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Steven P. Gygi, Ph.D.

Co-Author

This page shows the publications co-authored by Steven Gygi and Edward Huttlin.
Connection Strength

4.686
  1. The BioPlex Network: A Systematic Exploration of the Human Interactome. Cell. 2015 Jul 16; 162(2):425-440.
    View in: PubMed
    Score: 0.668
  2. A tissue-specific atlas of mouse protein phosphorylation and expression. Cell. 2010 Dec 23; 143(7):1174-89.
    View in: PubMed
    Score: 0.487
  3. Selection of Heating Temperatures Improves the Sensitivity of the Proteome Integral Solubility Alteration Assay. J Proteome Res. 2020 05 01; 19(5):2159-2166.
    View in: PubMed
    Score: 0.232
  4. Full-Featured, Real-Time Database Searching Platform Enables Fast and Accurate Multiplexed Quantitative Proteomics. J Proteome Res. 2020 05 01; 19(5):2026-2034.
    View in: PubMed
    Score: 0.232
  5. Investigation of Proteomic and Phosphoproteomic Responses to Signaling Network Perturbations Reveals Functional Pathway Organizations in Yeast. Cell Rep. 2019 11 12; 29(7):2092-2104.e4.
    View in: PubMed
    Score: 0.225
  6. Compositional Proteomics: Effects of Spatial Constraints on Protein Quantification Utilizing Isobaric Tags. J Proteome Res. 2018 01 05; 17(1):590-599.
    View in: PubMed
    Score: 0.198
  7. BioPlex Display: An Interactive Suite for Large-Scale AP-MS Protein-Protein Interaction Data. J Proteome Res. 2018 01 05; 17(1):722-726.
    View in: PubMed
    Score: 0.196
  8. Architecture of the human interactome defines protein communities and disease networks. Nature. 2017 05 25; 545(7655):505-509.
    View in: PubMed
    Score: 0.190
  9. Neutral Loss Is a Very Common Occurrence in Phosphotyrosine-Containing Peptides Labeled with Isobaric Tags. J Proteome Res. 2017 02 03; 16(2):1069-1076.
    View in: PubMed
    Score: 0.185
  10. Defining the consequences of genetic variation on a proteome-wide scale. Nature. 2016 06 23; 534(7608):500-5.
    View in: PubMed
    Score: 0.178
  11. Erratum: A mass-tolerant database search identifies a large proportion of unassigned spectra in shotgun proteomics as modified peptides. Nat Biotechnol. 2015 Aug; 33(8):882.
    View in: PubMed
    Score: 0.168
  12. A mass-tolerant database search identifies a large proportion of unassigned spectra in shotgun proteomics as modified peptides. Nat Biotechnol. 2015 Jul; 33(7):743-9.
    View in: PubMed
    Score: 0.166
  13. MultiNotch MS3 enables accurate, sensitive, and multiplexed detection of differential expression across cancer cell line proteomes. Anal Chem. 2014 Jul 15; 86(14):7150-8.
    View in: PubMed
    Score: 0.155
  14. Quantitative temporal viromics: an approach to investigate host-pathogen interaction. Cell. 2014 Jun 05; 157(6):1460-1472.
    View in: PubMed
    Score: 0.155
  15. Mass spectrometry based method to increase throughput for kinome analyses using ATP probes. Anal Chem. 2013 May 07; 85(9):4666-74.
    View in: PubMed
    Score: 0.143
  16. Increasing the multiplexing capacity of TMTs using reporter ion isotopologues with isobaric masses. Anal Chem. 2012 Sep 04; 84(17):7469-78.
    View in: PubMed
    Score: 0.137
  17. Evaluation of HCD- and CID-type fragmentation within their respective detection platforms for murine phosphoproteomics. Mol Cell Proteomics. 2011 Dec; 10(12):M111.009910.
    View in: PubMed
    Score: 0.128
  18. Systematic and quantitative assessment of the ubiquitin-modified proteome. Mol Cell. 2011 Oct 21; 44(2):325-40.
    View in: PubMed
    Score: 0.128
  19. A large-scale method to measure absolute protein phosphorylation stoichiometries. Nat Methods. 2011 Jul 03; 8(8):677-83.
    View in: PubMed
    Score: 0.126
  20. Correct interpretation of comprehensive phosphorylation dynamics requires normalization by protein expression changes. Mol Cell Proteomics. 2011 Aug; 10(8):M111.009654.
    View in: PubMed
    Score: 0.125
  21. TMTpro reagents: a set of isobaric labeling mass tags enables simultaneous proteome-wide measurements across 16 samples. Nat Methods. 2020 04; 17(4):399-404.
    View in: PubMed
    Score: 0.058
  22. A Quantitative Tissue-Specific Landscape of Protein Redox Regulation during Aging. Cell. 2020 03 05; 180(5):968-983.e24.
    View in: PubMed
    Score: 0.058
  23. Characterization of Plasmodium falciparum Atypical Kinase PfPK7- Dependent Phosphoproteome. J Proteome Res. 2018 06 01; 17(6):2112-2123.
    View in: PubMed
    Score: 0.051
  24. Quantitative Proteomic Atlas of Ubiquitination and Acetylation in the DNA Damage Response. Mol Cell. 2015 Sep 03; 59(5):867-81.
    View in: PubMed
    Score: 0.041
  25. QIL1 is a novel mitochondrial protein required for MICOS complex stability and cristae morphology. Elife. 2015 May 21; 4.
    View in: PubMed
    Score: 0.041
  26. Proteomic analysis of cap-dependent translation identifies LARP1 as a key regulator of 5'TOP mRNA translation. Genes Dev. 2014 Feb 15; 28(4):357-71.
    View in: PubMed
    Score: 0.038
  27. TIMMDC1/C3orf1 functions as a membrane-embedded mitochondrial complex I assembly factor through association with the MCIA complex. Mol Cell Biol. 2014 Mar; 34(5):847-61.
    View in: PubMed
    Score: 0.037
  28. Global analysis of protein expression and phosphorylation of three stages of Plasmodium falciparum intraerythrocytic development. J Proteome Res. 2013 Sep 06; 12(9):4028-45.
    View in: PubMed
    Score: 0.037
  29. Landscape of the PARKIN-dependent ubiquitylome in response to mitochondrial depolarization. Nature. 2013 Apr 18; 496(7445):372-6.
    View in: PubMed
    Score: 0.036
  30. Gab2 phosphorylation by RSK inhibits Shp2 recruitment and cell motility. Mol Cell Biol. 2013 Apr; 33(8):1657-70.
    View in: PubMed
    Score: 0.035
  31. Phosphorylation of the eukaryotic translation initiation factor 4E-transporter (4E-T) by c-Jun N-terminal kinase promotes stress-dependent P-body assembly. Mol Cell Biol. 2012 Nov; 32(22):4572-84.
    View in: PubMed
    Score: 0.034
Connection Strength
The connection strength for co-authors is the sum of the scores for each of their shared publications.

Publication scores are based on many factors, including how long ago they were written and whether the person is a first or senior author.
Funded by the NIH National Center for Advancing Translational Sciences through its Clinical and Translational Science Awards Program, grant number UL1TR002541.