Harvard Catalyst Profiles

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James Thomas Coates, Ph.D.

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Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
  1. Coates JT, de Koning C. Machine learning-driven critical care decision making. J R Soc Med. 2022 06; 115(6):236-238. PMID: 35387520; PMCID: PMC9136382.
    Citations: 1     Fields:    Translation:Humans
  2. Coates JT, Sun S, Leshchiner I, Thimmiah N, Martin EE, McLoughlin D, Danysh BP, Slowik K, Jacobs RA, Rhrissorrakrai K, Utro F, Levovitz C, Denault E, Walmsley CS, Kambadakone A, Stone JR, Isakoff SJ, Parida L, Juric D, Getz G, Bardia A, Ellisen LW. Parallel Genomic Alterations of Antigen and Payload Targets Mediate Polyclonal Acquired Clinical Resistance to Sacituzumab Govitecan in Triple-Negative Breast Cancer. Cancer Discov. 2021 10; 11(10):2436-2445. PMID: 34404686; PMCID: PMC8495771.
    Citations: 4     Fields:    Translation:HumansCells
  3. Coates JTT, Rodriguez-Berriguete G, Puliyadi R, Ashton T, Prevo R, Wing A, Granata G, Pirovano G, McKenna GW, Higgins GS. The anti-malarial drug atovaquone potentiates platinum-mediated cancer cell death by increasing oxidative stress. Cell Death Discov. 2020; 6:110. PMID: 33133645.
    Citations: 2     
  4. Kang J, Coates JT, Strawderman RL, Rosenstein BS, Kerns SL. Genomics models in radiotherapy: From mechanistic to machine learning. Med Phys. 2020 Jun; 47(5):e203-e217. PMID: 32418335.
    Citations: 6     Fields:    Translation:Humans
  5. Ray KJ, Simard MA, Larkin JR, Coates J, Kinchesh P, Smart SC, Higgins GS, Chappell MA, Sibson NR. Tumor pH and Protein Concentration Contribute to the Signal of Amide Proton Transfer Magnetic Resonance Imaging. Cancer Res. 2019 04 01; 79(7):1343-1352. PMID: 30679178.
    Citations: 18     Fields:    Translation:HumansAnimals
  6. Coates JT, Skwarski M, Higgins GS. Targeting tumour hypoxia: shifting focus from oxygen supply to demand. Br J Radiol. 2019 Jan; 92(1093):20170843. PMID: 29436847; PMCID: PMC6435066.
    Citations: 7     Fields:    Translation:Humans
  7. El Naqa I, Kerns SL, Coates J, Luo Y, Speers C, West CML, Rosenstein BS, Ten Haken RK. Radiogenomics and radiotherapy response modeling. Phys Med Biol. 2017 Aug 01; 62(16):R179-R206. PMID: 28657906.
    Citations: 21     Fields:    Translation:Humans
  8. Coates J, Souhami L, El Naqa I. Big Data Analytics for Prostate Radiotherapy. Front Oncol. 2016; 6:149. PMID: 27379211; PMCID: PMC4905980.
    Citations: 15     
  9. Coates J, El Naqa I. Outcome modeling techniques for prostate cancer radiotherapy: Data, models, and validation. Phys Med. 2016 Mar; 32(3):512-20. PMID: 27053448.
    Citations: 3     Fields:    Translation:Humans
  10. Coates J, Jeyaseelan AK, Ybarra N, David M, Faria S, Souhami L, Cury F, Duclos M, El Naqa I. Contrasting analytical and data-driven frameworks for radiogenomic modeling of normal tissue toxicities in prostate cancer. Radiother Oncol. 2015 Apr; 115(1):107-13. PMID: 25818395.
    Citations: 11     Fields:    Translation:HumansPHPublic Health
  11. Coates J. Motivation for the inclusion of genetic risk factors of radiosensitivity alongside dosimetric and clinical parameters in predicting normal tissue effects. Acta Oncol. 2015; 54(8):1230-1. PMID: 25608825.
    Citations: 3     Fields:    Translation:Humans
  12. Coates J, Ybarra N, El Naqa I. Non-invasive whole-body plethysmograph for assessment and prediction of radiation-induced lung injury using simultaneously acquired nitric oxide and lung volume measurements. Physiol Meas. 2014 Sep; 35(9):1737-50. PMID: 25119582.
    Citations:    Fields:    Translation:AnimalsPHPublic Health
  13. Fernandes BF, Coates J, Odashiro AN, Quezada C, Huynh A, Odashiro PR, Odashiro M, Burnier MN. Hypoxia-inducible factor-1a and its role in the proliferation of retinoblastoma cells. Pathol Oncol Res. 2014 Jul; 20(3):557-63. PMID: 24338218.
    Citations: 2     Fields:    Translation:HumansCells
  14. Fernandes BF, Nikolitch K, Coates J, Novais G, Odashiro A, Odashiro PP, Belfort RN, Burnier MN. Local chemotherapeutic agents for the treatment of ocular malignancies. Surv Ophthalmol. 2014 Jan-Feb; 59(1):97-114. PMID: 24112549.
    Citations: 5     Fields:    Translation:HumansAnimals
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Funded by the NIH National Center for Advancing Translational Sciences through its Clinical and Translational Science Awards Program, grant number UL1TR002541.