Harvard Catalyst Profiles

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James Arthur Davey, Ph.D.

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Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
  1. Davey JA, Wilson CJ. Engineered signal-coupled inducible promoters: measuring the apparent RNA-polymerase resource budget. Nucleic Acids Res. 2020 09 25; 48(17):9995-10012. PMID: 32890400; PMCID: PMC7515704.
    Citations: 3     Fields:    Translation:Cells
  2. Davey JA, Damry AM, Goto NK, Chica RA. Rational design of proteins that exchange on functional timescales. Nat Chem Biol. 2017 Dec; 13(12):1280-1285. PMID: 29058725.
    Citations: 34     Fields:    Translation:Cells
  3. Davey JA, Wilson CJ. Deconstruction of complex protein signaling switches: a roadmap toward engineering higher-order gene regulators. Wiley Interdiscip Rev Nanomed Nanobiotechnol. 2017 11; 9(6). PMID: 28185424.
    Citations: 1     Fields:    Translation:Cells
  4. Davey JA, Chica RA. Multistate Computational Protein Design with Backbone Ensembles. Methods Mol Biol. 2017; 1529:161-179. PMID: 27914050.
    Citations: 10     Fields:    Translation:Cells
  5. Davey JA, Chica RA. Turning a Negative into a Positive: Conversion of a Homodimer into a Heterodimer Using Negative State Repertoires. Structure. 2016 Apr 05; 24(4):496-497. PMID: 27050684.
    Citations: 1     Fields:    Translation:Cells
  6. Pandelieva AT, Baran MJ, Calderini GF, McCann JL, Tremblay V, Sarvan S, Davey JA, Couture JF, Chica RA. Brighter Red Fluorescent Proteins by Rational Design of Triple-Decker Motif. ACS Chem Biol. 2016 Feb 19; 11(2):508-17. PMID: 26697759.
    Citations: 6     Fields:    Translation:AnimalsCells
  7. Hari TP, Wilke BI, Davey JA, Boddy CN. Diastereoseletive Transannular Oxa-Conjugate Addition Generates the 2,6-cis-Disubstituted Tetrahydropyran of Neopeltolide. J Org Chem. 2016 Jan 15; 81(2):415-23. PMID: 26675500.
    Citations: 2     Fields:    
  8. Davey JA, Damry AM, Euler CK, Goto NK, Chica RA. Prediction of Stable Globular Proteins Using Negative Design with Non-native Backbone Ensembles. Structure. 2015 Nov 03; 23(11):2011-21. PMID: 26412333.
    Citations: 10     Fields:    Translation:Cells
  9. Davey JA, Chica RA. Optimization of rotamers prior to template minimization improves stability predictions made by computational protein design. Protein Sci. 2015 Apr; 24(4):545-60. PMID: 25492709; PMCID: PMC4380985.
    Citations: 5     Fields:    Translation:Cells
  10. Lanouette S, Davey JA, Elisma F, Ning Z, Figeys D, Chica RA, Couture JF. Discovery of substrates for a SET domain lysine methyltransferase predicted by multistate computational protein design. Structure. 2015 Jan 06; 23(1):206-215. PMID: 25533488.
    Citations: 13     Fields:    Translation:HumansCells
  11. Davey JA, Chica RA. Improving the accuracy of protein stability predictions with multistate design using a variety of backbone ensembles. Proteins. 2014 May; 82(5):771-84. PMID: 24174277.
    Citations: 22     Fields:    Translation:Cells
  12. Davey JA, Chica RA. Multistate approaches in computational protein design. Protein Sci. 2012 Sep; 21(9):1241-52. PMID: 22811394; PMCID: PMC3631354.
    Citations: 23     Fields:    Translation:HumansAnimalsCells
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Funded by the NIH National Center for Advancing Translational Sciences through its Clinical and Translational Science Awards Program, grant number UL1TR002541.