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profileRon Kikinis, M.D.

TitleProfessor of Radiology, Part-time
InstitutionBrigham and Women's Hospital
DepartmentRadiology
AddressBrigham and Women's Hospital
Surgical Planning Laboratory, Dept. of Radiology
1249 Boylston St., Ste. 352
Boston MA 02215
Phone617/732-7389
Fax617/582-6033
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The research activities and funding listed below are automatically derived from NIH ExPORTER and other sources, which might result in incorrect or missing items. Faculty can login to make corrections and additions.
U24CA180918     (KIKINIS, RON)Sep 4, 2013 - Aug 31, 2018
NIH/NCI
Quantitative Image Informatics for Cancer Research (QIICR)
Role: Co-Principal Investigator

U41RR019703     (JOLESZ, FERENC A)Sep 29, 2005 - Jul 31, 2010
NIH/NCRR
IMAGE GUIDED THERAPY CENTER
Role: Co-Principal Investigator

U54EB005149     (KIKINIS, RON)Sep 17, 2004 - Jun 30, 2014
NIH/NIBIB
National Alliance for Medical Image Computing (NAMIC)
Role: Principal Investigator

P41RR012553     (JOHNSON, CHRISTOPHER R.)Sep 15, 1999 - Jul 31, 2015
NIH/NCRR
Center for Integrative Biomedical Computing
Role: Co-Principal Investigator

P41EB015902     (KIKINIS, RON)Sep 30, 1998 - May 31, 2018
NIH/NIBIB
Neuroimaging Analysis Center (NAC)
Role: Principal Investigator
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This researcher has shared information about their research resources
in the eagle-i Network. To update or add resource records, contact
eagle-i@hms.harvard.edu.
Surgical Planning Laboratory (BWH) - Core services (1) and Software (5)

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Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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  1. Halle M, Demeusy V, Kikinis R. The Open Anatomy Browser: A Collaborative Web-Based Viewer for Interoperable Anatomy Atlases. Front Neuroinform. 2017; 11:22. PMID: 28396633.
    View in: PubMed
  2. Black D, Hansen C, Nabavi A, Kikinis R, Hahn H. A Survey of auditory display in image-guided interventions. Int J Comput Assist Radiol Surg. 2017 Mar 08. PMID: 28275890.
    View in: PubMed
  3. Herrlich M, Tavakol P, Black D, Wenig D, Rieder C, Malaka R, Kikinis R. Instrument-mounted displays for reducing cognitive load during surgical navigation. Int J Comput Assist Radiol Surg. 2017 Feb 23. PMID: 28233166.
    View in: PubMed
  4. Black D, Hettig J, Luz M, Hansen C, Kikinis R, Hahn H. Auditory feedback to support image-guided medical needle placement. Int J Comput Assist Radiol Surg. 2017 Feb 17. PMID: 28213646.
    View in: PubMed
  5. Pujol S, Cabeen R, Sébille SB, Yelnik J, François C, Fernandez Vidal S, Karachi C, Zhao Y, Cosgrove GR, Jannin P, Kikinis R, Bardinet E. In vivo Exploration of the Connectivity between the Subthalamic Nucleus and the Globus Pallidus in the Human Brain Using Multi-Fiber Tractography. Front Neuroanat. 2016; 10:119. PMID: 28154527.
    View in: PubMed
  6. Chen X, Xu L, Wang H, Wang F, Wang Q, Kikinis R. Development of a surgical navigation system based on 3D Slicer for intraoperative implant placement surgery. Med Eng Phys. 2017 Mar; 41:81-89. PMID: 28109564.
    View in: PubMed
  7. Kapur T, Pieper S, Fedorov A, Fillion-Robin JC, Halle M, O'Donnell L, Lasso A, Ungi T, Pinter C, Finet J, Pujol S, Jagadeesan J, Tokuda J, Norton I, Estepar RS, Gering D, Aerts HJ, Jakab M, Hata N, Ibanez L, Blezek D, Miller J, Aylward S, Grimson WE, Fichtinger G, Wells WM, Lorensen WE, Schroeder W, Kikinis R. Increasing the impact of medical image computing using community-based open-access hackathons: The NA-MIC and 3D Slicer experience. Med Image Anal. 2016 Oct; 33:176-80. PMID: 27498015; PMCID: PMC5003088 [Available on 10/01/17].
  8. Fedorov A, Clunie D, Ulrich E, Bauer C, Wahle A, Brown B, Onken M, Riesmeier J, Pieper S, Kikinis R, Buatti J, Beichel RR. DICOM for quantitative imaging biomarker development: a standards based approach to sharing clinical data and structured PET/CT analysis results in head and neck cancer research. PeerJ. 2016; 4:e2057. PMID: 27257542; PMCID: PMC4888317.
  9. Li M, Miller K, Joldes GR, Kikinis R, Wittek A. Biomechanical model for computing deformations for whole-body image registration: A meshless approach. Int J Numer Method Biomed Eng. 2016 Dec; 32(12). PMID: 26791945.
    View in: PubMed
  10. Mehrtash A, Gupta SN, Shanbhag D, Miller JV, Kapur T, Fennessy FM, Kikinis R, Fedorov A. Bolus arrival time and its effect on tissue characterization with dynamic contrast-enhanced magnetic resonance imaging. J Med Imaging (Bellingham). 2016 Jan; 3(1):014503. PMID: 26989759; PMCID: PMC4773735 [Available on 03/01/17].
  11. Liu S, Cai W, Pujol S, Kikinis R, Feng DD. Cross-View Neuroimage Pattern Analysis in Alzheimer's Disease Staging. Front Aging Neurosci. 2016; 8:23. PMID: 26941639; PMCID: PMC4763344.
  12. Pujol S, Baldwin M, Nassiri J, Kikinis R, Shaffer K. Using 3D Modeling Techniques to Enhance Teaching of Difficult Anatomical Concepts. Acad Radiol. 2016 Apr; 23(4):507-16. PMID: 26897601; PMCID: PMC4808571.
  13. Wassermann D, Makris N, Rathi Y, Shenton M, Kikinis R, Kubicki M, Westin CF. The white matter query language: a novel approach for describing human white matter anatomy. Brain Struct Funct. 2016 Dec; 221(9):4705-4721. PMID: 26754839.
    View in: PubMed
  14. Zhang F, Song Y, Cai W, Hauptmann AG, Liu S, Pujol S, Kikinis R, Fulham MJ, Feng DD, Chen M. Dictionary Pruning with Visual Word Significance for Medical Image Retrieval. Neurocomputing. 2016 Feb 12; 177:75-88. PMID: 27688597.
    View in: PubMed
  15. Zhang F, Song Y, Cai W, Liu S, Liu S, Pujol S, Kikinis R, Xia Y, Fulham MJ, Feng DD. Pairwise Latent Semantic Association for Similarity Computation in Medical Imaging. IEEE Trans Biomed Eng. 2016 May; 63(5):1058-1069. PMID: 26372117.
    View in: PubMed
  16. Liu S, Cai W, Liu S, Zhang F, Fulham M, Feng D, Pujol S, Kikinis R. Multimodal neuroimaging computing: the workflows, methods, and platforms. Brain Inform. 2015; 2:181-195. PMID: 26870630.
    View in: PubMed
  17. Liu S, Cai W, Liu S, Zhang F, Fulham M, Feng D, Pujol S, Kikinis R. Multimodal neuroimaging computing: the workflows, methods, and platforms. Brain Inform. 2015 Sep; 2(3):181-195. PMID: 27747508.
    View in: PubMed
  18. Liu S, Cai W, Liu S, Zhang F, Fulham M, Feng D, Pujol S, Kikinis R. Multimodal neuroimaging computing: a review of the applications in neuropsychiatric disorders. Brain Inform. 2015 Sep; 2(3):167-180. PMID: 27747507.
    View in: PubMed
  19. Liu S, Cai W, Liu S, Zhang F, Fulham M, Feng D, Pujol S, Kikinis R. Multimodal neuroimaging computing: a review of the applications in neuropsychiatric disorders. Brain Inform. 2015; 2:167-180. PMID: 26870629.
    View in: PubMed
  20. Pujol S, Wells W, Pierpaoli C, Brun C, Gee J, Cheng G, Vemuri B, Commowick O, Prima S, Stamm A, Goubran M, Khan A, Peters T, Neher P, Maier-Hein KH, Shi Y, Tristan-Vega A, Veni G, Whitaker R, Styner M, Westin CF, Gouttard S, Norton I, Chauvin L, Mamata H, Gerig G, Nabavi A, Golby A, Kikinis R. The DTI Challenge: Toward Standardized Evaluation of Diffusion Tensor Imaging Tractography for Neurosurgery. J Neuroimaging. 2015 Nov-Dec; 25(6):875-82. PMID: 26259925; PMCID: PMC4641305 [Available on 11/01/16].
  21. Li M, Miller K, Joldes GR, Doyle B, Garlapati RR, Kikinis R, Wittek A. Patient-specific biomechanical model as whole-body CT image registration tool. Med Image Anal. 2015 May; 22(1):22-34. PMID: 25721296; PMCID: PMC4405489.
  22. Liu S, Liu S, Cai W, Che H, Pujol S, Kikinis R, Feng D, Fulham MJ. Multimodal neuroimaging feature learning for multiclass diagnosis of Alzheimer's disease. IEEE Trans Biomed Eng. 2015 Apr; 62(4):1132-40. PMID: 25423647; PMCID: PMC4394860.
  23. Horky LL, Gerbaudo VH, Zaitsev A, Plesniak W, Hainer J, Govindarajulu U, Kikinis R, Dietrich J. Systemic chemotherapy decreases brain glucose metabolism. Ann Clin Transl Neurol. 2014 Oct; 1(10):788-98. PMID: 25493270; PMCID: PMC4241806.
  24. Parmar C, Rios Velazquez E, Leijenaar R, Jermoumi M, Carvalho S, Mak RH, Mitra S, Shankar BU, Kikinis R, Haibe-Kains B, Lambin P, Aerts HJ. Robust Radiomics feature quantification using semiautomatic volumetric segmentation. PLoS One. 2014; 9(7):e102107. PMID: 25025374; PMCID: PMC4098900.
  25. Maier-Hein KH, Westin CF, Shenton ME, Weiner MW, Raj A, Thomann P, Kikinis R, Stieltjes B, Pasternak O. Widespread white matter degeneration preceding the onset of dementia. Alzheimers Dement. 2015 May; 11(5):485-493.e2. PMID: 25035154; PMCID: PMC4295016.
  26. Liu S, Cai W, Wen L, Feng DD, Pujol S, Kikinis R, Fulham MJ, Eberl S. Multi-Channel neurodegenerative pattern analysis and its application in Alzheimer's disease characterization. Comput Med Imaging Graph. 2014 Sep; 38(6):436-44. PMID: 24933011; PMCID: PMC4135007.
  27. Fitzsimmons J, Hamoda HM, Swisher T, Terry D, Rosenberger G, Seidman LJ, Goldstein J, Mesholam-Gately R, Petryshen T, Wojcik J, Kikinis R, Kubicki M. Diffusion tensor imaging study of the fornix in first episode schizophrenia and in healthy controls. Schizophr Res. 2014 Jul; 156(2-3):157-60. PMID: 24837684; PMCID: PMC4080801.
  28. Fedorov A, Wells WM, Kikinis R, Tempany CM, Vangel MG. Application of tolerance limits to the characterization of image registration performance. IEEE Trans Med Imaging. 2014 Jul; 33(7):1541-50. PMID: 24759985; PMCID: PMC4096345.
  29. Crabb MG, Davidson JL, Little R, Wright P, Morgan AR, Miller CA, Naish JH, Parker GJ, Kikinis R, McCann H, Lionheart WR. Mutual information as a measure of image quality for 3D dynamic lung imaging with EIT. Physiol Meas. 2014 May; 35(5):863-79. PMID: 24710978; PMCID: PMC4059506.
  30. Nakhmani A, Kikinis R, Tannenbaum A. MRI Brain Tumor Segmentation and Necrosis Detection Using Adaptive Sobolev Snakes. Proc SPIE Int Soc Opt Eng. 2014 Mar 21; 9034:903442. PMID: 25302005.
    View in: PubMed
  31. Chenevert TL, Malyarenko DI, Newitt D, Li X, Jayatilake M, Tudorica A, Fedorov A, Kikinis R, Liu TT, Muzi M, Oborski MJ, Laymon CM, Li X, Thomas Y, Jayashree KC, Mountz JM, Kinahan PE, Rubin DL, Fennessy F, Huang W, Hylton N, Ross BD. Errors in Quantitative Image Analysis due to Platform-Dependent Image Scaling. Transl Oncol. 2014 Feb; 7(1):65-71. PMID: 24772209; PMCID: PMC3998685.
  32. Huang W, Li X, Chen Y, Li X, Chang MC, Oborski MJ, Malyarenko DI, Muzi M, Jajamovich GH, Fedorov A, Tudorica A, Gupta SN, Laymon CM, Marro KI, Dyvorne HA, Miller JV, Barbodiak DP, Chenevert TL, Yankeelov TE, Mountz JM, Kinahan PE, Kikinis R, Taouli B, Fennessy F, Kalpathy-Cramer J. Variations of dynamic contrast-enhanced magnetic resonance imaging in evaluation of breast cancer therapy response: a multicenter data analysis challenge. Transl Oncol. 2014 Feb; 7(1):153-66. PMID: 24772219; PMCID: PMC3998693.
  33. Garlapati RR, Roy A, Joldes GR, Wittek A, Mostayed A, Doyle B, Warfield SK, Kikinis R, Knuckey N, Bunt S, Miller K. More accurate neuronavigation data provided by biomechanical modeling instead of rigid registration. J Neurosurg. 2014 Jun; 120(6):1477-83. PMID: 24460486; PMCID: PMC4386882.
  34. Velazquez ER, Parmar C, Jermoumi M, Mak RH, van Baardwijk A, Fennessy FM, Lewis JH, De Ruysscher D, Kikinis R, Lambin P, Aerts HJ. Volumetric CT-based segmentation of NSCLC using 3D-Slicer. Sci Rep. 2013 Dec 18; 3:3529. PMID: 24346241; PMCID: PMC3866632.
  35. Oyama R, Jakab M, Kikuchi A, Sugiyama T, Kikinis R, Pujol S. Towards improved ultrasound-based analysis and 3D visualization of the fetal brain using the 3D Slicer. Ultrasound Obstet Gynecol. 2013 Nov; 42(5):609-10. PMID: 23576282; PMCID: PMC4032474.
  36. Kikinis Z, Makris N, Finn CT, Bouix S, Lucia D, Coleman MJ, Tworog-Dube E, Kikinis R, Kucherlapati R, Shenton ME, Kubicki M. Genetic contributions to changes of fiber tracts of ventral visual stream in 22q11.2 deletion syndrome. Brain Imaging Behav. 2013 Sep; 7(3):316-25. PMID: 23612843; PMCID: PMC3796180.
  37. Estépar RS, Kinney GL, Black-Shinn JL, Bowler RP, Kindlmann GL, Ross JC, Kikinis R, Han MK, Come CE, Diaz AA, Cho MH, Hersh CP, Schroeder JD, Reilly JJ, Lynch DA, Crapo JD, Wells JM, Dransfield MT, Hokanson JE, Washko GR. Computed tomographic measures of pulmonary vascular morphology in smokers and their clinical implications. Am J Respir Crit Care Med. 2013 Jul 15; 188(2):231-9. PMID: 23656466; PMCID: PMC3778757.
  38. Mostayed A, Garlapati RR, Joldes GR, Wittek A, Roy A, Kikinis R, Warfield SK, Miller K. Biomechanical model as a registration tool for image-guided neurosurgery: evaluation against BSpline registration. Ann Biomed Eng. 2013 Nov; 41(11):2409-25. PMID: 23771299; PMCID: PMC3939696.
  39. Irimia A, Goh SY, Torgerson CM, Chambers MC, Kikinis R, Van Horn JD. Forward and inverse electroencephalographic modeling in health and in acute traumatic brain injury. Clin Neurophysiol. 2013 Nov; 124(11):2129-45. PMID: 23746499; PMCID: PMC3805748.
  40. Wassermann D, Makris N, Rathi Y, Shenton M, Kikinis R, Kubicki M, Westin CF. On describing human white matter anatomy: the white matter query language. Med Image Comput Comput Assist Interv. 2013; 16(Pt 1):647-54. PMID: 24505722; PMCID: PMC4029160.
  41. Liu S, Song Y, Cai W, Pujol S, Kikinis R, Wang X, Feng D. Multifold Bayesian kernelization in Alzheimer's diagnosis. Med Image Comput Comput Assist Interv. 2013; 16(Pt 2):303-10. PMID: 24579154; PMCID: PMC4017205.
  42. Liu S, Cai W, Song Y, Pujol S, Kikinis R, Wen L, Feng DD. Localized Sparse Code Gradient in Alzheimer's disease staging. Conf Proc IEEE Eng Med Biol Soc. 2013; 2013:5398-401. PMID: 24110956; PMCID: PMC4849882.
  43. Egger J, Kapur T, Fedorov A, Pieper S, Miller JV, Veeraraghavan H, Freisleben B, Golby AJ, Nimsky C, Kikinis R. GBM volumetry using the 3D Slicer medical image computing platform. Sci Rep. 2013; 3:1364. PMID: 23455483; PMCID: PMC3586703.
  44. Egger J, Kapur T, Nimsky C, Kikinis R. Pituitary adenoma volumetry with 3D Slicer. PLoS One. 2012; 7(12):e51788. PMID: 23240062; PMCID: PMC3519899.
  45. Pasternak O, Westin CF, Bouix S, Seidman LJ, Goldstein JM, Woo TU, Petryshen TL, Mesholam-Gately RI, McCarley RW, Kikinis R, Shenton ME, Kubicki M. Excessive extracellular volume reveals a neurodegenerative pattern in schizophrenia onset. J Neurosci. 2012 Nov 28; 32(48):17365-72. PMID: 23197727; PMCID: PMC3549332.
  46. Lemaire JJ, Golby A, Wells WM, Pujol S, Tie Y, Rigolo L, Yarmarkovich A, Pieper S, Westin CF, Jolesz F, Kikinis R. Extended Broca's area in the functional connectome of language in adults: combined cortical and subcortical single-subject analysis using fMRI and DTI tractography. Brain Topogr. 2013 Jul; 26(3):428-41. PMID: 23001727; PMCID: PMC3966184.
  47. Rosenberger G, Nestor PG, Oh JS, Levitt JJ, Kindleman G, Bouix S, Fitzsimmons J, Niznikiewicz M, Westin CF, Kikinis R, McCarley RW, Shenton ME, Kubicki M. Anterior limb of the internal capsule in schizophrenia: a diffusion tensor tractography study. Brain Imaging Behav. 2012 Sep; 6(3):417-25. PMID: 22415192; PMCID: PMC4128025.
  48. Irimia A, Wang B, Aylward SR, Prastawa MW, Pace DF, Gerig G, Hovda DA, Kikinis R, Vespa PM, Van Horn JD. Neuroimaging of structural pathology and connectomics in traumatic brain injury: Toward personalized outcome prediction. Neuroimage Clin. 2012; 1(1):1-17. PMID: 24179732; PMCID: PMC3757727.
