Harvard Catalyst Profiles

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Simon Keith Warfield, PH.D.

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Research
The research activities and funding listed below are automatically derived from NIH ExPORTER and other sources, which might result in incorrect or missing items. Faculty can login to make corrections and additions.
  1. S10OD025111 (WARFIELD, SIMON K) Mar 6, 2018 - Mar 5, 2019
    NIH
    Acquisition of a Siemens 3T MRI for Research Imaging
    Role: Principal Investigator
  2. R44MH086984 (NEVO, EREZ) Sep 23, 2016 - Aug 31, 2019
    NIH/NIMH
    Prospective/Retrospective Motion Correction System for Motion Robust Pediatric MRI
    Role: Co-Principal Investigator
  3. R01EB019483 (WARFIELD, SIMON K) Jul 1, 2015 - Apr 30, 2019
    NIH/NIBIB
    Improved Motion Robust MRI of Children
    Role: Principal Investigator
  4. R01DK100404 (WARFIELD, SIMON K) Jan 8, 2014 - Dec 31, 2018
    NIH/NIDDK
    Novel MRI Imaging Tools and Software for Assessing Pediatric Crohn's Disease
    Role: Co-Principal Investigator
  5. R01NS079788 (WARFIELD, SIMON K) Aug 1, 2013 - Jul 31, 2018
    NIH/NINDS
    MRI Biomarkers of Patients with Tuberous Sclerosis Complex and Autism
    Role: Principal Investigator
This researcher has shared information about their research resources in the eagle-i Network. To update or add resource records, contact eagle-i@hms.harvard.edu.
Research Imaging Core of Boston Children’s Hospital - Core services (1) and Instruments (3)
Computational Radiology Laboratory (BCH) - Core services (3) and Software (1)

Bibliographic
Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
  1. Waugh JL, Kuster JK, Makhlouf ML, Levenstein JM, Multhaupt-Buell TJ, Warfield SK, Sharma N, Blood AJ. A registration method for improving quantitative assessment in probabilistic diffusion tractography. Neuroimage. 2019 Jan 03; 189:288-306. PMID: 30611874.
    Citations:    Fields:    
  2. Marami B, Scherrer B, Khan S, Afacan O, Prabhu SP, Sahin M, Warfield SK, Gholipour A. Motion-robust diffusion compartment imaging using simultaneous multi-slice acquisition. Magn Reson Med. 2019 May; 81(5):3314-3329. PMID: 30443929.
    Citations:    Fields:    
  3. Lamash Y, Kurugol S, Freiman M, Perez-Rossello JM, Callahan MJ, Bousvaros A, Warfield SK. Curved planar reformatting and convolutional neural network-based segmentation of the small bowel for visualization and quantitative assessment of pediatric Crohn's disease from MRI. J Magn Reson Imaging. 2018 Oct 24. PMID: 30353957.
    Citations:    Fields:    
  4. Peters JM, Prohl A, Kapur K, Nath A, Scherrer B, Clancy S, Prabhu SP, Sahin M, Franz DN, Warfield SK, Krueger DA. Longitudinal Effects of Everolimus on White Matter Diffusion in Tuberous Sclerosis Complex. Pediatr Neurol. 2019 Jan; 90:24-30. PMID: 30424962.
    Citations:    Fields:    
  5. Ortinau CM, Rollins CK, Gholipour A, Yun HJ, Marshall M, Gagoski B, Afacan O, Friedman K, Tworetzky W, Warfield SK, Newburger JW, Inder TE, Grant PE, Im K. Early-Emerging Sulcal Patterns Are Atypical in Fetuses with Congenital Heart Disease. Cereb Cortex. 2018 Oct 01. PMID: 30272144.
    Citations:    Fields:    
  6. Baumer FM, Peters JM, Clancy S, Prohl AK, Prabhu SP, Scherrer B, Jansen FE, Braun KPJ, Sahin M, Stamm A, Warfield SK. Corpus Callosum White Matter Diffusivity Reflects Cumulative Neurological Comorbidity in Tuberous Sclerosis Complex. Cereb Cortex. 2018 Oct 01; 28(10):3665-3672. PMID: 29939236.
    Citations:    Fields:    
  7. Rensonnet G, Scherrer B, Girard G, Jankovski A, Warfield SK, Macq B, Thiran JP, Taquet M. Towards microstructure fingerprinting: Estimation of tissue properties from a dictionary of Monte Carlo diffusion MRI simulations. Neuroimage. 2019 01 01; 184:964-980. PMID: 30282007.
