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Mohamed Nadhir Djekidel, Ph.D.

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Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
  1. Xu B, Wang H, Wright S, Hyle J, Zhang Y, Shao Y, Niu M, Fan Y, Rosikiewicz W, Djekidel MN, Peng J, Lu R, Li C. Acute depletion of CTCF rewires genome-wide chromatin accessibility. Genome Biol. 2021 Aug 24; 22(1):244. PMID: 34429148.
    Citations:    Fields:    
  2. Djekidel MN, Rosikiewicz W, Peng JC, Kanneganti TD, Hui Y, Jin H, Hedges D, Schreiner P, Fan Y, Wu G, Xu B. CovidExpress: an interactive portal for intuitive investigation on SARS-CoV-2 related transcriptomes. bioRxiv. 2021 Aug 05. PMID: 34075382.
    Citations: 1     
  3. Chen Z, Djekidel MN, Zhang Y. Author Correction: Distinct dynamics and functions of H2AK119ub1 and H3K27me3 in mouse preimplantation embryos. Nat Genet. 2021 Jun; 53(6):936. PMID: 33888911.
    Citations:    Fields:    
  4. Chen Z, Djekidel MN, Zhang Y. Distinct dynamics and functions of H2AK119ub1 and H3K27me3 in mouse preimplantation embryos. Nat Genet. 2021 04; 53(4):551-563. PMID: 33821005.
    Citations: 3     Fields:    Translation:AnimalsCells
  5. Fu X, Djekidel MN, Zhang Y. A transcriptional roadmap for 2C-like-to-pluripotent state transition. Sci Adv. 2020 May; 6(22):eaay5181. PMID: 32523982.
    Citations: 8     Fields:    
  6. Fu X, Djekidel MN, Zhang Y. A transcriptional roadmap for 2C-like-to-pluripotent state transition. Sci Adv. 2020 May; 6(22). PMID: 32937415.
    Citations:    
  7. Bhattacherjee A, Djekidel MN, Chen R, Chen W, Tuesta LM, Zhang Y. Cell type-specific transcriptional programs in mouse prefrontal cortex during adolescence and addiction. Nat Commun. 2019 09 13; 10(1):4169. PMID: 31519873.
    Citations: 13     Fields:    Translation:Animals
  8. Fu X, Wu X, Djekidel MN, Zhang Y. Myc and Dnmt1 impede the pluripotent to totipotent state transition in embryonic stem cells. Nat Cell Biol. 2019 07; 21(7):835-844. PMID: 31209294.
    Citations: 16     Fields:    Translation:AnimalsCells
  9. Tuesta LM, Djekidel MN, Chen R, Lu F, Wang W, Sabatini BL, Zhang Y. In vivo nuclear capture and molecular profiling identifies Gmeb1 as a transcriptional regulator essential for dopamine neuron function. Nat Commun. 2019 06 07; 10(1):2508. PMID: 31175277.
    Citations:    Fields:    Translation:AnimalsCells
  10. Djekidel MN, Inoue A, Matoba S, Suzuki T, Zhang C, Lu F, Jiang L, Zhang Y. Reprogramming of Chromatin Accessibility in Somatic Cell Nuclear Transfer Is DNA Replication Independent. Cell Rep. 2018 05 15; 23(7):1939-1947. PMID: 29768195.
    Citations: 8     Fields:    Translation:AnimalsCells
  11. Djekidel MN, Chen Y, Zhang MQ. FIND: difFerential chromatin INteractions Detection using a spatial Poisson process. Genome Res. 2018 Feb 12. PMID: 29440282.
    Citations: 15     Fields:    
  12. Li Y, He Y, Liang Z, Wang Y, Chen F, Djekidel MN, Li G, Zhang X, Xiang S, Wang Z, Gao J, Zhang MQ, Chen Y. Alterations of specific chromatin conformation affect ATRA-induced leukemia cell differentiation. Cell Death Dis. 2018 02 08; 9(2):200. PMID: 29422670.
    Citations: 5     Fields:    Translation:HumansCells
  13. Liang Z, Li G, Wang Z, Djekidel MN, Li Y, Qian MP, Zhang MQ, Chen Y. BL-Hi-C is an efficient and sensitive approach for capturing structural and regulatory chromatin interactions. Nat Commun. 2017 11 20; 8(1):1622. PMID: 29158486.
    Citations: 15     Fields:    Translation:HumansCells
  14. Djekidel MN, Liang Z, Wang Q, Hu Z, Li G, Chen Y, Zhang MQ. 3CPET: finding co-factor complexes from ChIA-PET data using a hierarchical Dirichlet process. Genome Biol. 2015 Dec 22; 16:288. PMID: 26694485.
    Citations: 8     Fields:    Translation:HumansCells
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Funded by the NIH National Center for Advancing Translational Sciences through its Clinical and Translational Science Awards Program, grant number UL1TR002541.