Harvard Catalyst Profiles

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Satrajit S Ghosh, Ph.D.

Title
Institution
Department
Address

Overview
Satrajit is a Principal Research Scientist at the McGovern Institute for Brain Research at MIT, an Assistant Professor in the Department of Otolaryngology at Harvard Medical School, and a faculty member in the Speech and Hearing Biosciences and Technology program in the Harvard Division of Medical Sciences. His research interests span computer science and neuroimaging, specifically in the areas of applied machine learning, software engineering, and applications of neuroimaging. The primary focus of his research group is to develop knowledge discovery platforms by integrating a set of multidisciplinary projects that span precision medicine in mental health, imaging genetics, machine learning, and dataflow systems for reproducible research. He is a lead architect of the Nipype dataflow platform, an ardent proponent of decentralized and distributed Web solutions for data sharing, querying, and computing, and a strong believer in solving problems through collaboration and crowd-sourcing.

Research
The research activities and funding listed below are automatically derived from NIH ExPORTER and other sources, which might result in incorrect or missing items. Faculty can login to make corrections and additions.
  1. RF1MH121885 (GHOSH, SATRAJIT SUJIT) Aug 1, 2020 - Jul 31, 2023
    NIH
    Nobrainer: A robust and validated neural network tool suite for imagers
    Role: Principal Investigator
  2. R24MH117295 (GHOSH, SATRAJIT SUJIT) Aug 1, 2019 - Apr 30, 2024
    NIH
    DANDI: Distributed Archives for Neurophysiology Data Integration
    Role: Principal Investigator
  3. RF1MH120021 (KEATOR, DAVID BRYANT) Jul 25, 2019 - Jun 30, 2021
    NIH
    The Neuroimaging Data Model: FAIR descriptors of Brain Initiative Imaging Experiments
    Role: Co-Investigator
  4. R01MH109682 (YARKONI, TAL) Sep 23, 2016 - Jul 31, 2021
    NIH
    NeuroScout: A cloud-based platform for flexible re-analysis of naturalistic fMRI datasets
    Role: Co-Investigator
  5. P41EB019936 (KENNEDY, DAVID NELSON) Apr 15, 2016 - Jan 31, 2021
    NIH
    Center for Reproducible Neuroimaging Computation (CRNC)
    Role: Director of Technical Research and Development Project 2: Data models and Integration

Bibliographic
Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
  1. Low DM, Randolph G, Rao V, Ghosh SS, Song PC. Uncovering the important acoustic features for detecting vocal fold paralysis with explainable machine learning. medRxiv. 2021 Jun 24. PMID: 33501466.
    Citations:    
  2. Gau R, Noble S, Heuer K, Bottenhorn KL, Bilgin IP, Yang YF, Huntenburg JM, Bayer JMM, Bethlehem RAI, Rhoads SA, Vogelbacher C, Borghesani V, Levitis E, Wang HT, Van Den Bossche S, Kobeleva X, Legarreta JH, Guay S, Atay SM, Varoquaux GP, Huijser DC, Sandström MS, Herholz P, Nastase SA, Badhwar A, Dumas G, Schwab S, Moia S, Dayan M, Bassil Y, Brooks PP, Mancini M, Shine JM, O'Connor D, Xie X, Poggiali D, Friedrich P, Heinsfeld AS, Riedl L, Toro R, Caballero-Gaudes C, Eklund A, Garner KG, Nolan CR, Demeter DV, Barrios FA, Merchant JS, McDevitt EA, Oostenveld R, Craddock RC, Rokem A, Doyle A, Ghosh SS, Nikolaidis A, Stanley OW, Uruñuela E. Brainhack: Developing a culture of open, inclusive, community-driven neuroscience. Neuron. 2021 06 02; 109(11):1769-1775. PMID: 33932337.
    Citations:    Fields:    
  3. Abrams MB, Bjaalie JG, Das S, Egan GF, Ghosh SS, Goscinski WJ, Grethe JS, Kotaleski JH, Ho ETW, Kennedy DN, Lanyon LJ, Leergaard TB, Mayberg HS, Milanesi L, Moucek R, Poline JB, Roy PK, Strother SC, Tang TB, Tiesinga P, Wachtler T, Wójcik DK, Martone ME. Correction to: A Standards Organization for Open and FAIR Neuroscience: the International Neuroinformatics Coordinating Facility. Neuroinformatics. 2021 Apr 13. PMID: 33851344.
