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Qing Yu, Ph.D.

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Department
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Biography
University of Wisconsin - Madison, Madison, WIPhD05/2017Pharmaceutical Sciences
Tianjin University, Tianjin, PRCBS06/2012Pharmaceutical Sciences

Bibliographic
Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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  1. Yu Q, Xiao H, Jedrychowski MP, Schweppe DK, Navarrete-Perea J, Knott J, Rogers J, Chouchani ET, Gygi SP. Sample multiplexing for targeted pathway proteomics in aging mice. Proc Natl Acad Sci U S A. 2020 May 05; 117(18):9723-9732. PMID: 32332170.
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  2. Yu Q, Paulo JA, Naverrete-Perea J, McAlister GC, Canterbury JD, Bailey DJ, Robitaille AM, Huguet R, Zabrouskov V, Gygi SP, Schweppe DK. Benchmarking the Orbitrap Tribrid Eclipse for Next Generation Multiplexed Proteomics. Anal Chem. 2020 May 05; 92(9):6478-6485. PMID: 32250601.
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  3. Schweppe DK, Eng JK, Yu Q, Bailey D, Rad R, Navarrete-Perea J, Huttlin EL, Erickson BK, Paulo JA, Gygi SP. Full-Featured, Real-Time Database Searching Platform Enables Fast and Accurate Multiplexed Quantitative Proteomics. J Proteome Res. 2020 May 01; 19(5):2026-2034. PMID: 32126768.
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  4. Xiao H, Jedrychowski MP, Schweppe DK, Huttlin EL, Yu Q, Heppner DE, Li J, Long J, Mills EL, Szpyt J, He Z, Du G, Garrity R, Reddy A, Vaites LP, Paulo JA, Zhang T, Gray NS, Gygi SP, Chouchani ET. A Quantitative Tissue-Specific Landscape of Protein Redox Regulation during Aging. Cell. 2020 Mar 05; 180(5):968-983.e24. PMID: 32109415.
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  5. Erickson BK, Schweppe DK, Yu Q, Rad R, Haas W, McAlister GC, Gygi SP. Parallel Notched Gas-Phase Enrichment for Improved Proteome Identification and Quantification with Fast Spectral Acquisition Rates. J Proteome Res. 2020 Jul 02; 19(7):2750-2757. PMID: 31990573.
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  6. Cao Q, Yu Q, Liu Y, Chen Z, Li L. Signature-Ion-Triggered Mass Spectrometry Approach Enabled Discovery of N- and O-Linked Glycosylated Neuropeptides in the Crustacean Nervous System. J Proteome Res. 2020 Feb 07; 19(2):634-643. PMID: 31875397.
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  7. Dieterich IA, Lawton AJ, Peng Y, Yu Q, Rhoads TW, Overmyer KA, Cui Y, Armstrong EA, Howell PR, Burhans MS, Li L, Denu JM, Coon JJ, Anderson RM, Puglielli L. Acetyl-CoA flux regulates the proteome and acetyl-proteome to maintain intracellular metabolic crosstalk. Nat Commun. 2019 09 02; 10(1):3929. PMID: 31477734.
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  8. Gygi JP, Yu Q, Navarrete-Perea J, Rad R, Gygi SP, Paulo JA. Web-Based Search Tool for Visualizing Instrument Performance Using the Triple Knockout (TKO) Proteome Standard. J Proteome Res. 2019 02 01; 18(2):687-693. PMID: 30451507.
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  9. Zhu J, Chen Z, Zhang J, An M, Wu J, Yu Q, Skilton SJ, Bern M, Ilker Sen K, Li L, Lubman DM. Differential Quantitative Determination of Site-Specific Intact N-Glycopeptides in Serum Haptoglobin between Hepatocellular Carcinoma and Cirrhosis Using LC-EThcD-MS/MS. J Proteome Res. 2019 01 04; 18(1):359-371. PMID: 30370771.
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  10. Chen Z, Yu Q, Hao L, Liu F, Johnson J, Tian Z, Kao WJ, Xu W, Li L. Site-specific characterization and quantitation of N-glycopeptides in PKM2 knockout breast cancer cells using DiLeu isobaric tags enabled by electron-transfer/higher-energy collision dissociation (EThcD). Analyst. 2018 May 29; 143(11):2508-2519. PMID: 29687791.
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  11. Navarrete-Perea J, Yu Q, Gygi SP, Paulo JA. Streamlined Tandem Mass Tag (SL-TMT) Protocol: An Efficient Strategy for Quantitative (Phospho)proteome Profiling Using Tandem Mass Tag-Synchronous Precursor Selection-MS3. J Proteome Res. 2018 06 01; 17(6):2226-2236. PMID: 29734811.
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  12. Glover MS, Yu Q, Chen Z, Shi X, Keng KC, Li L. International Journal of Mass Spectrometry. Characterization of intact sialylated glycopeptides and phosphorylated glycopeptides from IMAC enriched samples by EThcD fragmentation: Toward combining phosphoproteomics and glycoproteomics. 2018; 427:35-42. View Publication.
