Harvard Catalyst Profiles

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Jose Navarrete-Perea, Ph.D.


National Autonomous University of Mexico, Mexico CityPh.D.01/2016Infection biology

Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
  1. Cullati SN, Chaikuad A, Chen JS, Gebel J, Tesmer L, Zhubi R, Navarrete-Perea J, Guillen RX, Gygi SP, Hummer G, Dötsch V, Knapp S, Gould KL. Kinase domain autophosphorylation rewires the activity and substrate specificity of CK1 enzymes. Mol Cell. 2022 Mar 21. PMID: 35353987.
    Citations:    Fields:    
  2. Navarrete-Perea J, Liu X, Rad R, Gygi JP, Gygi SP, Paulo JA. Assessing interference in isobaric tag-based sample multiplexing using an 18-plex interference standard. Proteomics. 2022 Apr; 22(7):e2100317. PMID: 34918453.
    Citations:    Fields:    
  3. Huttlin EL, Bruckner RJ, Navarrete-Perea J, Cannon JR, Baltier K, Gebreab F, Gygi MP, Thornock A, Zarraga G, Tam S, Szpyt J, Gassaway BM, Panov A, Parzen H, Fu S, Golbazi A, Maenpaa E, Stricker K, Guha Thakurta S, Zhang T, Rad R, Pan J, Nusinow DP, Paulo JA, Schweppe DK, Vaites LP, Harper JW, Gygi SP. Dual proteome-scale networks reveal cell-specific remodeling of the human interactome. Cell. 2021 05 27; 184(11):3022-3040.e28. PMID: 33961781.
    Citations: 44     Fields:    Translation:HumansCells
  4. Navarrete-Perea J, Guerra-Moreno A, Van Vranken J, Isasa M, Paulo JA, Gygi SP. Iron Deficiency and Recovery in Yeast: A Quantitative Proteomics Approach. J Proteome Res. 2021 05 07; 20(5):2751-2761. PMID: 33797912.
    Citations:    Fields:    Translation:HumansAnimals
  5. Navarrete-Perea J, Gygi SP, Paulo JA. HYpro16: A Two-Proteome Mixture to Assess Interference in Isobaric Tag-Based Sample Multiplexing Experiments. J Am Soc Mass Spectrom. 2021 Jan 06; 32(1):247-254. PMID: 33175540.
    Citations: 4     Fields:    Translation:HumansCells
  6. Navarrete-Perea J, Gygi SP, Paulo JA. Growth media selection alters the proteome profiles of three model microorganisms. J Proteomics. 2021 01 16; 231:104006. PMID: 33038513.
    Citations: 2     Fields:    Translation:AnimalsCells
  7. Yu Q, Xiao H, Jedrychowski MP, Schweppe DK, Navarrete-Perea J, Knott J, Rogers J, Chouchani ET, Gygi SP. Sample multiplexing for targeted pathway proteomics in aging mice. Proc Natl Acad Sci U S A. 2020 05 05; 117(18):9723-9732. PMID: 32332170.
    Citations: 14     Fields:    Translation:Animals
  8. Yu Q, Paulo JA, Naverrete-Perea J, McAlister GC, Canterbury JD, Bailey DJ, Robitaille AM, Huguet R, Zabrouskov V, Gygi SP, Schweppe DK. Benchmarking the Orbitrap Tribrid Eclipse for Next Generation Multiplexed Proteomics. Anal Chem. 2020 05 05; 92(9):6478-6485. PMID: 32250601.
    Citations: 8     Fields:    
  9. Schweppe DK, Eng JK, Yu Q, Bailey D, Rad R, Navarrete-Perea J, Huttlin EL, Erickson BK, Paulo JA, Gygi SP. Full-Featured, Real-Time Database Searching Platform Enables Fast and Accurate Multiplexed Quantitative Proteomics. J Proteome Res. 2020 05 01; 19(5):2026-2034. PMID: 32126768.
    Citations: 36     Fields:    
  10. Gygi JP, Navarrete-Perea J, Younesi S, Gygi SP, Paulo JA. A Triple Knockout Isobaric-Labeling Quality Control Platform with an Integrated Online Database Search. J Am Soc Mass Spectrom. 2020 Jul 01; 31(7):1344-1349. PMID: 32202424.