    Citations:    Fields:    
  4. Bannier E, Barker G, Borghesani V, Broeckx N, Clement P, Emblem KE, Ghosh S, Glerean E, Gorgolewski KJ, Havu M, Halchenko YO, Herholz P, Hespel A, Heunis S, Hu Y, Hu CP, Huijser D, de la Iglesia Vayá M, Jancalek R, Katsaros VK, Kieseler ML, Maumet C, Moreau CA, Mutsaerts HJ, Oostenveld R, Ozturk-Isik E, Pascual Leone Espinosa N, Pellman J, Pernet CR, Pizzini FB, Trbalic AŠ, Toussaint PJ, Visconti di Oleggio Castello M, Wang F, Wang C, Zhu H. The Open Brain Consent: Informing research participants and obtaining consent to share brain imaging data. Hum Brain Mapp. 2021 05; 42(7):1945-1951. PMID: 33522661.
    Citations: 3     Fields:    
  5. Abrams MB, Bjaalie JG, Das S, Egan GF, Ghosh SS, Goscinski WJ, Grethe JS, Kotaleski JH, Ho ETW, Kennedy DN, Lanyon LJ, Leergaard TB, Mayberg HS, Milanesi L, Moucek R, Poline JB, Roy PK, Strother SC, Tang TB, Tiesinga P, Wachtler T, Wójcik DK, Martone ME. A Standards Organization for Open and FAIR Neuroscience: the International Neuroinformatics Coordinating Facility. Neuroinformatics. 2021 Jan 27. PMID: 33506383.
    Citations: 1     Fields:    
  6. Lee YJ, Guell X, Hubbard NA, Siless V, Frosch IR, Goncalves M, Lo N, Nair A, Ghosh SS, Hofmann SG, Auerbach RP, Pizzagalli DA, Yendiki A, Gabrieli JDE, Whitfield-Gabrieli S, Anteraper SA. Functional Alterations in Cerebellar Functional Connectivity in Anxiety Disorders. Cerebellum. 2021 Jun; 20(3):392-401. PMID: 33210245.
    Citations: 2     Fields:    
  7. Low DM, Rumker L, Talkar T, Torous J, Cecchi G, Ghosh SS. Natural Language Processing Reveals Vulnerable Mental Health Support Groups and Heightened Health Anxiety on Reddit During COVID-19: Observational Study. J Med Internet Res. 2020 10 12; 22(10):e22635. PMID: 32936777.
    Citations: 18     Fields:    Translation:HumansCellsPHPublic Health
  8. Esteban O, Ciric R, Finc K, Blair RW, Markiewicz CJ, Moodie CA, Kent JD, Goncalves M, DuPre E, Gomez DEP, Ye Z, Salo T, Valabregue R, Amlien IK, Liem F, Jacoby N, Stojic H, Cieslak M, Urchs S, Halchenko YO, Ghosh SS, De La Vega A, Yarkoni T, Wright J, Thompson WH, Poldrack RA, Gorgolewski KJ. Analysis of task-based functional MRI data preprocessed with fMRIPrep. Nat Protoc. 2020 07; 15(7):2186-2202. PMID: 32514178.
    Citations: 6     Fields:    Translation:HumansAnimals
  9. Hung Y, Uchida M, Gaillard SL, Woodworth H, Kelberman C, Capella J, Kadlec K, Goncalves M, Ghosh S, Yendiki A, Chai XJ, Hirshfeld-Becker DR, Whitfield-Gabrieli S, Gabrieli JDE, Biederman J. Cingulum-Callosal white-matter microstructure associated with emotional dysregulation in children: A diffusion tensor imaging study. Neuroimage Clin. 2020; 27:102266. PMID: 32408198.
    Citations: 1     Fields:    Translation:Humans
  10. Charles AS, Falk B, Turner N, Pereira TD, Tward D, Pedigo BD, Chung J, Burns R, Ghosh SS, Kebschull JM, Silversmith W, Vogelstein JT. Toward Community-Driven Big Open Brain Science: Open Big Data and Tools for Structure, Function, and Genetics. Annu Rev Neurosci. 2020 07 08; 43:441-464. PMID: 32283996.