  49. Kikinis Z, Asami T, Bouix S, Finn CT, Ballinger T, Tworog-Dube E, Kucherlapati R, Kikinis R, Shenton ME, Kubicki M. Reduced fractional anisotropy and axial diffusivity in white matter in 22q11.2 deletion syndrome: a pilot study. Schizophr Res. 2012 Oct; 141(1):35-9. PMID: 22863550; PMCID: PMC3462006.
  50. Gao Y, Kikinis R, Bouix S, Shenton M, Tannenbaum A. A 3D interactive multi-object segmentation tool using local robust statistics driven active contours. Med Image Anal. 2012 Aug; 16(6):1216-27. PMID: 22831773; PMCID: PMC3443290.
  51. Fedorov A, Beichel R, Kalpathy-Cramer J, Finet J, Fillion-Robin JC, Pujol S, Bauer C, Jennings D, Fennessy F, Sonka M, Buatti J, Aylward S, Miller JV, Pieper S, Kikinis R. 3D Slicer as an image computing platform for the Quantitative Imaging Network. Magn Reson Imaging. 2012 Nov; 30(9):1323-41. PMID: 22770690; PMCID: PMC3466397.
  52. Shenton ME, Hamoda HM, Schneiderman JS, Bouix S, Pasternak O, Rathi Y, Vu MA, Purohit MP, Helmer K, Koerte I, Lin AP, Westin CF, Kikinis R, Kubicki M, Stern RA, Zafonte R. A review of magnetic resonance imaging and diffusion tensor imaging findings in mild traumatic brain injury. Brain Imaging Behav. 2012 Jun; 6(2):137-92. PMID: 22438191; PMCID: PMC3803157.
  53. Fedorov A, Tuncali K, Fennessy FM, Tokuda J, Hata N, Wells WM, Kikinis R, Tempany CM. Image registration for targeted MRI-guided transperineal prostate biopsy. J Magn Reson Imaging. 2012 Oct; 36(4):987-92. PMID: 22645031; PMCID: PMC3434292.
  54. Van Horn JD, Irimia A, Torgerson CM, Chambers MC, Kikinis R, Toga AW. Mapping connectivity damage in the case of Phineas Gage. PLoS One. 2012; 7(5):e37454. PMID: 22616011; PMCID: PMC3353935.
  55. Steinert-Threlkeld S, Ardekani S, Mejino JL, Detwiler LT, Brinkley JF, Halle M, Kikinis R, Winslow RL, Miller MI, Ratnanather JT. Ontological labels for automated location of anatomical shape differences. J Biomed Inform. 2012 Jun; 45(3):522-7. PMID: 22490168; PMCID: PMC3371096.
  56. Irimia A, Chambers MC, Torgerson CM, Filippou M, Hovda DA, Alger JR, Gerig G, Toga AW, Vespa PM, Kikinis R, Van Horn JD. Patient-tailored connectomics visualization for the assessment of white matter atrophy in traumatic brain injury. Front Neurol. 2012; 3:10. PMID: 22363313; PMCID: PMC3275792.
  57. Estépar RS, Ross JC, Kindlmann GL, Diaz A, Okajima Y, Kikinis R, Westin CF, Silverman EK, Washko GG. AUTOMATIC AIRWAY ANALYSIS FOR GENOME-WIDE ASSOCIATION STUDIES IN COPD. Proc IEEE Int Symp Biomed Imaging. 2012; 1467-1470. PMID: 23744052.
    View in: PubMed
  58. Fedorov A, Li X, Pohl KM, Bouix S, Styner M, Addicott M, Wyatt C, Daunais JB, Wells WM, Kikinis R. Atlas-guided segmentation of vervet monkey brain MRI. Open Neuroimag J. 2011; 5:186-97. PMID: 22253661; PMCID: PMC3256578.
  59. Kapur T, Pieper S, Whitaker R, Aylward S, Jakab M, Schroeder W, Kikinis R. The National Alliance for Medical Image Computing, a roadmap initiative to build a free and open source software infrastructure for translational research in medical image analysis. J Am Med Inform Assoc. 2012 Mar-Apr; 19(2):176-80. PMID: 22081219; PMCID: PMC3277624.
  60. Irimia A, Chambers MC, Alger JR, Filippou M, Prastawa MW, Wang B, Hovda DA, Gerig G, Toga AW, Kikinis R, Vespa PM, Van Horn JD. Comparison of acute and chronic traumatic brain injury using semi-automatic multimodal segmentation of MR volumes. J Neurotrauma. 2011 Nov; 28(11):2287-306. PMID: 21787171; PMCID: PMC3218448.
  61. Tokuda J, Mamata H, Gill RR, Hata N, Kikinis R, Padera RF, Lenkinski RE, Sugarbaker DJ, Hatabu H. Impact of nonrigid motion correction technique on pixel-wise pharmacokinetic analysis of free-breathing pulmonary dynamic contrast-enhanced MR imaging. J Magn Reson Imaging. 2011 Apr; 33(4):968-73. PMID: 21448965; PMCID: PMC3069717.
  62. Pohl KM, Konukoglu E, Novellas S, Ayache N, Fedorov A, Talos IF, Golby A, Wells WM, Kikinis R, Black PM. A new metric for detecting change in slowly evolving brain tumors: validation in meningioma patients. Neurosurgery. 2011 Mar; 68(1 Suppl Operative):225-33. PMID: 21206318; PMCID: PMC3099129.
  63. Golby AJ, Kindlmann G, Norton I, Yarmarkovich A, Pieper S, Kikinis R. Interactive diffusion tensor tractography visualization for neurosurgical planning. Neurosurgery. 2011 Feb; 68(2):496-505. PMID: 21135713; PMCID: PMC3112275.
  64. Kubicki M, Alvarado JL, Westin CF, Tate DF, Markant D, Terry DP, Whitford TJ, De Siebenthal J, Bouix S, McCarley RW, Kikinis R, Shenton ME. Stochastic tractography study of Inferior Frontal Gyrus anatomical connectivity in schizophrenia. Neuroimage. 2011 Apr 15; 55(4):1657-64. PMID: 21256966; PMCID: PMC3073419.
  65. Dalca A, Danagoulian G, Kikinis R, Schmidt E, Golland P. Segmentation of nerve bundles and ganglia in spine MRI using particle filters. Med Image Comput Comput Assist Interv. 2011; 14(Pt 3):537-45. PMID: 22003741; PMCID: PMC3232745.
  66. Wassermann D, Rathi Y, Bouix S, Kubicki M, Kikinis R, Shenton M, Westin CF. White matter bundle registration and population analysis based on Gaussian processes. Inf Process Med Imaging. 2011; 22:320-32. PMID: 21761667; PMCID: PMC3140022.
  67. Kikinis R, Pieper S. 3D Slicer as a tool for interactive brain tumor segmentation. Conf Proc IEEE Eng Med Biol Soc. 2011; 2011:6982-4. PMID: 22255945; PMCID: PMC3991434.
  68. Levitt JJ, Kubicki M, Nestor PG, Ersner-Hershfield H, Westin CF, Alvarado JL, Kikinis R, Jolesz FA, McCarley RW, Shenton ME. A diffusion tensor imaging study of the anterior limb of the internal capsule in schizophrenia. Psychiatry Res. 2010 Dec 30; 184(3):143-50. PMID: 21055906; PMCID: PMC4043632.
  69. Kikinis Z, Fallon JH, Niznikiewicz M, Nestor P, Davidson C, Bobrow L, Pelavin PE, Fischl B, Yendiki A, McCarley RW, Kikinis R, Kubicki M, Shenton ME. Gray matter volume reduction in rostral middle frontal gyrus in patients with chronic schizophrenia. Schizophr Res. 2010 Nov; 123(2-3):153-9. PMID: 20822884; PMCID: PMC2975427.
  70. Scully M, Anderson B, Lane T, Gasparovic C, Magnotta V, Sibbitt W, Roldan C, Kikinis R, Bockholt HJ. An Automated Method for Segmenting White Matter Lesions through Multi-Level Morphometric Feature Classification with Application to Lupus. Front Hum Neurosci. 2010; 4:27. PMID: 20428508; PMCID: PMC2859868.
  71. Lee JW, Wen PY, Hurwitz S, Black P, Kesari S, Drappatz J, Golby AJ, Wells WM, Warfield SK, Kikinis R, Bromfield EB. Morphological characteristics of brain tumors causing seizures. Arch Neurol. 2010 Mar; 67(3):336-42. PMID: 20212231; PMCID: PMC2995444.
  72. Oguro S, Tokuda J, Elhawary H, Haker S, Kikinis R, Tempany CM, Hata N. MRI signal intensity based B-spline nonrigid registration for pre- and intraoperative imaging during prostate brachytherapy. J Magn Reson Imaging. 2009 Nov; 30(5):1052-8. PMID: 19856437; PMCID: PMC2801562.
  73. Mamisch TC, Kim YJ, Richolt J, Zilkens C, Kikinis R, Millis M, Kordelle J. Range of motion after computed tomography-based simulation of intertrochanteric corrective osteotomy in cases of slipped capital femoral epiphysis: comparison of uniplanar flexion osteotomy and multiplanar flexion, valgisation, and rotational osteotomies. J Pediatr Orthop. 2009 Jun; 29(4):336-40. PMID: 19461373; PMCID: PMC2699433.
  74. Kubicki M, Niznikiewicz M, Connor E, Ungar L, Nestor P, Bouix S, Dreusicke M, Kikinis R, McCarley R, Shenton M. Relationship Between White Matter Integrity, Attention, and Memory in Schizophrenia: A Diffusion Tensor Imaging Study. Brain Imaging Behav. 2009 Jun 01; 3(2):191-201. PMID: 20556231.
    View in: PubMed
  75. Kaban LB, Seldin EB, Kikinis R, Yeshwant K, Padwa BL, Troulis MJ. Clinical application of curvilinear distraction osteogenesis for correction of mandibular deformities. J Oral Maxillofac Surg. 2009 May; 67(5):996-1008. PMID: 19375009; PMCID: PMC2690634.
  76. Levitt JJ, Styner M, Niethammer M, Bouix S, Koo MS, Voglmaier MM, Dickey CC, Niznikiewicz MA, Kikinis R, McCarley RW, Shenton ME. Shape abnormalities of caudate nucleus in schizotypal personality disorder. Schizophr Res. 2009 May; 110(1-3):127-39. PMID: 19328654; PMCID: PMC2756791.
  77. Rubin DL, Talos IF, Halle M, Musen MA, Kikinis R. Computational neuroanatomy: ontology-based representation of neural components and connectivity. BMC Bioinformatics. 2009 Feb 05; 10 Suppl 2:S3. PMID: 19208191; PMCID: PMC2646240.
  78. Ross JC, Estépar RS, Díaz A, Westin CF, Kikinis R, Silverman EK, Washko GR. Lung extraction, lobe segmentation and hierarchical region assessment for quantitative analysis on high resolution computed tomography images. Med Image Comput Comput Assist Interv. 2009; 12(Pt 2):690-8. PMID: 20426172; PMCID: PMC3061233.
  79. Fitzsimmons J, Kubicki M, Smith K, Bushell G, Estepar RS, Westin CF, Nestor PG, Niznikiewicz MA, Kikinis R, McCarley RW, Shenton ME. Diffusion tractography of the fornix in schizophrenia. Schizophr Res. 2009 Jan; 107(1):39-46. PMID: 19046624; PMCID: PMC2646850.
  80. Kubicki M, Styner M, Bouix S, Gerig G, Markant D, Smith K, Kikinis R, McCarley RW, Shenton ME. Reduced interhemispheric connectivity in schizophrenia-tractography based segmentation of the corpus callosum. Schizophr Res. 2008 Dec; 106(2-3):125-31. PMID: 18829262; PMCID: PMC2630535.
  81. Lindig TM, Kumar V, Kikinis R, Pieper S, Schrödl F, Neuhuber WL, Brehmer A. Spiny versus stubby: 3D reconstruction of human myenteric (type I) neurons. Histochem Cell Biol. 2009 Jan; 131(1):1-12. PMID: 18807064; PMCID: PMC2756529.
  82. Rehman T, Haber E, Pohl KM, Haker S, Halle M, Talos F, Wald LL, Kikinis R, Tannenbaum A. Multimodal Registration of White Matter Brain Data via Optimal Mass Transport. Midas J. 2008 Sep; 2008:27-35. PMID: 28626844.
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  83. Konukoglu E, Wells WM, Novellas S, Ayache N, Kikinis R, Black PM, Pohl KM. MONITORING SLOWLY EVOLVING TUMORS. Proc IEEE Int Symp Biomed Imaging. 2008 May; 2008:812-815. PMID: 28593030.
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  84. Dinov ID, Rubin D, Lorensen W, Dugan J, Ma J, Murphy S, Kirschner B, Bug W, Sherman M, Floratos A, Kennedy D, Jagadish HV, Schmidt J, Athey B, Califano A, Musen M, Altman R, Kikinis R, Kohane I, Delp S, Parker DS, Toga AW. iTools: a framework for classification, categorization and integration of computational biology resources. PLoS One. 2008 May 28; 3(5):e2265. PMID: 18509477; PMCID: PMC2386255.
  85. Rosenberger G, Kubicki M, Nestor PG, Connor E, Bushell GB, Markant D, Niznikiewicz M, Westin CF, Kikinis R, J Saykin A, McCarley RW, Shenton ME. Age-related deficits in fronto-temporal connections in schizophrenia: a diffusion tensor imaging study. Schizophr Res. 2008 Jul; 102(1-3):181-8. PMID: 18504117; PMCID: PMC2684860.
  86. Richolt JA, Hata N, Kikinis R, Scale D, Millis MB. Quantitative evaluation of angular measurements on plain radiographs in patients with slipped capital femoral epiphysis: a 3-dimensional analysis of computed tomography-based computer models of 46 femora. J Pediatr Orthop. 2008 Apr-May; 28(3):291-6. PMID: 18362792.
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  87. Luebbers HT, Messmer P, Obwegeser JA, Zwahlen RA, Kikinis R, Graetz KW, Matthews F. Comparison of different registration methods for surgical navigation in cranio-maxillofacial surgery. J Craniomaxillofac Surg. 2008 Mar; 36(2):109-16. PMID: 18280173.
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  88. Pujol S, Kikinis R, Gollub R. Lowering the barriers inherent in translating advances in neuroimage analysis to clinical research applications. Acad Radiol. 2008 Jan; 15(1):114-8. PMID: 18078914; PMCID: PMC2234595.
  89. Talos IF, Rubin DL, Halle M, Musen M, Kikinis R. A prototype symbolic model of canonical functional neuroanatomy of the motor system. J Biomed Inform. 2008 Apr; 41(2):251-63. PMID: 18164666; PMCID: PMC2376098.
  90. Lesniak J, Tokuda J, Kikinis R, Burghart C, Hata N. A device guidance method for organ motion compensation in MRI-guided therapy. Phys Med Biol. 2007 Nov 07; 52(21):6427-38. PMID: 17951853.
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  91. Larsen S, Kikinis R, Talos IF, Weinstein D, Wells W, Golby A. Quantitative comparison of functional MRI and direct electrocortical stimulation for functional mapping. Int J Med Robot. 2007 Sep; 3(3):262-70. PMID: 17763497; PMCID: PMC3733359.
  92. Pohl KM, Bouix S, Nakamura M, Rohlfing T, McCarley RW, Kikinis R, Grimson WE, Shenton ME, Wells WM. A hierarchical algorithm for MR brain image parcellation. IEEE Trans Med Imaging. 2007 Sep; 26(9):1201-12. PMID: 17896593; PMCID: PMC2768067.
  93. Pohl KM, Fisher J, Bouix S, Shenton M, McCarley RW, Grimson WE, Kikinis R, Wells WM. Using the logarithm of odds to define a vector space on probabilistic atlases. Med Image Anal. 2007 Oct; 11(5):465-77. PMID: 17698403; PMCID: PMC2423493.
  94. Brem MH, Zamani AA, Riva R, Zou KH, Rumboldt Z, Hennig FF, Kikinis R, Norbash AM, Schoepf UJ. Multidetector CT of the paranasal sinus: potential for radiation dose reduction. Radiology. 2007 Jun; 243(3):847-52. PMID: 17517938.
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  95. Krissian K, Westin CF, Kikinis R, Vosburgh KG. Oriented speckle reducing anisotropic diffusion. IEEE Trans Image Process. 2007 May; 16(5):1412-24. PMID: 17491469.
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  96. Dimaio S, Kapur T, Cleary K, Aylward S, Kazanzides P, Vosburgh K, Ellis R, Duncan J, Farahani K, Lemke H, Peters T, Lorensen WB, Gobbi D, Haller J, Clarke LL, Pizer S, Taylor R, Galloway R, Fichtinger G, Hata N, Lawson K, Tempany C, Kikinis R, Jolesz F. Challenges in image-guided therapy system design. Neuroimage. 2007; 37 Suppl 1:S144-51. PMID: 17644360; PMCID: PMC3780776.
  97. Talos IF, Zou KH, Kikinis R, Jolesz FA. Volumetric assessment of tumor infiltration of adjacent white matter based on anatomic MRI and diffusion tensor tractography. Acad Radiol. 2007 Apr; 14(4):431-6. PMID: 17368212; PMCID: PMC2397554.
  98. Onitsuka T, McCarley RW, Kuroki N, Dickey CC, Kubicki M, Demeo SS, Frumin M, Kikinis R, Jolesz FA, Shenton ME. Occipital lobe gray matter volume in male patients with chronic schizophrenia: A quantitative MRI study. Schizophr Res. 2007 May; 92(1-3):197-206. PMID: 17350226; PMCID: PMC2396445.
  99. Matthews F, Trentz O, Jacob AL, Kikinis R, Jupiter JB, Messmer P. Protrusion of hardware impairs forearm rotation after olecranon fixation. A report of two cases. J Bone Joint Surg Am. 2007 Mar; 89(3):638-42. PMID: 17332114.
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  100. Messmer P, Matthews F, Jacob AL, Kikinis R, Regazzoni P, Noser H. A CT database for research, development and education: concept and potential. J Digit Imaging. 2007 Mar; 20(1):17-22. PMID: 16897321; PMCID: PMC3043884.
  101. Pujol S, Frerichs K, Norbash A, Kikinis R, Westin CF. Preliminary results of nonfluoroscopy-based 3D navigation for neurointerventional procedures. J Vasc Interv Radiol. 2007 Feb; 18(2):289-98. PMID: 17327564.
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  102. Brem MH, Pauser J, Yoshioka H, Brenning A, Stratmann J, Hennig FF, Kikinis R, Duryea J, Winalski CS, Lang P. Longitudinal in vivo reproducibility of cartilage volume and surface in osteoarthritis of the knee. Skeletal Radiol. 2007 Apr; 36(4):315-20. PMID: 17219231.
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  103. Von Spiczak J, Samset E, Dimaio S, Reitmayr G, Schmalstieg D, Burghart C, Kikinis R. Device connectivity for image-guided medical applications. Stud Health Technol Inform. 2007; 125:482-4. PMID: 17377332.
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  104. Sierra R, Dimaio SP, Wada J, Hata N, Székely G, Kikinis R, Jolesz F. Patient specific simulation and navigation of ventriculoscopic interventions. Stud Health Technol Inform. 2007; 125:433-5. PMID: 17377318.