    Citations:    Fields:    
  8. Srivastava S, Scherrer B, Prohl AK, Filip-Dhima R, Kapur K, Kolevzon A, Buxbaum JD, Berry-Kravis E, Soorya L, Thurm A, Powell CM, Bernstein JA, Warfield SK, Sahin M. Volumetric Analysis of the Basal Ganglia and Cerebellar Structures in Patients with Phelan-McDermid Syndrome. Pediatr Neurol. 2019 Jan; 90:37-43. PMID: 30396833.
    Citations:    Fields:    
  9. Lamash Y, Kurugol S, Warfield SK. Semi-Automated Extraction of Crohns Disease MR Imaging Markers using a 3D Residual CNN with Distance Prior. Deep Learn Med Image Anal Multimodal Learn Clin Decis Support (2018). 2018 Sep; 11045:218-226. PMID: 30450491.
    Citations:    
  10. Sourati J, Gholipour A, Dy JG, Kurugol S, Warfield SK. Active Deep Learning with Fisher Information for Patch-wise Semantic Segmentation. Deep Learn Med Image Anal Multimodal Learn Clin Decis Support (2018). 2018 Sep; 11045:83-91. PMID: 30450490.
    Citations:    
  11. Commowick O, Istace A, Kain M, Laurent B, Leray F, Simon M, Pop SC, Girard P, Améli R, Ferré JC, Kerbrat A, Tourdias T, Cervenansky F, Glatard T, Beaumont J, Doyle S, Forbes F, Knight J, Khademi A, Mahbod A, Wang C, McKinley R, Wagner F, Muschelli J, Sweeney E, Roura E, Lladó X, Santos MM, Santos WP, Silva-Filho AG, Tomas-Fernandez X, Urien H, Bloch I, Valverde S, Cabezas M, Vera-Olmos FJ, Malpica N, Guttmann C, Vukusic S, Edan G, Dojat M, Styner M, Warfield SK, Cotton F, Barillot C. Objective Evaluation of Multiple Sclerosis Lesion Segmentation using a Data Management and Processing Infrastructure. Sci Rep. 2018 Sep 12; 8(1):13650. PMID: 30209345.
    Citations:    Fields:    
  12. Khan S, Vasung L, Marami B, Rollins CK, Afacan O, Ortinau CM, Yang E, Warfield SK, Gholipour A. Fetal brain growth portrayed by a spatiotemporal diffusion tensor MRI atlas computed from in utero images. Neuroimage. 2019 01 15; 185:593-608. PMID: 30172006.
    Citations:    Fields:    
  13. Wallace TE, Afacan O, Waszak M, Kober T, Warfield SK. Head motion measurement and correction using FID navigators. Magn Reson Med. 2019 Jan; 81(1):258-274. PMID: 30058216.
    Citations:    Fields:    
  14. Alexander B, Kelly CE, Adamson C, Beare R, Zannino D, Chen J, Murray AL, Loh WY, Matthews LG, Warfield SK, Anderson PJ, Doyle LW, Seal ML, Spittle AJ, Cheong JLY, Thompson DK. Changes in neonatal regional brain volume associated with preterm birth and perinatal factors. Neuroimage. 2019 01 15; 185:654-663. PMID: 30016676.
    Citations:    Fields:    
  15. Benjamin CFA, Dhingra I, Li AX, Blumenfeld H, Alkawadri R, Bickel S, Helmstaedter C, Meletti S, Bronen RA, Warfield SK, Peters JM, Reutens D, Polczynska MM, Hirsch LJ, Spencer DD. Presurgical language fMRI: Technical practices in epilepsy surgical planning. Hum Brain Mapp. 2018 10; 39(10):4032-4042. PMID: 29962111.
    Citations: 2     Fields:    
  16. Haghighi M, Warfield SK, Kurugol S. AUTOMATIC RENAL SEGMENTATION IN DCE-MRI USING CONVOLUTIONAL NEURAL NETWORKS. Proc IEEE Int Symp Biomed Imaging. 2018 Apr; 2018:1534-1537. PMID: 30473744.
