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Pavel Flegontov, Ph.D.

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Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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  1. Flegontova O, Flegontov P, Londoño PAC, Walczowski W, Šantic D, Edgcomb VP, Lukeš J, Horák A. Environmental determinants of the distribution of planktonic diplonemids and kinetoplastids in the oceans. Environ Microbiol. 2020 Aug 10. PMID: 32779301.
    Citations:    
  2. Polanska N, Ishemgulova A, Volfova V, Flegontov P, Votypka J, Yurchenko V, Volf P. Sergentomyia schwetzi: Salivary gland transcriptome, proteome and enzymatic activities in two lineages adapted to different blood sources. PLoS One. 2020; 15(3):e0230537. PMID: 32208452.
    Citations:    
  3. Butenko A, Opperdoes FR, Flegontova O, Horák A, Hampl V, Keeling P, Gawryluk RMR, Tikhonenkov D, Flegontov P, Lukeš J. Evolution of metabolic capabilities and molecular features of diplonemids, kinetoplastids, and euglenids. BMC Biol. 2020 03 02; 18(1):23. PMID: 32122335.
    Citations:    
  4. Flegontov P, Altinisik NE, Changmai P, Rohland N, Mallick S, Adamski N, Bolnick DA, Broomandkhoshbacht N, Candilio F, Culleton BJ, Flegontova O, Friesen TM, Jeong C, Harper TK, Keating D, Kennett DJ, Kim AM, Lamnidis TC, Lawson AM, Olalde I, Oppenheimer J, Potter BA, Raff J, Sattler RA, Skoglund P, Stewardson K, Vajda EJ, Vasilyev S, Veselovskaya E, Hayes MG, O'Rourke DH, Krause J, Pinhasi R, Reich D, Schiffels S. Palaeo-Eskimo genetic ancestry and the peopling of Chukotka and North America. Nature. 2019 06; 570(7760):236-240. PMID: 31168094.
    Citations:    
  5. Jeong C, Balanovsky O, Lukianova E, Kahbatkyzy N, Flegontov P, Zaporozhchenko V, Immel A, Wang CC, Ixan O, Khussainova E, Bekmanov B, Zaibert V, Lavryashina M, Pocheshkhova E, Yusupov Y, Agdzhoyan A, Koshel S, Bukin A, Nymadawa P, Turdikulova S, Dalimova D, Churnosov M, Skhalyakho R, Daragan D, Bogunov Y, Bogunova A, Shtrunov A, Dubova N, Zhabagin M, Yepiskoposyan L, Churakov V, Pislegin N, Damba L, Saroyants L, Dibirova K, Atramentova L, Utevska O, Idrisov E, Kamenshchikova E, Evseeva I, Metspalu M, Outram AK, Robbeets M, Djansugurova L, Balanovska E, Schiffels S, Haak W, Reich D, Krause J. The genetic history of admixture across inner Eurasia. Nat Ecol Evol. 2019 06; 3(6):966-976. PMID: 31036896.
    Citations:    
  6. Lipson M, Cheronet O, Mallick S, Rohland N, Oxenham M, Pietrusewsky M, Pryce TO, Willis A, Matsumura H, Buckley H, Domett K, Nguyen GH, Trinh HH, Kyaw AA, Win TT, Pradier B, Broomandkhoshbacht N, Candilio F, Changmai P, Fernandes D, Ferry M, Gamarra B, Harney E, Kampuansai J, Kutanan W, Michel M, Novak M, Oppenheimer J, Sirak K, Stewardson K, Zhang Z, Flegontov P, Pinhasi R, Reich D. Ancient genomes document multiple waves of migration in Southeast Asian prehistory. Science. 2018 07 06; 361(6397):92-95. PMID: 29773666.
    Citations:    Fields:    Translation:Humans
  7. Záhonová K, Petrželková R, Valach M, Yazaki E, Tikhonenkov DV, Butenko A, Janouškovec J, Hrdá Š, Klimeš V, Burger G, Inagaki Y, Keeling PJ, Hampl V, Flegontov P, Yurchenko V, Eliáš M. Extensive molecular tinkering in the evolution of the membrane attachment mode of the Rheb GTPase. Sci Rep. 2018 03 27; 8(1):5239. PMID: 29588502.
    Citations:    
  8. Flegontova O, Flegontov P, Malviya S, Poulain J, de Vargas C, Bowler C, Lukeš J, Horák A. Neobodonids are dominant kinetoplastids in the global ocean. Environ Microbiol. 2018 02; 20(2):878-889. PMID: 29266706.
