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Haoqi Sun, Ph.D.

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The research activities and funding listed below are automatically derived from NIH ExPORTER and other sources, which might result in incorrect or missing items. Faculty can login to make corrections and additions.
  1. Developmental Award (HAOQI SUN) Aug 1, 2019 - Jul 31, 2020
    Harvard University Center for AIDS Research (HU CFAR) NIH/NIAID 5P30AI060354-16
    Electroencephalogram-Based Brain Age in People Living with HIV
    Role: PI

Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
  1. Ye EM, Sun H, Krishnamurthy PV, Adra N, Ganglberger W, Thomas RJ, Lam AD, Westover MB. Dementia Detection from Brain Activity During Sleep. Sleep. 2022 Nov 30. PMID: 36448766.
    Citations:    Fields:    
  2. Jones DK, Eckhardt CA, Sun H, Tesh RA, Malik P, Quadri S, Firme MS, van Sleuwen M, Jain A, Fan Z, Jing J, Ge W, Nascimento FA, Sheikh IS, Jacobson C, Frigault M, Kimchi EY, Cash SS, Lee JW, Dietrich J, Westover MB. EEG-based grading of immune effector cell-associated neurotoxicity syndrome. Sci Rep. 2022 11 21; 12(1):20011. PMID: 36414694; PMCID: PMC9681864.
    Citations:    Fields:    Translation:Humans
  3. Bucklin AA, Ganglberger W, Quadri SA, Tesh RA, Adra N, Da Silva Cardoso M, Leone MJ, Krishnamurthy PV, Hemmige A, Rajan S, Panneerselvam E, Paixao L, Higgins J, Ayub MA, Shao YP, Ye EM, Coughlin B, Sun H, Cash SS, Thompson BT, Akeju O, Kuller D, Thomas RJ, Westover MB. High prevalence of sleep-disordered breathing in the intensive care unit - a cross-sectional study. Sleep Breath. 2022 Aug 16. PMID: 35971023.
    Citations:    Fields:    
  4. Ge W, Alabsi H, Jain A, Ye E, Sun H, Fernandes M, Magdamo C, Tesh RA, Collens SI, Newhouse A, Mvr Moura L, Zafar S, Hsu J, Akeju O, Robbins GK, Mukerji SS, Das S, Westover MB. Identifying Patients With Delirium Based on Unstructured Clinical Notes: Observational Study. JMIR Form Res. 2022 Jun 24; 6(6):e33834. PMID: 35749214; PMCID: PMC9270709.
  5. Liang Y, Lee DYW, Zhen S, Sun H, Zhu B, Liu J, Lei D, Lin CJ, Zhang S, Jacques NA, Quinti L, Ran C, Wang C, Griciuc A, Choi SH, Dai RH, Efferth T, Tanzi RE, Zhang C. Natural medicine HLXL targets multiple pathways of amyloid-mediated neuroinflammation and immune response in treating alzheimer's disease. Phytomedicine. 2022 Sep; 104:154158. PMID: 35728383.
    Citations:    Fields:    
  6. Adra N, Sun H, Ganglberger W, Ye EM, Dümmer LW, Tesh RA, Westmeijer M, Cardoso MDS, Kitchener E, Ouyang A, Salinas J, Rosand J, Cash SS, Thomas RJ, Westover MB. Optimal spindle detection parameters for predicting cognitive performance. Sleep. 2022 04 11; 45(4). PMID: 34984446; PMCID: PMC8996023.
    Citations:    Fields:    Translation:Humans
  7. Singh NM, Harrod JB, Subramanian S, Robinson M, Chang K, Cetin-Karayumak S, Dalca AV, Eickhoff S, Fox M, Franke L, Golland P, Haehn D, Iglesias JE, O'Donnell LJ, Ou Y, Rathi Y, Siddiqi SH, Sun H, Westover MB, Whitfield-Gabrieli S, Gollub RL. How Machine Learning is Powering Neuroimaging to Improve Brain Health. Neuroinformatics. 2022 10; 20(4):943-964. PMID: 35347570; PMCID: PMC9515245.