    Citations:    
  17. Martinot AJ, Abbink P, Afacan O, Prohl AK, Bronson R, Hecht JL, Borducchi EN, Larocca RA, Peterson RL, Rinaldi W, Ferguson M, Didier PJ, Weiss D, Lewis MG, De La Barrera RA, Yang E, Warfield SK, Barouch DH. Fetal Neuropathology in Zika Virus-Infected Pregnant Female Rhesus Monkeys. Cell. 2018 05 17; 173(5):1111-1122.e10. PMID: 29606355.
    Citations: 2     Fields:    
  18. Srivastava S, Prohl AK, Scherrer B, Kapur K, Krueger DA, Warfield SK, Sahin M. Cerebellar volume as an imaging marker of development in infants with tuberous sclerosis complex. Neurology. 2018 Apr 24; 90(17):e1493-e1500. PMID: 29572283.
    Citations:    Fields:    
  19. Benjamin CFA, Li AX, Blumenfeld H, Constable RT, Alkawadri R, Bickel S, Helmstaedter C, Meletti S, Bronen R, Warfield SK, Peters JM, Reutens D, Polczynska M, Spencer DD, Hirsch LJ. Presurgical language fMRI: Clinical practices and patient outcomes in epilepsy surgical planning. Hum Brain Mapp. 2018 07; 39(7):2777-2785. PMID: 29528160.
    Citations:    Fields:    
  20. Monson BB, Eaton-Rosen Z, Kapur K, Liebenthal E, Brownell A, Smyser CD, Rogers CE, Inder TE, Warfield SK, Neil JJ. Differential Rates of Perinatal Maturation of Human Primary and Nonprimary Auditory Cortex. eNeuro. 2018 Jan-Feb; 5(1). PMID: 29354680.
    Citations: 2     Fields:    Translation:Humans
  21. Velasco-Annis C, Akhondi-Asl A, Stamm A, Warfield SK. Reproducibility of Brain MRI Segmentation Algorithms: Empirical Comparison of Local MAP PSTAPLE, FreeSurfer, and FSL-FIRST. J Neuroimaging. 2018 Mar; 28(2):162-172. PMID: 29134725.
    Citations:    Fields:    
  22. Kurugol S, Marami B, Afacan O, Warfield SK, Gholipour A. Motion-Robust Spatially Constrained Parameter Estimation in Renal Diffusion-Weighted MRI by 3D Motion Tracking and Correction of Sequential Slices. Mol Imaging Reconstr Anal Mov Body Organs Stroke Imaging Treat (2017). 2017; 10555:75-85. PMID: 29457154.
    Citations: 1     
  23. Eaton-Rosen Z, Scherrer B, Melbourne A, Ourselin S, Neil JJ, Warfield SK. Investigating the maturation of microstructure and radial orientation in the preterm human cortex with diffusion MRI. Neuroimage. 2017 11 15; 162:65-72. PMID: 28801253.
    Citations: 1     Fields:    Translation:Humans
  24. Rensonnet G, Scherrer B, Warfield SK, Macq B, Taquet M. Assessing the validity of the approximation of diffusion-weighted-MRI signals from crossing fascicles by sums of signals from single fascicles. Magn Reson Med. 2018 04; 79(4):2332-2345. PMID: 28714064.
    Citations:    Fields:    
  25. Hyde DE, Tomas-Fernandez X, Stone SS, Peters J, Warfield SK. Localization of stereo-electroencephalography signals using a finite difference complete electrode model. Conf Proc IEEE Eng Med Biol Soc. 2017 07; 2017:3600-3603. PMID: 29060677.
    Citations:    Fields:    Translation:Humans
  26. Ferizi U, Scherrer B, Schneider T, Alipoor M, Eufracio O, Fick RHJ, Deriche R, Nilsson M, Loya-Olivas AK, Rivera M, Poot DHJ, Ramirez-Manzanares A, Marroquin JL, Rokem A, Pötter C, Dougherty RF, Sakaie K, Wheeler-Kingshott C, Warfield SK, Witzel T, Wald LL, Raya JG, Alexander DC. Diffusion MRI microstructure models with in vivo human brain Connectome data: results from a multi-group comparison. NMR Biomed. 2017 Sep; 30(9). PMID: 28643354.
    Citations: 2     Fields:    Translation:Humans
  27. Kurugol S, Freiman M, Afacan O, Domachevsky L, Perez-Rossello JM, Callahan MJ, Warfield SK. Motion-robust parameter estimation in abdominal diffusion-weighted MRI by simultaneous image registration and model estimation. Med Image Anal. 2017 Jul; 39:124-132. PMID: 28494271.