    Citations:    
  9. Gerasimov ES, Gasparyan AA, Kaurov I, Tichý B, Logacheva MD, Kolesnikov AA, Lukeš J, Yurchenko V, Zimmer SL, Flegontov P. Trypanosomatid mitochondrial RNA editing: dramatically complex transcript repertoires revealed with a dedicated mapping tool. Nucleic Acids Res. 2018 01 25; 46(2):765-781. PMID: 29220521.
    Citations:    
  10. Kutanan W, Kampuansai J, Changmai P, Flegontov P, Schröder R, Macholdt E, Hübner A, Kangwanpong D, Stoneking M. Contrasting maternal and paternal genetic variation of hunter-gatherer groups in Thailand. Sci Rep. 2018 01 24; 8(1):1536. PMID: 29367746.
    Citations:    
  11. Kilinç GM, Koptekin D, Atakuman Ç, Sümer AP, Dönertas HM, Yaka R, Bilgin CC, Büyükkarakaya AM, Baird D, Altinisik E, Flegontov P, Götherström A, Togan I, Somel M. Archaeogenomic analysis of the first steps of Neolithization in Anatolia and the Aegean. Proc Biol Sci. 2017 Nov 29; 284(1867). PMID: 29167366.
    Citations:    
  12. Skalický T, Dobáková E, Wheeler RJ, Tesarová M, Flegontov P, Jirsová D, Votýpka J, Yurchenko V, Ayala FJ, Lukeš J. Extensive flagellar remodeling during the complex life cycle of Paratrypanosoma, an early-branching trypanosomatid. Proc Natl Acad Sci U S A. 2017 10 31; 114(44):11757-11762. PMID: 29078369.
    Citations:    
  13. Kostygov AY, Butenko A, Nenarokova A, Tashyreva D, Flegontov P, Lukeš J, Yurchenko V. Genome of Ca. Pandoraea novymonadis, an Endosymbiotic Bacterium of the Trypanosomatid Novymonas esmeraldas. Front Microbiol. 2017; 8:1940. PMID: 29046673.
    Citations:    
  14. Tanifuji G, Cenci U, Moog D, Dean S, Nakayama T, David V, Fiala I, Curtis BA, Sibbald SJ, Onodera NT, Colp M, Flegontov P, Johnson-MacKinnon J, McPhee M, Inagaki Y, Hashimoto T, Kelly S, Gull K, Lukeš J, Archibald JM. Genome sequencing reveals metabolic and cellular interdependence in an amoeba-kinetoplastid symbiosis. Sci Rep. 2017 09 15; 7(1):11688. PMID: 28916813.
    Citations:    
  15. Huang YZ, Pamjav H, Flegontov P, Stenzl V, Wen SQ, Tong XZ, Wang CC, Wang LX, Wei LH, Gao JY, Jin L, Li H. Dispersals of the Siberian Y-chromosome haplogroup Q in Eurasia. Mol Genet Genomics. 2018 Feb; 293(1):107-117. PMID: 28884289.
    Citations:    
  16. Ishemgulova A, Butenko A, Kortišová L, Boucinha C, Grybchuk-Ieremenko A, Morelli KA, Tesarová M, Kraeva N, Grybchuk D, Pánek T, Flegontov P, Lukeš J, Votýpka J, Pavan MG, Opperdoes FR, Spodareva V, d'Avila-Levy CM, Kostygov AY, Yurchenko V. Molecular mechanisms of thermal resistance of the insect trypanosomatid Crithidia thermophila. PLoS One. 2017; 12(3):e0174165. PMID: 28328988.
    Citations:    
  17. Flegontova O, Flegontov P, Malviya S, Audic S, Wincker P, de Vargas C, Bowler C, Lukeš J, Horák A. Extreme Diversity of Diplonemid Eukaryotes in the Ocean. Curr Biol. 2016 11 21; 26(22):3060-3065. PMID: 27875689.
    Citations:    
  18. Flegontov P, Kassian A, Thomas MG, Fedchenko V, Changmai P, Starostin G. Pitfalls of the Geographic Population Structure (GPS) Approach Applied to Human Genetic History: A Case Study of Ashkenazi Jews. Genome Biol Evol. 2016 08 16; 8(7):2259-65. PMID: 27389685.
    Citations:    
  19. Morozova I, Flegontov P, Mikheyev AS, Bruskin S, Asgharian H, Ponomarenko P, Klyuchnikov V, ArunKumar G, Prokhortchouk E, Gankin Y, Rogaev E, Nikolsky Y, Baranova A, Elhaik E, Tatarinova TV. Toward high-resolution population genomics using archaeological samples. DNA Res. 2016 Aug; 23(4):295-310. PMID: 27436340.
