Harvard Catalyst Profiles

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Shilpa Nadimpalli Kobren, Ph.D.


Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
  1. Kobren SN, Baldridge D, Velinder M, Krier JB, LeBlanc K, Esteves C, Pusey BN, Züchner S, Blue E, Lee H, Huang A, Bastarache L, Bican A, Cogan J, Marwaha S, Alkelai A, Murdock DR, Liu P, Wegner DJ, Paul AJ, Sunyaev SR, Kohane IS. Commonalities across computational workflows for uncovering explanatory variants in undiagnosed cases. Genet Med. 2021 06; 23(6):1075-1085. PMID: 33580225; PMCID: PMC8187147.
    Citations: 4     Fields:    Translation:Humans
  2. Beaulieu-Jones B, Darabos C, Kim D, Verma A, Kobren SN. Innovative methodological approaches for data integration to derive patterns across diverse, large-scale biomedical datasets. Pac Symp Biocomput. 2021; 26:256-260. PMID: 33691022.
    Citations:    Fields:    
  3. Kobren SN, Chazelle B, Singh M. PertInInt: An Integrative, Analytical Approach to Rapidly Uncover Cancer Driver Genes with Perturbed Interactions and Functionalities. Cell Syst. 2020 07 22; 11(1):63-74.e7. PMID: 32711844.
    Citations: 4     Fields:    Translation:Humans
  4. Kobren SN, Beaulieu-Jones B, Darabos C, Kim D, Verma A. Ongoing challenges and innovative approaches for recognizing patterns across large-scale, integrative biomedical datasets. Pac Symp Biocomput. 2020; 25:286-294. PMID: 31797604.
  5. Kobren SN, Singh M. Systematic domain-based aggregation of protein structures highlights DNA-, RNA- and other ligand-binding positions. Nucleic Acids Res. 2019 01 25; 47(2):582-593. PMID: 30535108; PMCID: PMC6344845.
    Citations: 10     Fields:    Translation:HumansCells
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Funded by the NIH National Center for Advancing Translational Sciences through its Clinical and Translational Science Awards Program, grant number UL1TR002541.