    Citations: 1     Fields:    Translation:Humans
  28. Marami B, Mohseni Salehi SS, Afacan O, Scherrer B, Rollins CK, Yang E, Estroff JA, Warfield SK, Gholipour A. Temporal slice registration and robust diffusion-tensor reconstruction for improved fetal brain structural connectivity analysis. Neuroimage. 2017 08 01; 156:475-488. PMID: 28433624.
    Citations: 4     Fields:    Translation:Humans
  29. Tourbier S, Velasco-Annis C, Taimouri V, Hagmann P, Meuli R, Warfield SK, Bach Cuadra M, Gholipour A. Automated template-based brain localization and extraction for fetal brain MRI reconstruction. Neuroimage. 2017 07 15; 155:460-472. PMID: 28408290.
    Citations: 2     Fields:    Translation:Humans
  30. Jacobson SW, Jacobson JL, Molteno CD, Warton CMR, Wintermark P, Hoyme HE, De Jong G, Taylor P, Warton F, Lindinger NM, Carter RC, Dodge NC, Grant E, Warfield SK, Zöllei L, van der Kouwe AJW, Meintjes EM. Heavy Prenatal Alcohol Exposure is Related to Smaller Corpus Callosum in Newborn MRI Scans. Alcohol Clin Exp Res. 2017 May; 41(5):965-975. PMID: 28247416.
    Citations: 5     Fields:    Translation:Humans
  31. Hesper T, Bulat E, Bixby S, Akhondi-Asl A, Afacan O, Miller P, Bowen G, Warfield S, Kim YJ. Both 3-T dGEMRIC and Acetabular-Femoral T2 Difference May Detect Cartilage Damage at the Chondrolabral Junction. Clin Orthop Relat Res. 2017 Apr; 475(4):1058-1065. PMID: 27807678.
    Citations: 2     Fields:    Translation:Humans
  32. Gholipour A, Rollins CK, Velasco-Annis C, Ouaalam A, Akhondi-Asl A, Afacan O, Ortinau CM, Clancy S, Limperopoulos C, Yang E, Estroff JA, Warfield SK. A normative spatiotemporal MRI atlas of the fetal brain for automatic segmentation and analysis of early brain growth. Sci Rep. 2017 03 28; 7(1):476. PMID: 28352082.
    Citations: 4     Fields:    Translation:Humans
  33. Sánchez Fernández I, Peters JM, Akhondi-Asl A, Klehm J, Warfield SK, Loddenkemper T. Reduced thalamic volume in patients with Electrical Status Epilepticus in Sleep. Epilepsy Res. 2017 02; 130:74-80. PMID: 28160673.
    Citations:    Fields:    Translation:Humans
  34. Jia Y, Gholipour A, He Z, Warfield SK. A New Sparse Representation Framework for Reconstruction of an Isotropic High Spatial Resolution MR Volume From Orthogonal Anisotropic Resolution Scans. IEEE Trans Med Imaging. 2017 05; 36(5):1182-1193. PMID: 28129152.
    Citations:    Fields:    Translation:Humans
  35. Carass A, Roy S, Jog A, Cuzzocreo JL, Magrath E, Gherman A, Button J, Nguyen J, Prados F, Sudre CH, Jorge Cardoso M, Cawley N, Ciccarelli O, Wheeler-Kingshott CAM, Ourselin S, Catanese L, Deshpande H, Maurel P, Commowick O, Barillot C, Tomas-Fernandez X, Warfield SK, Vaidya S, Chunduru A, Muthuganapathy R, Krishnamurthi G, Jesson A, Arbel T, Maier O, Handels H, Iheme LO, Unay D, Jain S, Sima DM, Smeets D, Ghafoorian M, Platel B, Birenbaum A, Greenspan H, Bazin PL, Calabresi PA, Crainiceanu CM, Ellingsen LM, Reich DS, Prince JL, Pham DL. Longitudinal multiple sclerosis lesion segmentation: Resource and challenge. Neuroimage. 2017 03 01; 148:77-102. PMID: 28087490.
    Citations: 6     Fields:    Translation:Humans
  36. Hedouin R, Commowick O, Bannier E, Scherrer B, Taquet M, Warfield SK, Barillot C. Block-Matching Distortion Correction of Echo-Planar Images With Opposite Phase Encoding Directions. IEEE Trans Med Imaging. 2017 05; 36(5):1106-1115. PMID: 28092527.
