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Stephanie Siegmund, M.D.,Ph.D.

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Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
  1. Lo YC, Bauer AH, Odintsov I, Siegmund SE, Sholl LM, Dong F. Integrating Molecular Sequencing Into the Pathological Diagnosis of Clinically Suspected Non-Small Cell Lung Carcinomas. Mod Pathol. 2023 Feb 07; 36(5):100126. PMID: 36842187.
    Citations:    Fields:    
  2. Chai JL, Alencar RO, Hirsch MS, Bhagavatula S, Bay CP, Siegmund S, Chang SL, Silverman SG. Reliability and Management Outcomes Following a Percutaneous Biopsy Diagnosis of Oncocytoma: A 15-year Retrospective Analysis. Radiology. 2023 Jan 24; 221156. PMID: 36692400.
    Citations:    Fields:    
  3. Collins K, Sholl LM, Siegmund S, Dickson BC, Colecchia M, Michalová K, Hwang M, Ulbright TM, Kao CS, van Leenders GJLH, Mehta V, Trpkov K, Yilmaz A, Cimadamore A, Matoso A, Epstein JI, Maclean F, Comperat E, Anderson WJ, Fletcher CDM, Acosta AM. Myoid gonadal stromal tumours are characterised by recurrent chromosome-level copy number gains: molecular assessment of a multi-institutional series. Histopathology. 2023 Feb; 82(3):431-438. PMID: 36226695.
    Citations:    Fields:    Translation:HumansCells
  4. Siegmund SE, Sholl LM, Tsai HK, Yang Y, Vasudevaraja V, Tran I, Snuderl M, Fletcher CDM, Cornejo KM, Idrees MT, Al-Obaidy KI, Collins K, Gordetsky JB, Wobker SE, Hirsch MS, Trpkov K, Yilmaz A, Anderson WJ, Quiroga-Garza G, Magi-Galluzzi C, Canete-Portillo S, Acosta AM. Clinicopathologic and molecular spectrum of testicular sex cord-stromal tumors not amenable to specific histopathologic subclassification. Mod Pathol. 2022 12; 35(12):1944-1954. PMID: 36180576.
    Citations:    Fields:    Translation:Humans
  5. Siegmund SE, Mehra R, Acosta AM. An update on diagnostic tissue-based biomarkers in testicular tumors. Hum Pathol. 2022 Aug 03. PMID: 35932825.
    Citations:    Fields:    
  6. Berchuck JE, Boiarsky D, Silver R, Sunkara R, McClure HM, Tsai HK, Siegmund S, Tewari AK, Nowak JA, Lindeman NI, Rana HQ, Choudhury AD, Pomerantz MM, Freedman ML, Van Allen EM, Taplin ME. Addition of Germline Testing to Tumor-Only Sequencing Improves Detection of Pathogenic Germline Variants in Men With Advanced Prostate Cancer. JCO Precis Oncol. 2022 Aug; 6:e2200329. PMID: 36103646; PMCID: PMC9489164.
    Citations:    Fields:    Translation:HumansCellsCTClinical Trials
  7. Siegmund SE, Manning DK, Davineni PK, Dong F. Deriving tumor purity from cancer next generation sequencing data: applications for quantitative ERBB2 (HER2) copy number analysis and germline inference of BRCA1 and BRCA2 mutations. Mod Pathol. 2022 10; 35(10):1458-1467. PMID: 35902772.
    Citations:    Fields:    
  8. Siegmund, S., Landa, I., Wong, K. S., & Barletta, J. A. (2021). "Hürthle cell neoplasms." Diagnostic Histopathology 27(6), 231–239. https://doi.org/10.1016/j.mpdhp.2021.03.001. Diagnostic Histopathology. Hürthle cell neoplasms. 2022; 27(6):231-239. View Publication.
  9. Song KW, Budhu J, Isroff C, Siegmund S, Gonzalez Castro LN. Clinical Problem Solving: A 56-Year-Old Woman With Right Facial Weakness, Numbness, and Diplopia. Neurohospitalist. 2022 Jul; 12(3):512-515. PMID: 35755233; PMCID: PMC9214925.
    Citations:    
  10. Mutter GL, Milstone DS, Hwang DH, Siegmund S, Bruce A. Measuring Digital Pathology Throughput and Tissue Dropouts. J Pathol Inform. 2022; 13:8. PMID: 35136675; PMCID: PMC8794031.