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  105. Hata N, Piper S, Jolesz FA, Tempany CM, Black PM, Morikawa S, Iseki H, Hashizume M, Kikinis R. Application of open source image guided therapy software in MR-guided therapies. Med Image Comput Comput Assist Interv. 2007; 10(Pt 1):491-8. PMID: 18051095.
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  106. Pohl KM, Kikinis R, Wells WM. Active mean fields: solving the mean field approximation in the level set framework. Inf Process Med Imaging. 2007; 20:26-37. PMID: 17633686; PMCID: PMC3265334.
  107. DiMaio SP, Pieper S, Chinzei K, Hata N, Haker SJ, Kacher DF, Fichtinger G, Tempany CM, Kikinis R. Robot-assisted needle placement in open MRI: system architecture, integration and validation. Comput Aided Surg. 2007 Jan; 12(1):15-24. PMID: 17364655.
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  108. Pohl KM, Bouix S, Shenton ME, Grimson WE, Kikinis R. Automatic Segmentation Using Non-Rigid Registration. Med Image Comput Comput Assist Interv. 2007; 26(9):1201-1212. PMID: 20407623.
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  109. Kuroki N, Shenton ME, Salisbury DF, Hirayasu Y, Onitsuka T, Ersner-Hershfield H, Yurgelun-Todd D, Kikinis R, Jolesz FA, McCarley RW. Middle and inferior temporal gyrus gray matter volume abnormalities in first-episode schizophrenia: an MRI study. Am J Psychiatry. 2006 Dec; 163(12):2103-10. PMID: 17151161; PMCID: PMC2766919.
  110. Dimaio SP, Archip N, Hata N, Talos IF, Warfield SK, Majumdar A, Mcdannold N, Hynynen K, Morrison PR, Wells WM, Kacher DF, Ellis RE, Golby AJ, Black PM, Jolesz FA, Kikinis R. Image-guided neurosurgery at Brigham and Women's Hospital. IEEE Eng Med Biol Mag. 2006 Sep-Oct; 25(5):67-73. PMID: 17020201.
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  111. Bricault I, Kikinis R, Morrison PR, Vansonnenberg E, Tuncali K, Silverman SG. Liver metastases: 3D shape-based analysis of CT scans for detection of local recurrence after radiofrequency ablation. Radiology. 2006 Oct; 241(1):243-50. PMID: 16928977.
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  112. Das M, Sauer F, Schoepf UJ, Khamene A, Vogt SK, Schaller S, Kikinis R, vanSonnenberg E, Silverman SG. Augmented reality visualization for CT-guided interventions: system description, feasibility, and initial evaluation in an abdominal phantom. Radiology. 2006 Jul; 240(1):230-5. PMID: 16720866.
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  113. Wittek A, Miller K, Kikinis R, Warfield SK. Patient-specific model of brain deformation: application to medical image registration. J Biomech. 2007; 40(4):919-29. PMID: 16678834.
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  114. Talos IF, Zou KH, Ohno-Machado L, Bhagwat JG, Kikinis R, Black PM, Jolesz FA. Supratentorial low-grade glioma resectability: statistical predictive analysis based on anatomic MR features and tumor characteristics. Radiology. 2006 May; 239(2):506-13. PMID: 16641355; PMCID: PMC1475754.
  115. Verhey JF, Nathan NS, Rienhoff O, Kikinis R, Rakebrandt F, D'Ambra MN. Finite-element-method (FEM) model generation of time-resolved 3D echocardiographic geometry data for mitral-valve volumetry. Biomed Eng Online. 2006 Mar 03; 5:17. PMID: 16512925; PMCID: PMC1421418.
  116. Pohl KM, Fisher J, Grimson WE, Kikinis R, Wells WM. A Bayesian model for joint segmentation and registration. Neuroimage. 2006 May 15; 31(1):228-39. PMID: 16466677.
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  117. Ritter L, Yeshwant K, Seldin EB, Kaban LB, Gateno J, Keeve E, Kikinis R, Troulis MJ. Range of curvilinear distraction devices required for treatment of mandibular deformities. J Oral Maxillofac Surg. 2006 Feb; 64(2):259-64. PMID: 16413898.
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  118. DiMaio SP, Kacher DF, Ellis RE, Fichtinger G, Hata N, Zientara GP, Panych LP, Kikinis R, Jolesz FA. Needle artifact localization in 3T MR images. Stud Health Technol Inform. 2006; 119:120-5. PMID: 16404029.
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  119. Nikos Chrisochoides, Andriy Fedorov, Andriy Kot, Neculai Archip, Peter Black, Olivier Clatz, Alexandra Golby, Ron Kikinis, Simon K. Warfield. Real-Time Image Guided Neurosurgery Using Distributed and Grid Computing. 2006.
  120. Pieper S, Lorensen B, Schroeder W, Kikinis R. The NA-MIC Kit: ITK, VTK, Pipelines, Grids and 3D Slicer as An Open Platform for the Medical Image Computing Community. Proceedings of IEEE International Symposium on Biomedical Imaging: From Nano to Macro 2006. 2006; 698-701.
  121. Estépar RS, Washko GG, Silverman EK, Reilly JJ, Kikinis R, Westin CF. Accurate airway wall estimation using phase congruency. Med Image Comput Comput Assist Interv. 2006; 9(Pt 2):125-34. PMID: 17354764.
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  122. Pohl KM, Fisher J, Shenton M, McCarley RW, Grimson WE, Kikinis R, Wells WM. Logarithm odds maps for shape representation. Med Image Comput Comput Assist Interv. 2006; 9(Pt 2):955-63. PMID: 17354865; PMCID: PMC2994060.
  123. DiMaio SP, Pieper S, Chinzei K, Hata N, Balogh E, Fichtinger G, Tempany CM, Kikinis R. Robot-assisted needle placement in open-MRI: system architecture, integration and validation. Stud Health Technol Inform. 2006; 119:126-31. PMID: 16404030.
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  124. Fedorov A, Chrisochoides N, Kikinis R, Warfield S. An evaluation of three approaches to tetrahedral mesh generation for deformable registration of brain MR images. Proceedings of IEEE International Symposium on Biomedical Imaging: From Nano to Macro 2006. 2006; 658-661.
  125. Malhotra A, Huang Y, Fogel R, Lazic S, Pillar G, Jakab M, Kikinis R, White DP. Aging influences on pharyngeal anatomy and physiology: the predisposition to pharyngeal collapse. Am J Med. 2006 Jan; 119(1):72.e9-14. PMID: 16431197; PMCID: PMC2287192.
  126. Schreyer AG, Kikinis R. Combined PET/CT colonography: is this the way forward? Gut. 2006 Jan; 55(1):10-2. PMID: 16344572; PMCID: PMC1856362.
  127. Pohl K, Fisher J, Shenton M, McCarley R, Grimson EW, Kikinis R, Wells W. Logarithm Odds Maps for Shape Restoration. In: Proceedings of the Ninth International Conference on Medical Image Computing and Computer-Assisted Intervention. 2006; 955-963.
  128. MacFall JR, Taylor WD, Rex DE, Pieper S, Payne ME, McQuoid DR, Steffens DC, Kikinis R, Toga AW, Krishnan KR. Lobar distribution of lesion volumes in late-life depression: the Biomedical Informatics Research Network (BIRN). Neuropsychopharmacology. 2006 Jul; 31(7):1500-7. PMID: 16341022.
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  129. Zou KH, Greve DN, Wang M, Pieper SD, Warfield SK, White NS, Manandhar S, Brown GG, Vangel MG, Kikinis R, Wells WM. Reproducibility of functional MR imaging: preliminary results of prospective multi-institutional study performed by Biomedical Informatics Research Network. Radiology. 2005 Dec; 237(3):781-9. PMID: 16304101; PMCID: PMC1351264.
  130. Clatz O, Delingette H, Talos IF, Golby AJ, Kikinis R, Jolesz FA, Ayache N, Warfield SK. Robust nonrigid registration to capture brain shift from intraoperative MRI. IEEE Trans Med Imaging. 2005 Nov; 24(11):1417-27. PMID: 16279079; PMCID: PMC2042023.
  131. Davison BD, Yeshwant K, Kikinis R, Rolnick J, Zou K, Chung B, Yucel EK. Development and testing of a cross-sectional area measurement tool for evaluating vein size. Comput Biol Med. 2005 Oct; 35(7):617-26. PMID: 15809099.
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  132. Pohl KM, Fisher J, Kikinis R, Grimson WEL, Wells WM. Shape Based Segmentation of Anatomical Structures in Magnetic Resonance Images. Comput Vis Biomed Image Appl (2005). 2005 Oct; 3765:489-498. PMID: 28664197.
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  133. Kubicki M, Park H, Westin CF, Nestor PG, Mulkern RV, Maier SE, Niznikiewicz M, Connor EE, Levitt JJ, Frumin M, Kikinis R, Jolesz FA, McCarley RW, Shenton ME. DTI and MTR abnormalities in schizophrenia: analysis of white matter integrity. Neuroimage. 2005 Jul 15; 26(4):1109-18. PMID: 15878290; PMCID: PMC2768051.
  134. Kubicki M, McCarley R, Westin CF, Park HJ, Maier S, Kikinis R, Jolesz FA, Shenton ME. A review of diffusion tensor imaging studies in schizophrenia. J Psychiatr Res. 2007 Jan-Feb; 41(1-2):15-30. PMID: 16023676; PMCID: PMC2768134.
  135. Vaina LM, Cowey A, Jakab M, Kikinis R. Deficits of motion integration and segregation in patients with unilateral extrastriate lesions. Brain. 2005 Sep; 128(Pt 9):2134-45. PMID: 15975945.
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  136. Nakamura M, McCarley RW, Kubicki M, Dickey CC, Niznikiewicz MA, Voglmaier MM, Seidman LJ, Maier SE, Westin CF, Kikinis R, Shenton ME. Fronto-temporal disconnectivity in schizotypal personality disorder: a diffusion tensor imaging study. Biol Psychiatry. 2005 Sep 15; 58(6):468-78. PMID: 15978550; PMCID: PMC2768055.
  137. Verhey JF, Wisser J, Keller T, Westin CF, Kikinis R. Rigid overlay of volume sonography and MR image data of the female pelvic floor using a fiducial based alignment--feasibility due to a case series. Comput Med Imaging Graph. 2005 Jun; 29(4):243-9. PMID: 15890251.
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  138. Bartling SH, Peldschus K, Rodt T, Kral F, Matthies H, Kikinis R, Becker H. Registration and fusion of CT and MRI of the temporal bone. J Comput Assist Tomogr. 2005 May-Jun; 29(3):305-10. PMID: 15891495.
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  139. Verhey JF, Wisser J, Warfield SK, Rexilius J, Kikinis R. Non-rigid registration of a 3D ultrasound and a MR image data set of the female pelvic floor using a biomechanical model. Biomed Eng Online. 2005 Mar 18; 4:19. PMID: 15777475; PMCID: PMC1079899.
  140. Zou KH, Resnic FS, Talos IF, Goldberg-Zimring D, Bhagwat JG, Haker SJ, Kikinis R, Jolesz FA, Ohno-Machado L. A global goodness-of-fit test for receiver operating characteristic curve analysis via the bootstrap method. J Biomed Inform. 2005 Oct; 38(5):395-403. PMID: 16198998.
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  141. Pohl KM, Bouix S, Kikinis R, Grimson WEL. ANATOMICAL GUIDED SEGMENTATION WITH NON-STATIONARY TISSUE CLASS DISTRIBUTIONS IN AN EXPECTATION-MAXIMIZATION FRAMEWORK. Proc IEEE Int Symp Biomed Imaging. 2004 Apr; 2004:81-84. PMID: 28593029.
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  142. Yeshwant KC, Seldin EB, Kikinis R, Kaban LB. A computer-assisted approach to planning multidimensional distraction osteogenesis. Atlas Oral Maxillofac Surg Clin North Am. 2005 Mar; 13(1):1-12. PMID: 15820426.
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  143. Yeshwant K, Seldin EB, Gateno J, Everett P, White CL, Kikinis R, Kaban LB, Troulis MJ. Analysis of skeletal movements in mandibular distraction osteogenesis. J Oral Maxillofac Surg. 2005 Mar; 63(3):335-40. PMID: 15742283.
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  144. Golland P, Grimson WE, Shenton ME, Kikinis R. Detection and analysis of statistical differences in anatomical shape. Med Image Anal. 2005 Feb; 9(1):69-86. PMID: 15581813; PMCID: PMC2768070.
  145. Schreyer AG, Rath HC, Kikinis R, Völk M, Schölmerich J, Feuerbach S, Rogler G, Seitz J, Herfarth H. Comparison of magnetic resonance imaging colonography with conventional colonoscopy for the assessment of intestinal inflammation in patients with inflammatory bowel disease: a feasibility study. Gut. 2005 Feb; 54(2):250-6. PMID: 15647190; PMCID: PMC1774854.
  146. Schreyer AG, Rath HC, Kikinis R, Schlomerich J, Feuerbach S, Rogler G, Seitz J. Comparison of magnetic resonance imaging colonography with conventional colonoscopy for the assessment of intestinal inflammation in patients with inflammatory bowel disease: a feasibility study. Gut Journal. 2005; 54:250-256.
  147. Wittek A, Kikinis R, Warfield SK, Miller K. Brain shift computation using a fully nonlinear biomechanical model. Med Image Comput Comput Assist Interv. 2005; 8(Pt 2):583-90. PMID: 16686007.
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  149. Clatz O, Delingette H, Talos IF, Golby AJ, Kikinis R, Jolesz FA, Ayache N, Warfield SK. Hybrid formulation of the model-based non-rigid registration problem to improve accuracy and robustness. Med Image Comput Comput Assist Interv. 2005; 8(Pt 2):295-302. PMID: 16685972.
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  150. Wiegand LC, Warfield SK, Levitt JJ, Hirayasu Y, Salisbury DF, Heckers S, Bouix S, Schwartz D, Spencer M, Dickey CC, Kikinis R, Jolesz FA, McCarley RW, Shenton ME. An in vivo MRI study of prefrontal cortical complexity in first-episode psychosis. Am J Psychiatry. 2005 Jan; 162(1):65-70. PMID: 15625203; PMCID: PMC2768063.
  151. Pohl K, Fisher J, Levitt J, Shenton M, Kikinis R, Grimson W, Wells W. A Unifying Approach to Registration, Segmentation, and Intensity Corection. Duncan J, Gerig G, editors. Image Segmentation and Analysis I. 2005; 3749:310.
  152. Clatz O, Delingette H, Talos IF, Golby AJ, Kikinis R, Jolesz FA, Ayache N, Warfield SK. . Hybrid formulation of the model-based non-rigid registration problem to improve accuracy and robustness. Med Image Comput Comput Assist Interv Int Conf Med Image Comput Comput Assist Interv. 2005; 8:Part II; 295-302.
  153. 214. Wittek A, Kikinis R, Warfield SK, Miller K. Brain shift computation using a fully nonlinear biomechanical model. Med Image Comput Comput Assist Interv Int Conf Med Image Comput Comput Assist Interv. 2005; 8:Part II;583-90.
  154. Luboz V, Wu X, Krissian K, Westin CF, Kikinis R, Cotin S, Dawson S. A segmentation and reconstruction technique for 3D vascular structures. Med Image Comput Comput Assist Interv Int Conf Med Image Comput Comput Assist Interv. 2005; 8:Part I; 43-50.
  155. Luboz V, Wu X, Krissian K, Westin CF, Kikinis R, Cotin S, Dawson S. A Segmentation and Reconstruction Technique for 3D Vascular Structures. Duncan JS, Gerig G, editors. Vascular Image Segmentation. 2005; 43.
  156. Luboz V, Wu X, Krissian K, Westin CF, Kikinis R, Cotin S, Dawson S. A segmentation and reconstruction technique for 3D vascular structures. Med Image Comput Comput Assist Interv. 2005; 8(Pt 1):43-50. PMID: 16685827.
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  157. Pohl KM, Fisher J, Levitt JJ, Shenton ME, Kikinis R, Grimson WE, Wells WM. A unifying approach to registration, segmentation, and intensity correction. Med Image Comput Comput Assist Interv. 2005; 8(Pt 1):310-8. PMID: 16685860; PMCID: PMC2784666.
  158. Pohl K, Fisher J, Kikinis R, Grimson EW, Wells W. Shape Based Segmentation of Anatomical Structures in Magnetic Resonance Images. Proceeding of ICCV 2005: Computer Vision for Biomedical Image Applications: Current Techniques and Future Trend, An International Conference on Computer Vision Workshop. 2005.
  159. Warfield SK, Haker SJ, Talos IF, Kemper CA, Weisenfeld N, Mewes AU, Goldberg-Zimring D, Zou KH, Westin CF, Wells WM, Tempany CM, Golby A, Black PM, Jolesz FA, Kikinis R. Capturing intraoperative deformations: research experience at Brigham and Women's Hospital. Med Image Anal. 2005 Apr; 9(2):145-62. PMID: 15721230.
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  160. Kasai K, McCarley RW, Salisbury DF, Onitsuka T, Demeo S, Yurgelun-Todd D, Kikinis R, Jolesz FA, Shenton ME. Cavum septi pellucidi in first-episode schizophrenia and first-episode affective psychosis: an MRI study. Schizophr Res. 2004 Nov 01; 71(1):65-76. PMID: 15374574; PMCID: PMC2811876.
  161. McArdle JJ, Hamgami F, Jones K, Jolesz F, Kikinis R, Spiro A, Albert MS. Structural modeling of dynamic changes in memory and brain structure using longitudinal data from the normative aging study. J Gerontol B Psychol Sci Soc Sci. 2004 Nov; 59(6):P294-304. PMID: 15576857.
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  162. Onitsuka T, Shenton ME, Salisbury DF, Dickey CC, Kasai K, Toner SK, Frumin M, Kikinis R, Jolesz FA, McCarley RW. Middle and inferior temporal gyrus gray matter volume abnormalities in chronic schizophrenia: an MRI study. Am J Psychiatry. 2004 Sep; 161(9):1603-11. PMID: 15337650; PMCID: PMC2793337.
  163. Pichon E, Tannenbaum A, Kikinis R. A statistically based flow for image segmentation. Med Image Anal. 2004 Sep; 8(3):267-74. PMID: 15450221; PMCID: PMC3652279.
  164. Park HJ, Westin CF, Kubicki M, Maier SE, Niznikiewicz M, Baer A, Frumin M, Kikinis R, Jolesz FA, McCarley RW, Shenton ME. White matter hemisphere asymmetries in healthy subjects and in schizophrenia: a diffusion tensor MRI study. Neuroimage. 2004 Sep; 23(1):213-23. PMID: 15325368; PMCID: PMC2794419.
  165. Park HJ, Kubicki M, Westin CF, Talos IF, Brun A, Peiper S, Kikinis R, Jolesz FA, McCarley RW, Shenton ME. Method for combining information from white matter fiber tracking and gray matter parcellation. AJNR Am J Neuroradiol. 2004 Sep; 25(8):1318-24. PMID: 15466325; PMCID: PMC2813857.
  166. Pohl KM, Warfield SK, Kikinis R, Grimson WEL, Wells WM. Coupling Statistical Segmentation and PCA Shape Modeling. Med Image Comput Comput Assist Interv. 2004 Sep; 3216:151-159. PMID: 28603793.
