Harvard Catalyst Profiles

Contact, publication, and social network information about Harvard faculty and fellows.

Shanlin Ke, Ph.D.


Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
Newest   |   Oldest   |   Most Cited   |   Most Discussed   |   Timeline   |   Field Summary   |   Plain Text
PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
  1. Ke S, Weiss ST, Liu YY. Dissecting the role of the human microbiome in COVID-19 via metagenome-assembled genomes. Nat Commun. 2022 09 06; 13(1):5235. PMID: 36068270; PMCID: PMC9446638.
    Citations:    Fields:    Translation:HumansCells
  2. Ke S, Weiss ST, Liu YY. Rejuvenating the human gut microbiome. Trends Mol Med. 2022 08; 28(8):619-630. PMID: 35781423; PMCID: PMC9339459.
    Citations:    Fields:    
  3. Ke S, Mitchell SJ, MacArthur MR, Kane AE, Sinclair DA, Venable EM, Chadaideh KS, Carmody RN, Grodstein F, Mitchell JR, Liu Y. Gut Microbiota Predicts Healthy Late-Life Aging in Male Mice. Nutrients. 2021 Sep 21; 13(9). PMID: 34579167; PMCID: PMC8467910.
    Citations: 2     Fields:    Translation:HumansAnimals
  4. Zhang J, Liu M, Ke S, Huang X, Fang S, He M, Fu H, Chen C, Huang L. Gut and Vagina Microbiota Associated With Estrus Return of Weaning Sows and Its Correlation With the Changes in Serum Metabolites. Front Microbiol. 2021; 12:690091. PMID: 34489885.
    Citations: 1     
  5. Cao Y, Wang L, Ke S, Villafuerte Gálvez JA, Pollock NR, Barrett C, Sprague R, Daugherty K, Xu H, Lin Q, Yao J, Chen Y, Kelly CP, Liu YY, Chen X. Fecal Mycobiota Combined With Host Immune Factors Distinguish Clostridioides difficile Infection From Asymptomatic Carriage. Gastroenterology. 2021 06; 160(7):2328-2339.e6. PMID: 33684427; PMCID: PMC8169571.
    Citations: 7     Fields:    Translation:HumansCells
  6. Ke S, Pollock NR, Wang XW, Chen X, Daugherty K, Lin Q, Xu H, Garey KW, Gonzales-Luna AJ, Kelly CP, Liu YY. Integrating gut microbiome and host immune markers to understand the pathogenesis of Clostridioides difficile infection. Gut Microbes. 2021 Jan-Dec; 13(1):1-18. PMID: 34132169.
    Citations: 7     Fields:    Translation:HumansCells
  7. Huang X, Gao J, Zhao Y, He M, Ke S, Wu J, Zhou Y, Fu H, Yang H, Chen C, Huang L. Dramatic Remodeling of the Gut Microbiome Around Parturition and Its Relationship With Host Serum Metabolic Changes in Sows. Front Microbiol. 2019; 10:2123. PMID: 31572329; PMCID: PMC6751307.
    Citations: 7     
  8. He M, Gao J, Wu J, Zhou Y, Fu H, Ke S, Yang H, Chen C, Huang L. Host Gender and Androgen Levels Regulate Gut Bacterial Taxa in Pigs Leading to Sex-Biased Serum Metabolite Profiles. Front Microbiol. 2019; 10:1359. PMID: 31275280; PMCID: PMC6591444.
    Citations: 12     
  9. Ke S, Fang S, He M, Huang X, Yang H, Yang B, Chen C, Huang L. Age-based dynamic changes of phylogenetic composition and interaction networks of health pig gut microbiome feeding in a uniformed condition. BMC Vet Res. 2019 May 24; 15(1):172. PMID: 31126262; PMCID: PMC6534858.
    Citations: 27     Fields:    Translation:AnimalsCells
  10. Yang H, Yang M, Fang S, Huang X, He M, Ke S, Gao J, Wu J, Zhou Y, Fu H, Chen C, Huang L. Evaluating the profound effect of gut microbiome on host appetite in pigs. BMC Microbiol. 2018 12 14; 18(1):215. PMID: 30547751; PMCID: PMC6295093.
    Citations: 22     Fields:    Translation:AnimalsCells
  11. Huang X, Fang S, Yang H, Gao J, He M, Ke S, Zhao Y, Chen C, Huang L. Evaluating the contribution of gut microbiome to the variance of porcine serum glucose and lipid concentration. Sci Rep. 2017 11 02; 7(1):14928. PMID: 29097803.
    Citations: 7     Fields:    Translation:AnimalsCells
  12. Hu G, Song Y, Ke S, Cao H, Zhang C, Deng G, Yang F, Zhou S, Liu P, Guo X, Liu P. Tanshinone IIA protects against pulmonary arterial hypertension in broilers. Poult Sci. 2017 May 01; 96(5):1132-1138. PMID: 27702914.
    Citations: 3     Fields:    Translation:Animals
  13. He M, Fang S, Huang X, Zhao Y, Ke S, Yang H, Li Z, Gao J, Chen C, Huang L. Evaluating the Contribution of Gut Microbiota to the Variation of Porcine Fatness with the Cecum and Fecal Samples. Front Microbiol. 2016; 7:2108. PMID: 28066405; PMCID: PMC5179512.
    Citations: 32     
Local representatives can answer questions about the Profiles website or help with editing a profile or issues with profile data. For assistance with this profile: HMS/HSDM faculty should contact contactcatalyst.harvard.edu. For faculty or fellow appointment updates and changes, please ask your appointing department to contact HMS. For fellow personal and demographic information, contact HMS Human Resources at human_resourceshms.harvard.edu. For faculty personal and demographic information, contact HMS Office for Faculty Affairs at facappthms.harvard.edu.
Ke's Networks
Click the
buttons for more information and interactive visualizations!
Concepts (47)
Co-Authors (8)
Similar People (60)
Same Department 
Funded by the NIH National Center for Advancing Translational Sciences through its Clinical and Translational Science Awards Program, grant number UL1TR002541.