    Citations: 7     Fields:    Translation:Animals
  11. Schweppe DK, Prasad S, Belford MW, Navarrete-Perea J, Bailey DJ, Huguet R, Jedrychowski MP, Rad R, McAlister G, Abbatiello SE, Wouters ER, Zabrouskov V, Dunyach JJ, Paulo JA, Gygi SP. Correction to Characterization and Optimization of Multiplexed Quantitative Analyses Using High-Field Asymmetric-Waveform Ion Mobility Mass Spectrometry. Anal Chem. 2020 Mar 17; 92(6):4690. PMID: 32134636.
    Citations:    Fields:    
  12. Paulo JA, Navarrete-Perea J, Gygi SP. Multiplexed proteome profiling of carbon source perturbations in two yeast species with SL-SP3-TMT. J Proteomics. 2020 01 06; 210:103531. PMID: 31626996.
    Citations: 6     Fields:    Translation:Animals
  13. Sendinc E, Valle-Garcia D, Dhall A, Chen H, Henriques T, Navarrete-Perea J, Sheng W, Gygi SP, Adelman K, Shi Y. PCIF1 Catalyzes m6Am mRNA Methylation to Regulate Gene Expression. Mol Cell. 2019 08 08; 75(3):620-630.e9. PMID: 31279659.
    Citations: 61     Fields:    Translation:HumansCells
  14. Gyuris A, Navarrete-Perea J, Jo A, Cristea S, Zhou S, Fraser K, Wei Z, Krichevsky AM, Weissleder R, Lee H, Gygi SP, Charest A. Physical and Molecular Landscapes of Mouse Glioma Extracellular Vesicles Define Heterogeneity. Cell Rep. 2019 06 25; 27(13):3972-3987.e6. PMID: 31242427.
    Citations: 18     Fields:    Translation:AnimalsCells
  15. Schweppe DK, Prasad S, Belford MW, Navarrete-Perea J, Bailey DJ, Huguet R, Jedrychowski MP, Rad R, McAlister G, Abbatiello SE, Woulters ER, Zabrouskov V, Dunyach JJ, Paulo JA, Gygi SP. Characterization and Optimization of Multiplexed Quantitative Analyses Using High-Field Asymmetric-Waveform Ion Mobility Mass Spectrometry. Anal Chem. 2019 03 19; 91(6):4010-4016. PMID: 30672687.
    Citations: 38     Fields:    Translation:HumansAnimalsCells
  16. Erickson BK, Mintseris J, Schweppe DK, Navarrete-Perea J, Erickson AR, Nusinow DP, Paulo JA, Gygi SP. Active Instrument Engagement Combined with a Real-Time Database Search for Improved Performance of Sample Multiplexing Workflows. J Proteome Res. 2019 03 01; 18(3):1299-1306. PMID: 30658528.
    Citations: 40     Fields:    Translation:Humans
  17. Paulo JA, Navarrete-Perea J, Guha Thakurta S, Gygi SP. TKO6: A Peptide Standard To Assess Interference for Unit-Resolved Isobaric Labeling Platforms. J Proteome Res. 2019 01 04; 18(1):565-570. PMID: 30481031.
    Citations: 9     Fields:    
  18. Gygi JP, Yu Q, Navarrete-Perea J, Rad R, Gygi SP, Paulo JA. Web-Based Search Tool for Visualizing Instrument Performance Using the Triple Knockout (TKO) Proteome Standard. J Proteome Res. 2019 02 01; 18(2):687-693. PMID: 30451507.
    Citations: 15     Fields:    
  19. Flores-Bautista J, Navarrete-Perea J, Fragoso G, Flisser A, Soberón X, Laclette JP. Fate of uptaken host proteins in Taenia solium and Taenia crassiceps cysticerci. Biosci Rep. 2018 08 31; 38(4). PMID: 29921579.
    Citations: 2     Fields:    Translation:HumansAnimals
  20. Núñez G, Villalobos N, Herrera CP, Navarrete-Perea J, Méndez A, Martinez-Maya JJ, Bobes RJ, Fragoso G, Sciutto E, Aguilar L, Del Arenal IP. Anti-GK1 antibodies damage Taenia crassiceps cysticerci through complement activation. Parasitol Res. 2018 Aug; 117(8):2543-2553. PMID: 29876861.
