Harvard Catalyst Profiles

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Davood Karimi, Ph.D.

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Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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  1. Karimi D, Dou H, Warfield SK, Gholipour A. Deep learning with noisy labels: Exploring techniques and remedies in medical image analysis. Med Image Anal. 2020 Jun 20; 65:101759. PMID: 32623277.
    Citations:    
  2. Golshan M, Karimi D, Mahdavi S, Lobo J, Peacock M, Salcudean SE, Spadinger I. Automatic detection of brachytherapy seeds in 3D ultrasound images using a convolutional neural network. Phys Med Biol. 2020 02 05; 65(3):035016. PMID: 31860899.
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  3. Karimi D, Nir G, Fazli L, Black PC, Goldenberg L, Salcudean SE. Deep Learning-Based Gleason Grading of Prostate Cancer From Histopathology Images-Role of Multiscale Decision Aggregation and Data Augmentation. IEEE J Biomed Health Inform. 2020 May; 24(5):1413-1426. PMID: 31567104.
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  4. Karimi D, Salcudean SE. Reducing the Hausdorff Distance in Medical Image Segmentation With Convolutional Neural Networks. IEEE Trans Med Imaging. 2020 02; 39(2):499-513. PMID: 31329113.
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  5. Karimi D, Zeng Q, Mathur P, Avinash A, Mahdavi S, Spadinger I, Abolmaesumi P, Salcudean SE. Accurate and robust deep learning-based segmentation of the prostate clinical target volume in ultrasound images. Med Image Anal. 2019 10; 57:186-196. PMID: 31325722.
    Citations:    
  6. Nir G, Karimi D, Goldenberg SL, Fazli L, Skinnider BF, Tavassoli P, Turbin D, Villamil CF, Wang G, Thompson DJS, Black PC, Salcudean SE. Comparison of Artificial Intelligence Techniques to Evaluate Performance of a Classifier for Automatic Grading of Prostate Cancer From Digitized Histopathologic Images. JAMA Netw Open. 2019 03 01; 2(3):e190442. PMID: 30848813.
    Citations:    
  7. Nir G, Hor S, Karimi D, Fazli L, Skinnider BF, Tavassoli P, Turbin D, Villamil CF, Wang G, Wilson RS, Iczkowski KA, Lucia MS, Black PC, Abolmaesumi P, Goldenberg SL, Salcudean SE. Automatic grading of prostate cancer in digitized histopathology images: Learning from multiple experts. Med Image Anal. 2018 12; 50:167-180. PMID: 30340027.
    Citations:    Fields:    
  8. Karimi D, Samei G, Kesch C, Nir G, Salcudean SE. Prostate segmentation in MRI using a convolutional neural network architecture and training strategy based on statistical shape models. Int J Comput Assist Radiol Surg. 2018 Aug; 13(8):1211-1219. PMID: 29766373.
    Citations:    Fields:    
  9. Zeng Q, Samei G, Karimi D, Kesch C, Mahdavi SS, Abolmaesumi P, Salcudean SE. Prostate segmentation in transrectal ultrasound using magnetic resonance imaging priors. Int J Comput Assist Radiol Surg. 2018 Jun; 13(6):749-757. PMID: 29589259.
    Citations:    
  10. Karimi D, Ward RK. Patch-based models and algorithms for image processing: a review of the basic principles and methods, and their application in computed tomography. Int J Comput Assist Radiol Surg. 2016 Oct; 11(10):1765-77. PMID: 27287761.
    Citations:    
  11. Karimi D, Ward RK. Sinogram denoising via simultaneous sparse representation in learned dictionaries. Phys Med Biol. 2016 May 07; 61(9):3536-53. PMID: 27055224.
    Citations:    
  12. Karimi D, Ward R. Reducing streak artifacts in computed tomography via sparse representation in coupled dictionaries. Med Phys. 2016 Mar; 43(3):1473-86. PMID: 26936731.
    Citations:    
  13. Karimi D, Deman P, Ward R, Ford N. A sinogram denoising algorithm for low-dose computed tomography. BMC Med Imaging. 2016 Jan 22; 16:11. PMID: 26800667.
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  14. Karimi D, Ward R. A denoising algorithm for projection measurements in cone-beam computed tomography. Comput Biol Med. 2016 Feb 01; 69:71-82. PMID: 26735188.
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  15. Karimi D, Ward R. On the computational implementation of forward and back-projection operations for cone-beam computed tomography. Med Biol Eng Comput. 2016 Aug; 54(8):1193-204. PMID: 26438389.
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  16. MacGregor CA, Karimi D, Azarbarzin A, Moussavi Z. Statistical analysis of tracheal breath sounds during wakefulness for screening obstructive sleep apnea. Conf Proc IEEE Eng Med Biol Soc. 2013; 2013:4549-52. PMID: 24110746.
    Citations:    Fields:    Translation:Humans
  17. Shams E, Karimi D, Moussavi Z. Bispectral analysis of tracheal breath sounds for Obstructive Sleep Apnea. Conf Proc IEEE Eng Med Biol Soc. 2012; 2012:37-40. PMID: 23365826.
    Citations:    
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Funded by the NIH National Center for Advancing Translational Sciences through its Clinical and Translational Science Awards Program, grant number UL1TR002541.