    Citations: 1     Fields:    Translation:Humans
  37. Rollins CK, Asaro LA, Akhondi-Asl A, Kussman BD, Rivkin MJ, Bellinger DC, Warfield SK, Wypij D, Newburger JW, Soul JS. White Matter Volume Predicts Language Development in Congenital Heart Disease. J Pediatr. 2017 02; 181:42-48.e2. PMID: 27837950.
    Citations: 1     Fields:    Translation:Humans
  38. Alexander B, Murray AL, Loh WY, Matthews LG, Adamson C, Beare R, Chen J, Kelly CE, Rees S, Warfield SK, Anderson PJ, Doyle LW, Spittle AJ, Cheong JLY, Seal ML, Thompson DK. A new neonatal cortical and subcortical brain atlas: the Melbourne Children's Regional Infant Brain (M-CRIB) atlas. Neuroimage. 2017 02 15; 147:841-851. PMID: 27725314.
    Citations:    Fields:    Translation:Humans
  39. Marami B, Scherrer B, Afacan O, Warfield SK, Gholipour A. Motion-Robust Reconstruction based on Simultaneous Multi-Slice Registration for Diffusion-Weighted MRI of Moving Subjects. Med Image Comput Comput Assist Interv. 2016 Oct; 9902:544-552. PMID: 28127590.
    Citations: 2     Fields:    Translation:Humans
  40. Marami B, Scherrer B, Afacan O, Erem B, Warfield SK, Gholipour A. Motion-Robust Diffusion-Weighted Brain MRI Reconstruction Through Slice-Level Registration-Based Motion Tracking. IEEE Trans Med Imaging. 2016 10; 35(10):2258-2269. PMID: 27834639.
    Citations: 4     Fields:    Translation:Humans
  41. Chamberland M, Scherrer B, Prabhu SP, Madsen J, Fortin D, Whittingstall K, Descoteaux M, Warfield SK. Active delineation of Meyer's loop using oriented priors through MAGNEtic tractography (MAGNET). Hum Brain Mapp. 2017 01; 38(1):509-527. PMID: 27647682.
    Citations: 4     Fields:    Translation:HumansCells
  42. Kinney HC, Poduri AH, Cryan JB, Haynes RL, Teot L, Sleeper LA, Holm IA, Berry GT, Prabhu SP, Warfield SK, Brownstein C, Abram HS, Kruer M, Kemp WL, Hargitai B, Gastrang J, Mena OJ, Haas EA, Dastjerdi R, Armstrong DD, Goldstein RD. Hippocampal Formation Maldevelopment and Sudden Unexpected Death across the Pediatric Age Spectrum. J Neuropathol Exp Neurol. 2016 Oct; 75(10):981-997. PMID: 27612489.
    Citations:    
  43. Afacan O, Erem B, Roby DP, Roth N, Roth A, Prabhu SP, Warfield SK. Evaluation of motion and its effect on brain magnetic resonance image quality in children. Pediatr Radiol. 2016 Nov; 46(12):1728-1735. PMID: 27488508.
    Citations: 1     Fields:    Translation:Humans
  44. Erem B, Hyde DE, Peters JM, Duffy FH, Warfield SK. Dynamic Electrical Source Imaging (DESI) of Seizures and Interictal Epileptic Discharges Without Ensemble Averaging. IEEE Trans Med Imaging. 2017 01; 36(1):98-110. PMID: 27479957.
    Citations:    Fields:    Translation:Humans
  45. Hyde DE, Dannhauer M, Warfield SK, MacLeod R, Brooks DH. Evaluation of Numerical Techniques for Solving the Current Injection Problem in Biological Tissues. Proc IEEE Int Symp Biomed Imaging. 2016 Apr; 2016:876-880. PMID: 28479960.
    Citations:    
  46. Afacan O, Gholipour A, Mulkern RV, Barnewolt CE, Estroff JA, Connolly SA, Parad RB, Bairdain S, Warfield SK. Fetal lung apparent diffusion coefficient measurement using diffusion-weighted MRI at 3 Tesla: Correlation with gestational age. J Magn Reson Imaging. 2016 12; 44(6):1650-1655. PMID: 27159847.
    Citations: 1     Fields:    Translation:HumansCells
  47. Erem B, Martinez Orellana R, Hyde DE, Peters JM, Duffy FH, Stovicek P, Warfield SK, MacLeod RS, Tadmor G, Brooks DH. Extensions to a manifold learning framework for time-series analysis on dynamic manifolds in bioelectric signals. Phys Rev E. 2016 04; 93(4):042218. PMID: 27176304.
