Harvard Catalyst Profiles

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Radhika S. Khetani, Ph.D.

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Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
  1. Theocharidis G, Baltzis D, Roustit M, Tellechea A, Dangwal S, Khetani RS, Shu B, Zhao W, Fu J, Bhasin S, Kafanas A, Hui D, Sui SH, Patsopoulos NA, Bhasin M, Veves A. Integrated Skin Transcriptomics and Serum Multiplex Assays Reveal Novel Mechanisms of Wound Healing in Diabetic Foot Ulcers. Diabetes. 2020 10; 69(10):2157-2169. PMID: 32763913; PMCID: PMC7506837.
    Citations: 16     Fields:    Translation:HumansCells
  2. Leng S, Pignatti E, Khetani RS, Shah MS, Xu S, Miao J, Taketo MM, Beuschlein F, Barrett PQ, Carlone DL, Breault DT. ß-Catenin and FGFR2 regulate postnatal rosette-based adrenocortical morphogenesis. Nat Commun. 2020 04 03; 11(1):1680. PMID: 32245949.
    Citations: 11     Fields:    Translation:HumansAnimalsCells
  3. Sui SH, Kirchner R, Steinbaugh M, Boswell S, Piper M, Barrera V, Pantano L, Khetani R, Mistry M, Rutherford K, Hutchinson J. Supporting Single Cell RNA-seq Analysis at Harvard - A Community Approach. J Biomol Tech. 2019 Dec; 30(Suppl):S39. PMID: 31896961.
  4. Dong Y, Sanford RA, Inskeep WP, Srivastava V, Bulone V, Fields CJ, Yau PM, Sivaguru M, Ahrén D, Fouke KW, Weber J, Werth CR, Cann IK, Keating KM, Khetani RS, Hernandez AG, Wright C, Band M, Imai BS, Fried GA, Fouke BW. Physiology, Metabolism, and Fossilization of Hot-Spring Filamentous Microbial Mats. Astrobiology. 2019 12; 19(12):1442-1458. PMID: 31038352.
    Citations: 7     Fields:    Translation:Cells
  5. Hancock ML, Meyer RC, Mistry M, Khetani RS, Wagschal A, Shin T, Ho Sui SJ, Näär AM, Flanagan JG. Insulin Receptor Associates with Promoters Genome-wide and Regulates Gene Expression. Cell. 2019 04 18; 177(3):722-736.e22. PMID: 30955890; PMCID: PMC6478446.
    Citations: 38     Fields:    Translation:HumansAnimalsCells
  6. Spadafora R, Lu J, Khetani RS, Zhang C, Iberg A, Li H, Shi Y, Lerou PH. Lung-Resident Mesenchymal Stromal Cells Reveal Transcriptional Dynamics of Lung Development in Preterm Infants. Am J Respir Crit Care Med. 2018 10 01; 198(7):961-964. PMID: 29757681; PMCID: PMC6173067.
    Citations: 4     Fields:    Translation:HumansCells
  7. Jongeneel CV, Achinike-Oduaran O, Adebiyi E, Adebiyi M, Adeyemi S, Akanle B, Aron S, Ashano E, Bendou H, Botha G, Chimusa E, Choudhury A, Donthu R, Drnevich J, Falola O, Fields CJ, Hazelhurst S, Hendry L, Isewon I, Khetani RS, Kumuthini J, Kimuda MP, Magosi L, Mainzer LS, Maslamoney S, Mbiyavanga M, Meintjes A, Mugutso D, Mpangase P, Munthali R, Nembaware V, Ndhlovu A, Odia T, Okafor A, Oladipo O, Panji S, Pillay V, Rendon G, Sengupta D, Mulder N. Assessing computational genomics skills: Our experience in the H3ABioNet African bioinformatics network. PLoS Comput Biol. 2017 Jun; 13(6):e1005419. PMID: 28570565; PMCID: PMC5453403.
    Citations: 5     Fields:    Translation:Humans
  8. Mulder NJ, Adebiyi E, Alami R, Benkahla A, Brandful J, Doumbia S, Everett D, Fadlelmola FM, Gaboun F, Gaseitsiwe S, Ghazal H, Hazelhurst S, Hide W, Ibrahimi A, Jaufeerally Fakim Y, Jongeneel CV, Joubert F, Kassim S, Kayondo J, Kumuthini J, Lyantagaye S, Makani J, Mansour Alzohairy A, Masiga D, Moussa A, Nash O, Ouwe Missi Oukem-Boyer O, Owusu-Dabo E, Panji S, Patterton H, Radouani F, Sadki K, Seghrouchni F, Tastan Bishop Ö, Tiffin N, Ulenga N. H3ABioNet, a sustainable pan-African bioinformatics network for human heredity and health in Africa. Genome Res. 2016 Feb; 26(2):271-7. PMID: 26627985; PMCID: PMC4728379.
    Citations: 48     Fields:    Translation:Humans
  9. Dogramaci M, Foley ME, Horvath DP, Hernandez AG, Khetani RS, Fields CJ, Keating KM, Mikel MA, Anderson JV. Glyphosate's impact on vegetative growth in leafy spurge identifies molecular processes and hormone cross-talk associated with increased branching. BMC Genomics. 2015 May 19; 16:395. PMID: 25986459.