    Citations: 1     Fields:    Translation:HumansAnimals
  11. Siless V, Hubbard NA, Jones R, Wang J, Lo N, Bauer CCC, Goncalves M, Frosch I, Norton D, Vergara G, Conroy K, De Souza FV, Rosso IM, Wickham AH, Cosby EA, Pinaire M, Hirshfeld-Becker D, Pizzagalli DA, Henin A, Hofmann SG, Auerbach RP, Ghosh S, Gabrieli J, Whitfield-Gabrieli S, Yendiki A. Image acquisition and quality assurance in the Boston Adolescent Neuroimaging of Depression and Anxiety study. Neuroimage Clin. 2020; 26:102242. PMID: 32339824.
    Citations: 4     Fields:    Translation:Humans
  12. Okano K, Bauer CCC, Ghosh SS, Lee YJ, Melero H, de Los Angeles C, Nestor PG, Del Re EC, Northoff G, Whitfield-Gabrieli S, Niznikiewicz MA. Real-time fMRI feedback impacts brain activation, results in auditory hallucinations reduction: Part 1: Superior temporal gyrus -Preliminary evidence. Psychiatry Res. 2020 Feb 10; 286:112862. PMID: 32113035.
    Citations: 2     Fields:    
  13. Guell X, Anteraper SA, Ghosh SS, Gabrieli JDE, Schmahmann JD. Neurodevelopmental and Psychiatric Symptoms in Patients with a Cyst Compressing the Cerebellum: an Ongoing Enigma. Cerebellum. 2020 Feb; 19(1):16-29. PMID: 31321675.
    Citations: 4     Fields:    Translation:Humans
  14. Low DM, Bentley KH, Ghosh SS. Automated assessment of psychiatric disorders using speech: A systematic review. Laryngoscope Investig Otolaryngol. 2020 Feb; 5(1):96-116. PMID: 32128436.
    Citations: 15     
  15. Bauer CCC, Okano K, Ghosh SS, Lee YJ, Melero H, Angeles CL, Nestor PG, Del Re EC, Northoff G, Niznikiewicz MA, Whitfield-Gabrieli S. Real-time fMRI neurofeedback reduces auditory hallucinations and modulates resting state connectivity of involved brain regions: Part 2: Default mode network -preliminary evidence. Psychiatry Res. 2020 02; 284:112770. PMID: 32004893.
    Citations: 6     Fields:    Translation:Humans
  16. Wagley N, Perrachione TK, Ostrovskaya I, Ghosh SS, Saxler PK, Lymberis J, Wexler K, Gabrieli JDE, Kovelman I. Persistent Neurobehavioral Markers of Developmental Morphosyntax Errors in Adults. J Speech Lang Hear Res. 2019 12 18; 62(12):4497-4508. PMID: 31825709.
    Citations:    Fields:    Translation:Humans
  17. McClure P, Rho N, Lee JA, Kaczmarzyk JR, Zheng CY, Ghosh SS, Nielson DM, Thomas AG, Bandettini P, Pereira F. Knowing What You Know in Brain Segmentation Using Bayesian Deep Neural Networks. Front Neuroinform. 2019; 13:67. PMID: 31749693.
    Citations: 3     
  18. Quevedo K, Liu G, Teoh JY, Ghosh S, Zeffiro T, Ahrweiler N, Zhang N, Wedan R, Oh S, Guercio G, Paret C. Neurofeedback and neuroplasticity of visual self-processing in depressed and healthy adolescents: A preliminary study. Dev Cogn Neurosci. 2019 12; 40:100707. PMID: 31733523.
    Citations: 2     Fields:    Translation:Humans
  19. Sitek KR, Gulban OF, Calabrese E, Johnson GA, Lage-Castellanos A, Moerel M, Ghosh SS, De Martino F. Mapping the human subcortical auditory system using histology, postmortem MRI and in vivo MRI at 7T. Elife. 2019 08 01; 8. PMID: 31368891.
