Harvard Catalyst Profiles

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Dana Silverbush, Ph.D.


Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
  1. Chaligne R, Gaiti F, Silverbush D, Schiffman JS, Weisman HR, Kluegel L, Gritsch S, Deochand SD, Gonzalez Castro LN, Richman AR, Klughammer J, Biancalani T, Muus C, Sheridan C, Alonso A, Izzo F, Park J, Rozenblatt-Rosen O, Regev A, Suvà ML, Landau DA. Epigenetic encoding, heritability and plasticity of glioma transcriptional cell states. Nat Genet. 2021 Oct; 53(10):1469-1479. PMID: 34594037.
    Citations:    Fields:    
  2. Shani O, Raz Y, Monteran L, Scharff Y, Levi-Galibov O, Megides O, Shacham H, Cohen N, Silverbush D, Avivi C, Sharan R, Madi A, Scherz-Shouval R, Barshack I, Tsarfaty I, Erez N. Evolution of fibroblasts in the lung metastatic microenvironment is driven by stage-specific transcriptional plasticity. Elife. 2021 06 25; 10. PMID: 34169837.
    Citations: 2     Fields:    Translation:AnimalsCells
  3. Ciccolella S, Ricketts C, Soto Gomez M, Patterson M, Silverbush D, Bonizzoni P, Hajirasouliha I, Della Vedova G. Inferring cancer progression from Single-Cell Sequencing while allowing mutation losses. Bioinformatics. 2021 04 20; 37(3):326-333. PMID: 32805010.
    Citations: 4     Fields:    Translation:Humans
  4. Venkatesh HS, Morishita W, Geraghty AC, Silverbush D, Gillespie SM, Arzt M, Tam LT, Espenel C, Ponnuswami A, Ni L, Woo PJ, Taylor KR, Agarwal A, Regev A, Brang D, Vogel H, Hervey-Jumper S, Bergles DE, Suvà ML, Malenka RC, Monje M. Electrical and synaptic integration of glioma into neural circuits. Nature. 2019 09; 573(7775):539-545. PMID: 31534222.
    Citations: 136     Fields:    Translation:HumansAnimalsCells
  5. Neftel C, Laffy J, Filbin MG, Hara T, Shore ME, Rahme GJ, Richman AR, Silverbush D, Shaw ML, Hebert CM, Dewitt J, Gritsch S, Perez EM, Gonzalez Castro LN, Lan X, Druck N, Rodman C, Dionne D, Kaplan A, Bertalan MS, Small J, Pelton K, Becker S, Bonal D, Nguyen QD, Servis RL, Fung JM, Mylvaganam R, Mayr L, Gojo J, Haberler C, Geyeregger R, Czech T, Slavc I, Nahed BV, Curry WT, Carter BS, Wakimoto H, Brastianos PK, Batchelor TT, Stemmer-Rachamimov A, Martinez-Lage M, Frosch MP, Stamenkovic I, Riggi N, Rheinbay E, Monje M, Rozenblatt-Rosen O, Cahill DP, Patel AP, Hunter T, Verma IM, Ligon KL, Louis DN, Regev A, Bernstein BE, Tirosh I, Suvà ML. An Integrative Model of Cellular States, Plasticity, and Genetics for Glioblastoma. Cell. 2019 08 08; 178(4):835-849.e21. PMID: 31327527.
    Citations: 260     Fields:    Translation:HumansAnimalsCells
  6. Silverbush D, Sharan R. A systematic approach to orient the human protein-protein interaction network. Nat Commun. 2019 07 09; 10(1):3015. PMID: 31289271.
    Citations: 6     Fields:    Translation:Humans
  7. Silverbush D, Cristea S, Yanovich-Arad G, Geiger T, Beerenwinkel N, Sharan R. Simultaneous Integration of Multi-omics Data Improves the Identification of Cancer Driver Modules. Cell Syst. 2019 05 22; 8(5):456-466.e5. PMID: 31103572.
    Citations: 7     Fields:    Translation:HumansCells
  8. Cho H, Berger B, Peng J, Galitzine C, Vitek O, Beltran PMJ, Cristea IM, Görtler F, Solbrig S, Wettig T, Oefner PJ, Spang R, Altenbuchinger M, Basso RS, Hochbaum D, Vandin F, Silverbush D, Cristea S, Yanovich G, Geiger T, Beerenwinkel N, Sharan R, Zhou Z, Luhmann N, Alikhan NF, Achtman M. Principles of Systems Biology, No. 31. Cell Syst. 2018 08 22; 7(2):133-135. PMID: 30138580.
    Citations:    Fields:    
  9. Almozlino Y, Atias N, Silverbush D, Sharan R. ANAT 2.0: reconstructing functional protein subnetworks. BMC Bioinformatics. 2017 Nov 16; 18(1):495. PMID: 29145805.
    Citations: 5     Fields:    Translation:HumansAnimals
  10. Silverbush D, Grosskurth S, Wang D, Powell F, Gottgens B, Dry J, Fisher J. Cell-Specific Computational Modeling of the PIM Pathway in Acute Myeloid Leukemia. Cancer Res. 2017 02 15; 77(4):827-838. PMID: 27965317.
    Citations: 14     Fields:    Translation:HumansCells
  11. Shnaps O, Perry E, Silverbush D, Sharan R. INFERENCE OF PERSONALIZED DRUG TARGETS VIA NETWORK PROPAGATION. Pac Symp Biocomput. 2016; 21:156-67. PMID: 26776182.
    Citations: 6     Fields:    Translation:Humans
  12. Silverbush D, Sharan R. Network orientation via shortest paths. Bioinformatics. 2014 May 15; 30(10):1449-55. PMID: 24470573.
    Citations: 10     Fields:    Translation:AnimalsCells
  13. Silverbush D, Elberfeld M, Sharan R. Optimally orienting physical networks. J Comput Biol. 2011 Nov; 18(11):1437-48. PMID: 21999286.
    Citations: 5     Fields:    Translation:AnimalsCells
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Funded by the NIH National Center for Advancing Translational Sciences through its Clinical and Translational Science Awards Program, grant number UL1TR002541.