    Citations:    
  20. Opperdoes FR, Butenko A, Flegontov P, Yurchenko V, Lukeš J. Comparative Metabolism of Free-living Bodo saltans and Parasitic Trypanosomatids. J Eukaryot Microbiol. 2016 09; 63(5):657-78. PMID: 27009761.
    Citations:    
  21. Flegontov P, Butenko A, Firsov S, Kraeva N, Eliáš M, Field MC, Filatov D, Flegontova O, Gerasimov ES, Hlavácová J, Ishemgulova A, Jackson AP, Kelly S, Kostygov AY, Logacheva MD, Maslov DA, Opperdoes FR, O'Reilly A, Sádlová J, Ševcíková T, Venkatesh D, Vlcek C, Volf P, Votýpka J, Záhonová K, Yurchenko V, Lukeš J. Genome of Leptomonas pyrrhocoris: a high-quality reference for monoxenous trypanosomatids and new insights into evolution of Leishmania. Sci Rep. 2016 Mar 29; 6:23704. PMID: 27021793.
    Citations:    
  22. Flegontov P, Changmai P, Zidkova A, Logacheva MD, Altinisik NE, Flegontova O, Gelfand MS, Gerasimov ES, Khrameeva EE, Konovalova OP, Neretina T, Nikolsky YV, Starostin G, Stepanova VV, Travinsky IV, Tríska M, Tríska P, Tatarinova TV. Genomic study of the Ket: a Paleo-Eskimo-related ethnic group with significant ancient North Eurasian ancestry. Sci Rep. 2016 Feb 11; 6:20768. PMID: 26865217.
    Citations:    
  23. David V, Flegontov P, Gerasimov E, Tanifuji G, Hashimi H, Logacheva MD, Maruyama S, Onodera NT, Gray MW, Archibald JM, Lukeš J. Gene Loss and Error-Prone RNA Editing in the Mitochondrion of Perkinsela, an Endosymbiotic Kinetoplastid. mBio. 2015 Dec 01; 6(6):e01498-15. PMID: 26628723.
    Citations:    
  24. Dobáková E, Flegontov P, Skalický T, Lukeš J. Unexpectedly Streamlined Mitochondrial Genome of the Euglenozoan Euglena gracilis. Genome Biol Evol. 2015 Nov 20; 7(12):3358-67. PMID: 26590215.
    Citations:    
  25. Kraeva N, Butenko A, Hlavácová J, Kostygov A, Myškova J, Grybchuk D, Leštinová T, Votýpka J, Volf P, Opperdoes F, Flegontov P, Lukeš J, Yurchenko V. Leptomonas seymouri: Adaptations to the Dixenous Life Cycle Analyzed by Genome Sequencing, Transcriptome Profiling and Co-infection with Leishmania donovani. PLoS Pathog. 2015 Aug; 11(8):e1005127. PMID: 26317207.
    Citations:    
  26. Woo YH, Ansari H, Otto TD, Klinger CM, Kolisko M, Michálek J, Saxena A, Shanmugam D, Tayyrov A, Veluchamy A, Ali S, Bernal A, del Campo J, Cihlár J, Flegontov P, Gornik SG, Hajdušková E, Horák A, Janouškovec J, Katris NJ, Mast FD, Miranda-Saavedra D, Mourier T, Naeem R, Nair M, Panigrahi AK, Rawlings ND, Padron-Regalado E, Ramaprasad A, Samad N, Tomcala A, Wilkes J, Neafsey DE, Doerig C, Bowler C, Keeling PJ, Roos DS, Dacks JB, Templeton TJ, Waller RF, Lukeš J, Oborník M, Pain A. Chromerid genomes reveal the evolutionary path from photosynthetic algae to obligate intracellular parasites. Elife. 2015 Jul 15; 4:e06974. PMID: 26175406.
    Citations: 34     Fields:    Translation:Animals
  27. Kozlov K, Chebotarev D, Hassan M, Triska M, Triska P, Flegontov P, Tatarinova TV. Differential Evolution approach to detect recent admixture. BMC Genomics. 2015; 16 Suppl 8:S9. PMID: 26111206.
    Citations:    
  28. Flegontov P, Michálek J, Janouškovec J, Lai DH, Jirku M, Hajdušková E, Tomcala A, Otto TD, Keeling PJ, Pain A, Oborník M, Lukeš J. Divergent mitochondrial respiratory chains in phototrophic relatives of apicomplexan parasites. Mol Biol Evol. 2015 May; 32(5):1115-31. PMID: 25660376.
