Harvard Catalyst Profiles

Contact, publication, and social network information about Harvard faculty and fellows.

Bruce R. Fischl, Ph.D.

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Other Positions
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Research
research activities and funding
The research activities and funding listed below are automatically derived from NIH ExPORTER and other sources, which might result in incorrect or missing items. Faculty can login to make corrections and additions.
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  1. RF1MH123195 (IGLESIAS GONZALEZ, JUAN EUGENIO) Aug 1, 2020 - Jul 31, 2023
    NIH
    Open-source software for multi-scale mapping of the human brain
    Role: Co-Principal Investigator
  2. R01AG064027 (FISCHL, BRUCE) Apr 15, 2020 - Mar 31, 2025
    NIH
    Deep Learning Algorithms for FreeSurfer
    Role: Principal Investigator
  3. R56AG064027 (FISCHL, BRUCE) Aug 1, 2019 - Apr 14, 2020
    NIH
    Deep Learning Algorithms for FreeSurfer
    Role: Principal Investigator
  4. R42AG062026 (SCHMANSKY, NICHOLAS JOHN) Jul 1, 2019 - May 31, 2022
    NIH
    Unbiased longitudinal neuromorphometry for clinical decision support
    Role: Co-Principal Investigator
  5. R01NS105820 (FISCHL, BRUCE) Dec 1, 2018 - Nov 30, 2023
    NIH
    Segmenting Brain Structures for Neurological Disorders
    Role: Principal Investigator

Bibliographic
selected publications
Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
  1. Hoffmann M, Billot B, Greve DN, Iglesias JE, Fischl B, Dalca AV. SynthMorph: Learning Contrast-Invariant Registration Without Acquired Images. IEEE Trans Med Imaging. 2022 03; 41(3):543-558. PMID: 34587005.
    Citations: 1     Fields:    
  2. Chang S, Varadarajan D, Yang J, Chen IA, Kura S, Magnain C, Augustinack JC, Fischl B, Greve DN, Boas DA, Wang H. Scalable mapping of myelin and neuron density in the human brain with micrometer resolution. Sci Rep. 2022 01 10; 12(1):363. PMID: 35013441.
    Citations:    Fields:    Translation:HumansCells
  3. Liu CJ, Ammon W, Jones RJ, Nolan J, Wang R, Chang S, Frosch MP, Yendiki A, Boas DA, Magnain C, Fischl B, Wang H. Refractive-index matching enhanced polarization sensitive optical coherence tomography quantification in human brain tissue. Biomed Opt Express. 2022 Jan 01; 13(1):358-372. PMID: 35154876.
    Citations:    
  4. Li J, Curley WH, Guerin B, Dougherty DD, Dalca AV, Fischl B, Horn A, Edlow BL. Mapping the subcortical connectivity of the human default mode network. Neuroimage. 2021 12 15; 245:118758. PMID: 34838949.
    Citations: 1     Fields:    Translation:Humans
  5. Casamitjana A, Lorenzi M, Ferraris S, Peter L, Modat M, Stevens A, Fischl B, Vercauteren T, Iglesias JE. Robust joint registration of multiple stains and MRI for multimodal 3D histology reconstruction: Application to the Allen human brain atlas. Med Image Anal. 2022 01; 75:102265. PMID: 34741894.
    Citations:    Fields:    Translation:Humans
  6. Liu CJ, Ammon W, Siless V, Fogarty M, Wang R, Atzeni A, Aganj I, Iglesias JE, Zöllei L, Fischl B, Schmahmann JD, Wang H. Quantification of volumetric morphometry and optical property in the cortex of human cerebellum at micrometer resolution. Neuroimage. 2021 12 01; 244:118627. PMID: 34607020.
    Citations: 1     Fields:    Translation:Humans
  7. Jones R, Maffei C, Augustinack J, Fischl B, Wang H, Bilgic B, Yendiki A. High-fidelity approximation of grid- and shell-based sampling schemes from undersampled DSI using compressed sensing: Post mortem validation. Neuroimage. 2021 12 01; 244:118621. PMID: 34587516.
    Citations: 1     Fields:    Translation:Humans
  8. Greve DN, Billot B, Cordero D, Hoopes A, Hoffmann M, Dalca AV, Fischl B, Iglesias JE, Augustinack JC. A deep learning toolbox for automatic segmentation of subcortical limbic structures from MRI images. Neuroimage. 2021 12 01; 244:118610. PMID: 34571161.
    Citations:    Fields:    Translation:Humans
  9. Aganj I, Fischl B. Multi-Atlas Image Soft Segmentation via Computation of the Expected Label Value. IEEE Trans Med Imaging. 2021 06; 40(6):1702-1710. PMID: 33687840.
    Citations:    Fields:    
  10. Frau-Pascual A, Augustinack J, Varadarajan D, Yendiki A, Salat DH, Fischl B, Aganj I. Conductance-Based Structural Brain Connectivity in Aging and Dementia. Brain Connect. 2021 09; 11(7):566-583. PMID: 34042511.
    Citations: 2     Fields:    Translation:Humans
  11. Iglesias JE, Billot B, Balbastre Y, Tabari A, Conklin J, Gilberto González R, Alexander DC, Golland P, Edlow BL, Fischl B. Joint super-resolution and synthesis of 1 mm isotropic MP-RAGE volumes from clinical MRI exams with scans of different orientation, resolution and contrast. Neuroimage. 2021 08 15; 237:118206. PMID: 34048902.
    Citations: 2     Fields:    Translation:Humans
  12. Sederevicius D, Vidal-Piñeiro D, Sørensen Ø, van Leemput K, Iglesias JE, Dalca AV, Greve DN, Fischl B, Bjørnerud A, Walhovd KB, Fjell AM. Reliability and sensitivity of two whole-brain segmentation approaches included in FreeSurfer - ASEG and SAMSEG. Neuroimage. 2021 08 15; 237:118113. PMID: 33940143.
    Citations: 2     Fields:    Translation:Humans
  13. Nolan AL, Petersen C, Iacono D, Mac Donald CL, Mukherjee P, van der Kouwe A, Jain S, Stevens A, Diamond BR, Wang R, Markowitz AJ, Fischl B, Perl DP, Manley GT, Keene CD, Diaz-Arrastia R, Edlow BL. Tractography-Pathology Correlations in Traumatic Brain Injury: A TRACK-TBI Study. J Neurotrauma. 2021 06 15; 38(12):1620-1631. PMID: 33412995.
    Citations: 3     Fields:    Translation:Humans
  14. Lu H, Kashani AH, Arfanakis K, Caprihan A, DeCarli C, Gold BT, Li Y, Maillard P, Satizabal CL, Stables L, Wang DJJ, Corriveau RA, Singh H, Smith EE, Fischl B, van der Kouwe A, Schwab K, Helmer KG, Greenberg SM. MarkVCID cerebral small vessel consortium: II. Neuroimaging protocols. Alzheimers Dement. 2021 04; 17(4):716-725. PMID: 33480157.
    Citations: