Harvard Catalyst Profiles

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Hannah Wayment-Steele, Ph.D.

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Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
  1. Wayment-Steele HK, Kladwang W, Strom AI, Lee J, Treuille A, Becka A, Das R. RNA secondary structure packages evaluated and improved by high-throughput experiments. Nat Methods. 2022 10; 19(10):1234-1242. PMID: 36192461.
    Citations:    Fields:    Translation:HumansCells
  2. Andreasson JOL, Gotrik MR, Wu MJ, Wayment-Steele HK, Kladwang W, Portela F, Wellington-Oguri R, Das R, Greenleaf WJ. Crowdsourced RNA design discovers diverse, reversible, efficient, self-contained molecular switches. Proc Natl Acad Sci U S A. 2022 05 03; 119(18):e2112979119. PMID: 35471911; PMCID: PMC9170038.
    Citations: 1     Fields:    
  3. Leppek K, Byeon GW, Kladwang W, Wayment-Steele HK, Kerr CH, Xu AF, Kim DS, Topkar VV, Choe C, Rothschild D, Tiu GC, Wellington-Oguri R, Fujii K, Sharma E, Watkins AM, Nicol JJ, Romano J, Tunguz B, Diaz F, Cai H, Guo P, Wu J, Meng F, Shi S, Participants E, Dormitzer PR, Solórzano A, Barna M, Das R. Combinatorial optimization of mRNA structure, stability, and translation for RNA-based therapeutics. Nat Commun. 2022 03 22; 13(1):1536. PMID: 35318324; PMCID: PMC8940940.
    Citations: 3     Fields:    Translation:HumansCells
  4. Wayment-Steele HK, Kim DS, Choe CA, Nicol JJ, Wellington-Oguri R, Watkins AM, Parra Sperberg RA, Huang PS, Participants E, Das R. Correction to 'Theoretical basis for stabilizing messenger RNA through secondary structure design'. Nucleic Acids Res. 2021 Nov 08; 49(19):11405. PMID: 34591967.
    Citations: 1     Fields:    
  5. Wayment-Steele HK, Kladwang W, Watkins AM, Kim DS, Tunguz B, Reade W, Demkin M, Romano J, Wellington-Oguri R, Nicol JJ, Gao J, Onodera K, Fujikawa K, Mao H, Vandewiele G, Tinti M, Steenwinckel B, Ito T, Noumi T, He S, Ishi K, Lee Y, Öztürk F, Chiu A, Öztürk E, Amer K, Fares M, Participants E, Das R. Predictive models of RNA degradation through dual crowdsourcing. ArXiv. 2021 Oct 14. PMID: 34671698; PMCID: PMC8528079.
    Citations:    
  6. Wayment-Steele HK, Kim DS, Choe CA, Nicol JJ, Wellington-Oguri R, Watkins AM, Parra Sperberg RA, Huang PS, Participants E, Das R. Theoretical basis for stabilizing messenger RNA through secondary structure design. Nucleic Acids Res. 2021 10 11; 49(18):10604-10617. PMID: 34520542; PMCID: PMC8499941.
    Citations: 16     Fields:    Translation:HumansCells
  7. Leppek K, Byeon GW, Kladwang W, Wayment-Steele HK, Kerr CH, Xu AF, Kim DS, Topkar VV, Choe C, Rothschild D, Tiu GC, Wellington-Oguri R, Fujii K, Sharma E, Watkins AM, Nicol JJ, Romano J, Tunguz B, Participants E, Barna M, Das R. Combinatorial optimization of mRNA structure, stability, and translation for RNA-based therapeutics. bioRxiv. 2021 Mar 30. PMID: 33821271; PMCID: PMC8020971.
    Citations:    
  8. Wayment-Steele HK, Kim DS, Choe CA, Nicol JJ, Wellington-Oguri R, Watkins AM, Sperberg RAP, Huang PS, Participants E, Das R. Theoretical basis for stabilizing messenger RNA through secondary structure design. bioRxiv. 2021 Feb 19. PMID: 32869022; PMCID: PMC7457604.