    Citations: 10     Fields:    Translation:AnimalsCells
  10. Kenny PJ, Zhou H, Kim M, Skariah G, Khetani RS, Drnevich J, Arcila ML, Kosik KS, Ceman S. MOV10 and FMRP regulate AGO2 association with microRNA recognition elements. Cell Rep. 2014 Dec 11; 9(5):1729-1741. PMID: 25464849.
    Citations: 61     Fields:    Translation:HumansAnimalsCells
  11. Elsik CG, Worley KC, Bennett AK, Beye M, Camara F, Childers CP, de Graaf DC, Debyser G, Deng J, Devreese B, Elhaik E, Evans JD, Foster LJ, Graur D, Guigo R, Hoff KJ, Holder ME, Hudson ME, Hunt GJ, Jiang H, Joshi V, Khetani RS, Kosarev P, Kovar CL, Ma J, Maleszka R, Moritz RF, Munoz-Torres MC, Murphy TD, Muzny DM, Newsham IF, Reese JT, Robertson HM, Robinson GE, Rueppell O, Solovyev V, Stanke M, Stolle E, Tsuruda JM, Vaerenbergh MV, Waterhouse RM, Weaver DB, Whitfield CW, Wu Y, Zdobnov EM, Zhang L, Zhu D, Gibbs RA. Finding the missing honey bee genes: lessons learned from a genome upgrade. BMC Genomics. 2014 Jan 30; 15:86. PMID: 24479613.
    Citations: 148     Fields:    Translation:AnimalsCells
  12. Cingolani P, Cao X, Khetani RS, Chen CC, Coon M, Sammak A, Bollig-Fischer A, Land S, Huang Y, Hudson ME, Garfinkel MD, Zhong S, Robinson GE, Ruden DM. Intronic non-CG DNA hydroxymethylation and alternative mRNA splicing in honey bees. BMC Genomics. 2013 Sep 30; 14:666. PMID: 24079845; PMCID: PMC3850688.
    Citations: 28     Fields:    Translation:AnimalsCells
  13. Davis C, Kota K, Baldhandapani V, Gong W, Abubucker S, Becker E, Martin J, Wylie KM, Khetani R, Hudson ME, Weinstock GM, Mitreva M. mBLAST: Keeping up with the sequencing explosion for (meta)genome analysis. J Data Mining Genomics Proteomics. 2015 Aug; 4(3). PMID: 26500804; PMCID: PMC4612494.
    Citations: 12     
  14. Sen Sarma M, Arcoleo D, Khetani RS, Chee B, Ling X, He X, Jiang J, Mei Q, Zhai C, Schatz B. BeeSpace Navigator: exploratory analysis of gene function using semantic indexing of biological literature. Nucleic Acids Res. 2011 Jul; 39(Web Server issue):W462-9. PMID: 21558175.
    Citations:    Fields:    Translation:Animals
  15. He X, Li Y, Khetani R, Sanders B, Lu Y, Ling X, Zhai C, Schatz B. BSQA: integrated text mining using entity relation semantics extracted from biological literature of insects. Nucleic Acids Res. 2010 Jul; 38(Web Server issue):W175-81. PMID: 20576702.
    Citations: 3     Fields:    Translation:Animals
  16. Page SL, Khetani RS, Lake CM, Nielsen RJ, Jeffress JK, Warren WD, Bickel SE, Hawley RS. Corona is required for higher-order assembly of transverse filaments into full-length synaptonemal complex in Drosophila oocytes. PLoS Genet. 2008 Sep 19; 4(9):e1000194. PMID: 18802461; PMCID: PMC2529403.
    Citations: 36     Fields:    Translation:AnimalsCells
  17. Khetani RS, Bickel SE. Regulation of meiotic cohesion and chromosome core morphogenesis during pachytene in Drosophila oocytes. J Cell Sci. 2007 Sep 01; 120(Pt 17):3123-37. PMID: 17698920.
    Citations: 39     Fields:    Translation:AnimalsCells
  18. Chakravarty A, Carlson JM, Khetani RS, Gross RH. A novel ensemble learning method for de novo computational identification of DNA binding sites. BMC Bioinformatics. 2007 Jul 12; 8:249. PMID: 17626633.
    Citations: 24     Fields:    Translation:Cells
  19. Chakravarty A, Carlson JM, Khetani RS, DeZiel CE, Gross RH. SPACER: identification of cis-regulatory elements with non-contiguous critical residues. Bioinformatics. 2007 Apr 15; 23(8):1029-31. PMID: 17470480.
    Citations: 12     Fields:    Translation:Cells
  20. Carlson JM, Chakravarty A, Khetani RS, Gross RH. Bounded search for de novo identification of degenerate cis-regulatory elements. BMC Bioinformatics. 2006 May 15; 7:254. PMID: 16700920.
    Citations: 12     Fields:    Translation:Cells
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Funded by the NIH National Center for Advancing Translational Sciences through its Clinical and Translational Science Awards Program, grant number UL1TR002541.