 0.027
  45. Maddah M, Kubicki M, Wells WM, Westin CF, Shenton ME, Grimson WE. Findings in schizophrenia by tract-oriented DT-MRI analysis. Med Image Comput Comput Assist Interv. 2008; 11(Pt 1):917-24.
    View in: PubMed
    Score: 0.026
  46. Gurrera RJ, Nakamura M, Kubicki M, Dickey CC, Niznikiewicz MA, Voglmaier MM, McCarley RW, Shenton ME, Westin CF, Maier SE, Seidman LJ. The uncinate fasciculus and extraversion in schizotypal personality disorder: a diffusion tensor imaging study. Schizophr Res. 2007 Feb; 90(1-3):360-2.
    View in: PubMed
    Score: 0.024
  47. Kuroki N, Kubicki M, Nestor PG, Salisbury DF, Park HJ, Levitt JJ, Woolston S, Frumin M, Niznikiewicz M, Westin CF, Maier SE, McCarley RW, Shenton ME. Fornix integrity and hippocampal volume in male schizophrenic patients. Biol Psychiatry. 2006 Jul 01; 60(1):22-31.
    View in: PubMed
    Score: 0.023
  48. Nakamura M, McCarley RW, Kubicki M, Dickey CC, Niznikiewicz MA, Voglmaier MM, Seidman LJ, Maier SE, Westin CF, Kikinis R, Shenton ME. Fronto-temporal disconnectivity in schizotypal personality disorder: a diffusion tensor imaging study. Biol Psychiatry. 2005 Sep 15; 58(6):468-78.
    View in: PubMed
    Score: 0.022
  49. Park HJ, Westin CF, Kubicki M, Maier SE, Niznikiewicz M, Baer A, Frumin M, Kikinis R, Jolesz FA, McCarley RW, Shenton ME. White matter hemisphere asymmetries in healthy subjects and in schizophrenia: a diffusion tensor MRI study. Neuroimage. 2004 Sep; 23(1):213-23.
    View in: PubMed
    Score: 0.021
  50. Park HJ, Kubicki M, Westin CF, Talos IF, Brun A, Peiper S, Kikinis R, Jolesz FA, McCarley RW, Shenton ME. Method for combining information from white matter fiber tracking and gray matter parcellation. AJNR Am J Neuroradiol. 2004 Sep; 25(8):1318-24.
    View in: PubMed
    Score: 0.021
Connection Strength
The connection strength for co-authors is the sum of the scores for each of their shared publications.

Publication scores are based on many factors, including how long ago they were written and whether the person is a first or senior author.
Funded by the NIH National Center for Advancing Translational Sciences through its Clinical and Translational Science Awards Program, grant number UL1TR002541.