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  167. Rodt T, Burmeister HP, Bartling S, Kaminsky J, Schwab B, Kikinis R, Becker H. [3D-Visualisation of the middle ear by computer-assisted post-processing of helical multi-slice CT data]. Laryngorhinootologie. 2004 Jul; 83(7):438-44. PMID: 15257492.
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  168. Ellsmere J, Stoll J, Wells W, Kikinis R, Vosburgh K, Kane R, Brooks D, Rattner D. A new visualization technique for laparoscopic ultrasonography. Surgery. 2004 Jul; 136(1):84-92. PMID: 15232543.
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  169. Park HJ, Levitt J, Shenton ME, Salisbury DF, Kubicki M, Kikinis R, Jolesz FA, McCarley RW. An MRI study of spatial probability brain map differences between first-episode schizophrenia and normal controls. Neuroimage. 2004 Jul; 22(3):1231-46. PMID: 15219595; PMCID: PMC2789267.
  170. Mocanu D, Kettenbach J, Sweeney MO, Kikinis R, Kenknight BH, Eisenberg SR. Patient-specific computational analysis of transvenous defibrillation: a comparison to clinical metrics in humans. Ann Biomed Eng. 2004 Jun; 32(6):775-83. PMID: 15255208.
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  171. Mocanu D, Kettenbach J, Sweeney MO, Kikinis R, Kenknight BH, Eisenberg SR. A comparison of biventricular and conventional transvenous defibrillation: a computational study using patient derived models. Pacing Clin Electrophysiol. 2004 May; 27(5):586-93. PMID: 15125713.
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  172. Zou KH, Wells WM, Kikinis R, Warfield SK. Three validation metrics for automated probabilistic image segmentation of brain tumours. Stat Med. 2004 Apr 30; 23(8):1259-82. PMID: 15083482; PMCID: PMC1463246.
  173. Schreyer AG, Fürst A, Agha A, Kikinis R, Scheibl K, Schölmerich J, Feuerbach S, Herfarth H, Seitz J. Magnetic resonance imaging based colonography for diagnosis and assessment of diverticulosis and diverticulitis. Int J Colorectal Dis. 2004 Sep; 19(5):474-80. PMID: 15088109.
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  174. Grau V, Mewes AU, Alcañiz M, Kikinis R, Warfield SK. Improved watershed transform for medical image segmentation using prior information. IEEE Trans Med Imaging. 2004 Apr; 23(4):447-58. PMID: 15084070.
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  175. Kubicki M, Maier SE, Westin CF, Mamata H, Ersner-Hershfield H, Estepar R, Kikinis R, Jolesz FA, McCarley RW, Shenton ME. Comparison of single-shot echo-planar and line scan protocols for diffusion tensor imaging. Acad Radiol. 2004 Feb; 11(2):224-32. PMID: 14974598; PMCID: PMC2793336.
  176. Zou KH, Warfield SK, Bharatha A, Tempany CM, Kaus MR, Haker SJ, Wells WM, Jolesz FA, Kikinis R. Statistical validation of image segmentation quality based on a spatial overlap index. Acad Radiol. 2004 Feb; 11(2):178-89. PMID: 14974593; PMCID: PMC1415224.
  177. Levitt JJ, Westin CF, Nestor PG, Estepar RS, Dickey CC, Voglmaier MM, Seidman LJ, Kikinis R, Jolesz FA, McCarley RW, Shenton ME. Shape of caudate nucleus and its cognitive correlates in neuroleptic-naive schizotypal personality disorder. Biol Psychiatry. 2004 Jan 15; 55(2):177-84. PMID: 14732598; PMCID: PMC2793335.
  178. Wiegand LC, Warfield SK, Levitt JJ, Hirayasu Y, Salisbury DF, Heckers S, Dickey CC, Kikinis R, Jolesz FA, McCarley RW, Shenton ME. Prefrontal cortical thickness in first-episode psychosis: a magnetic resonance imaging study. Biol Psychiatry. 2004 Jan 15; 55(2):131-40. PMID: 14732592; PMCID: PMC2794421.
  179. Koseki Y, Kikinis R, Jolesz F, Chinzei K. Precise Evaluation of Positioning Repeatability of MR-Compatible Manipulator Inside MRI. Proceedings of the 7th International Conference on Medical Image Computing and Computer-Assisted Intervention. 2004; (3217):192-199.
  180. Nakamura R, Tuncali K, Morrison P, Hata N, Silverman S, Kikinis R, Jolesz F, Zientara G. Control System for MR-Guided Cryotherapy Short-Term Prediction of Therapy Boundary Using Automatic Segmentation and 3D Optical Flow. Proceedings of the 7th International Conference on Medical Image Computing and Computer-Assisted Intervention. 2004; (3217):542-550.
  181. Bricault I, Kikinis R, vanSonnenberg E, Tuncali K, Silverman S. 3D Analysis of Radiofrequency-Ablated Tumors in Liver: A Computer-Aided Diagnosis Tool for Early Detection of Local Recurrences. Proceedings of the 7th International Conference on Medical Image Computing and Computer-Assisted Intervention. 2004; (3217):1042-1043.
  182. Pohl K, Warfield S, Kikinis R, Grimson EW, Wells W. Coupling Statistical Segmentation and PCA Shape Modeling. Proceedings of the 7th International Conference on Medical Image Computing and Computer-Assisted Intervention. 2004; 3217(LNCS):151-159.
  183. Dickhaus CF, Burghart C, Tempany C, D'Amico A, Haker S, Kikinis R, Woern H. Workflow modeling and analysis of computer guided prostate brachytherapy under MR imaging control. Stud Health Technol Inform. 2004; 98:72-4. PMID: 15544246.
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  184. Pieper S, Halle M, Kikinis R. 3D Slicer. Proceedings of IEEE International Symposium on Biomedical Imaging: From Nano to Macro 2004. 2004; 632-635.
  185. Zou K, Greve D, Wang M, Pieper S, Warfield S, White N, Vangel M, Kikinis R, Wells W III, FIRST BIRN. A Prospective Multi-Institutional Study of the Reproducibility of fMRI: A Preliminary Report from the Biomedical Informatics Research Network. Proceedings of the 7th International Conference on Medical Image Computing and Computer-Assisted Intervention. 2004; (3217):769-776.
  186. Kemper C, Talos IF, Golby A, Black P, Kikinis R, Grimson EW, Warfield S. An Anisotropic Material Model for Image Guided Neurosurgery. Proceedings of the 7th International Conference on Medical Image Computing and Computer-Assisted Intervention. 2004; (3217):267-275.
  187. Liu Y, Teverovskiy L, Carmichael O, Kikinis R, Shenton M, Carter C, Stenger AV, Davis S, Alzenstein H, Becker J, Lopez O, Meltzer C. Discriminative MR Image Feature Analysis for Automatic Schizophrenia and Alzheimer's Disease Classification. Proceedings of the 7th International Conference on Medical Image Computing and Computer-Assisted Intervention. 2004; (3216):393-400.
  188. Pohl K, Bouix S, Kikinis R, Grimson EW. Anatomical Guided Segmentation with Non-stationary Tissue Class Distributions in an Expectation-Maximization Framework. Proceedings of IEEE International Symposium on Biomedical Imaging: From Nano to Macro 2004. 2004; 81-84.
  189. Maddah M, Zou K, Wells W, Kikinis R, Warfield S. Automatic Optimization of Segmentation Algorithms Through Simultaneous Truth and Performance Level Estimation (STAPLE). Proceedings of the 7th International Conference on Medical Image Computing and Computer-Assisted Intervention. 2004; (3216):274-282.
  190. Park HJ, Kubicki M, Shenton ME, Guimond A, McCarley RW, Maier SE, Kikinis R, Jolesz FA, Westin CF. Spatial normalization of diffusion tensor MRI using multiple channels. Neuroimage. 2003 Dec; 20(4):1995-2009. PMID: 14683705; PMCID: PMC2811885.
  191. Zou KH, Warfield SK, Fielding JR, Tempany CM, William MW, Kaus MR, Jolesz FA, Kikinis R. Statistical validation based on parametric receiver operating characteristic analysis of continuous classification data. Acad Radiol. 2003 Dec; 10(12):1359-68. PMID: 14697004; PMCID: PMC1409756.
  192. Kubicki M, Westin CF, Nestor PG, Wible CG, Frumin M, Maier SE, Kikinis R, Jolesz FA, McCarley RW, Shenton ME. Cingulate fasciculus integrity disruption in schizophrenia: a magnetic resonance diffusion tensor imaging study. Biol Psychiatry. 2003 Dec 01; 54(11):1171-80. PMID: 14643084; PMCID: PMC2806222.
  193. Watanabe M, Kikinis R, Westin CF. Level set-based integration of segmentation and computational fluid dynamics for flow correction in phase contrast angiography. Acad Radiol. 2003 Dec; 10(12):1416-23. PMID: 14697009.
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  194. Kubicki M, McCarley RW, Nestor PG, Huh T, Kikinis R, Shenton ME, Wible CG. An fMRI study of semantic processing in men with schizophrenia. Neuroimage. 2003 Dec; 20(4):1923-33. PMID: 14683698; PMCID: PMC2806220.
  195. Kasai K, Shenton ME, Salisbury DF, Onitsuka T, Toner SK, Yurgelun-Todd D, Kikinis R, Jolesz FA, McCarley RW. Differences and similarities in insular and temporal pole MRI gray matter volume abnormalities in first-episode schizophrenia and affective psychosis. Arch Gen Psychiatry. 2003 Nov; 60(11):1069-77. PMID: 14609882.
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  196. Kasai K, Shenton ME, Salisbury DF, Hirayasu Y, Onitsuka T, Spencer MH, Yurgelun-Todd DA, Kikinis R, Jolesz FA, McCarley RW. Progressive decrease of left Heschl gyrus and planum temporale gray matter volume in first-episode schizophrenia: a longitudinal magnetic resonance imaging study. Arch Gen Psychiatry. 2003 Aug; 60(8):766-75. PMID: 12912760; PMCID: PMC2901861.
  197. Onitsuka T, Shenton ME, Kasai K, Nestor PG, Toner SK, Kikinis R, Jolesz FA, McCarley RW. Fusiform gyrus volume reduction and facial recognition in chronic schizophrenia. Arch Gen Psychiatry. 2003 Apr; 60(4):349-55. PMID: 12695311.
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  198. Fogel RB, Malhotra A, Dalagiorgou G, Robinson MK, Jakab M, Kikinis R, Pittman SD, White DP. Anatomic and physiologic predictors of apnea severity in morbidly obese subjects. Sleep. 2003 Mar 15; 26(2):150-5. PMID: 12683472.
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  199. Jaume S, Ferrant M, Macq B, Hoyte L, Fielding JR, Schreyer A, Kikinis R, Warfield SK. Tumor detection in the bladder wall with a measurement of abnormal thickness in CT scans. IEEE Trans Biomed Eng. 2003 Mar; 50(3):383-90. PMID: 12669995.
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  200. Ellsmere J, Stoll J, Rattner D, Brooks D, Kane R, Wells W III, Kikinis R, Vosburgh K. A Navigation System for Augmenting Laparoscopic Ultrasound. 2003.
  201. San-Jose R, Martin-Fernandez M, Alberola-Lopez C, Ellsmere J, Kikinis R, Westin CF. Freehand ultrasound reconstruction based on roi prior modeling and normalized convolution. RE Ellis, TM Peters, eds., Sixth International Conference on Medical Image Computing and Computer-Assisted Intervention. 2003; 2879(Lecture Notes in Computer Scie):382-390.
  202. Grau V, Kikinis R, Alcaniz M, Warfield S. Cortical Gray Matter Segmentation using an Improved Watershed Transform. Proceedings of the 25th Annual International Conference of the IEEE Engineering in Medicine and Biology Society. 2003.
  203. Nabavi A, Gering DT, Kacher DF, Talos IF, Wells WM, Kikinis R, Black PM, Jolesz FA. Surgical navigation in the open MRI. Acta Neurochir Suppl. 2003; 85:121-5. PMID: 12570147.
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  204. Welsch G, Mamisch TC, Kikinis R, Schmidt R, Lang P, Forst R, Fitz W. CT-based preoperative analysis of scapula morphology and glenohumeral joint geometry. Comput Aided Surg. 2003; 8(5):264-8. PMID: 15529956.
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  205. A Navigation System for Augmenting Laparoscopic Ultrasound. Proceedings of the 6th International Conference on Medical Image Computing and Computer-Assisted Intervention (MICCAI'2003). 2003; 184-191.
  206. Krissian K, Ellsmere J, Vosburgh K, Kikinis R, Westin CF. Multiscale segmentation of the aorta in 3d ultrasound images. 25th Annual Int. Conf. of the IEEE Engineering in Medicine and Biology Society (EMBS). 2003; 638-641.
  207. Kasai K, Shenton ME, Salisbury DF, Hirayasu Y, Lee CU, Ciszewski AA, Yurgelun-Todd D, Kikinis R, Jolesz FA, McCarley RW. Progressive decrease of left superior temporal gyrus gray matter volume in patients with first-episode schizophrenia. Am J Psychiatry. 2003 Jan; 160(1):156-64. PMID: 12505815; PMCID: PMC2845847.
  208. Talos IF, O'Donnell L, Westin CF, Warfield SK, Wells WM, Yoo SS, Panych L, Golby A, Mamata H, Maier SE, Ratiu P, Guttmann CG, Black PML, Jolesz FA, Kikinis R. Diffusion tensor and functional MRI fusion with anatomical mri for image guided neurosurgery. Sixth International Conference on Medical Image Computing and Computer-Assisted Intervention. 2003; 407-415.
  209. Ferrant M, Nabavi A, Macq B, Black PM, Jolesz FA, Kikinis R, Warfield SK. Serial registration of intraoperative MR images of the brain. Med Image Anal. 2002 Dec; 6(4):337-59. PMID: 12426109.
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  210. Kubicki M, Shenton ME, Salisbury DF, Hirayasu Y, Kasai K, Kikinis R, Jolesz FA, McCarley RW. Voxel-based morphometric analysis of gray matter in first episode schizophrenia. Neuroimage. 2002 Dec; 17(4):1711-9. PMID: 12498745; PMCID: PMC2845166.
  211. Malhotra A, Huang Y, Fogel RB, Pillar G, Edwards JK, Kikinis R, Loring SH, White DP. The male predisposition to pharyngeal collapse: importance of airway length. Am J Respir Crit Care Med. 2002 Nov 15; 166(10):1388-95. PMID: 12421747.
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  212. Kubicki M, Westin CF, Maier SE, Mamata H, Frumin M, Ersner-Hershfield H, Kikinis R, Jolesz FA, McCarley R, Shenton ME. Diffusion tensor imaging and its application to neuropsychiatric disorders. Harv Rev Psychiatry. 2002 Nov-Dec; 10(6):324-36. PMID: 12485979; PMCID: PMC2853779.
  213. Pohl KM, Wells WM, Guimond A, Kasai K, Shenton ME, Kikinis R, Grimson WEL, Warfield SK. Incorporating Non-rigid Registration into Expectation Maximization Algorithm to Segment MR Images. Med Image Comput Comput Assist Interv. 2002 Sep; 2488:564-571. PMID: 28626841.
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  214. Schreyer AG, Herfarth H, Kikinis R, Seitz J, Schölmerich J, Geissler A, Feuerbach S. 3D modeling and virtual endoscopy of the small bowel based on magnetic resonance imaging in patients with inflammatory bowel disease. Invest Radiol. 2002 Sep; 37(9):528-33. PMID: 12218449.
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  215. Lee CU, Shenton ME, Salisbury DF, Kasai K, Onitsuka T, Dickey CC, Yurgelun-Todd D, Kikinis R, Jolesz FA, McCarley RW. Fusiform gyrus volume reduction in first-episode schizophrenia: a magnetic resonance imaging study. Arch Gen Psychiatry. 2002 Sep; 59(9):775-81. PMID: 12215076.
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  216. Vaina LM, Cowey A, LeMay M, Bienfang DC, Kikinis R. Visual deficits in a patient with 'kaleidoscopic disintegration of the visual world'. Eur J Neurol. 2002 Sep; 9(5):463-77. PMID: 12220377.
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  217. Shenton ME, Gerig G, McCarley RW, Székely G, Kikinis R. Amygdala-hippocampal shape differences in schizophrenia: the application of 3D shape models to volumetric MR data. Psychiatry Res. 2002 Aug 20; 115(1-2):15-35. PMID: 12165365; PMCID: PMC2824647.
  218. Rodt T, Ratiu P, Becker H, Bartling S, Kacher DF, Anderson M, Jolesz FA, Kikinis R. 3D visualisation of the middle ear and adjacent structures using reconstructed multi-slice CT datasets, correlating 3D images and virtual endoscopy to the 2D cross-sectional images. Neuroradiology. 2002 Sep; 44(9):783-90. PMID: 12221454.
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  219. Troulis MJ, Everett P, Seldin EB, Kikinis R, Kaban LB. Development of a three-dimensional treatment planning system based on computed tomographic data. Int J Oral Maxillofac Surg. 2002 Aug; 31(4):349-57. PMID: 12361065.
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  220. Hirose M, Bharatha A, Hata N, Zou KH, Warfield SK, Cormack RA, D'Amico A, Kikinis R, Jolesz FA, Tempany CM. Quantitative MR imaging assessment of prostate gland deformation before and during MR imaging-guided brachytherapy. Acad Radiol. 2002 Aug; 9(8):906-12. PMID: 12186439.
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  221. Levitt JJ, McCarley RW, Dickey CC, Voglmaier MM, Niznikiewicz MA, Seidman LJ, Hirayasu Y, Ciszewski AA, Kikinis R, Jolesz FA, Shenton ME. MRI study of caudate nucleus volume and its cognitive correlates in neuroleptic-naive patients with schizotypal personality disorder. Am J Psychiatry. 2002 Jul; 159(7):1190-7. PMID: 12091198; PMCID: PMC2826363.
  222. Westin CF, Maier SE, Mamata H, Nabavi A, Jolesz FA, Kikinis R. Processing and visualization for diffusion tensor MRI. Med Image Anal. 2002 Jun; 6(2):93-108. PMID: 12044998.
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  223. Ruiz-Alzola J, Westin CF, Warfield SK, Alberola C, Maier S, Kikinis R. Nonrigid registration of 3D tensor medical data. Med Image Anal. 2002 Jun; 6(2):143-61. PMID: 12045001.
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  224. Kubicki M, Westin CF, Maier SE, Frumin M, Nestor PG, Salisbury DF, Kikinis R, Jolesz FA, McCarley RW, Shenton ME. Uncinate fasciculus findings in schizophrenia: a magnetic resonance diffusion tensor imaging study. Am J Psychiatry. 2002 May; 159(5):813-20. PMID: 11986136; PMCID: PMC2803760.
  225. Frumin M, Golland P, Kikinis R, Hirayasu Y, Salisbury DF, Hennen J, Dickey CC, Anderson M, Jolesz FA, Grimson WE, McCarley RW, Shenton ME. Shape differences in the corpus callosum in first-episode schizophrenia and first-episode psychotic affective disorder. Am J Psychiatry. 2002 May; 159(5):866-8. PMID: 11986146; PMCID: PMC2845853.
  226. Killiany RJ, Hyman BT, Gomez-Isla T, Moss MB, Kikinis R, Jolesz F, Tanzi R, Jones K, Albert MS. MRI measures of entorhinal cortex vs hippocampus in preclinical AD. Neurology. 2002 Apr 23; 58(8):1188-96. PMID: 11971085.
