Harvard Catalyst Profiles

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Raza Ur Rahman, Ph.D.


Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
  1. Rahman RU, Liebhoff AM, Bansal V, Fiosins M, Rajput A, Sattar A, Magruder DS, Madan S, Sun T, Gautam A, Heins S, Liwinski T, Bethune J, Trenkwalder C, Fluck J, Mollenhauer B, Bonn S. SEAweb: the small RNA Expression Atlas web application. Nucleic Acids Res. 2020 01 08; 48(D1):D204-D219. PMID: 31598718.
    Citations:    Fields:    Translation:HumansAnimals
  2. Kaczmarczyk L, Bansal V, Rajput A, Rahman RU, Krzyzak W, Degen J, Poll S, Fuhrmann M, Bonn S, Jackson WS. Tagger-A Swiss army knife for multiomics to dissect cell type-specific mechanisms of gene expression in mice. PLoS Biol. 2019 08; 17(8):e3000374. PMID: 31393866.
    Citations: 1     Fields:    Translation:AnimalsCells
  3. Wanner N, Vornweg J, Combes A, Wilson S, Plappert J, Rafflenbeul G, Puelles VG, Rahman RU, Liwinski T, Lindner S, Grahammer F, Kretz O, Wlodek ME, Romano T, Moritz KM, Boerries M, Busch H, Bonn S, Little MH, Bechtel-Walz W, Huber TB. DNA Methyltransferase 1 Controls Nephron Progenitor Cell Renewal and Differentiation. J Am Soc Nephrol. 2019 01; 30(1):63-78. PMID: 30518531.
    Citations: 11     Fields:    Translation:AnimalsCells
  4. Mandad S, Rahman RU, Centeno TP, Vidal RO, Wildhagen H, Rammner B, Keihani S, Opazo F, Urban I, Ischebeck T, Kirli K, Benito E, Fischer A, Yousefi RY, Dennerlein S, Rehling P, Feussner I, Urlaub H, Bonn S, Rizzoli SO, Fornasiero EF. The codon sequences predict protein lifetimes and other parameters of the protein life cycle in the mouse brain. Sci Rep. 2018 11 15; 8(1):16913. PMID: 30443017.
    Citations: 5     Fields:    Translation:AnimalsCells
  5. Fornasiero EF, Mandad S, Wildhagen H, Alevra M, Rammner B, Keihani S, Opazo F, Urban I, Ischebeck T, Sakib MS, Fard MK, Kirli K, Centeno TP, Vidal RO, Rahman RU, Benito E, Fischer A, Dennerlein S, Rehling P, Feussner I, Bonn S, Simons M, Urlaub H, Rizzoli SO. Precisely measured protein lifetimes in the mouse brain reveal differences across tissues and subcellular fractions. Nat Commun. 2018 10 12; 9(1):4230. PMID: 30315172.
    Citations: 26     Fields:    Translation:Animals
  6. Rahman RU, Gautam A, Bethune J, Sattar A, Fiosins M, Magruder DS, Capece V, Shomroni O, Bonn S. Oasis 2: improved online analysis of small RNA-seq data. BMC Bioinformatics. 2018 02 14; 19(1):54. PMID: 29444641.
    Citations: 9     Fields:    Translation:Cells
  7. Hatje K, Rahman RU, Vidal RO, Simm D, Hammesfahr B, Bansal V, Rajput A, Mickael ME, Sun T, Bonn S, Kollmar M. The landscape of human mutually exclusive splicing. Mol Syst Biol. 2017 12 14; 13(12):959. PMID: 29242366.
    Citations: 12     Fields:    Translation:HumansAnimalsCells
  8. Zeb F, Naqvi S, Rahman R, Farooq AD. Depressive symptoms, monoamines levels, MAO-B activity and effect of treatment in a subset of depressed individuals from government sector hospital at Karachi. Pak J Pharm Sci. 2017 Jul; 30(4(Suppl.)):1509-1519. PMID: 29044007.
    Citations: 1     Fields:    Translation:Humans
  9. Husain N, Chaudhry N, Furber C, Fayyaz H, Kiran T, Lunat F, Rahman RU, Farhan S, Fatima B. Group psychological intervention for maternal depression: A nested qualitative study from Karachi, Pakistan. World J Psychiatry. 2017 Jun 22; 7(2):98-105. PMID: 28713687.
    Citations: 1     
  10. Centeno TP, Shomroni O, Hennion M, Halder R, Vidal R, Rahman RU, Bonn S. Genome-wide chromatin and gene expression profiling during memory formation and maintenance in adult mice. Sci Data. 2016 10 11; 3:160090. PMID: 27727234.
    Citations: 2     Fields:    Translation:AnimalsCells
  11. Halder R, Hennion M, Vidal RO, Shomroni O, Rahman RU, Rajput A, Centeno TP, van Bebber F, Capece V, Garcia Vizcaino JC, Schuetz AL, Burkhardt S, Benito E, Navarro Sala M, Javan SB, Haass C, Schmid B, Fischer A, Bonn S. DNA methylation changes in plasticity genes accompany the formation and maintenance of memory. Nat Neurosci. 2016 Jan; 19(1):102-10. PMID: 26656643.
    Citations: 101     Fields:    Translation:AnimalsCells
  12. Alonso-Barba JI, Rahman RU, Wittbrodt J, Mateo JL. MEPD: medaka expression pattern database, genes and more. Nucleic Acids Res. 2016 Jan 04; 44(D1):D819-21. PMID: 26450962.
    Citations: 2     Fields:    Translation:Animals
  13. Capece V, Garcia Vizcaino JC, Vidal R, Rahman RU, Pena Centeno T, Shomroni O, Suberviola I, Fischer A, Bonn S. Oasis: online analysis of small RNA deep sequencing data. Bioinformatics. 2015 Jul 01; 31(13):2205-7. PMID: 25701573.
    Citations: 28     Fields:    Translation:Humans
  14. Husain N, Afsar S, Ara J, Fayyaz H, Rahman RU, Tomenson B, Hamirani M, Chaudhry N, Fatima B, Husain M, Naeem F, Chaudhry IB. Brief psychological intervention after self-harm: randomised controlled trial from Pakistan. Br J Psychiatry. 2014 Jun; 204(6):462-70. PMID: 24676964.
    Citations: 13     Fields:    Translation:Humans
  15. Chaudhry IB, Husain N, Husain MO, Hallak J, Drake R, Kazmi A, Rahman Ru, Hamirani MM, Kiran T, Mehmood N, Stirling J, Dunn G, Deakin B. Ondansetron and simvastatin added to treatment as usual in patients with schizophrenia: study protocol for a randomized controlled trial. Trials. 2013 Apr 17; 14:101. PMID: 23782463.
    Citations: 3     Fields:    Translation:Humans
  16. Siddiqi MN, Yousafzai AW, Rahman RU. Pakistan: basic education essential to underpin reforms. Nature. 2009 Oct 15; 461(7266):874. PMID: 19829349.
    Citations:    Fields:    
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Funded by the NIH National Center for Advancing Translational Sciences through its Clinical and Translational Science Awards Program, grant number UL1TR002541.