Harvard Catalyst Profiles

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Alexandra Berroyer, Ph.D.

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Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
  1. Berroyer A, Bacolla A, Tainer JA, Kim N. Cleavage-defective Topoisomerase I mutants sharply increase G-quadruplex-associated genomic instability. Microb Cell. 2022 Mar 07; 9(3):52-68. PMID: 35291312; PMCID: PMC8890623.
  2. Stokdyk K, Berroyer A, Grami ZA, Kim N. The activity of yeast Apn2 AP endonuclease at uracil-derived AP sites is dependent on the major carbon source. Curr Genet. 2021 Apr; 67(2):283-294. PMID: 33386486; PMCID: PMC8035244.
    Citations:    Fields:    Translation:HumansAnimalsCells
  3. Singh S, Berroyer A, Kim M, Kim N. Yeast Nucleolin Nsr1 Impedes Replication and Elevates Genome Instability at an Actively Transcribed Guanine-Rich G4 DNA-Forming Sequence. Genetics. 2020 12; 216(4):1023-1037. PMID: 33106247; PMCID: PMC7768239.
    Citations: 2     Fields:    Translation:AnimalsCells
  4. Williams JD, Houserova D, Johnson BR, Dyniewski B, Berroyer A, French H, Barchie AA, Bilbrey DD, Demeis JD, Ghee KR, Hughes AG, Kreitz NW, McInnis CH, Pudner SC, Reeves MN, Stahly AN, Turcu A, Watters BC, Daly GT, Langley RJ, Gillespie MN, Prakash A, Larson ED, Kasukurthi MV, Huang J, Jinks-Robertson S, Borchert GM. Characterization of long G4-rich enhancer-associated genomic regions engaging in a novel loop:loop 'G4 Kissing' interaction. Nucleic Acids Res. 2020 06 19; 48(11):5907-5925. PMID: 32383760; PMCID: PMC7293029.
    Citations: 6     Fields:    Translation:HumansAnimalsCells
  5. Berroyer A, Kim N. The Functional Consequences of Eukaryotic Topoisomerase 1 Interaction with G-Quadruplex DNA. Genes (Basel). 2020 02 12; 11(2). PMID: 32059547; PMCID: PMC7073998.
    Citations: 5     Fields:    Translation:HumansAnimalsCells
  6. Berroyer A, Alvarado G, Larson ED. Response of Sulfolobus solfataricus Dpo4 polymerase in vitro to a DNA G-quadruplex. Mutagenesis. 2019 09 20; 34(3):289-297. PMID: 31169295; PMCID: PMC6753385.
    Citations: 5     Fields:    Translation:HumansCells
  7. Williams JD, Fleetwood S, Berroyer A, Kim N, Larson ED. Sites of instability in the human TCF3 (E2A) gene adopt G-quadruplex DNA structures in vitro. Front Genet. 2015; 6:177. PMID: 26029241; PMCID: PMC4426816.
    Citations: 14     
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Funded by the NIH National Center for Advancing Translational Sciences through its Clinical and Translational Science Awards Program, grant number UL1TR002541.