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  227. McCarley RW, Salisbury DF, Hirayasu Y, Yurgelun-Todd DA, Tohen M, Zarate C, Kikinis R, Jolesz FA, Shenton ME. Association between smaller left posterior superior temporal gyrus volume on magnetic resonance imaging and smaller left temporal P300 amplitude in first-episode schizophrenia. Arch Gen Psychiatry. 2002 Apr; 59(4):321-31. PMID: 11926932.
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  228. Fielding JR, Hoyte L, Okon SA, Schreyer A, Lee J, Zou KH, Warfield S, Richie JP, Loughlin KR, O'Leary MP, Doyle CJ, Kikinis R. Tumor detection by virtual cystoscopy with color mapping of bladder wall thickness. J Urol. 2002 Feb; 167(2 Pt 1):559-62. PMID: 11792918.
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  229. Benson RR, Guttmann CR, Wei X, Warfield SK, Hall C, Schmidt JA, Kikinis R, Wolfson LI. Older people with impaired mobility have specific loci of periventricular abnormality on MRI. Neurology. 2002 Jan 08; 58(1):48-55. PMID: 11781405.
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  230. Mamata H, Mamata Y, Westin CF, Shenton ME, Kikinis R, Jolesz FA, Maier SE. High-resolution line scan diffusion tensor MR imaging of white matter fiber tract anatomy. AJNR Am J Neuroradiol. 2002 Jan; 23(1):67-75. PMID: 11827877; PMCID: PMC2845164.
  231. Timoner SJ, Golland P, Kikinis R, Shenton ME, Grimson WEL, Wells III WM. Performance issues in shape classification. Proceedings of Medical Image Computing and Computer-Assisted Intervention – MICCAI 2002, 5th International Conference. 2002; Part I; 355-362.
  232. Gering DT, Grimson WEL, Kikinis R. Recognizing deviations from normalcy for brain tumor segmentation. Proceedings of Medical Image Computing and Computer-Assisted Intervention – MICCAI 2002, 5th International Conference. 2002; Part I; 388-395.
  233. Kohl KM, Wells WM, Guimond A, Kasai K, Shenton ME, Kikinis R, Grimson WEL, Warfied SK. . Incorporating non-rigid registration into expectation maximization algorithm to segment MR images. Proceedings of Medical Image Computing and Computer-Assisted Intervention – MICCAI 2002, 5th International Conference. 2002; Part I; 564-571.
  234. Zou KH, Wells III WM, Kaus MR, Kikinis R, Jolesz FA, Warfield SK. Statistical validation of automated probabilistic segmentation against composite latent expert ground truth in MR Imaging of brain tumors. Proceedings of Medical Image Computing and Computer-Assisted Intervention – MICCAI 2002, 5th International Conference. 2002; Part I; 315-322.
  235. Golland P, Fischl B, Spiridon M, Kanwisher N, Buckner RL, Shenton ME, Kikinis R, Dale A, Grimson WEL. . Discriminative analysis for image-based studies. Proceedings of Medical Image Computing and Computer-Assisted Intervention – MICCAI 2002, 5th International Conference. 2002; Part I; 508-515.
  236. 62. Nain D, Haker S, Grimson WEL, Cosman Jr E, Wells WW, Ji H, Kikinis R, Westin CF. . Intra-patient prone to supine colon registration for synchronized virtual colonoscopy. Proceedings of Medical Image Computing and Computer-Assisted Intervention – MICCAI 2002, 5th International Conference. 2002; Part II; 573-580.
  237. Watanabe M, Kikinis R, Westin CF. . Level set based integration of segmentation and computational fluid dynamics for flow correction in phase contrast angiography. Proceedings of Medical Image Computing and Computer-Assisted Intervention – MICCAI 2002, 5th International Conference. 2002; Part II; 405-412.
  238. Bjornemo M, Brun A, Kikinis R, Westin CF. . Regularized stochastic white matter tractography using diffusion tensor MRI. Proceedings of Medical Image Computing and Computer-Assisted Intervention – MICCAI 2002, 5th International Conference. 2002; Part I; 435-442.
  239. Dohi, T., and Ron Kikinis (Eds.). Medical Image Computing and Computer-Assisted Intervention- MICCAI 2002, 5th International Conference, Tokyo, Japan, September 2002 Proceedings (Parts 1 and 2). 2002.
  240. Ferrant M, Nabavi A, Macq B, Jolesz FA, Kikinis R, Warfield SK. Registration of 3-D intraoperative MR images of the brain using a finite-element biomechanical model. IEEE Trans Med Imaging. 2001 Dec; 20(12):1384-97. PMID: 11811838.
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  241. Bharatha A, Hirose M, Hata N, Warfield SK, Ferrant M, Zou KH, Suarez-Santana E, Ruiz-Alzola J, D'Amico A, Cormack RA, Kikinis R, Jolesz FA, Tempany CM. Evaluation of three-dimensional finite element-based deformable registration of pre- and intraoperative prostate imaging. Med Phys. 2001 Dec; 28(12):2551-60. PMID: 11797960.
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  242. Wible CG, Anderson J, Shenton ME, Kricun A, Hirayasu Y, Tanaka S, Levitt JJ, O'Donnell BF, Kikinis R, Jolesz FA, McCarley RW. Prefrontal cortex, negative symptoms, and schizophrenia: an MRI study. Psychiatry Res. 2001 Nov 30; 108(2):65-78. PMID: 11738541; PMCID: PMC2845854.
  243. Jolesz FA, Kikinis R, Talos IF. Neuronavigation in interventional MR imaging. Frameless stereotaxy. Neuroimaging Clin N Am. 2001 Nov; 11(4):685-93, ix. PMID: 11995423.
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  244. Gugino LD, Romero JR, Aglio L, Titone D, Ramirez M, Pascual-Leone A, Grimson E, Weisenfeld N, Kikinis R, Shenton ME. Transcranial magnetic stimulation coregistered with MRI: a comparison of a guided versus blind stimulation technique and its effect on evoked compound muscle action potentials. Clin Neurophysiol. 2001 Oct; 112(10):1781-92. PMID: 11595135; PMCID: PMC2845153.
  245. Ruiz-Alzola J, Kikinis R, Westin CF. Detection of point landmarks in multidimensional tensor data. Signal Processing. 2001 Oct; 81(10):2243-2247. PMID: 26005233.
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  246. Lorigo LM, Faugeras OD, Grimson WE, Keriven R, Kikinis R, Nabavi A, Westin CF. CURVES: curve evolution for vessel segmentation. Med Image Anal. 2001 Sep; 5(3):195-206. PMID: 11524226.
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  247. Hoyte L, Fielding JR, Versi E, Mamisch C, Kolvenbach C, Kikinis R. Variations in levator ani volume and geometry in women: the application of MR based 3D reconstruction in evaluating pelvic floor dysfunction. Arch Esp Urol. 2001 Jul-Aug; 54(6):532-9. PMID: 11512397.
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  248. Westin CF, Wigström L, Loock T, Sjöqvist L, Kikinis R, Knutsson H. Three-dimensional adaptive filtering in magnetic resonance angiography. J Magn Reson Imaging. 2001 Jul; 14(1):63-71. PMID: 11436216.
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  249. Hata N, Jinzaki M, Kacher D, Cormak R, Gering D, Nabavi A, Silverman SG, D'Amico AV, Kikinis R, Jolesz FA, Tempany CM. MR imaging-guided prostate biopsy with surgical navigation software: device validation and feasibility. Radiology. 2001 Jul; 220(1):263-8. PMID: 11426008.
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  250. Wible CG, Kubicki M, Yoo SS, Kacher DF, Salisbury DF, Anderson MC, Shenton ME, Hirayasu Y, Kikinis R, Jolesz FA, McCarley RW. A functional magnetic resonance imaging study of auditory mismatch in schizophrenia. Am J Psychiatry. 2001 Jun; 158(6):938-43. PMID: 11384903; PMCID: PMC2845157.
  251. Gering DT, Nabavi A, Kikinis R, Hata N, O'Donnell LJ, Grimson WE, Jolesz FA, Black PM, Wells WM. An integrated visualization system for surgical planning and guidance using image fusion and an open MR. J Magn Reson Imaging. 2001 Jun; 13(6):967-75. PMID: 11382961.
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  252. Schierlitz L, Dumanli H, Robinson JN, Burrows PE, Schreyer AG, Kikinis R, Jolesz FA, Tempany CM. Three-dimensional magnetic resonance imaging of fetal brains. Lancet. 2001 Apr 14; 357(9263):1177-8. PMID: 11323047.
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  253. Nabavi A, Black PM, Gering DT, Westin CF, Mehta V, Pergolizzi RS, Ferrant M, Warfield SK, Hata N, Schwartz RB, Wells WM, Kikinis R, Jolesz FA. Serial intraoperative magnetic resonance imaging of brain shift. Neurosurgery. 2001 Apr; 48(4):787-97; discussion 797-8. PMID: 11322439.
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  254. Hirayasu Y, Tanaka S, Shenton ME, Salisbury DF, DeSantis MA, Levitt JJ, Wible C, Yurgelun-Todd D, Kikinis R, Jolesz FA, McCarley RW. Prefrontal gray matter volume reduction in first episode schizophrenia. Cereb Cortex. 2001 Apr; 11(4):374-81. PMID: 11278200.
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  255. Hüppi PS, Murphy B, Maier SE, Zientara GP, Inder TE, Barnes PD, Kikinis R, Jolesz FA, Volpe JJ. Microstructural brain development after perinatal cerebral white matter injury assessed by diffusion tensor magnetic resonance imaging. Pediatrics. 2001 Mar; 107(3):455-60. PMID: 11230582.
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  256. Kordelle J, Millis M, Jolesz FA, Kikinis R, Richolt JA. Three-dimensional analysis of the proximal femur in patients with slipped capital femoral epiphysis based on computed tomography. J Pediatr Orthop. 2001 Mar-Apr; 21(2):179-82. PMID: 11242246.
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  257. Kordelle J, Richolt JA, Millis M, Jolesz FA, Kikinis R. Development of the acetabulum in patients with slipped capital femoral epiphysis: a three-dimensional analysis based on computed tomography. J Pediatr Orthop. 2001 Mar-Apr; 21(2):174-8. PMID: 11242245.
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  258. Mórocz IA, Zientara GP, Gudbjartsson H, Muza S, Lyons T, Rock PB, Kikinis R, Jólesz FA. Volumetric quantification of brain swelling after hypobaric hypoxia exposure. Exp Neurol. 2001 Mar; 168(1):96-104. PMID: 11170724.
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  259. Kaus MR, Warfield SK, Nabavi A, Black PM, Jolesz FA, Kikinis R. Automated segmentation of MR images of brain tumors. Radiology. 2001 Feb; 218(2):586-91. PMID: 11161183.
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  260. Murphy BP, Inder TE, Huppi PS, Warfield S, Zientara GP, Kikinis R, Jolesz FA, Volpe JJ. Impaired cerebral cortical gray matter growth after treatment with dexamethasone for neonatal chronic lung disease. Pediatrics. 2001 Feb; 107(2):217-21. PMID: 11158449.
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  261. Zahajszky J, Dickey CC, McCarley RW, Fischer IA, Nestor P, Kikinis R, Shenton ME. A quantitative MR measure of the fornix in schizophrenia. Schizophr Res. 2001 Jan 15; 47(1):87-97. PMID: 11163548; PMCID: PMC2845160.
  262. Sperling RA, Guttmann CR, Hohol MJ, Warfield SK, Jakab M, Parente M, Diamond EL, Daffner KR, Olek MJ, Orav EJ, Kikinis R, Jolesz FA, Weiner HL. Regional magnetic resonance imaging lesion burden and cognitive function in multiple sclerosis: a longitudinal study. Arch Neurol. 2001 Jan; 58(1):115-21. PMID: 11176944.
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  263. Haker S, Tannenbaum A, Kikinis R. Mass preserving mappings and image registration. Proceedings of Medical Image Computing and Computer-Assisted Intervention – MICCAI 2001, 4th International Conference. 2001; 120-127.
  264. O’Donnell L, Westin CF, Grimson WEL, Ruiz-Alzola J, Shenton ME, Kikinis R. Phase-based user-steered image segmentation. Proceedings of Medical Image Computing and Computer-Assisted Intervention – MICCAI 2001, 4th International Conference. 2001; 1022-1030.
  265. Jolesz FA, Nabavi A, Kikinis R. Integration of interventional MRI with computer-assisted surgery. J Magn Reson Imaging. 2001 Jan; 13(1):69-77. PMID: 11169806.
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  266. Warfield SK, Rexilius J, Huppi PS, Inder TE, Miller EG, Wells III WM, Zientara GP, Jolesz FA, Kikinis R. A binary entropy measure to assess nonrigid registration algorithms. Proceedings of Medical Image Computing and Computer-Assisted Intervention – MICCAI 2001, 4th International Conference. 2001; 266-274.
  267. Shahidi R, Clarke L, Bucholz RD, Fuchs H, Kikinis R, Robb RA, Vannier MW. White paper: challenges and opportunities in computer-assisted interventions January 2001. Comput Aided Surg. 2001; 6(3):176-81. PMID: 11747136.
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  268. Timoner SJ, Grimson WEL, Kikinis R, Wells III WM. Fast linear elastic matching without landmarks. Proceedings of Medical Image Computing and Computer-Assisted Intervention – MICCAI 2001, 4th International Conference. 2001; 1358-1360.
  269. Mamata Y, Mamata H, Nabavi A, Kacher DF, Pergolizzi RS, Schwartz RB, Kikinis R, Jolesz FA, Maier SE. Intraoperative diffusion imaging on a 0.5 Tesla interventional scanner. J Magn Reson Imaging. 2001 Jan; 13(1):115-9. PMID: 11169812.
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  270. Mocanu D, Kettenback J, Sweeney MO, KenKnight BH, Kikinis R, Eisenberg SR. Patient-specific simulation of internal defibrillation. Proceedings of Medical Image Computing and Computer-Assisted Intervention – MICCAI 2001, 4th International Conference. 2001; 983-990.
  271. Jaume S, Ferrant M, Schreyer, Hoyte L, Macq B, Kikinis R, Warfield SK. Multiresolution signal processing on meshes for automatic pathological shape characterization. Proceedings of Medical Image Computing and Computer-Assisted Intervention – MICCAI 2001, 4th International Conference. 2001; 1398-1400.
  272. Rexilius J, Warfield SK, Guttmann CRG, Wei X, Benson R, Wolfson L, Shenton M, Handels H, Kikinis R. A novel nonrigid registration algorithm and applications. Proceedings of Medical Image Computing and Computer-Assisted Intervention – MICCAI 2001, 4th International Conference. 2001; 923-931.
  273. Pachai C, Zhu YM, Guttmann CRG, Kikinis R, Jolesz FA, Gimenez G, Froment JC, Confavreux C, Warfield SK. Unsupervised and adaptive segmentation of multispectral 3D magnetic resonance images of human brain: a generic approach. Proceedings of Medical Image Computing and Computer-Assisted Intervention – MICCAI 2001, 4th International Conference. 2001; 1067-1074.
  274. Ferrant M, Cuisenaire O, Macq B, Thiran JP, Shenton ME, Kikinis R, Warfield SK. Surface based atlas matching of the brain using deformable surfaces and volumetric finite elements. Proceedings of Medical Image Computing and Computer-Assisted Intervention – MICCAI 2001, 4th International Conference. 2001; 1352-1353.
  275. Haber I, Kikinis R, Westin CF. Phase-driven finite element model for spatio-temporal tracking in tagged cardiac MRI. Proceedings of Medical Image Computing and Computer-Assisted Intervention – MICCAI 2001, 4th International Conference. 2001; 1332-1335.
  276. Bhalerao A, Pfister H, Halle M, Kikinis R. Fast re-rendering of volume and surface graphics by depth, color, and opacity buffering. Med Image Anal. 2000 Sep; 4(3):235-51. PMID: 11145311.
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  277. Khoury SJ, Guttmann CR, Orav EJ, Kikinis R, Jolesz FA, Weiner HL. Changes in activated T cells in the blood correlate with disease activity in multiple sclerosis. Arch Neurol. 2000 Aug; 57(8):1183-9. PMID: 10927799.
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  278. Okuda S, Kikinis R, Geva T, Chung T, Dumanil H, Powell AJ. 3D-shaded surface rendering of gadolinium-enhanced MR angiography in congenital heart disease. Pediatr Radiol. 2000 Aug; 30(8):540-5. PMID: 10993538.
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  279. Dumanli H, Fielding JR, Gering DT, Kikinis R. Volume assessment of the normal female cervix with MR imaging: comparison of the segmentation technique and two geometric formula. Acad Radiol. 2000 Jul; 7(7):502-5. PMID: 10902958.
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  280. Haker S, Angenent S, Tannenbaum A, Kikinis R. Nondistorting flattening maps and the 3-D visualization of colon CT images. IEEE Trans Med Imaging. 2000 Jul; 19(7):665-70. PMID: 11055781.
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  281. Hirayasu Y, McCarley RW, Salisbury DF, Tanaka S, Kwon JS, Frumin M, Snyderman D, Yurgelun-Todd D, Kikinis R, Jolesz FA, Shenton ME. Planum temporale and Heschl gyrus volume reduction in schizophrenia: a magnetic resonance imaging study of first-episode patients. Arch Gen Psychiatry. 2000 Jul; 57(7):692-9. PMID: 10891040; PMCID: PMC2850271.
  282. Hata N, Nabavi A, Wells WM, Warfield SK, Kikinis R, Black PM, Jolesz FA. Three-dimensional optical flow method for measurement of volumetric brain deformation from intraoperative MR images. J Comput Assist Tomogr. 2000 Jul-Aug; 24(4):531-8. PMID: 10966182.
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  283. Richolt JA, Everett P, Teschner M, Kikinis R, Millis MB. [Computer-assisted planning of corrective osteotomies in cases of epiphysiolysis capitis femoris]. Orthopade. 2000 Jul; 29(7):599-604. PMID: 10986704.
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  284. Westin CF, Richolt J, Moharir V, Kikinis R. Affine adaptive filtering of CT data. Med Image Anal. 2000 Jun; 4(2):161-77. PMID: 10972328.
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  285. Schreyer AG, Fielding JR, Warfield SK, Lee JH, Loughlin KR, Dumanli H, Jolesz FA, Kikinis R. Virtual CT cystoscopy: color mapping of bladder wall thickness. Invest Radiol. 2000 May; 35(5):331-4. PMID: 10803675.
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  286. Weiner HL, Guttmann CR, Khoury SJ, Orav EJ, Hohol MJ, Kikinis R, Jolesz FA. Serial magnetic resonance imaging in multiple sclerosis: correlation with attacks, disability, and disease stage. J Neuroimmunol. 2000 May 01; 104(2):164-73. PMID: 10713356.
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  287. Warfield SK, Mulkern RV, Winalski CS, Jolesz FA, Kikinis R. An image processing strategy for the quantification and visualization of exercise-induced muscle MRI signal enhancement. J Magn Reson Imaging. 2000 May; 11(5):525-31. PMID: 10813862.