    Citations: 12     Fields:    Translation:Humans
  20. Kennedy DN, Abraham SA, Bates JF, Crowley A, Ghosh S, Gillespie T, Goncalves M, Grethe JS, Halchenko YO, Hanke M, Haselgrove C, Hodge SM, Jarecka D, Kaczmarzyk J, Keator DB, Meyer K, Martone ME, Padhy S, Poline JB, Preuss N, Sincomb T, Travers M. Everything Matters: The ReproNim Perspective on Reproducible Neuroimaging. Front Neuroinform. 2019; 13:1. PMID: 30792636.
    Citations: 12     
  21. Guell X, Goncalves M, Kaczmarzyk JR, Gabrieli JDE, Schmahmann JD, Ghosh SS. LittleBrain: A gradient-based tool for the topographical interpretation of cerebellar neuroimaging findings. PLoS One. 2019; 14(1):e0210028. PMID: 30650101.
    Citations: 9     Fields:    Translation:Humans
  22. Esteban O, Markiewicz CJ, Blair RW, Moodie CA, Isik AI, Erramuzpe A, Kent JD, Goncalves M, DuPre E, Snyder M, Oya H, Ghosh SS, Wright J, Durnez J, Poldrack RA, Gorgolewski KJ. fMRIPrep: a robust preprocessing pipeline for functional MRI. Nat Methods. 2019 01; 16(1):111-116. PMID: 30532080.
    Citations: 236     Fields:    Translation:Humans
  23. McClure P, Kaczmarzyk JR, Ghosh SS, Bandettini P, Zheng CY, Lee JA, Nielson D, Pereira F. Distributed Weight Consolidation: A Brain Segmentation Case Study. Adv Neural Inf Process Syst. 2018 Dec; 31:4093-4103. PMID: 34376963.
    Citations: 1     
  24. Guell X, Schmahmann JD, Gabrieli J, Ghosh SS. Functional gradients of the cerebellum. Elife. 2018 08 14; 7. PMID: 30106371.
    Citations: 67     Fields:    Translation:Humans
  25. Tarabichi O, Kozin ED, Kanumuri VV, Barber S, Ghosh S, Sitek KR, Reinshagen K, Herrmann B, Remenschneider AK, Lee DJ. Diffusion Tensor Imaging of Central Auditory Pathways in Patients with Sensorineural Hearing Loss: A Systematic Review. Otolaryngol Head Neck Surg. 2018 03; 158(3):432-442. PMID: 29112481.
    Citations: 9     Fields:    Translation:Humans
  26. Perrachione TK, Ghosh SS, Ostrovskaya I, Gabrieli JDE, Kovelman I. Phonological Working Memory for Words and Nonwords in Cerebral Cortex. J Speech Lang Hear Res. 2017 07 12; 60(7):1959-1979. PMID: 28631005.
    Citations: 14     Fields:    Translation:Humans
  27. Nenning KH, Liu H, Ghosh SS, Sabuncu MR, Schwartz E, Langs G. Diffeomorphic functional brain surface alignment: Functional demons. Neuroimage. 2017 08 01; 156:456-465. PMID: 28416451.
    Citations: 14     Fields:    Translation:Humans
  28. Gorgolewski KJ, Alfaro-Almagro F, Auer T, Bellec P, Capota M, Chakravarty MM, Churchill NW, Cohen AL, Craddock RC, Devenyi GA, Eklund A, Esteban O, Flandin G, Ghosh SS, Guntupalli JS, Jenkinson M, Keshavan A, Kiar G, Liem F, Raamana PR, Raffelt D, Steele CJ, Quirion PO, Smith RE, Strother SC, Varoquaux G, Wang Y, Yarkoni T, Poldrack RA. BIDS apps: Improving ease of use, accessibility, and reproducibility of neuroimaging data analysis methods. PLoS Comput Biol. 2017 03; 13(3):e1005209. PMID: 28278228.
    Citations: 54     Fields:    Translation:Humans
  29. Klein A, Ghosh SS, Bao FS, Giard J, Häme Y, Stavsky E, Lee N, Rossa B, Reuter M, Chaibub Neto E, Keshavan A. Mindboggling morphometry of human brains. PLoS Comput Biol. 2017 02; 13(2):e1005350. PMID: 28231282.
    Citations: 69     Fields:    Translation:Humans
  30. Ghosh SS, Poline JB, Keator DB, Halchenko YO, Thomas AG, Kessler DA, Kennedy DN. A very simple, re-executable neuroimaging publication. F1000Res. 2017; 6:124. PMID: 28781753.
    Citations: 6     Fields:    
  31. O'Connor D, Potler NV, Kovacs M, Xu T, Ai L, Pellman J, Vanderwal T, Parra LC, Cohen S, Ghosh S, Escalera J, Grant-Villegas N, Osman Y, Bui A, Craddock RC, Milham MP. The Healthy Brain Network Serial Scanning Initiative: a resource for evaluating inter-individual differences and their reliabilities across scan conditions and sessions. Gigascience. 2017 02 01; 6(2):1-14. PMID: 28369458.
    Citations: 22     Fields:    Translation:Humans
  32. Perrachione TK, Del Tufo SN, Winter R, Murtagh J, Cyr A, Chang P, Halverson K, Ghosh SS, Christodoulou JA, Gabrieli JDE. Dysfunction of Rapid Neural Adaptation in Dyslexia. Neuron. 2016 Dec 21; 92(6):1383-1397. PMID: 28009278.
    Citations: 24     Fields:    Translation:Humans
  33. Maumet C, Auer T, Bowring A, Chen G, Das S, Flandin G, Ghosh S, Glatard T, Gorgolewski KJ, Helmer KG, Jenkinson M, Keator DB, Nichols BN, Poline JB, Reynolds R, Sochat V, Turner J, Nichols TE. Sharing brain mapping statistical results with the neuroimaging data model. Sci Data. 2016 12 06; 3:160102. PMID: 27922621.
    Citations: 11     Fields:    Translation:Humans
  34. Margulies DS, Ghosh SS, Goulas A, Falkiewicz M, Huntenburg JM, Langs G, Bezgin G, Eickhoff SB, Castellanos FX, Petrides M, Jefferies E, Smallwood J. Situating the default-mode network along a principal gradient of macroscale cortical organization. Proc Natl Acad Sci U S A. 2016 11 01; 113(44):12574-12579. PMID: 27791099.
    Citations: 265     Fields:    Translation:HumansAnimals
  35. Gorgolewski KJ, Auer T, Calhoun VD, Craddock RC, Das S, Duff EP, Flandin G, Ghosh SS, Glatard T, Halchenko YO, Handwerker DA, Hanke M, Keator D, Li X, Michael Z, Maumet C, Nichols BN, Nichols TE, Pellman J, Poline JB, Rokem A, Schaefer G, Sochat V, Triplett W, Turner JA, Varoquaux G, Poldrack RA. The brain imaging data structure, a format for organizing and describing outputs of neuroimaging experiments. Sci Data. 2016 Jun 21; 3:160044. PMID: 27326542.
    Citations: 219     Fields:    Translation:Humans
  36. Sitek KR, Cai S, Beal DS, Perkell JS, Guenther FH, Ghosh SS. Decreased Cerebellar-Orbitofrontal Connectivity Correlates with Stuttering Severity: Whole-Brain Functional and Structural Connectivity Associations with Persistent Developmental Stuttering. Front Hum Neurosci. 2016; 10:190. PMID: 27199712.
    Citations: 9     
  37. Allen GI, Amoroso N, Anghel C, Balagurusamy V, Bare CJ, Beaton D, Bellotti R, Bennett DA, Boehme KL, Boutros PC, Caberlotto L, Caloian C, Campbell F, Chaibub Neto E, Chang YC, Chen B, Chen CY, Chien TY, Clark T, Das S, Davatzikos C, Deng J, Dillenberger D, Dobson RJ, Dong Q, Doshi J, Duma D, Errico R, Erus G, Everett E, Fardo DW, Friend SH, Fröhlich H, Gan J, St George-Hyslop P, Ghosh SS, Glaab E, Green RC, Guan Y, Hong MY, Huang C, Hwang J, Ibrahim J, Inglese P, Iyappan A, Jiang Q, Katsumata Y, Kauwe JS, Klein A, Kong D, Krause R, Lalonde E, Lauria M, Lee E, Lin X, Liu Z, Livingstone J, Logsdon BA, Lovestone S, Ma TW, Malhotra A, Mangravite LM, Maxwell TJ, Merrill E, Nagorski J, Namasivayam A, Narayan M, Naz M, Newhouse SJ, Norman TC, Nurtdinov RN, Oyang YJ, Pawitan Y, Peng S, Peters MA, Piccolo SR, Praveen P, Priami C, Sabelnykova VY, Senger P, Shen X, Simmons A, Sotiras A, Stolovitzky G, Tangaro S, Tateo A, Tung YA, Tustison NJ, Varol E, Vradenburg G, Weiner MW, Xiao G, Xie L, Xie Y, Xu J, Yang H, Zhan X, Zhou Y, Zhu F, Zhu H, Zhu S. Crowdsourced estimation of cognitive decline and resilience in Alzheimer's disease. Alzheimers Dement. 2016 06; 12(6):645-53. PMID: 27079753.
    Citations: 24     Fields:    Translation:Humans
  38. Christodoulou JA, Murtagh J, Cyr A, Perrachione TK, Chang P, Halverson K, Hook P, Yendiki A, Ghosh S, Gabrieli JDE. Relation of white-matter microstructure to reading ability and disability in beginning readers. Neuropsychology. 2017 Jul; 31(5):508-515. PMID: 26949926.
    Citations: 7     Fields:    Translation:Humans
  39. Ciccarelli G, Quatieri TF, Ghosh SS. Seventeenth Annual Conference of the International Speech Communication Association. Neurophysiological Vocal Source Modeling for Biomarkers of Disease. 2016.
  40. Langs G, Golland P, Ghosh SS. Predicting Activation Across Individuals with Resting-State Functional Connectivity Based Multi-Atlas Label Fusion. Med Image Comput Comput Assist Interv. 2015 Oct; 9350:313-320. PMID: 26855977.
    Citations: 15     Fields:    
  41. Whitfield-Gabrieli S, Ghosh SS, Nieto-Castanon A, Saygin Z, Doehrmann O, Chai XJ, Reynolds GO, Hofmann SG, Pollack MH, Gabrieli JD. Brain connectomics predict response to treatment in social anxiety disorder. Mol Psychiatry. 2016 May; 21(5):680-5. PMID: 26260493.
    Citations: 44     Fields:    Translation:Humans
  42. Gorgolewski KJ, Varoquaux G, Rivera G, Schwartz Y, Sochat VV, Ghosh SS, Maumet C, Nichols TE, Poline JB, Yarkoni T, Margulies DS, Poldrack RA. NeuroVault.org: A repository for sharing unthresholded statistical maps, parcellations, and atlases of the human brain. Neuroimage. 2016 Jan 01; 124(Pt B):1242-1244. PMID: 25869863.
    Citations: 31     Fields:    Translation:Humans
  43. Gorgolewski KJ, Varoquaux G, Rivera G, Schwarz Y, Ghosh SS, Maumet C, Sochat VV, Nichols TE, Poldrack RA, Poline JB, Yarkoni T, Margulies DS. NeuroVault.org: a web-based repository for collecting and sharing unthresholded statistical maps of the human brain. Front Neuroinform. 2015; 9:8. PMID: 25914639.
    Citations: 164     
  44. Gabrieli JDE, Ghosh SS, Whitfield-Gabrieli S. Prediction as a humanitarian and pragmatic contribution from human cognitive neuroscience. Neuron. 2015 Jan 07; 85(1):11-26. PMID: 25569345.
    Citations: 163     Fields:    Translation:Humans
  45. Williamson JR, Quatieri TF, Helfer BS, Perricone J, Ghosh SS, Ciccarelli G, Mehta DD. Sixteenth Annual Conference of the International Speech Communication Association. Segment-dependent dynamics in predicting Parkinson’s disease. 2015.
  46. Christodoulou JA, Del Tufo SN, Lymberis J, Saxler PK, Ghosh SS, Triantafyllou C, Whitfield-Gabrieli S, Gabrieli JD. Brain bases of reading fluency in typical reading and impaired fluency in dyslexia. PLoS One. 2014; 9(7):e100552. PMID: 25058010.
    Citations: 10     Fields:    Translation:Humans
  47. Stoeckel LE, Garrison KA, Ghosh S, Wighton P, Hanlon CA, Gilman JM, Greer S, Turk-Browne NB, deBettencourt MT, Scheinost D, Craddock C, Thompson T, Calderon V, Bauer CC, George M, Breiter HC, Whitfield-Gabrieli S, Gabrieli JD, LaConte SM, Hirshberg L, Brewer JA, Hampson M, Van Der Kouwe A, Mackey S, Evins AE. Optimizing real time fMRI neurofeedback for therapeutic discovery and development. Neuroimage Clin. 2014; 5:245-55. PMID: 25161891.