    Citations:    Fields:    
  8. Tesh RA, Sun H, Jing J, Westmeijer M, Neelagiri A, Rajan S, Krishnamurthy PV, Sikka P, Quadri SA, Leone MJ, Paixao L, Panneerselvam E, Eckhardt C, Struck AF, Kaplan PW, Akeju O, Jones D, Kimchi EY, Westover MB. VE-CAM-S: Visual EEG-Based Grading of Delirium Severity and Associations With Clinical Outcomes. Crit Care Explor. 2022 Jan; 4(1):e0611. PMID: 35072078; PMCID: PMC8769081.
  9. van Sleuwen M, Sun H, Eckhardt C, Neelagiri A, Tesh RA, Westmeijer M, Paixao L, Rajan S, Velpula Krishnamurthy P, Sikka P, Leone MJ, Panneerselvam E, Quadri SA, Akeju O, Kimchi EY, Westover MB. Physiological Assessment of Delirium Severity: The Electroencephalographic Confusion Assessment Method Severity Score (E-CAM-S). Crit Care Med. 2022 01 01; 50(1):e11-e19. PMID: 34582420; PMCID: PMC8678335.
    Citations: 1     Fields:    Translation:Humans
  10. Paixao L, Sun H, Hogan J, Hartnack K, Westmeijer M, Neelagiri A, Zhou DW, McClain LM, Kimchi EY, Purdon PL, Akeju O, Westover MB. ICU delirium burden predicts functional neurologic outcomes. PLoS One. 2021; 16(12):e0259840. PMID: 34855749; PMCID: PMC8638853.
    Citations:    Fields:    Translation:Humans
  11. Magdamo CG, Hong ZM, Noori A, Sheu YH, Deodhar M, Ye EM, Ge W, Sun H, Brenner L, Robbins GK, Mukerji S, Zafar SF, Benson N, Moura LMV, Hsu J, Arnold SE, Hyman BT, Serrano-Pozo A, Westover MB, Blacker D, Das S. Active deep learning to detect cognitive concerns in electronic health records. Alzheimers Dement. 2021 Dec; 17 Suppl 11:e055362. PMID: 34971026.
    Citations:    Fields:    
  12. Amerineni R, Sun H, Lee H, Hsu J, Patorno E, Westover MB, Zafar SF. Using electronic health data to explore effectiveness of ICU EEG and anti-seizure treatment. Ann Clin Transl Neurol. 2021 12; 8(12):2270-2279. PMID: 34802196; PMCID: PMC8670316.
    Citations:    Fields:    Translation:Humans
  13. Ong CS, Reinertsen E, Sun H, Moonsamy P, Mohan N, Funamoto M, Kaneko T, Shekar PS, Schena S, Lawton JS, D'Alessandro DA, Westover MB, Aguirre AD, Sundt TM. Prediction of operative mortality for patients undergoing cardiac surgical procedures without established risk scores. J Thorac Cardiovasc Surg. 2021 Sep 14. PMID: 34607725; PMCID: PMC8918430.
    Citations: 1     Fields:    
  14. Ligtenstein S, Song J, Jin J, Sun H, Paixao L, Zafar S, Westover MB. Do Triphasic Waves and Nonconvulsive Status Epilepticus Arise From Similar Mechanisms? A Computational Model. J Clin Neurophysiol. 2021 Sep 01; 38(5):366-375. PMID: 34155185; PMCID: PMC8429048.