  13. Yang N, Anapindi KDB, Rubakhin SS, Wei P, Yu Q, Li L, Kenny PJ, Sweedler JV. Neuropeptidomics of the Rat Habenular Nuclei. J Proteome Res. 2018 04 06; 17(4):1463-1473. PMID: 29518334.
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  14. Adnani N, Chevrette MG, Adibhatla SN, Zhang F, Yu Q, Braun DR, Nelson J, Simpkins SW, McDonald BR, Myers CL, Piotrowski JS, Thompson CJ, Currie CR, Li L, Rajski SR, Bugni TS. Coculture of Marine Invertebrate-Associated Bacteria and Interdisciplinary Technologies Enable Biosynthesis and Discovery of a New Antibiotic, Keyicin. ACS Chem Biol. 2017 12 15; 12(12):3093-3102. PMID: 29121465.
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  15. Yu Q, Canales A, Glover MS, Das R, Shi X, Liu Y, Keller MP, Attie AD, Li L. Targeted Mass Spectrometry Approach Enabled Discovery of O-Glycosylated Insulin and Related Signaling Peptides in Mouse and Human Pancreatic Islets. Anal Chem. 2017 09 05; 89(17):9184-9191. PMID: 28726377.
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  16. Yu Q, Wang B, Chen Z, Urabe G, Glover MS, Shi X, Guo LW, Kent KC, Li L. Electron-Transfer/Higher-Energy Collision Dissociation (EThcD)-Enabled Intact Glycopeptide/Glycoproteome Characterization. J Am Soc Mass Spectrom. 2017 09; 28(9):1751-1764. PMID: 28695533.
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  17. Yu Q, Shi X, Feng Y, Kent KC, Li L. Improving data quality and preserving HCD-generated reporter ions with EThcD for isobaric tag-based quantitative proteomics and proteome-wide PTM studies. Anal Chim Acta. 2017 May 22; 968:40-49. PMID: 28395773.
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  18. Yu Q, Shi X, Greer T, Lietz CB, Kent KC, Li L. Evaluation and Application of Dimethylated Amino Acids as Isobaric Tags for Quantitative Proteomics of the TGF-ß/Smad3 Signaling Pathway. J Proteome Res. 2016 09 02; 15(9):3420-31. PMID: 27457343.
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  19. Jia C, Lietz CB, Yu Q, Li L. Grant J., Li H. (eds) Analysis of Post-Translational Modifications and Proteolysis in Neuroscience. Site-specific Localization of D-Amino Acids in Bioactive Peptides by Ion Mobility Spectrometry. 2016; 114:43-53. View Publication.
  20. Yu Q, Liang Z, OuYang C, Li L. Biologically Active Peptides in Invertebrates: Discovery and Functional Studies. 2015; 1-182. View Publication.
  21. Buchberger A, Yu Q, Li L. Advances in Mass Spectrometric Tools for Probing Neuropeptides. Annu Rev Anal Chem (Palo Alto Calif). 2015; 8:485-509. PMID: 26070718.
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  22. Lietz CB, Yu Q, Li L. Large-scale collision cross-section profiling on a traveling wave ion mobility mass spectrometer. J Am Soc Mass Spectrom. 2014 Dec; 25(12):2009-19. PMID: 24845359.
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  23. Jia C, Yu Q, Wang J, Li L. Qualitative and quantitative top-down mass spectral analysis of crustacean hyperglycemic hormones in response to feeding. Proteomics. 2014 May; 14(10):1185-94. PMID: 24532205.
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  24. Yu Q, OuYang C, Liang Z, Li L. EuPA Open Proteomics. Mass spectrometric characterization of the crustacean neuropeptidome. 2014; 3:152-170. View Publication.
  25. Jia C, Lietz CB, Yu Q, Li L. Site-specific characterization of (D)-amino acid containing peptide epimers by ion mobility spectrometry. Anal Chem. 2014 Mar 18; 86(6):2972-81. PMID: 24328107.
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  26. Qi R, Wang XN, Dekorver KA, Tang Y, Wang CC, Li Q, Li H, Lv MC, Yu Q, Hsung RP. A Convenient Synthesis of ?-Amino-Ynamides via Additions of Lithiated Ynamides to Aryl Imines. Observation of an Aza-Meyer-Schuster Rearrangement. Synthesis (Stuttg). 2013 Jul 01; 45(13):1749-1758. PMID: 23976795.
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  27. Jia C, Lietz CB, Ye H, Hui L, Yu Q, Yoo S, Li L. A multi-scale strategy for discovery of novel endogenous neuropeptides in the crustacean nervous system. J Proteomics. 2013 Oct 08; 91:1-12. PMID: 23806756.
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Funded by the NIH National Center for Advancing Translational Sciences through its Clinical and Translational Science Awards Program, grant number UL1TR002541.