    Citations: 4     Fields:    Translation:Humans
  48. Marami B, Scherrer B, Afacan O, Erem B, Warfield S, Gholipour A. Motion-robust diffusion-weighted brain MRI reconstruction through slice-level registration-based motion tracking. IEEE Trans Med Imaging. 2016 Apr 20. PMID: 28113889.
    Citations:    
  49. Kurugol S, Freiman M, Afacan O, Perez-Rossello JM, Callahan MJ, Warfield SK. Spatially-constrained probability distribution model of incoherent motion (SPIM) for abdominal diffusion-weighted MRI. Med Image Anal. 2016 08; 32:173-83. PMID: 27111049.
    Citations: 3     Fields:    Translation:Humans
  50. Pier DB, Gholipour A, Afacan O, Velasco-Annis C, Clancy S, Kapur K, Estroff JA, Warfield SK. 3D Super-Resolution Motion-Corrected MRI: Validation of Fetal Posterior Fossa Measurements. J Neuroimaging. 2016 09; 26(5):539-44. PMID: 26990618; PMCID: PMC4983257.
    Citations:    Fields:    Translation:Humans
  51. Bulat E, Bixby SD, Siversson C, Kalish LA, Warfield SK, Kim YJ. Planar dGEMRIC Maps May Aid Imaging Assessment of Cartilage Damage in Femoroacetabular Impingement. Clin Orthop Relat Res. 2016 Feb; 474(2):467-78. PMID: 26304042; PMCID: PMC4709317.
    Citations: 4     Fields:    Translation:Humans
  52. Gholipour A, Afacan O, Aganj I, Scherrer B, Prabhu SP, Sahin M, Warfield SK. Super-resolution reconstruction in frequency, image, and wavelet domains to reduce through-plane partial voluming in MRI. Med Phys. 2015 Dec; 42(12):6919-32. PMID: 26632048; PMCID: PMC4644155.
    Citations: 2     Fields:    Translation:Humans
  53. Stamm A, Singh J, Afacan O, Warfield SK. Analytic quantification of bias and variance of coil sensitivity profile estimators for improved image reconstruction in MRI. Med Image Comput Comput Assist Interv. 2015 Oct; 9350:684-691. PMID: 28553674.
    Citations:    Fields:    
  54. Akhondi-Asl A, Afacan O, Balasubramanian M, Mulkern RV, Warfield SK. Fast myelin water fraction estimation using 2D multislice CPMG. Magn Reson Med. 2016 10; 76(4):1301-13. PMID: 26536382.
    Citations: 3     Fields:    Translation:HumansCells
  55. Taquet M, Scherrer B, Boumal N, Peters JM, Macq B, Warfield SK. Improved fidelity of brain microstructure mapping from single-shell diffusion MRI. Med Image Anal. 2015 Dec; 26(1):268-86. PMID: 26529580.
    Citations: 2     Fields:    Translation:Humans
  56. Peters JM, Prohl AK, Tomas-Fernandez XK, Taquet M, Scherrer B, Prabhu SP, Lidov HG, Singh JM, Jansen FE, Braun KP, Sahin M, Warfield SK, Stamm A. Tubers are neither static nor discrete: Evidence from serial diffusion tensor imaging. Neurology. 2015 Nov 03; 85(18):1536-45. PMID: 26432846; PMCID: PMC4642145.
    Citations: 4     Fields:    Translation:Humans
  57. Scherrer B, Schwartzman A, Taquet M, Sahin M, Prabhu SP, Warfield SK. Characterizing brain tissue by assessment of the distribution of anisotropic microstructural environments in diffusion-compartment imaging (DIAMOND). Magn Reson Med. 2016 09; 76(3):963-77. PMID: 26362832.
    Citations: 11     Fields:    Translation:HumansAnimals
  58. Wintermark P, Lechpammer M, Kosaras B, Jensen FE, Warfield SK. Brain Perfusion Is Increased at Term in the White Matter of Very Preterm Newborns and Newborns with Congenital Heart Disease: Does this Reflect Activated Angiogenesis? Neuropediatrics. 2015 Oct; 46(5):344-51. PMID: 26340765.