    Citations:    
  11. Siegmund S, Sholl LM, Cornejo KM, Sangoi AR, Otis CN, Mehra R, Hirsch MS, Acosta AM. Molecular assessment of testicular adult granulosa cell tumor demonstrates significant differences when compared to ovarian counterparts. Mod Pathol. 2022 05; 35(5):697-704. PMID: 34845303.
    Citations:    Fields:    Translation:Humans
  12. Carter SD, Hampton CM, Langlois R, Melero R, Farino ZJ, Calderon MJ, Li W, Wallace CT, Tran NH, Grassucci RA, Siegmund SE, Pemberton J, Morgenstern TJ, Eisenman L, Aguilar JI, Greenberg NL, Levy ES, Yi E, Mitchell WG, Rice WJ, Wigge C, Pilli J, George EW, Aslanoglou D, Courel M, Freyberg RJ, Javitch JA, Wills ZP, Area-Gomez E, Shiva S, Bartolini F, Volchuk A, Murray SA, Aridor M, Fish KN, Walter P, Balla T, Fass D, Wolf SG, Watkins SC, Carazo JM, Jensen GJ, Frank J, Freyberg Z. Ribosome-associated vesicles: A dynamic subcompartment of the endoplasmic reticulum in secretory cells. Sci Adv. 2020 04; 6(14):eaay9572. PMID: 32270040; PMCID: PMC7112762.
    Citations: 16     Fields:    Translation:AnimalsCells
  13. Li R, Zeng X, Sigmund SE, Lin R, Zhou B, Liu C, Wang K, Jiang R, Freyberg Z, Lv H, Xu M. Automatic localization and identification of mitochondria in cellular electron cryo-tomography using faster-RCNN. BMC Bioinformatics. 2019 Mar 29; 20(Suppl 3):132. PMID: 30925860.
    Citations: 10     Fields:    Translation:AnimalsCells
  14. Siegmund SE, Grassucci R, Carter SD, Barca E, Farino ZJ, Juanola-Falgarona M, Zhang P, Tanji K, Hirano M, Schon EA, Frank J, Freyberg Z. Three-Dimensional Analysis of Mitochondrial Crista Ultrastructure in a Patient with Leigh Syndrome by In Situ Cryoelectron Tomography. iScience. 2018 Aug 31; 6:83-91. PMID: 30240627; PMCID: PMC6137323.
    Citations: 18     
  15. Liao PC, Boldogh IR, Siegmund SE, Freyberg Z, Pon LA. Isolation of mitochondria from Saccharomyces cerevisiae using magnetic bead affinity purification. PLoS One. 2018; 13(4):e0196632. PMID: 29698455.
    Citations: 4     Fields:    Translation:AnimalsCells
  16. Ourahmane A, Sauer A, Nixon DE, Murphy C, Mondello M, Douglass Chiu E, Siegmund S, Wang JB, McVoy MA. A Guinea pig cytomegalovirus resistant to the DNA maturation inhibitor BDCRB. Antiviral Res. 2018 06; 154:44-50. PMID: 29649495.
    Citations:    Fields:    Translation:AnimalsCells
  17. Siegmund SE, Yang H, Sharma R, Javors M, Skinner O, Mootha V, Hirano M, Schon EA. Low-dose rapamycin extends lifespan in a mouse model of mtDNA depletion syndrome. Hum Mol Genet. 2017 12 01; 26(23):4588-4605. PMID: 28973153; PMCID: PMC5886265.
    Citations: 38     Fields:    Translation:AnimalsCells
  18. Piekutowska-Abramczuk D, Kocyla-Karczmarewicz B, Malkowska M, Luczak S, Iwanicka-Pronicka K, Siegmund S, Yang H, Wen Q, Hoang QV, Silverman RH, Kowalski P, Szczypinska O, Czornak K, Zimowski J, Ploski R, Pilch J, Ciara E, Zaremba J, Krajewska-Walasek M, Schon EA, Pronicka E. No Evidence for Association of SCO2 Heterozygosity with High-Grade Myopia or Other Diseases with Possible Mitochondrial Dysfunction. JIMD Rep. 2016; 27:63-8. PMID: 26427993; PMCID: PMC4864719.
    Citations: 3     
  19. Bienert MD, Siegmund SE, Drozak A, Trombik T, Bultreys A, Baldwin IT, Boutry M. A pleiotropic drug resistance transporter in Nicotiana tabacum is involved in defense against the herbivore Manduca sexta. Plant J. 2012 Dec; 72(5):745-57. PMID: 22804955.
    Citations: 22     Fields:    Translation:AnimalsCells
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Funded by the NIH National Center for Advancing Translational Sciences through its Clinical and Translational Science Awards Program, grant number UL1TR002541.