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Damayanti Chakraborty, Ph.D.


Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
  1. Van Rechem C, Ji F, Chakraborty D, Black JC, Sadreyev RI, Whetstine JR. Collective regulation of chromatin modifications predicts replication timing during cell cycle. Cell Rep. 2021 Oct 05; 37(1):109799. PMID: 34610305.
    Citations:    Fields:    
  2. Sheng W, Liu Y, Chakraborty D, Debo B, Shi Y. Simultaneous Inhibition of LSD1 and TGFß Enables Eradication of Poorly Immunogenic Tumors with Anti-PD-1 Treatment. Cancer Discov. 2021 Aug; 11(8):1970-1981. PMID: 33687985.
    Citations: 2     Fields:    
  3. Wang L, Chakraborty D, Iqbal K, Soares MJ. SUV39H2 controls trophoblast stem cell fate. Biochim Biophys Acta Gen Subj. 2021 06; 1865(6):129867. PMID: 33556426.
    Citations:    Fields:    Translation:AnimalsCells
  4. Van Rechem C, Ji F, Mishra S, Chakraborty D, Murphy SE, Dillingham ME, Sadreyev RI, Whetstine JR. The lysine demethylase KDM4A controls the cell-cycle expression of replicative canonical histone genes. Biochim Biophys Acta Gene Regul Mech. 2020 10; 1863(10):194624. PMID: 32798738.
    Citations: 2     Fields:    Translation:HumansCells
  5. Gu L, Wang L, Chen H, Hong J, Shen Z, Dhall A, Lao T, Liu C, Wang Z, Xu Y, Tang HW, Chakraborty D, Chen J, Liu Z, Rogulja D, Perrimon N, Wu H, Shi Y. CG14906 (mettl4) mediates m6A methylation of U2 snRNA in Drosophila. Cell Discov. 2020; 6:44. PMID: 32637152.
    Citations: 5     
  6. Clarke TL, Tang R, Chakraborty D, Van Rechem C, Ji F, Mishra S, Ma A, Kaniskan HÜ, Jin J, Lawrence MS, Sadreyev RI, Whetstine JR. Histone Lysine Methylation Dynamics Control EGFR DNA Copy-Number Amplification. Cancer Discov. 2020 02; 10(2):306-325. PMID: 31776131.
    Citations: 10     Fields:    Translation:HumansCells
  7. Mishra S, Van Rechem C, Pal S, Clarke TL, Chakraborty D, Mahan SD, Black JC, Murphy SE, Lawrence MS, Daniels DL, Whetstine JR. Cross-talk between Lysine-Modifying Enzymes Controls Site-Specific DNA Amplifications. Cell. 2018 Nov 29; 175(6):1716. PMID: 30500540.
    Citations: 3     Fields:    
  8. Mishra S, Van Rechem C, Pal S, Clarke TL, Chakraborty D, Mahan SD, Black JC, Murphy SE, Lawrence MS, Daniels DL, Whetstine JR. Cross-talk between Lysine-Modifying Enzymes Controls Site-Specific DNA Amplifications. Cell. 2018 08 09; 174(4):803-817.e16. PMID: 30057114.
    Citations: 13     Fields:    Translation:HumansCells
  9. Chakraborty D, Scott RL, Soares MJ. Hypoxia Signaling and Placental Adaptations. Methods Mol Biol. 2018; 1742:167-183. PMID: 29330799.
    Citations:    Fields:    Translation:AnimalsCells
  10. Chakraborty D, Muto M, Soares MJ. Ex vivo Trophoblast-specific Genetic Manipulation Using Lentiviral Delivery. Bio Protoc. 2017 Dec 20; 7(24). PMID: 29367940.
    Citations: 2     
  11. Rumi MAK, Singh P, Roby KF, Zhao X, Iqbal K, Ratri A, Lei T, Cui W, Borosha S, Dhakal P, Kubota K, Chakraborty D, Vivian JL, Wolfe MW, Soares MJ. Defining the Role of Estrogen Receptor ß in the Regulation of Female Fertility. Endocrinology. 2017 07 01; 158(7):2330-2343. PMID: 28520870.
    Citations: 18     Fields:    Translation:HumansAnimalsCells
  12. Bu P, Yagi S, Shiota K, Alam SMK, Vivian JL, Wolfe MW, Rumi MAK, Chakraborty D, Kubota K, Dhakal P, Soares MJ. Origin of a rapidly evolving homeostatic control system programming testis function. J Endocrinol. 2017 Aug; 234(2):217-232. PMID: 28576872.
    Citations: 2     Fields:    Translation:Animals
  13. Renaud SJ, Scott RL, Chakraborty D, Rumi MA, Soares MJ. Natural killer-cell deficiency alters placental development in rats. Biol Reprod. 2017 01 01; 96(1):145-158. PMID: 28395334.