    Citations: 4     Fields:    Translation:Humans
  59. Jia Y, He Z, Gholipour A, Warfield SK. Single Anisotropic 3-D MR Image Upsampling via Overcomplete Dictionary Trained From In-Plane High Resolution Slices. IEEE J Biomed Health Inform. 2016 11; 20(6):1552-1561. PMID: 26302522.
    Citations: 1     Fields:    Translation:Humans
  60. Gorthi S, Akhondi-Asl A, Warfield SK. Optimal MAP Parameters Estimation in STAPLE Using Local Intensity Similarity Information. IEEE J Biomed Health Inform. 2015 Sep; 19(5):1589-97. PMID: 25955854; PMCID: PMC4587381.
    Citations:    Fields:    Translation:Humans
  61. Taimouri V, Afacan O, Perez-Rossello JM, Callahan MJ, Mulkern RV, Warfield SK, Freiman M. Spatially constrained incoherent motion method improves diffusion-weighted MRI signal decay analysis in the liver and spleen. Med Phys. 2015 Apr; 42(4):1895-903. PMID: 25832079; PMCID: PMC4376755.
    Citations: 2     Fields:    Translation:HumansCells
  62. Erem B, Hyde DE, Peters JM, Duffy FH, Brooks DH, Warfield SK. COMBINED DELAY AND GRAPH EMBEDDING OF EPILEPTIC DISCHARGES IN EEG REVEALS COMPLEX AND RECURRENT NONLINEAR DYNAMICS. Proc IEEE Int Symp Biomed Imaging. 2015 Apr; 2015:347-350. PMID: 26366250.
    Citations: 2     
  63. Im K, Ahtam B, Haehn D, Peters JM, Warfield SK, Sahin M, Ellen Grant P. Altered Structural Brain Networks in Tuberous Sclerosis Complex. Cereb Cortex. 2016 May; 26(5):2046-58. PMID: 25750257; PMCID: PMC4830286.
    Citations: 3     Fields:    Translation:Humans
  64. Velasco-Annis C, Gholipour A, Afacan O, Prabhu SP, Estroff JA, Warfield SK. Normative biometrics for fetal ocular growth using volumetric MRI reconstruction. Prenat Diagn. 2015 Apr; 35(4):400-8. PMID: 25601041; PMCID: PMC4390455.
    Citations: 2     Fields:    Translation:Humans
  65. Shaikh H, Lechpammer M, Jensen FE, Warfield SK, Hansen AH, Kosaras B, Shevell M, Wintermark P. Increased Brain Perfusion Persists over the First Month of Life in Term Asphyxiated Newborns Treated with Hypothermia: Does it Reflect Activated Angiogenesis? Transl Stroke Res. 2015 Jun; 6(3):224-33. PMID: 25620793.
    Citations: 5     Fields:    Translation:HumansAnimalsCells
  66. Tomas-Fernandez X, Warfield SK. A Model of Population and Subject (MOPS) Intensities With Application to Multiple Sclerosis Lesion Segmentation. IEEE Trans Med Imaging. 2015 Jun; 34(6):1349-61. PMID: 25616008; PMCID: PMC4506921.
    Citations: 5     Fields:    Translation:Humans
  67. Scherrer B, Afacan O, Taquet M, Prabhu SP, Gholipour A, Warfield SK. Accelerated High Spatial Resolution Diffusion-Weighted Imaging. Inf Process Med Imaging. 2015; 24:69-81. PMID: 26167096; PMCID: PMC4495974.
    Citations: 2     Fields:    Translation:Humans
  68. Kurugol S, Freiman M, Afacan O, Domachevsky L, Perez-Rossello JM, Callahan MJ, Warfield SK. Motion Compensated Abdominal Diffusion Weighted MRI by Simultaneous Image Registration and Model Estimation (SIR-ME). Med Image Comput Comput Assist Interv. 2015; 9351:501-9. PMID: 26550612.
    Citations: 2     Fields:    Translation:Humans
  69. Gholipour A, Lee EY, Warfield SK. The anatomy and art of writing a successful grant application: a practical step-by-step approach. Pediatr Radiol. 2014 Dec; 44(12):1512-7. PMID: 25408133.
    Citations: 1     Fields:    Translation:Humans
  70. Gholipour A, Estroff JA, Barnewolt CE, Robertson RL, Grant PE, Gagoski B, Warfield SK, Afacan O, Connolly SA, Neil JJ, Wolfberg A, Mulkern RV. Fetal MRI: A Technical Update with Educational Aspirations. Concepts Magn Reson Part A Bridg Educ Res. 2014 Nov; 43(6):237-266. PMID: 26225129.