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  288. Killiany RJ, Gomez-Isla T, Moss M, Kikinis R, Sandor T, Jolesz F, Tanzi R, Jones K, Hyman BT, Albert MS. Use of structural magnetic resonance imaging to predict who will get Alzheimer's disease. Ann Neurol. 2000 Apr; 47(4):430-9. PMID: 10762153.
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  289. Fielding JR, Dumanli H, Schreyer AG, Okuda S, Gering DT, Zou KH, Kikinis R, Jolesz FA. MR-based three-dimensional modeling of the normal pelvic floor in women: quantification of muscle mass. AJR Am J Roentgenol. 2000 Mar; 174(3):657-60. PMID: 10701604.
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  290. Warfield SK, Kaus M, Jolesz FA, Kikinis R. Adaptive, template moderated, spatially varying statistical classification. Med Image Anal. 2000 Mar; 4(1):43-55. PMID: 10972320.
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  291. Ruiz-Alzola J, Westin CF, Warfield SK, Nabavi A, Kikinis R. Nonrigid registration of 3D scalar, vector and tensor medical data. Proceedings of the Third International Conference on Medical Image Computing and Computer-Assisted Intervention. 2000; 541-550.
  292. Kettenbach J, Kacher DF, Koskinen SK, Silverman SG, Nabavi A, Gering D, Tempany CM, Schwartz RB, Kikinis R, Black PM, Jolesz FA. Interventional and intraoperative magnetic resonance imaging. Annu Rev Biomed Eng. 2000; 2:661-90. PMID: 11701527.
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  293. Dumanli H, Fielding J, Gering D, Kikinis R. Volume assessment of the normal female cervix with MR imaging: comparison of the segmentation techniique and two geometric formulas. 2000; 7:502-505.
  294. Haker S, Angenent S, Tannenbaum A, Kikinis R. Nondistorting flattening for virtual colonoscopy. Proceedings of the Third International Conference on Medical Image Computing and Computer-Assisted Intervention. 2000; 358-366.
  295. Butz T, Warfield SK, Tuncali K, Silverman SG, van Sonnenberg E, Jolesz F, Kikinis R. Pre- and intra-operative planning and simulation of percutaneous tumor ablation. Proceedings of the Third International Conference on Medical Image Computing and Computer-Assisted Intervention. 2000; 317-326.
  296. Westin CF, Lorigo LM, Faugeras O, Grimson WEL, Dawson S, Norbash A, Kikinis R. Segmentation by adaptive geodesic active contours. Proceedings of the Third International Conference on Medical Image Computing and Computer-Assisted Intervention. 2000; 266-275.
  297. Daffner KR, Mesulam MM, Holcomb PJ, Calvo V, Acar D, Chabrerie A, Kikinis R, Jolesz FA, Rentz DM, Scinto LF. Disruption of attention to novel events after frontal lobe injury in humans. J Neurol Neurosurg Psychiatry. 2000 Jan; 68(1):18-24. PMID: 10601395; PMCID: PMC1760636.
  298. Everett PC, Seldin EB, Troulis M, Kaban LB, Kikinis R. . A 3-D system for planning and simulating minimally-invasive distraction osteogenesis of the facial skeleton. Proceedings of the Third International Conference on Medical Image Computing and Computer-Assisted Intervention. 2000; 1029-1039.
  299. Schorr O, Hata N, Bzostek A, Kumar R, Burghart C, Taylor RH, Kikinis R. . Distributed modular computer-integrated surgical robotic systems: architecture for intelligent object distribution. Proceedings of the Third International Conference on Medical Image Computing and Computer-Assisted Intervention. 2000; 979-987.
  300. Kordelle J, Mamisch C, Kikinis R, Seibel R, Richolt JA. Anatomical analysis and preoperative planning of correctional osteotomies: slipped capital femoral epiphysis (SCFE). Minim Invasive Ther Allied Technol. 2000; 9(3-4):269-76. PMID: 20156024.
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  301. Kaus MR, Nabavi A, Mamisch CT, Wells WH, Jolesz FA, Kikinis R, Warfield SK. Simulation of corticospinal tract displacement in patients with brain tumors. Proceedings of the Third International Conference on Medical Image Computing and Computer-Assisted Intervention. 2000; 9-18.
  302. Ferrant M, Warfield SK, Nabavi A, Jolesz FA, Kikinis R. . Registration of 3D intraoperative MR images of the brain using a finite element biomechanical model. Proceedings of the Third International Conference on Medical Image Computing and Computer-Assisted Intervention. 2000; 19-28.
  303. Chinzei K, Hata N, Jolesz FA, Kikinis R. MR compatible surgical assist robot: system integration and preliminary feasibility study. Proceedings of the Third International Conference on Medical Image Computing and Computer-Assisted Intervention. 2000; 921-930.
  304. Nabavi A, Mamisch CT, Gering DT, Kacher DF, Pergolizzi RS, Wells WM, Kikinis R, Black PM, Jolesz FA. Image-guided therapy and intraoperative MRI in neurosurgery. Minim Invasive Ther Allied Technol. 2000; 9(3-4):277-86. PMID: 20156025.
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  305. Golland P, Grimson WEL, Shneton ME, Kikinis R. Small sample size learning for shape analysis of anatomical structures. Proceedings of the Third International Conference on Medical Image Computing and Computer-Assisted Intervention. 2000; 78-82.
  306. Bzostek A, Kumar R, Hata N, Schorr O, Kikinis R, Taylor RH. Distributed modular computer-integrated surgical robotic systems: implementation using modular software and networked systems. Proceedings of the Third International Conference on Medical Image Computing and Computer-Assisted Intervention. 2000; 969-978.
  307. Warfield SK, Nabavi A, Butz T, Tuncali K, Silverman SG, Black PM, Jolesz FA, Kikinis R. Intraoperative segmentation and nonrigid registration of image guided therapy. Proceedings of the Third International Conference on Medical Image Computing and Computer-Assisted Intervention. 2000; 176-185.
  308. Holinger DP, Shenton ME, Wible CG, Donnino R, Kikinis R, Jolesz FA, McCarley RW. Superior temporal gyrus volume abnormalities and thought disorder in left-handed schizophrenic men. Am J Psychiatry. 1999 Nov; 156(11):1730-5. PMID: 10553736; PMCID: PMC2845841.
  309. Inder TE, Huppi PS, Warfield S, Kikinis R, Zientara GP, Barnes PD, Jolesz F, Volpe JJ. Periventricular white matter injury in the premature infant is followed by reduced cerebral cortical gray matter volume at term. Ann Neurol. 1999 Nov; 46(5):755-60. PMID: 10553993.
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  310. Khoury SJ, Orav EJ, Guttmann CR, Kikinis R, Jolesz FA, Weiner HL. Changes in serum levels of ICAM and TNF-R correlate with disease activity in multiple sclerosis. Neurology. 1999 Sep 11; 53(4):758-64. PMID: 10489037.
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  311. Kettenbach J, Wong T, Kacher D, Hata N, Schwartz RB, Black PM, Kikinis R, Jolesz FA. Computer-based imaging and interventional MRI: applications for neurosurgery. Comput Med Imaging Graph. 1999 Sep-Oct; 23(5):245-58. PMID: 10638655.
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  312. Angenent S, Haker S, Tannenbaum A, Kikinis R. On the Laplace-Beltrami operator and brain surface flattening. IEEE Trans Med Imaging. 1999 Aug; 18(8):700-11. PMID: 10534052.
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  313. Hirayasu Y, Shenton ME, Salisbury DF, Kwon JS, Wible CG, Fischer IA, Yurgelun-Todd D, Zarate C, Kikinis R, Jolesz FA, McCarley RW. Subgenual cingulate cortex volume in first-episode psychosis. Am J Psychiatry. 1999 Jul; 156(7):1091-3. PMID: 10401458; PMCID: PMC2845843.
  314. Levitt JJ, McCarley RW, Nestor PG, Petrescu C, Donnino R, Hirayasu Y, Kikinis R, Jolesz FA, Shenton ME. Quantitative volumetric MRI study of the cerebellum and vermis in schizophrenia: clinical and cognitive correlates. Am J Psychiatry. 1999 Jul; 156(7):1105-7. PMID: 10401463; PMCID: PMC2845842.
  315. Gibson SFF, Grimson WEL, Kanade T, Kikinis R. United States Patent: Personal patient simulation. 1999.
  316. Berger JW, Leventon M, Kikinis R. United States Patent:Technique for creating an ophthalmic augmented reality environment. 1999.
  317. Grimson WE, Kikinis R, Jolesz FA, Black PM. Image-guided surgery. Sci Am. 1999 Jun; 280(6):62-9. PMID: 10349732.
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  318. Dickey CC, McCarley RW, Voglmaier MM, Niznikiewicz MA, Seidman LJ, Hirayasu Y, Fischer I, Teh EK, Van Rhoads R, Jakab M, Kikinis R, Jolesz FA, Shenton ME. Schizotypal personality disorder and MRI abnormalities of temporal lobe gray matter. Biol Psychiatry. 1999 Jun 01; 45(11):1393-402. PMID: 10356620; PMCID: PMC2832794.
  319. Schwartz RB, Hsu L, Wong TZ, Kacher DF, Zamani AA, Black PM, Alexander E, Stieg PE, Moriarty TM, Martin CA, Kikinis R, Jolesz FA. Intraoperative MR imaging guidance for intracranial neurosurgery: experience with the first 200 cases. Radiology. 1999 May; 211(2):477-88. PMID: 10228532.
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  320. Shimizu K, Panych LP, Mulkern RV, Yoo SS, Schwartz RB, Kikinis R, Jolesz FA. Partial wavelet encoding: a new approach for accelerating temporal resolution in contrast-enhanced MR imaging. J Magn Reson Imaging. 1999 May; 9(5):717-24. PMID: 10331769.
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  321. Guttmann CR, Kikinis R, Anderson MC, Jakab M, Warfield SK, Killiany RJ, Weiner HL, Jolesz FA. Quantitative follow-up of patients with multiple sclerosis using MRI: reproducibility. J Magn Reson Imaging. 1999 Apr; 9(4):509-18. PMID: 10232508.
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  322. Kikinis R, Guttmann CR, Metcalf D, Wells WM, Ettinger GJ, Weiner HL, Jolesz FA. Quantitative follow-up of patients with multiple sclerosis using MRI: technical aspects. J Magn Reson Imaging. 1999 Apr; 9(4):519-30. PMID: 10232509.
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  323. Fried MP, Moharir VM, Shinmoto H, Alyassin AM, Lorensen WE, Hsu L, Kikinis R. Virtual laryngoscopy. Ann Otol Rhinol Laryngol. 1999 Mar; 108(3):221-6. PMID: 10086612.
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  324. Kwon JS, McCarley RW, Hirayasu Y, Anderson JE, Fischer IA, Kikinis R, Jolesz FA, Shenton ME. Left planum temporale volume reduction in schizophrenia. Arch Gen Psychiatry. 1999 Feb; 56(2):142-8. PMID: 10025438.
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  325. Warfield S, Robatino A, Dengler J, Jolesz F, Kikinis R. Nonlinear Registration and Template-Driven Segmentation. Brain Warping. 1999; 67-84.
  326. Richolt JA, Teschner M, Everett PC, Millis MB, Kikinis R. Abstracts from the 4(th) symposium on computer assisted orthopaedic surgery (CAOS'99), held in davos, switzerland on march 18(th) and 19(th), 1999* Comput Aided Surg. 1999; 4(3):152-67. PMID: 10528272.
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  327. Richolt JA, Teschner M, Everett PC, Millis MB, Kikinis R. Impingement simulation of the hip in SCFE using 3D models. Comput Aided Surg. 1999; 4(3):144-51. PMID: 10528271.
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  328. Hata N, Nabavi A, Warfield S, Wells WM, Kikinis R, Jolesz FA. A volumetric optical flow method for measurement of brain deformation from intraoperative magnetic resonance images. Proceedings of the 2nd International Conference on Medical Image Computing and Computer-Assisted Intervention. 1999; 928-935.
  329. Golland P, Kikinis R, Halle M, Umans C, Grimson WE, Shenton ME, Richolt JA. AnatomyBrowser: A novel approach to visualization and integration of medical information. Comput Aided Surg. 1999; 4(3):129-43. PMID: 10528270.
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  330. Richolt JA, Teschner M, Everett PC, Millis MB, Kikinis R. First announcement and call for papers, 5th international symposium on CAOS, computer assisted orthopaedics surgery, february 17-19, 2000, davos, switzerland Comput Aided Surg. 1999; 4(3):168. PMID: 10528273.
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  331. Shenton ME, Frumin M, McCarley RW, Maier S, Westin CF, Fischer IA, Dickey C, Kikinis R. Morphometric MR Findings in Schizophrenia. Psychiatric Neuroimaging Strategies: Research and Clinical Applications. 1999.
  332. Fielding JR, Schreyer AG, Tempany CM, D’Amico AV, Zou KH, Kumar S, Juliano K, Kikinis R. MRI based volume measurements of the periurethral zone of the prostate: correlation with bladder wall thickness and obstructive symptoms. Proceedings of ISMRM. 1999.
  333. Nakajima S, Atsumi H, Metcalf DC, Yoshimine T, Jolesz FA, Black PM, Kikinis R. A simple method of scalp localization using multiplanar reconstruction of MR images. Surg Neurol. 1998 Dec; 50(6):597-9. PMID: 9870823.
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  334. Ozlen F, Nakajima S, Chabrerie A, Leventon ME, Grimson E, Kikinis R, Jolesz F, Black PM. Excision of cortical dysplasia in the language area with use of a surgical navigator: a case report. Epilepsia. 1998 Dec; 39(12):1361-6. PMID: 9860075.
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  335. Moharir VM, Fried MP, Vernick DM, Janecka IP, Zahajsky J, Hsu L, Lorensen WE, Anderson M, Wells WM, Morrison P, Kikinis R. Computer-assisted three-dimensional reconstruction of head and neck tumors. Laryngoscope. 1998 Nov; 108(11 Pt 1):1592-8. PMID: 9818811.
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  336. Sato Y, Shiraga N, Nakajima S, Tamura S, Kikinis R. Local maximum intensity projection (LMIP): a new rendering method for vascular visualization. J Comput Assist Tomogr. 1998 Nov-Dec; 22(6):912-7. PMID: 9843232.
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  337. Zientara GP, Saiviroonporn P, Morrison PR, Fried MP, Hushek SG, Kikinis R, Jolesz FA. MRI monitoring of laser ablation using optical flow. J Magn Reson Imaging. 1998 Nov-Dec; 8(6):1306-18. PMID: 9848743.
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  338. Kettenbach J, Silverman SG, Hata N, Kuroda K, Saiviroonporn P, Zientara GP, Morrison PR, Hushek SG, Black PM, Kikinis R, Jolesz FA. Monitoring and visualization techniques for MR-guided laser ablations in an open MR system. J Magn Reson Imaging. 1998 Jul-Aug; 8(4):933-43. PMID: 9702896.
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  339. Tsao J, Chiodo CP, Williamson DS, Wilson MG, Kikinis R. Computer-assisted quantification of periaxial bone rotation from X-ray CT. J Comput Assist Tomogr. 1998 Jul-Aug; 22(4):615-20. PMID: 9676455.
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  340. Hata N, Morrison PR, Kettenbach J, Black PM, Kikinis R, Jolesz FA. Computer-assisted intra-operative magnetic resonance imaging monitoring of interstitial laser therapy in the brain: a case report. J Biomed Opt. 1998 Jul; 3(3):304-11. PMID: 23015084.
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  341. Potts GF, Gugino LD, Leventon ME, Grimson WE, Kikinis R, Cote W, Alexander E, Anderson JE, Ettinger GJ, Aglio LS, Shenton ME. Visual hemifield mapping using transcranial magnetic stimulation coregistered with cortical surfaces derived from magnetic resonance images. J Clin Neurophysiol. 1998 Jul; 15(4):344-50. PMID: 9736468.
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  342. Sato Y, Nakajima S, Shiraga N, Atsumi H, Yoshida S, Koller T, Gerig G, Kikinis R. Three-dimensional multi-scale line filter for segmentation and visualization of curvilinear structures in medical images. Med Image Anal. 1998 Jun; 2(2):143-68. PMID: 10646760.
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  343. Gibson S, Fyock C, Grimson E, Kanade T, Kikinis R, Lauer H, McKenzie N, Mor A, Nakajima S, Ohkami H, Osborne R, Samosky J, Sawada A. Volumetric object modeling for surgical simulation. Med Image Anal. 1998 Jun; 2(2):121-32. PMID: 10646758.
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  344. Ettinger GJ, Leventon ME, Grimson WE, Kikinis R, Gugino L, Cote W, Sprung L, Aglio L, Shenton ME, Potts G, Hernandez VL, Alexander E. Experimentation with a transcranial magnetic stimulation system for functional brain mapping. Med Image Anal. 1998 Jun; 2(2):133-42. PMID: 10646759.
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  345. Portas CM, Goldstein JM, Shenton ME, Hokama HH, Wible CG, Fischer I, Kikinis R, Donnino R, Jolesz FA, McCarley RW. Volumetric evaluation of the thalamus in schizophrenic male patients using magnetic resonance imaging. Biol Psychiatry. 1998 May 01; 43(9):649-59. PMID: 9582998.
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  346. Nafts CA, Kelleher TP, Lorensen WE, Cline HE, Altobelli DE, Kikinis R, Darrow RD, Cumoulin CL. . United States Patent: Computer graphic and live video system enhancing vizualisation of body structures during surgery. 1998.
  347. Chabrerie A, Ozlen F, Nakajima S, Leventon ME, Atsumi H, Grimson E, Jolesz F, Kikinis R, Black PM. Three-dimensional image reconstruction for low-grade glioma surgery. Neurosurg Focus. 1998 Apr 15; 4(4):e7. PMID: 17168507.
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  348. Frankenthaler RP, Moharir V, Kikinis R, van Kipshagen P, Jolesz F, Umans C, Fried MP. Virtual otoscopy. Otolaryngol Clin North Am. 1998 Apr; 31(2):383-92. PMID: 9518445.
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  349. Guttmann CR, Jolesz FA, Kikinis R, Killiany RJ, Moss MB, Sandor T, Albert MS. White matter changes with normal aging. Neurology. 1998 Apr; 50(4):972-8. PMID: 9566381.
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  350. Kwon JS, Shenton ME, Hirayasu Y, Salisbury DF, Fischer IA, Dickey CC, Yurgelun-Todd D, Tohen M, Kikinis R, Jolesz FA, McCarley RW. MRI study of cavum septi pellucidi in schizophrenia, affective disorder, and schizotypal personality disorder. Am J Psychiatry. 1998 Apr; 155(4):509-15. PMID: 9545997; PMCID: PMC2826366.
  351. Hüppi PS, Warfield S, Kikinis R, Barnes PD, Zientara GP, Jolesz FA, Tsuji MK, Volpe JJ. Quantitative magnetic resonance imaging of brain development in premature and mature newborns. Ann Neurol. 1998 Feb; 43(2):224-35. PMID: 9485064.
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  352. Young GS, Silverman SG, Kettenbach J, Hata N, Golland P, Jolesz FA, Loughlin KR, Kikinis R. Three-dimensional computed tomography for planning urologic surgery. Urol Clin North Am. 1998 Feb; 25(1):103-11. PMID: 9529541.