    Citations: 67     Fields:    Translation:Humans
  48. Cai S, Tourville JA, Beal DS, Perkell JS, Guenther FH, Ghosh SS. Diffusion imaging of cerebral white matter in persons who stutter: evidence for network-level anomalies. Front Hum Neurosci. 2014; 8:54. PMID: 24611042.
    Citations: 35     
  49. Cai S, Beal DS, Ghosh SS, Guenther FH, Perkell JS. Impaired timing adjustments in response to time-varying auditory perturbation during connected speech production in persons who stutter. Brain Lang. 2014 Feb; 129:24-9. PMID: 24486601.
    Citations: 24     Fields:    Translation:Humans
  50. Tustison NJ, Johnson HJ, Rohlfing T, Klein A, Ghosh SS, Ibanez L, Avants BB. Instrumentation bias in the use and evaluation of scientific software: recommendations for reproducible practices in the computational sciences. Front Neurosci. 2013; 7:162. PMID: 24058331.
    Citations: 11     
  51. Perrachione TK, Ghosh SS. Optimized design and analysis of sparse-sampling FMRI experiments. Front Neurosci. 2013; 7:55. PMID: 23616742.
    Citations: 29     
  52. Doehrmann O, Ghosh SS, Polli FE, Reynolds GO, Horn F, Keshavan A, Triantafyllou C, Saygin ZM, Whitfield-Gabrieli S, Hofmann SG, Pollack M, Gabrieli JD. Predicting treatment response in social anxiety disorder from functional magnetic resonance imaging. JAMA Psychiatry. 2013 Jan; 70(1):87-97. PMID: 22945462.
    Citations: 80     Fields:    Translation:Humans
  53. Hinds O, Thompson TW, Ghosh S, Yoo JJ, Whitfield-Gabrieli S, Triantafyllou C, Gabrieli JD. Roles of default-mode network and supplementary motor area in human vigilance performance: evidence from real-time fMRI. J Neurophysiol. 2013 Mar; 109(5):1250-8. PMID: 23236006.
    Citations: 27     Fields:    Translation:Humans
  54. Cai S, Beal DS, Ghosh SS, Tiede MK, Guenther FH, Perkell JS. Weak responses to auditory feedback perturbation during articulation in persons who stutter: evidence for abnormal auditory-motor transformation. PLoS One. 2012; 7(7):e41830. PMID: 22911857.
    Citations: 49     Fields:    Translation:Humans
  55. Ghosh SS, Klein A, Avants B, Millman KJ. Learning from open source software projects to improve scientific review. Front Comput Neurosci. 2012; 6:18. PMID: 22529798.
    Citations: 12     
  56. Poline JB, Breeze JL, Ghosh S, Gorgolewski K, Halchenko YO, Hanke M, Haselgrove C, Helmer KG, Keator DB, Marcus DS, Poldrack RA, Schwartz Y, Ashburner J, Kennedy DN. Data sharing in neuroimaging research. Front Neuroinform. 2012; 6:9. PMID: 22493576.
    Citations: 96     
  57. Cai S, Ghosh SS, Guenther FH, Perkell JS. Focal manipulations of formant trajectories reveal a role of auditory feedback in the online control of both within-syllable and between-syllable speech timing. J Neurosci. 2011 Nov 09; 31(45):16483-90. PMID: 22072698.
    Citations: 26     Fields:    Translation:Humans
  58. Gorgolewski K, Burns CD, Madison C, Clark D, Halchenko YO, Waskom ML, Ghosh SS. Nipype: a flexible, lightweight and extensible neuroimaging data processing framework in python. Front Neuroinform. 2011; 5:13. PMID: 21897815.
    Citations: 353     
  59. Silver AL, Nimkin K, Ashland JE, Ghosh SS, van der Kouwe AJ, Brigger MT, Hartnick CJ. Cine magnetic resonance imaging with simultaneous audio to evaluate pediatric velopharyngeal insufficiency. Arch Otolaryngol Head Neck Surg. 2011 Mar; 137(3):258-63. PMID: 21422310.