    Citations: 12     
  71. Siversson C, Akhondi-Asl A, Bixby S, Kim YJ, Warfield SK. Three-dimensional hip cartilage quality assessment of morphology and dGEMRIC by planar maps and automated segmentation. Osteoarthritis Cartilage. 2014 Oct; 22(10):1511-5. PMID: 25278060; PMCID: PMC4404159.
    Citations: 6     Fields:    Translation:Humans
  72. Suarez RO, Taimouri V, Boyer K, Vega C, Rotenberg A, Madsen JR, Loddenkemper T, Duffy FH, Prabhu SP, Warfield SK. Passive fMRI mapping of language function for pediatric epilepsy surgical planning: validation using Wada, ECS, and FMAER. Epilepsy Res. 2014 Dec; 108(10):1874-88. PMID: 25445239; PMCID: PMC4254568.
    Citations: 5     Fields:    Translation:Humans
  73. Hyde DE, Duffy FH, Warfield SK. Voxel-based dipole orientation constraints for distributed current estimation. IEEE Trans Biomed Eng. 2014 Jul; 61(7):2028-40. PMID: 24951674; PMCID: PMC4203378.
    Citations: 1     Fields:    Translation:Humans
  74. Akhondi-Asl A, Hoyte L, Lockhart ME, Warfield SK. A logarithmic opinion pool based STAPLE algorithm for the fusion of segmentations with associated reliability weights. IEEE Trans Med Imaging. 2014 Oct; 33(10):1997-2009. PMID: 24951681; PMCID: PMC4264575.
    Citations: 9     Fields:    Translation:Humans
  75. Hunold A, Haueisen J, Ahtam B, Doshi C, Harini C, Camposano S, Warfield SK, Grant PE, Okada Y, Papadelis C. Localization of the epileptogenic foci in tuberous sclerosis complex: a pediatric case report. Front Hum Neurosci. 2014; 8:175. PMID: 24723876; PMCID: PMC3972469.
    Citations: 7     
  76. Garlapati RR, Roy A, Joldes GR, Wittek A, Mostayed A, Doyle B, Warfield SK, Kikinis R, Knuckey N, Bunt S, Miller K. More accurate neuronavigation data provided by biomechanical modeling instead of rigid registration. J Neurosurg. 2014 Jun; 120(6):1477-83. PMID: 24460486; PMCID: PMC4386882.
    Citations: 9     Fields:    Translation:Humans
  77. Akhondi-Asl A, Afacan O, Mulkern RV, Warfield SK. T(2)-relaxometry for myelin water fraction extraction using wald distribution and extended phase graph. Med Image Comput Comput Assist Interv. 2014; 17(Pt 3):145-52. PMID: 25320793; PMCID: PMC4209472.
    Citations: 4     Fields:    Translation:HumansCells
  78. Taquet M, Scherrer B, Peters JM, Prabhu SP, Warfield SK. A fully Bayesian inference framework for population studies of the brain microstructure. Med Image Comput Comput Assist Interv. 2014; 17(Pt 1):25-32. PMID: 25333097; PMCID: PMC4209905.
    Citations: 2     Fields:    Translation:HumansCells
  79. Gholipour A, Limperopoulos C, Clancy S, Clouchoux C, Akhondi-Asl A, Estroff JA, Warfield SK. Construction of a deformable spatiotemporal MRI atlas of the fetal brain: evaluation of similarity metrics and deformation models. Med Image Comput Comput Assist Interv. 2014; 17(Pt 2):292-9. PMID: 25485391; PMCID: PMC4260809.
    Citations: 8     Fields:    Translation:Humans
  80. Thompson DK, Lee KJ, Egan GF, Warfield SK, Doyle LW, Anderson PJ, Inder TE. Regional white matter microstructure in very preterm infants: predictors and 7 year outcomes. Cortex. 2014 Mar; 52:60-74. PMID: 24405815; PMCID: PMC3955713.
    Citations: 22     Fields:    Translation:HumansCells
  81. Taquet M, Scherrer B, Commowick O, Peters JM, Sahin M, Macq B, Warfield SK. A mathematical framework for the registration and analysis of multi-fascicle models for population studies of the brain microstructure. IEEE Trans Med Imaging. 2014 Feb; 33(2):504-17. PMID: 24235301; PMCID: PMC3984609.
    Citations: 11