    Citations: 1     Fields:    Translation:Humans
  15. Ganglberger W, Bucklin AA, Tesh RA, Da Silva Cardoso M, Sun H, Leone MJ, Paixao L, Panneerselvam E, Ye EM, Thompson BT, Akeju O, Kuller D, Thomas RJ, Westover MB. Sleep apnea and respiratory anomaly detection from a wearable band and oxygen saturation. Sleep Breath. 2022 09; 26(3):1033-1044. PMID: 34409545; PMCID: PMC8854446.
    Citations:    Fields:    
  16. Leone MJ, Sun H, Boutros CL, Liu L, Ye E, Sullivan L, Thomas RJ, Robbins GK, Mukerji SS, Westover MB. HIV increases sleep-based brain age despite antiretroviral therapy. Sleep. 2021 08 13; 44(8). PMID: 33783511; PMCID: PMC8361332.
    Citations: 2     Fields:    Translation:Humans
  17. Zafar SF, Rosenthal ES, Jing J, Ge W, Tabaeizadeh M, Aboul Nour H, Shoukat M, Sun H, Javed F, Kassa S, Edhi M, Bordbar E, Gallagher J, Moura V, Ghanta M, Shao YP, An S, Sun J, Cole AJ, Westover MB. Automated Annotation of Epileptiform Burden and Its Association with Outcomes. Ann Neurol. 2021 08; 90(2):300-311. PMID: 34231244; PMCID: PMC8516549.
    Citations: 1     Fields:    Translation:Humans
  18. Mukerji SS, Das S, Alabsi H, Brenner LN, Jain A, Magdamo C, Collens SI, Ye E, Keller K, Boutros CL, Leone MJ, Newhouse A, Foy B, Li MD, Lang M, Anahtar MN, Shao YP, Ge W, Sun H, Triant VA, Kalpathy-Cramer J, Higgins J, Rosand J, Robbins GK, Westover MB. Prolonged Intubation in Patients With Prior Cerebrovascular Disease and COVID-19. Front Neurol. 2021; 12:642912. PMID: 33897598.
    Citations: 3     
  19. Ozdemir RA, Tadayon E, Boucher P, Sun H, Momi D, Ganglberger W, Westover MB, Pascual-Leone A, Santarnecchi E, Shafi MM. Cortical responses to noninvasive perturbations enable individual brain fingerprinting. Brain Stimul. 2021 Mar-Apr; 14(2):391-403. PMID: 33588105.
    Citations: 3     Fields:    Translation:Humans
  20. Fernandes M, Sun H, Jain A, Alabsi HS, Brenner LN, Ye E, Ge W, Collens SI, Leone MJ, Das S, Robbins GK, Mukerji SS, Westover MB. Classification of the Disposition of Patients Hospitalized with COVID-19: Reading Discharge Summaries Using Natural Language Processing. JMIR Med Inform. 2021 Feb 10; 9(2):e25457. PMID: 33449908.
    Citations: 2     
  21. Sun H, Jain A, Leone MJ, Alabsi HS, Brenner LN, Ye E, Ge W, Shao YP, Boutros CL, Wang R, Tesh RA, Magdamo C, Collens SI, Ganglberger W, Bassett IV, Meigs JB, Kalpathy-Cramer J, Li MD, Chu JT, Dougan ML, Stratton LW, Rosand J, Fischl B, Das S, Mukerji SS, Robbins GK, Westover MB. CoVA: An Acuity Score for Outpatient Screening that Predicts Coronavirus Disease 2019 Prognosis. J Infect Dis. 2021 01 04; 223(1):38-46. PMID: 33098643; PMCID: PMC7665643.
    Citations: 19     Fields:    Translation:Humans
  22. Abou Jaoude M, Sun H, Pellerin KR, Pavlova M, Sarkis RA, Cash SS, Westover MB, Lam AD. Expert-level automated sleep staging of long-term scalp electroencephalography recordings using deep learning. Sleep. 2020 11 12; 43(11). PMID: 32478820.