    Citations: 14     Fields:    Translation:AnimalsCells
  14. Chakraborty D, Cui W, Rosario GX, Scott RL, Dhakal P, Renaud SJ, Tachibana M, Rumi MA, Mason CW, Krieg AJ, Soares MJ. HIF-KDM3A-MMP12 regulatory circuit ensures trophoblast plasticity and placental adaptations to hypoxia. Proc Natl Acad Sci U S A. 2016 11 15; 113(46):E7212-E7221. PMID: 27807143.
    Citations: 31     Fields:    Translation:HumansAnimalsCells
  15. Imakawa K, Dhakal P, Kubota K, Kusama K, Chakraborty D, Karim Rumi MA, Soares MJ. CITED2 modulation of trophoblast cell differentiation: insights from global transcriptome analysis. Reproduction. 2016 May; 151(5):509-16. PMID: 26917451.
    Citations: 1     Fields:    Translation:AnimalsCells
  16. Renaud SJ, Chakraborty D, Mason CW, Rumi MA, Vivian JL, Soares MJ. OVO-like 1 regulates progenitor cell fate in human trophoblast development. Proc Natl Acad Sci U S A. 2015 Nov 10; 112(45):E6175-84. PMID: 26504231.
    Citations: 23     Fields:    Translation:HumansAnimalsCells
  17. Dhakal P, Rumi MA, Kubota K, Chakraborty D, Chien J, Roby KF, Soares MJ. Neonatal Progesterone Programs Adult Uterine Responses to Progesterone and Susceptibility to Uterine Dysfunction. Endocrinology. 2015 Oct; 156(10):3791-803. PMID: 26204463.
    Citations: 6     Fields:    Translation:AnimalsCells
  18. Rumi MA, Dhakal P, Kubota K, Chakraborty D, Lei T, Larson MA, Wolfe MW, Roby KF, Vivian JL, Soares MJ. Generation of Esr1-knockout rats using zinc finger nuclease-mediated genome editing. Endocrinology. 2014 May; 155(5):1991-9. PMID: 24506075.
    Citations: 30     Fields:    Translation:AnimalsCells
  19. Soares MJ, Chakraborty D, Kubota K, Renaud SJ, Rumi MA. Adaptive mechanisms controlling uterine spiral artery remodeling during the establishment of pregnancy. Int J Dev Biol. 2014; 58(2-4):247-59. PMID: 25023691.
    Citations: 24     Fields:    Translation:HumansAnimalsCells
  20. Kwok SC, Chakraborty D, Soares MJ, Dai G. Relative expression of proprotein convertases in rat ovaries during pregnancy. J Ovarian Res. 2013 Dec 11; 6(1):91. PMID: 24330629.
    Citations: 3     Fields:    
  21. Chakraborty D, Rumi MA, Soares MJ. NK cells, hypoxia and trophoblast cell differentiation. Cell Cycle. 2012 Jul 01; 11(13):2427-30. PMID: 22659845.
    Citations: 15     Fields:    Translation:HumansCells
  22. Soares MJ, Chakraborty D, Renaud SJ, Kubota K, Bu P, Konno T, Rumi MA. Regulatory pathways controlling the endovascular invasive trophoblast cell lineage. J Reprod Dev. 2012; 58(3):283-7. PMID: 22790871.
    Citations: 10     Fields:    Translation:HumansAnimalsCells
  23. Asanoma K, Kubota K, Chakraborty D, Renaud SJ, Wake N, Fukushima K, Soares MJ, Rumi MA. SATB homeobox proteins regulate trophoblast stem cell renewal and differentiation. J Biol Chem. 2012 Jan 13; 287(3):2257-68. PMID: 22123820.
    Citations: 22     Fields:    Translation:AnimalsCells
  24. Chakraborty D, Rumi MA, Konno T, Soares MJ. Natural killer cells direct hemochorial placentation by regulating hypoxia-inducible factor dependent trophoblast lineage decisions. Proc Natl Acad Sci U S A. 2011 Sep 27; 108(39):16295-300. PMID: 21900602.
    Citations: 54     Fields:    Translation:AnimalsCells
  25. Asanoma K, Rumi MA, Kent LN, Chakraborty D, Renaud SJ, Wake N, Lee DS, Kubota K, Soares MJ. FGF4-dependent stem cells derived from rat blastocysts differentiate along the trophoblast lineage. Dev Biol. 2011 Mar 01; 351(1):110-9. PMID: 21215265.
    Citations: 28     Fields:    Translation:AnimalsCells
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Funded by the NIH National Center for Advancing Translational Sciences through its Clinical and Translational Science Awards Program, grant number UL1TR002541.