    Citations:    
  29. Porcel BM, Denoeud F, Opperdoes F, Noel B, Madoui MA, Hammarton TC, Field MC, Da Silva C, Couloux A, Poulain J, Katinka M, Jabbari K, Aury JM, Campbell DA, Cintron R, Dickens NJ, Docampo R, Sturm NR, Koumandou VL, Fabre S, Flegontov P, Lukeš J, Michaeli S, Mottram JC, Szöor B, Zilberstein D, Bringaud F, Wincker P, Dollet M. The streamlined genome of Phytomonas spp. relative to human pathogenic kinetoplastids reveals a parasite tailored for plants. PLoS Genet. 2014 Feb; 10(2):e1004007. PMID: 24516393.
    Citations:    
  30. Flegontov P, Votýpka J, Skalický T, Logacheva MD, Penin AA, Tanifuji G, Onodera NT, Kondrashov AS, Volf P, Archibald JM, Lukeš J. Paratrypanosoma is a novel early-branching trypanosomatid. Curr Biol. 2013 Sep 23; 23(18):1787-93. PMID: 24012313.
    Citations:    
  31. Janouskovec J, Sobotka R, Lai DH, Flegontov P, Koník P, Komenda J, Ali S, Prásil O, Pain A, Oborník M, Lukes J, Keeling PJ. Split photosystem protein, linear-mapping topology, and growth of structural complexity in the plastid genome of Chromera velia. Mol Biol Evol. 2013 Nov; 30(11):2447-62. PMID: 23974208.
    Citations:    
  32. Burki F, Flegontov P, Oborník M, Cihlár J, Pain A, Lukes J, Keeling PJ. Re-evaluating the green versus red signal in eukaryotes with secondary plastid of red algal origin. Genome Biol Evol. 2012; 4(6):626-35. PMID: 22593553.
    Citations:    
  33. Flegontova O, Lukeš J, Flegontov P. Lack of evidence for integration of Trypanosoma cruzi minicircle DNA in South American human genomes. Int J Parasitol. 2012 May 01; 42(5):437-41. PMID: 22549024.
    Citations:    
  34. Korený L, Sobotka R, Kovárová J, Gnipová A, Flegontov P, Horváth A, Oborník M, Ayala FJ, Lukeš J. Aerobic kinetoplastid flagellate Phytomonas does not require heme for viability. Proc Natl Acad Sci U S A. 2012 Mar 06; 109(10):3808-13. PMID: 22355128.
    Citations:    
  35. Zhirenkina EN, Ponirovskii EN, Strelkova MV, Morozov EN, Flegontov PN, Kolesnikov AA, Ponomareva VI, Nasyrova RM, Kovalenko DA, Fatullaeva AA, Razakov ShA, Shnur L, Banet G, Varburg A, Shonian G. [The epidemiological features of visceral leishmaniasis, revealed on examination of children by polymerase chain reaction, in the Papsky District, Namangan Region, Uzbekistan]. Med Parazitol (Mosk). 2011 Jul-Sep; (3):37-41. PMID: 21936088.
    Citations:    
  36. Flegontov P, Gray MW, Burger G, Lukeš J. Gene fragmentation: a key to mitochondrial genome evolution in Euglenozoa? Curr Genet. 2011 Aug; 57(4):225-32. PMID: 21544620.
    Citations:    
  37. Flegontov PN, Zhirenkina EN, Gerasimov ES, Ponirovsky EN, Strelkova MV, Kolesnikov AA. Selective amplification of maxicircle classes during the life cycle of Leishmania major. Mol Biochem Parasitol. 2009 Jun; 165(2):142-52. PMID: 19428661.
    Citations:    
  38. Flegontov PN, Kolesnikov AA. Radically different maxicircle classes within the same kinetoplast: an artefact or a novel feature of the kinetoplast genome? Kinetoplastid Biol Dis. 2006 Sep 18; 5:5. PMID: 16978422.
    Citations:    
  39. Flegontov PN, Guo Q, Ren L, Strelkova MV, Kolesnikov AA. Conserved repeats in the kinetoplast maxicircle divergent region of Leishmania sp. and Leptomonas seymouri. Mol Genet Genomics. 2006 Oct; 276(4):322-33. PMID: 16909285.
    Citations:    
  40. Flegontov PN, Strelkova MV, Kolesnikov AA. The Leishmania major maxicircle divergent region is variable in different isolates and cell types. Mol Biochem Parasitol. 2006 Apr; 146(2):173-9. PMID: 16442169.
    Citations:    
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Funded by the NIH National Center for Advancing Translational Sciences through its Clinical and Translational Science Awards Program, grant number UL1TR002541.