    Citations: 7     Fields:    Translation:Humans
  23. Hogan J, Sun H, Paixao L, Westmeijer M, Sikka P, Jin J, Tesh R, Cardoso M, Cash SS, Akeju O, Thomas R, Westover MB. Night-to-night variability of sleep electroencephalography-based brain age measurements. Clin Neurophysiol. 2021 01; 132(1):1-12. PMID: 33248430.
    Citations: 1     Fields:    Translation:Humans
  24. Hogan J, Sun H, Aboul Nour H, Jing J, Tabaeizadeh M, Shoukat M, Javed F, Kassa S, Edhi MM, Bordbar E, Gallagher J, Junior VM, Ghanta M, Shao YP, Akeju O, Cole AJ, Rosenthal ES, Zafar S, Westover MB. Burst Suppression: Causes and Effects on Mortality in Critical Illness. Neurocrit Care. 2020 10; 33(2):565-574. PMID: 32096120; PMCID: PMC7483190.
    Citations: 3     Fields:    Translation:Humans
  25. Ye E, Sun H, Leone MJ, Paixao L, Thomas RJ, Lam AD, Westover MB. Association of Sleep Electroencephalography-Based Brain Age Index With Dementia. JAMA Netw Open. 2020 09 01; 3(9):e2017357. PMID: 32986106.
    Citations: 3     Fields:    Translation:Humans
  26. Kashkooli K, Polk SL, Hahm EY, Murphy J, Ethridge BR, Gitlin J, Ibala R, Mekonnen J, Pedemonte JC, Sun H, Westover MB, Barbieri R, Akeju O, Chamadia S. Improved tracking of sevoflurane anesthetic states with drug-specific machine learning models. J Neural Eng. 2020 08 04; 17(4):046020. PMID: 32485685; PMCID: PMC7540939.
    Citations: 1     Fields:    
  27. Sun H, Ganglberger W, Panneerselvam E, Leone MJ, Quadri SA, Goparaju B, Tesh RA, Akeju O, Thomas RJ, Westover MB. Sleep staging from electrocardiography and respiration with deep learning. Sleep. 2020 07 13; 43(7). PMID: 31863111.
    Citations: 16     Fields:    
  28. Goldenholz DM, Goldenholz SR, Romero J, Moss R, Sun H, Westover B. Development and Validation of Forecasting Next Reported Seizure Using e-Diaries. Ann Neurol. 2020 09; 88(3):588-595. PMID: 32567720.
    Citations: 10     Fields:    Translation:Humans
  29. Tabaeizadeh M, Aboul Nour H, Shoukat M, Sun H, Jin J, Javed F, Kassa S, Edhi M, Bordbar E, Gallagher J, Moura VJ, Ghanta M, Shao YP, Cole AJ, Rosenthal ES, Westover MB, Zafar SF. Burden of Epileptiform Activity Predicts Discharge Neurologic Outcomes in Severe Acute Ischemic Stroke. Neurocrit Care. 2020 06; 32(3):697-706. PMID: 32246435; PMCID: PMC7416505.
    Citations: 10     Fields:    Translation:Humans
  30. Liang Y, Raven F, Ward JF, Zhen S, Zhang S, Sun H, Miller SJ, Choi SH, Tanzi RE, Zhang C. Upregulation of Alzheimer's Disease Amyloid-ß Protein Precursor in Astrocytes Both in vitro and in vivo. J Alzheimers Dis. 2020; 76(3):1071-1082. PMID: 32597805.
    Citations: 5     Fields:    Translation:AnimalsCells
  31. Jing J, Herlopian A, Karakis I, Ng M, Halford JJ, Lam A, Maus D, Chan F, Dolatshahi M, Muniz CF, Chu C, Sacca V, Pathmanathan J, Ge W, Sun H, Dauwels J, Cole AJ, Hoch DB, Cash SS, Westover MB. Interrater Reliability of Experts in Identifying Interictal Epileptiform Discharges in Electroencephalograms. JAMA Neurol. 2020 01 01; 77(1):49-57. PMID: 31633742; PMCID: PMC6806666.
