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Monica Yun Liu, Ph.D., M.D.

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Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
  1. Caldwell BA, Liu MY, Prasasya RD, Wang T, DeNizio JE, Leu NA, Amoh NYA, Krapp C, Lan Y, Shields EJ, Bonasio R, Lengner CJ, Kohli RM, Bartolomei MS. Functionally distinct roles for TET-oxidized 5-methylcytosine bases in somatic reprogramming to pluripotency. Mol Cell. 2021 02 18; 81(4):859-869.e8. PMID: 33352108.
    Citations:    Fields:    Translation:HumansAnimalsCells
  2. Shen H, Ontiveros RJ, Owens MC, Liu MY, Ghanty U, Kohli RM, Liu KF. TET-mediated 5-methylcytosine oxidation in tRNA promotes translation. J Biol Chem. 2020 Nov 23; 296:100087. PMID: 33460917.
    Citations:    Fields:    
  3. Shen H, Ontiveros RJ, Owens MC, Liu MY, Ghanty U, Kohli RM, Liu KF. TET-mediated 5-methylcytosine oxidation in tRNA promotes translation. J Biol Chem. 2020 Nov 16. PMID: 33199375.
    Citations:    Fields:    
  4. Ghanty U, DeNizio JE, Liu MY, Kohli RM. Exploiting Substrate Promiscuity To Develop Activity-Based Probes for Ten-Eleven Translocation Family Enzymes. J Am Chem Soc. 2018 12 19; 140(50):17329-17332. PMID: 30518204.
    Citations: 4     Fields:    Translation:HumansCells
  5. DeNizio JE, Liu MY, Leddin EM, Cisneros GA, Kohli RM. Selectivity and Promiscuity in TET-Mediated Oxidation of 5-Methylcytosine in DNA and RNA. Biochemistry. 2019 02 05; 58(5):411-421. PMID: 30387995.
    Citations: 10     Fields:    Translation:HumansCells
  6. Hrit J, Goodrich L, Li C, Wang BA, Nie J, Cui X, Martin EA, Simental E, Fernandez J, Liu MY, Nery JR, Castanon R, Kohli RM, Tretyakova N, He C, Ecker JR, Goll M, Panning B. OGT binds a conserved C-terminal domain of TET1 to regulate TET1 activity and function in development. Elife. 2018 10 16; 7. PMID: 30325306.
    Citations: 10     Fields:    Translation:HumansAnimalsCells
  7. Schutsky EK, DeNizio JE, Hu P, Liu MY, Nabel CS, Fabyanic EB, Hwang Y, Bushman FD, Wu H, Kohli RM. Nondestructive, base-resolution sequencing of 5-hydroxymethylcytosine using a DNA deaminase. Nat Biotechnol. 2018 Oct 08. PMID: 30295673.
    Citations: 24     Fields:    
  8. DeNizio JE, Schutsky EK, Berrios KN, Liu MY, Kohli RM. Harnessing natural DNA modifying activities for editing of the genome and epigenome. Curr Opin Chem Biol. 2018 08; 45:10-17. PMID: 29452938.
    Citations: 2     Fields:    Translation:HumansAnimalsCells
  9. Kubiak JM, Culyba MJ, Liu MY, Mo CY, Goulian M, Kohli RM. A Small-Molecule Inducible Synthetic Circuit for Control of the SOS Gene Network without DNA Damage. ACS Synth Biol. 2017 11 17; 6(11):2067-2076. PMID: 28826208.
    Citations: 2     Fields:    Translation:Cells
  10. Liu MY, Torabifard H, Crawford DJ, DeNizio JE, Cao XJ, Garcia BA, Cisneros GA, Kohli RM. Mutations along a TET2 active site scaffold stall oxidation at 5-hydroxymethylcytosine. Nat Chem Biol. 2017 02; 13(2):181-187. PMID: 27918559.
    Citations: 20     Fields:    Translation:HumansCells
  11. Liu MY, DeNizio JE, Schutsky EK, Kohli RM. The expanding scope and impact of epigenetic cytosine modifications. Curr Opin Chem Biol. 2016 08; 33:67-73. PMID: 27315338.
    Citations: 7     Fields:    Translation:HumansAnimals
  12. Liu MY, DeNizio JE, Kohli RM. Quantification of Oxidized 5-Methylcytosine Bases and TET Enzyme Activity. Methods Enzymol. 2016; 573:365-85. PMID: 27372762.
    Citations: 11     Fields:    Translation:HumansAnimalsCells
  13. Crawford DJ, Liu MY, Nabel CS, Cao XJ, Garcia BA, Kohli RM. Tet2 Catalyzes Stepwise 5-Methylcytosine Oxidation by an Iterative and de novo Mechanism. J Am Chem Soc. 2016 Jan 27; 138(3):730-3. PMID: 26734843.
    Citations: 19     Fields:    Translation:Cells
  14. Liu MY, Liu J, Mehrotra D, Liu Y, Guo Y, Baldera-Aguayo PA, Mooney VL, Nour AM, Yan EC. Thermal stability of rhodopsin and progression of retinitis pigmentosa: comparison of S186W and D190N rhodopsin mutants. J Biol Chem. 2013 Jun 14; 288(24):17698-712. PMID: 23625926.
    Citations: 10     Fields:    Translation:HumansCells
  15. Liu J, Liu MY, Fu L, Zhu GA, Yan ECY. Chemical kinetic analysis of thermal decay of rhodopsin reveals unusual energetics of thermal isomerization and hydrolysis of Schiff base. J Biol Chem. 2011 Nov 04; 286(44):38408-38416. PMID: 21921035.
    Citations: 6     Fields:    Translation:HumansAnimalsCells
  16. Liu J, Liu MY, Nguyen JB, Bhagat A, Mooney V, Yan EC. Thermal properties of rhodopsin: insight into the molecular mechanism of dim-light vision. J Biol Chem. 2011 Aug 05; 286(31):27622-9. PMID: 21659526.
    Citations: 13     Fields:    Translation:HumansCells
  17. Liu J, Liu MY, Nguyen JB, Bhagat A, Mooney V, Yan EC. Thermal decay of rhodopsin: role of hydrogen bonds in thermal isomerization of 11-cis retinal in the binding site and hydrolysis of protonated Schiff base. J Am Chem Soc. 2009 Jul 01; 131(25):8750-1. PMID: 19505100.
    Citations: 10     Fields:    Translation:AnimalsCells
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Funded by the NIH National Center for Advancing Translational Sciences through its Clinical and Translational Science Awards Program, grant number UL1TR002541.