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  353. Peled S, Gudbjartsson H, Westin CF, Kikinis R, Jolesz FA. Magnetic resonance imaging shows orientation and asymmetry of white matter fiber tracts. Brain Res. 1998 Jan 05; 780(1):27-33. PMID: 9473573.
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  354. Lorigo L, Faugeras O, Grimson WEL, Keriven R, Kikinis R. Segmentation of bone in clinical knee MRI using texture-based geodesic active contours. Proceedings of Medical Image Computing and Computer-Assisted Intervention. 1998; 1195-1204.
  355. Young GS, Silverman SG, Kettenbach J, Hata N, Golland P, Jolesz FA, Loughlin KR, Kikinis R. Three Dimensional Computed Tomography for Planning Urologic Surgery. Urologic Clinics of North America. 1998; 25(1):103-111.
  356. Kapur T, Grimson WEL, Kikinis R, Wells WM. Enhanced spatial priors for segmentation of magnetic resonance imagery. Proceedings of Medical Image Computing and Computer-Assisted Intervention. 1998; 457-468.
  357. Saiviroonporn P, Robatino A, Zahajszky J, Kikinis R, Jolesz FA. Real-time interactive three-dimensional segmentation. Acad Radiol. 1998 Jan; 5(1):49-56. PMID: 9442207.
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  358. Shimizu K, Mulkern RV, Oshio K, Panych LP, Yoo SS, Kikinis R, Jolesz FA. Rapid tip tracking with MRI by a limited projection reconstruction technique. J Magn Reson Imaging. 1998 Jan-Feb; 8(1):262-4. PMID: 9500292.
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  359. Keeve E, Girod S, Kikinis R, Girod B. Deformable modeling of facial tissue for craniofacial surgery simulation. Comput Aided Surg. 1998; 3(5):228-38. PMID: 10207647.
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  360. Nakagohri T, Jolesz FA, Okuda S, Asano T, Kenmochi T, Kainuma O, Tokoro Y, Aoyama H, Lorensen WE, Kikinis R. Virtual pancreatoscopy of mucin-producing pancreatic tumors. Comput Aided Surg. 1998; 3(5):264-8. PMID: 10207651.
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  361. Hata N, Dohi T, Warfield S, Wells W, Kikinis R, Jolesz FA. Multimodality deformable registratipn of pre and intraoperative images for MRI-guided brain surgery. Proceedings of Medical Image Computing and Computer-Assisted Intervention. 1998; 1067-1074.
  362. Chabrerie A, Ozlen F, Nakajima S, Leventon ME, Atsumi H, Grimson E, Keeve E, Helmers S, Riviello J, Holmes G, Duffy F, Jolesz F, Kikinis R, Black PM. Three-dimensional reconstruction and surgical navigation in pediatric epilepsy surgery. Pediatr Neurosurg. 1997 Dec; 27(6):304-10. PMID: 9655145.
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  363. Held K, Rota Kops E, Krause BJ, Wells WM, Kikinis R, Müller-Gärtner HW. Markov random field segmentation of brain MR images. IEEE Trans Med Imaging. 1997 Dec; 16(6):878-86. PMID: 9533587.
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  364. Wible CG, Shenton ME, Fischer IA, Allard JE, Kikinis R, Jolesz FA, Iosifescu DV, McCarley RW. Parcellation of the human prefrontal cortex using MRI. Psychiatry Res. 1997 Nov 28; 76(1):29-40. PMID: 9498307.
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  365. Jolesz FA, Lorensen WE, Shinmoto H, Atsumi H, Nakajima S, Kavanaugh P, Saiviroonporn P, Seltzer SE, Silverman SG, Phillips M, Kikinis R. Interactive virtual endoscopy. AJR Am J Roentgenol. 1997 Nov; 169(5):1229-35. PMID: 9353433.
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  366. Black PM, Moriarty T, Alexander E, Stieg P, Woodard EJ, Gleason PL, Martin CH, Kikinis R, Schwartz RB, Jolesz FA. Development and implementation of intraoperative magnetic resonance imaging and its neurosurgical applications. Neurosurgery. 1997 Oct; 41(4):831-42; discussion 842-5. PMID: 9316044.
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  367. Kettenbach J, Silverman SG, Schwartz RB, Hsu L, Koskinen SK, Kikinis R, Black PM, Jolesz FA. [Design, clinical suitability and future aspects of a 0.5 T MRI special system for interventional use]. Radiologe. 1997 Oct; 37(10):825-34. PMID: 9454276.
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  368. Nakajima S, Atsumi H, Bhalerao AH, Jolesz FA, Kikinis R, Yoshimine T, Moriarty TM, Stieg PE. Computer-assisted surgical planning for cerebrovascular neurosurgery. Neurosurgery. 1997 Aug; 41(2):403-9; discussion 409-10. PMID: 9257308.
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  369. Hohol MJ, Guttmann CR, Orav J, Mackin GA, Kikinis R, Khoury SJ, Jolesz FA, Weiner HL. Serial neuropsychological assessment and magnetic resonance imaging analysis in multiple sclerosis. Arch Neurol. 1997 Aug; 54(8):1018-25. PMID: 9267977.
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  370. Iosifescu DV, Shenton ME, Warfield SK, Kikinis R, Dengler J, Jolesz FA, McCarley RW. An automated registration algorithm for measuring MRI subcortical brain structures. Neuroimage. 1997 Jul; 6(1):13-25. PMID: 9245652.
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  371. Nakajima S, Atsumi H, Kikinis R, Moriarty TM, Metcalf DC, Jolesz FA, Black PM. Use of cortical surface vessel registration for image-guided neurosurgery. Neurosurgery. 1997 Jun; 40(6):1201-8; discussion 1208-10. PMID: 9179893.
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  372. Silverman SG, Jolesz FA, Newman RW, Morrison PR, Kanan AR, Kikinis R, Schwartz RB, Hsu L, Koran SJ, Topulos GP. Design and implementation of an interventional MR imaging suite. AJR Am J Roentgenol. 1997 Jun; 168(6):1465-71. PMID: 9168709.
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  373. Yoo SS, Guttmann CR, Ives JR, Panych LP, Kikinis R, Schomer DL, Jolesz FA. 3D localization of surface 10-20 EEG electrodes on high resolution anatomical MR images. Electroencephalogr Clin Neurophysiol. 1997 Apr; 102(4):335-9. PMID: 9146495.
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  374. Lorensen, WE, Jolesz FA, Kikinis R. United States Patent: Virtual internal cavity inspection system. 1997.
  375. Ettinger GJ, Leventon ME, Grimson WEL, Kikinis R, Gugino V, Cote W, Sprung L, Aglio L, Shenton M, Potts G, Alexander E. Experimentation with a transcranial magnetic stimulation system for functional brain mapping. Proceedings of the First Joint Conference Computer Vision, Virtual Reality and Robotics in Medicine / Medical Robotics and Computer-Assisted Surgery. 1997; 477-486.
  376. Kettenbach J, Silverman SG, Schwartz RB, HsuL, Koskinen SK, Kikinis R, Black PMcL, Jolesz FA. Aufbau, klinische Eignung und Zukunftsaspekte eines 0.5-T-MR-Spezialsystems fur den interventionellen Einsatz. 1997; 37:825-834.
  377. Berger JW, Leventon ME, Hata N, Wells W, Kikinis R. Design considerations for a computer vision-enabled opthalmic augmented reality environment. Proceedings of the First Joint Conference Computer Vision, Virtual Reality and Robotics in Medicine / Medical Robotics and Computer-Assisted Surgery. 1997; 397-408.
  378. Berger JW, Leventon ME, Hata N, Wells W, Kikinis R. Design considerations for a computer vision-enabled opthalmic augmented reality environment. Proceedings of the First Joint Conference: Computer Vision, Virtual Reality and Robotics in Medicine / Medical Robotics and Computer-Assisted Surgery. 1997; 397-408.
  379. Kettenbach J, Jolesz FA, Kikinis R. Surgical Planning Laboratory: a new challenge for radiology?. Proceedings of the 11th International Symposium and Exhibition: Computer Assisted Radiology and Surgery (CAR’97). 1997.
  380. Gibson S, Samosky J, Mor A, Fyock C, Grimson E, Kanade T, Kikinis R, Lauer H, McKenzie N, Nakajima S, Ohkami H, Osborne R, Sawada A. Simulating arthroscopic knee surgery using volumetric object representations, real-time volume rendering and haptic feedback. Proceedings of the First Joint Conference Computer Vision, Virtual Reality and Robotics in Medicine / Medical Robotics and Computer-Assisted Surgery. 1997; 369-378.
  381. Bhalerao A, Westin CF, Kikinis R. Unwrapping phase in 3D MR phase contrast angiograms. Proceedings of the First Joint Conference Computer Vision, Virtual Reality and Robotics in Medicine / Medical Robotics and Computer-Assisted Surgery. 1997; 194-202.
  382. Gibson S, Samosky J, Mor A, Fyock C, Grimson E, Kanade T, Kikinis R, Lauer H, McKenzie N, Nakajima S, Ohkami H, Osborne R, Sawada A. Simulating arthroscopic knee surgery using volumetric object representations, real-time volume rendering and haptic feedback. Proceedings of the First Joint Conference: Computer Vision, Virtual Reality and Robotics in Medicine / Medical Robotics and Computer Assisted Surgery. 1997; 369-378.
  383. Nakajima S, Kikinis R, Black PM, Atsumi H, Leventon ME, Hata N, Metcalf DC, Moriarty TM, Alexander E, Jolesz FA. Image-Guided Neurosurgery at Brigham and Women’s Hospital. Computer Assisted Neurosurgery, eds. Tamaki N, Ehara K. 1997; 144-162.
  384. Sato Y, Nakajima S, Atsumi H, Koller T, Gerig G, Yoshida S, Kikinis R. 3D multi-scale line filter for segmentation and visualization of curvilinear structures in medical images. Proceedings of the First Joint Conference Computer Vision, Virtual Reality and Robotics in Medicine / Medical Robotics and Computer-Assisted Surgery. 1997; 211-222.
  385. Westin CF, Bhaleroa A, Knutsson H, Kikinis R. . Using local 3D structure for segmentation of bone from computer tomography images. Proceedings of the IEEE Computer Society Conference on Computer Vision and Pattern Recognition. 1997; 794-800.
  386. Alexander E, Moriarty TM, Kikinis R, Black P, Jolesz FM. The present and future role of intraoperative MRI in neurosurgical procedures. Stereotact Funct Neurosurg. 1997; 68(1-4 Pt 1):10-7. PMID: 9711689.
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  387. Gurvits TV, Shenton ME, Hokama H, Ohta H, Lasko NB, Gilbertson MW, Orr SP, Kikinis R, Jolesz FA, McCarley RW, Pitman RK. Magnetic resonance imaging study of hippocampal volume in chronic, combat-related posttraumatic stress disorder. Biol Psychiatry. 1996 Dec 01; 40(11):1091-9. PMID: 8931911; PMCID: PMC2910907.
  388. Wells WM, Kikinis R. United States Patent: Correction of Magnetic Resonance imager intensity inhomogeneities using tissue properties. 1996.
  389. Reimold SC, Maier SE, Aggarwal K, Fleischmann KE, Piwnica-Worms D, Kikinis R, Lee RT. Aortic flow velocity patterns in chronic aortic regurgitation: implications for Doppler echocardiography. J Am Soc Echocardiogr. 1996 Sep-Oct; 9(5):675-83. PMID: 8887871.
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  390. Grimson EL, White SJ, Ettinger GJ, Wells WM, Lozano-Perez T, Kikinis R. . United States Patent: System and method of registration of three- dimensional data sets including anatomical body data. 1996.
  391. Matsumae M, Kikinis R, Mórocz IA, Lorenzo AV, Sándor T, Albert MS, Black PM, Jolesz FA. Age-related changes in intracranial compartment volumes in normal adults assessed by magnetic resonance imaging. J Neurosurg. 1996 Jun; 84(6):982-91. PMID: 8847593.
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  392. Kapur T, Grimson WE, Wells WM, Kikinis R. Segmentation of brain tissue from magnetic resonance images. Med Image Anal. 1996 Jun; 1(2):109-27. PMID: 9873924.
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  393. Matsumae M, Kikinis R, Mórocz I, Lorenzo AV, Albert MS, Black PM, Jolesz FA. Intracranial compartment volumes in patients with enlarged ventricles assessed by magnetic resonance-based image processing. J Neurosurg. 1996 Jun; 84(6):972-81. PMID: 8847592.
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  394. Kikinis R, Gleason PL, Moriarty TM, Moore MR, Alexander E, Stieg PE, Matsumae M, Lorensen WE, Cline HE, Black PM, Jolesz FA. Computer-assisted interactive three-dimensional planning for neurosurgical procedures. Neurosurgery. 1996 Apr; 38(4):640-9; discussion 649-51. PMID: 8692380.
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  395. Moriarty TM, Kikinis R, Jolesz FA, Black PM, Alexander E. Magnetic resonance imaging therapy. Intraoperative MR imaging. Neurosurg Clin N Am. 1996 Apr; 7(2):323-31. PMID: 8726445.
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  396. Wells WM, Viola P, Atsumi H, Nakajima S, Kikinis R. Multi-modal volume registration by maximization of mutual information. Med Image Anal. 1996 Mar; 1(1):35-51. PMID: 9873920.
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  397. Kikinis R, Umans CM, Halle M. The Surgical Planning Laboratory Browers: An Interactive Neuroanatomy Teaching Tool. 1996; 201:563.
  398. Fried MP, Hsu L, Kikinis R, Kleefield J, Shinmoto H, Atsumi H, Nakajima S, Nixon A, Jalahej H, Gopal H, Frankenthaler R, Morrison PR, Jolesz FA. Image guidance for surgery: CT and MRI guidance. Proceedings of the 4th International Conference on Head and Neck Cancer. 1996.
  399. Alexander E, Moriarty TM, Kikinis R, Jolesz FA. Innovations in Minimalism: Intraoperative MRI. 1996; 338-352.
  400. Alexander E, Moriarty TM, Kikinis R, Jolesz FA. Innovations in minimalism: intraoperative MRI. Clin Neurosurg. 1996; 43:338-52. PMID: 9247815.
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  401. Kikinis R, Umans C, Lorensen W, Jolesz FA. Virtual Otoscopy. Proceedings of the 34th Annual Meeting of the American Society of Neuroradiology. 1996; 194-195.
  402. Grimson WL, Ettinger GJ, White SJ, Lozano-Perez T, Wells WM, Kikinis R. An automatic registration method for frameless stereotaxy, image guided surgery, and enhanced reality visualization. IEEE Trans Med Imaging. 1996; 15(2):129-40. PMID: 18215896.
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  403. Hohne, K. H., and Ron Kikinis (Eds.). . Visualization in Biomedical Computing: 4th International Conference, VBC '96, Hamburg, Germany, September 22-25, 1996: Proceedings (Lecture Notes In). 1996.
  404. Moriarty TM, Kikinis R, Jolesz FA, Black PMcL, Alexander E. Magnetic Resonance Imaging Therapy. Neurosurgery Clinics of North America. 1996; 7(2):323-331.
  405. Wells WM, Grimson WL, Kikinis R, Jolesz FA. Adaptive segmentation of MRI data. IEEE Trans Med Imaging. 1996; 15(4):429-42. PMID: 18215925.
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  406. Hata N, Wells WM, Halle M, Nakajima S, Viola P, Kikinis R, Jolesz FA. Image guided microscopic surgery system using mutual-informatoin based registration. Proceedings of Visualization in Biomedical Computing, 4th International Conference. 1996; 317-326.
  407. Hokama H, Shenton ME, Nestor PG, Kikinis R, Levitt JJ, Metcalf D, Wible CG, O'Donnell BF, Jolesz FA, McCarley RW. Caudate, putamen, and globus pallidus volume in schizophrenia: a quantitative MRI study. Psychiatry Res. 1995 Nov 10; 61(4):209-29. PMID: 8748466.
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  408. Seltzer SE, Judy PF, Adams DF, Jacobson FL, Stark P, Kikinis R, Swensson RG, Hooton S, Head B, Feldman U. Spiral CT of the chest: comparison of cine and film-based viewing. Radiology. 1995 Oct; 197(1):73-8. PMID: 7568857.
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  409. Jolesz FA, Kikinis R. Intraoperative imaging revolutionizes therapy. Diagn Imaging (San Franc). 1995 Sep; 17(9):62-8. PMID: 10155622.
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  410. Grimson WEL, White SJ, Ettinger GJ, Wells III WM, Lozano-Perez T, Kikinis R. . United States Patent: System and method of registration of three-dimensional data sets. 1995.
  411. Guttmann CR, Ahn SS, Hsu L, Kikinis R, Jolesz FA. The evolution of multiple sclerosis lesions on serial MR. AJNR Am J Neuroradiol. 1995 Aug; 16(7):1481-91. PMID: 7484637.
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  412. O'Donnell BF, Faux SF, McCarley RW, Kimble MO, Salisbury DF, Nestor PG, Kikinis R, Jolesz FA, Shenton ME. Increased rate of P300 latency prolongation with age in schizophrenia. Electrophysiological evidence for a neurodegenerative process. Arch Gen Psychiatry. 1995 Jul; 52(7):544-9. PMID: 7598630.
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  413. Schenck JF, Jolesz FA, Roemer PB, Cline HE, Lorensen WE, Kikinis R, Silverman SG, Hardy CJ, Barber WD, Laskaris ET, et al. Superconducting open-configuration MR imaging system for image-guided therapy. Radiology. 1995 Jun; 195(3):805-14. PMID: 7754014.
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  414. Wible CG, Shenton ME, Hokama H, Kikinis R, Jolesz FA, Metcalf D, McCarley RW. Prefrontal cortex and schizophrenia. A quantitative magnetic resonance imaging study. Arch Gen Psychiatry. 1995 Apr; 52(4):279-88. PMID: 7702444.
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  415. O'Donnell BF, Shenton ME, McCarley RW, Faux SF, Kikinis R, Nestor PG, Jolesz FA. Conjoint left asymmetry of auditory P300 voltage and MRI volume of posterior superior temporal gyrus in schizophrenia: a quantitative evaluation. Electroencephalogr Clin Neurophysiol Suppl. 1995; 44:387-94. PMID: 7649048.
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  416. Grimson WEL, Ettinger GJ, White SJ, Gleason PL, Lozano-Perez T, Wells WM, Kikinis R. Evaluating and validating an automated registration system for enhanced reality visualizatoin in surgery. Proceedings of Computer Vision, Virtual Reality and Robotics in Medicine. 1995; 3-12.
  417. Warfield S, Dengler J, Zaers J, Guttmann CR, Wells WM, Ettinger GJ, Hiller J, Kikinis R. Automatic identification of gray matter structures from MRI to improve the segmentation of white matter lesions. J Image Guid Surg. 1995; 1(6):326-38. PMID: 9080353.
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  418. Wells WM, Viola P, Kikinis R. Multi-modal volume registration by maximization of mutual information. Proceedings of Medical Robotics and Computer Assisted Surgery (MR CAS). 1995; 55-62.
  419. Warfield S, Dengler J, Zaers J, Guttmann CRG, Wells WM, Ettinger GJ, Hiller J, Kikinis R. Automatic identification of grey matter structures from MRI to improve the segmentation of white matter lesions. Proceedings of Medical Robotics and Computer Assisted Surgery (MR CAS). 1995; 140-147.