    Citations: 1     Fields:    Translation:Animals
  21. Navarrete-Perea J, Yu Q, Gygi SP, Paulo JA. Streamlined Tandem Mass Tag (SL-TMT) Protocol: An Efficient Strategy for Quantitative (Phospho)proteome Profiling Using Tandem Mass Tag-Synchronous Precursor Selection-MS3. J Proteome Res. 2018 06 01; 17(6):2226-2236. PMID: 29734811.
    Citations: 83     Fields:    Translation:Animals
  22. Paulo JA, Navarrete-Perea J, Erickson AR, Knott J, Gygi SP. An Internal Standard for Assessing Phosphopeptide Recovery from Metal Ion/Oxide Enrichment Strategies. J Am Soc Mass Spectrom. 2018 07; 29(7):1505-1511. PMID: 29671274.
    Citations: 11     Fields:    
  23. Bobes RJ, Navarrete-Perea J, Ochoa-Leyva A, Anaya VH, Hernández M, Cervantes-Torres J, Estrada K, Sánchez-Lopez F, Soberón X, Rosas G, Nunes CM, García-Varela M, Sotelo-Mundo RR, López-Zavala AA, Gevorkian G, Acero G, Laclette JP, Fragoso G, Sciutto E. Experimental and Theoretical Approaches To Investigate the Immunogenicity of Taenia solium-Derived KE7 Antigen. Infect Immun. 2017 12; 85(12). PMID: 28923896.
    Citations: 1     Fields:    Translation:AnimalsCells
  24. Navarrete-Perea J, Isasa M, Paulo JA, Corral-Corral R, Flores-Bautista J, Hernández-Téllez B, Bobes RJ, Fragoso G, Sciutto E, Soberón X, Gygi SP, Laclette JP. Quantitative multiplexed proteomics of Taenia solium cysts obtained from the skeletal muscle and central nervous system of pigs. PLoS Negl Trop Dis. 2017 Sep; 11(9):e0005962. PMID: 28945737.
    Citations: 5     Fields:    Translation:Animals
  25. Navarrete-Perea J, Moguel B, Bobes RJ, Villalobos N, Carrero JC, Sciutto E, Soberón X, Laclette JP. Protein profiles of Taenia solium cysts obtained from skeletal muscles and the central nervous system of pigs: Search for tissue-specific proteins. Exp Parasitol. 2017 Jan; 172:23-29. PMID: 27913109.
    Citations: 2     Fields:    Translation:Animals
  26. Luna-Nácar M, Navarrete-Perea J, Moguel B, Bobes RJ, Laclette JP, Carrero JC. Proteomic Study of Entamoeba histolytica Trophozoites, Cysts, and Cyst-Like Structures. PLoS One. 2016; 11(5):e0156018. PMID: 27228164.
    Citations: 9     Fields:    Translation:HumansAnimalsCells
  27. Navarrete-Perea J, Toledano-Magaña Y, De la Torre P, Sciutto E, Bobes RJ, Soberón X, Laclette JP. Role of porcine serum haptoglobin in the host-parasite relationship of Taenia solium cysticercosis. Mol Biochem Parasitol. 2016 06; 207(2):61-7. PMID: 27234210.
    Citations: 3     Fields:    Translation:HumansAnimalsCells
  28. Isasa M, Rose CM, Elsasser S, Navarrete-Perea J, Paulo JA, Finley DJ, Gygi SP. Multiplexed, Proteome-Wide Protein Expression Profiling: Yeast Deubiquitylating Enzyme Knockout Strains. J Proteome Res. 2015 Dec 04; 14(12):5306-17. PMID: 26503604.
    Citations: 20     Fields:    Translation:AnimalsCells
  29. Navarrete-Perea J, Orozco-Ramírez R, Moguel B, Sciutto E, Bobes RJ, Laclette JP. Differential antigenic protein recovery from Taenia solium cyst tissues using several detergents. Mol Biochem Parasitol. 2015 Jul; 202(1):22-8. PMID: 26341468.
    Citations: 2     Fields:    Translation:HumansAnimals
  30. Navarrete-Perea J, Moguel B, Mendoza-Hernández G, Fragoso G, Sciutto E, Bobes RJ, Laclette JP. Identification and quantification of host proteins in the vesicular fluid of porcine Taenia solium cysticerci. Exp Parasitol. 2014 Aug; 143:11-7. PMID: 24768954.
    Citations: 7     Fields:    Translation:AnimalsCells
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Funded by the NIH National Center for Advancing Translational Sciences through its Clinical and Translational Science Awards Program, grant number UL1TR002541.