    Citations:    
  9. Rangan R, Zheludev IN, Hagey RJ, Pham EA, Wayment-Steele HK, Glenn JS, Das R. RNA genome conservation and secondary structure in SARS-CoV-2 and SARS-related viruses: a first look. RNA. 2020 08; 26(8):937-959. PMID: 32398273; PMCID: PMC7373990.
    Citations: 97     Fields:    Translation:Cells
  10. Kostrz D, Wayment-Steele HK, Wang JL, Follenfant M, Pande VS, Strick TR, Gosse C. A modular DNA scaffold to study protein-protein interactions at single-molecule resolution. Nat Nanotechnol. 2019 10; 14(10):988-993. PMID: 31548690.
    Citations: 10     Fields:    Translation:HumansAnimalsCells
  11. Wayment-Steele H, Wu M, Gotrik M, Das R. Evaluating riboswitch optimality. Methods Enzymol. 2019; 623:417-450. PMID: 31239056.
    Citations: 2     Fields:    Translation:Cells
  12. Wayment-Steele HK, Pande VS. Note: Variational encoding of protein dynamics benefits from maximizing latent autocorrelation. J Chem Phys. 2018 Dec 07; 149(21):216101. PMID: 30525733.
    Citations: 2     Fields:    Translation:Cells
  13. Hernández CX, Wayment-Steele HK, Sultan MM, Husic BE, Pande VS. Variational encoding of complex dynamics. Phys Rev E. 2018 Jun; 97(6-1):062412. PMID: 30011547.
    Citations: 20     Fields:    
  14. Sultan MM, Wayment-Steele HK, Pande VS. Transferable Neural Networks for Enhanced Sampling of Protein Dynamics. J Chem Theory Comput. 2018 Apr 10; 14(4):1887-1894. PMID: 29529369.
    Citations: 14     Fields:    Translation:Cells
  15. Husic BE, McKiernan KA, Wayment-Steele HK, Sultan MM, Pande VS. A Minimum Variance Clustering Approach Produces Robust and Interpretable Coarse-Grained Models. J Chem Theory Comput. 2018 Feb 13; 14(2):1071-1082. PMID: 29253336.
    Citations: 5     Fields:    Translation:Cells
  16. Wayment-Steele HK, Frenkel D, Reinhardt A. Investigating the role of boundary bricks in DNA brick self-assembly. Soft Matter. 2017 Feb 22; 13(8):1670-1680. PMID: 28165104.
    Citations: 2     Fields:    Translation:Cells
  17. Agnarsson B, Wayment-Steele HK, Höök F, Kunze A. Monitoring of single and double lipid membrane formation with high spatiotemporal resolution using evanescent light scattering microscopy. Nanoscale. 2016 Nov 24; 8(46):19219-19223. PMID: 27845799.
    Citations: 2     Fields:    
  18. Wayment-Steele HK, Jing Y, Swann MJ, Johnson LE, Agnarsson B, Svedhem S, Johal MS, Kunze A. Effects of Al(3+) on Phosphocholine and Phosphoglycerol Containing Solid Supported Lipid Bilayers. Langmuir. 2016 Feb 23; 32(7):1771-81. PMID: 26783873.
    Citations:    Fields:    Translation:Cells
  19. Wayment-Steele HK, Johnson LE, Tian F, Dixon MC, Benz L, Johal MS. Monitoring N3 dye adsorption and desorption on TiO2 surfaces: a combined QCM-D and XPS study. ACS Appl Mater Interfaces. 2014 Jun 25; 6(12):9093-9. PMID: 24848580.
    Citations: 1     Fields:    
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Funded by the NIH National Center for Advancing Translational Sciences through its Clinical and Translational Science Awards Program, grant number UL1TR002541.