    Citations: 13     Fields:    Translation:Humans
  32. Jing J, Sun H, Kim JA, Herlopian A, Karakis I, Ng M, Halford JJ, Maus D, Chan F, Dolatshahi M, Muniz C, Chu C, Sacca V, Pathmanathan J, Ge W, Dauwels J, Lam A, Cole AJ, Cash SS, Westover MB. Development of Expert-Level Automated Detection of Epileptiform Discharges During Electroencephalogram Interpretation. JAMA Neurol. 2020 01 01; 77(1):103-108. PMID: 31633740; PMCID: PMC6806668.
    Citations: 17     Fields:    Translation:Humans
  33. Paixao L, Sikka P, Sun H, Jain A, Hogan J, Thomas R, Westover MB. Excess brain age in the sleep electroencephalogram predicts reduced life expectancy. Neurobiol Aging. 2020 04; 88:150-155. PMID: 31932049.
    Citations: 6     Fields:    
  34. Abou Jaoude M, Jing J, Sun H, Jacobs CS, Pellerin KR, Westover MB, Cash SS, Lam AD. Detection of mesial temporal lobe epileptiform discharges on intracranial electrodes using deep learning. Clin Neurophysiol. 2020 01; 131(1):133-141. PMID: 31760212.
    Citations: 6     Fields:    Translation:Humans
  35. Sun H, Kimchi E, Akeju O, Nagaraj SB, McClain LM, Zhou DW, Boyle E, Zheng WL, Ge W, Westover MB. Automated tracking of level of consciousness and delirium in critical illness using deep learning. NPJ Digit Med. 2019; 2:89. PMID: 31508499; PMCID: PMC6733797.
    Citations: 7     
  36. Goldenholz D, Sun H, Westover B. Commentary on "Predicting seizure freedom after epilepsy surgery, a challenge in clinical practice". Epilepsy Behav. 2019 10; 99:106408. PMID: 31375412.
    Citations: 1     Fields:    
  37. Sun H, Paixao L, Oliva JT, Goparaju B, Carvalho DZ, van Leeuwen KG, Akeju O, Thomas RJ, Cash SS, Bianchi MT, Westover MB. Brain age from the electroencephalogram of sleep. Neurobiol Aging. 2019 02; 74:112-120. PMID: 30448611; PMCID: PMC6478501.
    Citations: 16     Fields:    Translation:Humans
  38. Sun H, Jia J, Goparaju B, Huang GB, Sourina O, Bianchi MT, Westover MB. Large-Scale Automated Sleep Staging. Sleep. 2017 10 01; 40(10). PMID: 29029305.
    Citations: 31     Fields:    Translation:Humans
  39. Xu HS, Zhao L, Sun HS, Ren YF, Ding T, Chang S, Wang HD, Li M, Guo Z. [Water Quality Analysis of Beijing Segment of South-to-North Water Diversion Middle Route Project]. Huan Jing Ke Xue. 2017 Apr 08; 38(4):1357-1365. PMID: 29965136.
    Citations:    Fields:    
  40. Sun H, Sourina O, Huang GB. Learning Polychronous Neuronal Groups Using Joint Weight-Delay Spike-Timing-Dependent Plasticity. Neural Comput. 2016 10; 28(10):2181-212. PMID: 27557107.
    Citations: 4     Fields:    
  41. Sun H, Wang H, Zhu R, Tang K, Gong Q, Cui J, Cao Z, Liu Q. iPEAP: integrating multiple omics and genetic data for pathway enrichment analysis. Bioinformatics. 2014 Mar 01; 30(5):737-9. PMID: 24092766.
    Citations: 13     Fields:    Translation:HumansCells
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Funded by the NIH National Center for Advancing Translational Sciences through its Clinical and Translational Science Awards Program, grant number UL1TR002541.