  420. Wells WM, Grimson WEL, Kikinis R, Jolesz FA. Adaptive segmentation of MRI data. Proceedings of Computer Vision, Virtual Reality and Robotics in Medicine. 1995; 59-69.
  421. Geiger B, Kikinis R. Simulation of endoscopy. Proceedings of Computer Vision, Virtual Reality and Robotics in Medicine. 1995; 277-281.
  422. Kapur T, Grimson WEL, Kikinis R. Segmentation of brain tissue from MR images. Proceedings of Computer Vision, Virtual Reality and Robotics in Medicine. 1995; 429-433.
  423. Lorensen WE, Jolesz FA, Kikinis R. The exploration of cross-sectional data with a virtual endoscope. Proceedings of Medicine Meets Virtual Reality III. 1995.
  424. Kikinis R, Shenton ME, Gerig G, Hokama H, Haimson J, O'Donnell BF, Wible CG, McCarley RW, Jolesz FA. Temporal lobe sulco-gyral pattern anomalies in schizophrenia: an in vivo MR three-dimensional surface rendering study. Neurosci Lett. 1994 Nov 21; 182(1):7-12. PMID: 7891892.
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  425. Vaina LM, Grzywacz NM, Kikinis R. Segregation of computations underlying perception of motion discontinuity and coherence. Neuroreport. 1994 Nov 21; 5(17):2289-94. PMID: 7881048.
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  426. Khoury SJ, Guttmann CR, Orav EJ, Hohol MJ, Ahn SS, Hsu L, Kikinis R, Mackin GA, Jolesz FA, Weiner HL. Longitudinal MRI in multiple sclerosis: correlation between disability and lesion burden. Neurology. 1994 Nov; 44(11):2120-4. PMID: 7969970.
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  427. Reimold SC, Maier SE, Fleischmann KE, Khatri M, Piwnica-Worms D, Kikinis R, Lee RT. Dynamic nature of the aortic regurgitant orifice area during diastole in patients with chronic aortic regurgitation. Circulation. 1994 May; 89(5):2085-92. PMID: 8181132.
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  428. Kikinis R, Jolesz FA, Cline HE, Matsumae M, Moore MR, Lorensen WE, Stieg PE,Black PM. . Use of three-dimensional reconstructed magnetic resonance imaging data for neurosurgical planning. Stevens J, ed. Three-Dimensional Confocal Microscopy: Volume Investigation of Biological Specimens. 1994; 469-491.
  429. Gleason PL, Kikinis R, Altobelli D, Wells W, Alexander E, Black PM, Jolesz F. Video registration virtual reality for nonlinkage stereotactic surgery. Stereotact Funct Neurosurg. 1994; 63(1-4):139-43. PMID: 7624624.
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  430. Jolesz FA, Lorensen WE, Kikinis R, Saiviroonporn P, Phillips MD, Silverman SG. Virtual endoscopy: three-dimensional rendering of cross-sectional images for endoluminal visualization. 1994; 193:469.
  431. Grimson WEL, Lozano-Perez T, Wells WM, Ettinger GJ, White SJ, Kikinis R. An automatic registration method for frameless sterotaxy, image guided surgery, and enhanced reality visuzliation. Proceedings of IEEE Computer Society Conference on Computer Vision and Pattern Recognition. 1994; 430-436.
  432. Kikinis R, Dengler J, Metcalf D, Hokama H, Shenton ME, Jolesz FA. 3D warping of digital anatomical atlas onto patient's data sets. 1994.
  433. Szekely G, Kikinis R, Koller T, Gerig G. Structural description and combined 3-D display for superior analysis of cerebral vascularity from MRA. Proceedings of the Third Conference on Visualization in Biomedical Computing. 1994; 2359:272-281.
  434. Jolesz FA, Kikinis R, Shtern F. . The vision of image-guided computerized surgery: the high tech operating room. Taylor R, Lavalle S, Burdea G, Mosges R., eds. Computer Assisted Surgery. 1994.
  435. Chernoff DM, Silverman SG, Kikinis R, Adams DF, Seltzer SE, Richie JP, Loughlin KR. Three-dimensional imaging and display of renal tumors using spiral CT: a potential aid to partial nephrectomy. Urology. 1994 Jan; 43(1):125-9. PMID: 8284875.
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  436. Cline HE, Maier SE, Lorensen WE, Kikinis R. Cardiac analysis using gradient segmentation. 1994.
  437. Wells W, Kikinis R, Grimson W, Jolesz F. Statistical intensity correction and segmentation of magnetic resonance image data. Proceedings of the Third Conference on Visualization in Biomedical Computing. 1994; 2359:13-24.
  438. Kikinis R, Gleason PL, Lorensen W, Wells W, Grimson WE, Lozano-Perez T, Ettinger G, White S, Jolesz FA. Image guidance techniques for neurosurgery. Proceedings of the Third Conference on Visualization in Biomedical Computing. 1994; 2359:537-540.
  439. Seltzer SE, Judy PF, Adams DF, Jacobson F, Stark P, Kikinis R, Hooton S. Cine display of spiral chest CT scans. 1994; 193:339.
  440. Ettinger G, Grimson E, Lozano-Perez T, Wells W, White S, Kikinis R. Automatic registration for multiple sclerosis change detection. Proceedings of the IEEE Workshop on Biomedical Image Analysis. 1994; 297-306.
  441. Reimold SC, Maier SE, Fleischmann KE, Khatri M, Piwnica-Worms DR, Kikinis R, Lee RT. The aortic regurgitant orifice area decreases during diastole. 1994.
  442. Nestor PG, Shenton ME, McCarley RW, Haimson J, Smith RS, O'Donnell B, Kimble M, Kikinis R, Jolesz FA. Neuropsychological correlates of MRI temporal lobe abnormalities in schizophrenia. Am J Psychiatry. 1993 Dec; 150(12):1849-55. PMID: 8238641.
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  443. Altobelli DE, Kikinis R, Mulliken JB, Cline H, Lorensen W, Jolesz F. Computer-assisted three-dimensional planning in craniofacial surgery. Plast Reconstr Surg. 1993 Sep; 92(4):576-85; discussion 586-7. PMID: 8356120.
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  444. O'Donnell BF, Shenton ME, McCarley RW, Faux SF, Smith RS, Salisbury DF, Nestor PG, Pollak SD, Kikinis R, Jolesz FA. The auditory N2 component in schizophrenia: relationship to MRI temporal lobe gray matter and to other ERP abnormalities. Biol Psychiatry. 1993 Jul 1-15; 34(1-2):26-40. PMID: 8373937.
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  445. Shenton ME, O'Donnell BF, Nestor PG, Wible CG, Kikinis R, Faux SF, Pollak SD, Jolesz FA, McCarley RW. Temporal lobe abnormalities in a patient with schizophrenia who has word-finding difficulty: use of high-resolution magnetic resonance imaging and auditory P300 event-related potentials. Harv Rev Psychiatry. 1993 Jul-Aug; 1(2):110-7. PMID: 9384837.
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  446. McCarley RW, Shenton ME, O'Donnell BF, Faux SF, Kikinis R, Nestor PG, Jolesz FA. Auditory P300 abnormalities and left posterior superior temporal gyrus volume reduction in schizophrenia. Arch Gen Psychiatry. 1993 Mar; 50(3):190-7. PMID: 8439239.
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  447. Gleason PL, Black PMcL, Kikinis R, Wells W, Altobelli D, Lorensen W, Cline H, Jolesz FA. A new virtual reality technique for tumor localization. 1993.
  448. Vaina LM, Gryzwacz N, Kikinis R. Hierarchical organization of computations involved in the extraction of motion discontinuity and coherence: evidence from patients with unilateral occipital-parietal lesion. ARVO. 1993.
  449. Wells W, Kikinis R, Altobelli D, Lorensen W, Ettinger G, Cline H, Gleason PL, Jolesz FA. . Video registration using fiducials for surgical enhanced reality. IEEE-EMBS Conference. 1993.
  450. Jolesz FA, Kikinis R, Cline HE, Lorensen WE. . The use of computerized imaging and image processing for neurosurgical planning. Black PMcL, Lampson LA, eds. Astrocytomas. 1993; 50-56.
  451. Vosburgh KG, Lorensen WE, Cline HE, Nafis CA, Kikinis R, Altobelli D, Gleason L, Jolesz FA. Improved visualization during neurosurgery through reality enhancement. Society for Minimally Invasive Therapy International Meeting. 1993.
  452. Schwartz RB, Jones KM, Chernoff DM, Mukherji SK, Khorasani R, Tice HM, Kikinis R, Hooton SM, Stieg PE, Polak JF. Common carotid artery bifurcation: evaluation with spiral CT. Work in progress. Radiology. 1992 Nov; 185(2):513-9. PMID: 1410365.
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  453. Kikinis R, Shenton ME, Gerig G, Martin J, Anderson M, Metcalf D, Guttmann CR, McCarley RW, Lorensen W, Cline H, et al. Routine quantitative analysis of brain and cerebrospinal fluid spaces with MR imaging. J Magn Reson Imaging. 1992 Nov-Dec; 2(6):619-29. PMID: 1446105.
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  454. Shenton ME, Kikinis R, Jolesz FA, Pollak SD, LeMay M, Wible CG, Hokama H, Martin J, Metcalf D, Coleman M, et al. Abnormalities of the left temporal lobe and thought disorder in schizophrenia. A quantitative magnetic resonance imaging study. N Engl J Med. 1992 Aug 27; 327(9):604-12. PMID: 1640954.
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  455. Sandor T, Jolesz F, Tieman J, Kikinis R, Jones K, Albert M. Comparative analysis of computed tomographic and magnetic resonance imaging scans in Alzheimer patients and controls. Arch Neurol. 1992 Apr; 49(4):381-4. PMID: 1558519.
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  456. Jolesz FA, Kikinis R. The role of imaging in the operating room of the future. Administrative Radiology. 1992; 43-46.
  457. Gerig G, Martin J, Kikinis R, Kuebler O, Shenton ME, Jolesz FA. Unsupervised segmentation of 3-D dual-echo MR head data. Butterworth, Special Edition of Image and Vision Computing. 1992; 349-360.
  458. Moore MR, Kikinis R, Jolesz FA, Matsumae M, Stieg PE, Black PMcL. Interactive 3-D reconstruction of intracranial tumors and AVMs from MRI for surgical planning. 1992.
  459. Stieg PE, Moore MR, Kikinis R, Jolesz FA, Altobelli DE, Mulliken JB. Treatment planning for cranial base procedures using interactive 3-D reconstructions. North American Skull Base Society. 1992.
  460. Gerig G, Kubler O, Kikinis R, Jolesz FA. Nonlinear anisotropic filtering of MRI data. IEEE Trans Med Imaging. 1992; 11(2):221-32. PMID: 18218376.
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  461. Kikinis R, Altobelli D, Jolesz FA. The use of computerized image processing for the planning and simulation of craniofacial surgery. Zinreich SJ, ed. Problems in Radiology. 1992; 1(2):210-226.
  462. Metcalf D, Kikinis R, Guttmann C, Vaina L, Jolesz F. . 4D connected component labeling applied to quantitative analysis of MS lesion temporal development. Proceedings of the IEEE-EMBS Conference. 1992.
  463. Kikinis R, Cline H, Altobelli D, Halle M, Lorensen W, Jolesz F. Interactive visualization and manipulation of 3D reconstructions for the planning of surgical procedures. Proceedings of SPIE Visualization in Biomedical Computing. 1992; 559-563.
  464. Silverman SG, Kikinis R, Chernoff DM, Adams DF, Seltzer SE, Loughlin KR. Three-dimensional imaging of the kidneys using spiral CT: a potential surgical planning tool. 1992; 185:136.
  465. Gerig G, Kikinis R, Kuoni W, von Schulthess GK, Kübler O. Semiautomated ROI analysis in dynamic MR studies. Part I: Image analysis tools for automatic correction of organ displacements. J Comput Assist Tomogr. 1991 Sep-Oct; 15(5):725-32. PMID: 1885789.
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  466. Shenton ME, Kikinis R, McCarley RW, Metcalf D, Tieman J, Jolesz FA. Application of automated MRI volumetric measurement techniques to the ventricular system in schizophrenics and normal controls. Schizophr Res. 1991 Sep; 5(2):103-13. PMID: 1931803.
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  467. Cline HE, Lorensen WE, Souza SP, Jolesz FA, Kikinis R, Gerig G, Kennedy TE. 3D surface rendered MR images of the brain and its vasculature. J Comput Assist Tomogr. 1991 Mar-Apr; 15(2):344-51. PMID: 2002124.
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  468. Gerig G, Martin J, Kikinis R, Kuebler O. Segmentation of dual-echo MR head data. Proceedings of the International Symposium CAR'91. 1991; 606-611.
  469. Gerig G, Martin J, Kikinis R, Kubler O, Shenton ME, Jolesz FA. Automated segmentation of dual-echo MR head data. IPMI'91. 1991.
  470. Kikinis R, Jolesz FA, Lorensen WE, Cline HE, Stieg PE, Black PMcL. 3-D reconstruction of skull base tumors from MRI data for neurosurgical planning. Society of Magnetic Resonance in Medicine. 1991; 752.
  471. Gerig G, Martin J, Kikinis R, Kuebler O, Shenton ME, Jolesz FA. Automated segmentation of dual-echo MR head data. Colchester ACF, and Hawkes DJ (eds.) December 1996 Lecture Notes in Computer Science Series. 1991; 175-185.
  472. Kikinis R, Jolesz FA, Cline HE, Lorensen WE, Gerig G. The potential use of MRI guidance for computerized surgical procedures. IEEE/EMBS Conference. 1991.
  473. Cline HE, Lorensen WE, Kikinis R, Jolesz F. Three-dimensional segmentation of MR images of the head using probability and connectivity. J Comput Assist Tomogr. 1990 Nov-Dec; 14(6):1037-45. PMID: 2229557.
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  474. Martin E, Boesch C, Zuerrer M, Kikinis R, Molinari L, Kaelin P, Boltshauser E, Duc G. MR imaging of brain maturation in normal and developmentally handicapped children. J Comput Assist Tomogr. 1990 Sep-Oct; 14(5):685-92. PMID: 1697866.
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  475. Kikinis R, Winalski C, Weissman B, Cline H, Gerig G, Anderson M, Martin J, Jolesz FA. Computerized image processing for display and quantification in arthritic knees. 76th Scientific Assembly of The Radiological Society of North America, November 25-30, 1990. Chicago, IL, USA. 1990; 177(Radiology):222.
  476. Kikinis R, Jolesz FA, Lin E, Shenton ME, LeMay M, Metcalf DC, Sandor T, Colucci VM, Tieman J, Black PM. . Differential diagnosis of normal pressure hydrocephalus from Alzheimer's disease and brain atrophy using computer-aided analysis of magnetic resonance images. Talk presented in the Scientific Program at the 28th Annual Meeting of the American Society of Neuroradiology, Los Angeles, CA, March 18-25, 1990. 1990.
  477. Gerig G, Kikinis R, Jolesz FA. Image processing of routine spin-echo MR images to enhance vascular structures: comparison with MR angiography. Proceedings of the NATO Advanced Workshop. 1990; F60:121-132.
  478. Kikinis R, Mulkern RV, Lorenzo A, Madrid Y, Colucci V, Hushek S, Jolesz FA. . Dynamics of the distribution of gadolinium-DTPA following intra-ventricular application as studied with 3d volume RARE imaging in rabbit brain. Ninth Annual Meeting of the Society of Magnetic Resonance in Medicine SMRM, New York, USA, August 18-24, 1990. 1990; 9:753.
  479. 17. Bleier AR, Hushek SG, Higuchi N, Kikinis R, Panych LP, Weisskoff RM, Dalcanton J, Cohen MS, McKinstry RC, Rosen BR, Jolesz FA. . MR image acquisition and processing for real-time monitoring of laser surgery. Ninth Annual Meeting of the Society of Magnetic Resonance in Medicine SMRM, New York, USA, August 18-24, 1990; Book of Abstracts 1990. 1990; 9:373.
  480. Jolesz FA, Kikinis R, Cline HE, Lorensen WE, Gerig G. 3-D view of the brain using MRI: computerized image processing. Hospimedica. 1990; 8(6):20-26.
  481. Jolesz FA, Kikinis R, Cline HE, Lorensen WE, Gerig G. 3-D view of the brain using MRI: computerized image processing. Hospimedica. 1990; 8(1):20-26.
  482. Kikinis R, Jolesz FA, Gerig G, Sandor T, Cline HE, Lorensen WE, Halle M, Benton SA. 3D morphometric and morphologic information derived from clinical brain MR images. Proceedings of the NATO Advanced Workshop. 1990; F60:441-454.
  483. Gerig G, Kikinis R. Segmentation of 3D magnetic resonance data. Proceedings of the 5th International Conference on Image Analysis and Processing. 1990; 602-609.
  484. Kikinis R, Wolfensberger M, Boesch C, Martin E. Larynx: MR imaging at 2.35 T. Radiology. 1989 Apr; 171(1):165-9. PMID: 2928521.
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  485. Boesch C, Issakainen J, Kewitz G, Kikinis R, Martin E, Boltshauser E. Magnetic resonance imaging of the brain in congenital cytomegalovirus infection. Pediatr Radiol. 1989; 19(2):91-3. PMID: 2537944.
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  486. Kikinis R, Mulkern RV, Maynard A, Jakab P, Kinney H, Schoene W, Jolesz FA. MRI of postmortem specimen: effects of marker substances. Eighth Annual Meeting of the Society of Magnetic Resonance in Medicine SMRM, Amsterdam, August 1989. 1989; (Book of Abstracts):734.
  487. Martin E, Kikinis R, Zuerrer M, Boesch C, Briner J, Kewitz G, Kaelin P. Developmental stages of human brain: an MR study. J Comput Assist Tomogr. 1988 Nov-Dec; 12(6):917-22. PMID: 3183125.
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  488. Martin E, Boesch C, Grütter R, Kikinis R, Kewitz G, Boltshauser E, Werner B, Eich G. [Magnetic resonance in pediatric research and clinical practice. II. Studies on the development and pathology of the brain in neonates, infants and young children]. Helv Paediatr Acta. 1988 Aug; 43(1-2):75-86. PMID: 3170248.
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  489. Kikinis R, von Schulthess GK, Jäger P, Dürr R, Bino M, Kuoni W, Kübler O. Normal and hydronephrotic kidney: evaluation of renal function with contrast-enhanced MR imaging. Radiology. 1987 Dec; 165(3):837-42. PMID: 3685363.
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  490. Wolfensberger M, Jecklin A, Franze I, Kikinis R. [Computed tomography for the preoperative classification of oral cavity and oropharyngeal carcinomas]. Laryngol Rhinol Otol (Stuttg). 1987 Jun; 66(6):324-8. PMID: 3626715.
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  491. Wolfensberger M, Kikinis R, Schmid S, Wichmann W. [Computerized tomography in the classification of hypopharyngeal and laryngeal cancers]. Laryngol Rhinol Otol (Stuttg). 1987 Feb; 66(2):84-7. PMID: 3573895.
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  492. Ylae-Jaeaeski J, Kuebler O, Kikinis R. Real-time interactive three-dimensional display of CT and MR imaging volume data. 73rd Scientific Assembly and Annual Meeting of the RSNA1989 Nov 29-Dec 4. 1987; 165:421.
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