    Citations: 7     Fields:    Translation:Humans
  60. Golfinopoulos E, Tourville JA, Bohland JW, Ghosh SS, Nieto-Castanon A, Guenther FH. fMRI investigation of unexpected somatosensory feedback perturbation during speech. Neuroimage. 2011 Apr 01; 55(3):1324-38. PMID: 21195191.
    Citations: 50     Fields:    Translation:Humans
  61. Ghosh SS, Matthies ML, Maas E, Hanson A, Tiede M, Ménard L, Guenther FH, Lane H, Perkell JS. An investigation of the relation between sibilant production and somatosensory and auditory acuity. J Acoust Soc Am. 2010 Nov; 128(5):3079-87. PMID: 21110603.
    Citations: 19     Fields:    Translation:Humans
  62. Brunner J, Ghosh S, Hoole P, Matthies M, Tiede M, Perkell J. The influence of auditory acuity on acoustic variability and the use of motor equivalence during adaptation to a perturbation. J Speech Lang Hear Res. 2011 Jun; 54(3):727-39. PMID: 20966388.
    Citations: 5     Fields:    Translation:Humans
  63. Cai S, Ghosh SS, Guenther FH, Perkell JS. Adaptive auditory feedback control of the production of formant trajectories in the Mandarin triphthong /iau/ and its pattern of generalization. J Acoust Soc Am. 2010 Oct; 128(4):2033-48. PMID: 20968374.
    Citations: 26     Fields:    Translation:Humans
  64. Hinds O, Ghosh S, Thompson TW, Yoo JJ, Whitfield-Gabrieli S, Triantafyllou C, Gabrieli JD. Computing moment-to-moment BOLD activation for real-time neurofeedback. Neuroimage. 2011 Jan 01; 54(1):361-8. PMID: 20682350.
    Citations: 20     Fields:    Translation:HumansCells
  65. Ghosh SS, Kakunoori S, Augustinack J, Nieto-Castanon A, Kovelman I, Gaab N, Christodoulou JA, Triantafyllou C, Gabrieli JD, Fischl B. Evaluating the validity of volume-based and surface-based brain image registration for developmental cognitive neuroscience studies in children 4 to 11 years of age. Neuroimage. 2010 Oct 15; 53(1):85-93. PMID: 20621657.
    Citations: 108     Fields:    Translation:Humans
  66. Klein A, Ghosh SS, Avants B, Yeo BT, Fischl B, Ardekani B, Gee JC, Mann JJ, Parsey RV. Evaluation of volume-based and surface-based brain image registration methods. Neuroimage. 2010 May 15; 51(1):214-20. PMID: 20123029.
    Citations: 104     Fields:    Translation:Humans
  67. Balci SK, Sabuncu MR, Yoo J, Ghosh SS, Whitfield-Gabrieli S, Gabrieli JD, Golland P. Prediction of Successful Memory Encoding from fMRI Data. Med Image Comput Comput Assist Interv. 2008 Sep 01; 2008(11):97-104. PMID: 20401334.
    Citations: 6     Fields:    
  68. Ghosh SS, Tourville JA, Guenther FH. A neuroimaging study of premotor lateralization and cerebellar involvement in the production of phonemes and syllables. J Speech Lang Hear Res. 2008 Oct; 51(5):1183-202. PMID: 18664692.
    Citations: 62     Fields:    Translation:Humans
  69. Klein A, Mensh B, Ghosh S, Tourville J, Hirsch J. Mindboggle: automated brain labeling with multiple atlases. BMC Med Imaging. 2005 Oct 05; 5:7. PMID: 16202176.
    Citations: 23     Fields:    
  70. Guenther FH, Ghosh SS, Tourville JA. Neural modeling and imaging of the cortical interactions underlying syllable production. Brain Lang. 2006 Mar; 96(3):280-301. PMID: 16040108.
    Citations: 281     Fields:    Translation:HumansCells
  71. Guenther FH, Nieto-Castanon A, Ghosh SS, Tourville JA. Representation of sound categories in auditory cortical maps. J Speech Lang Hear Res. 2004 Feb; 47(1):46-57. PMID: 15072527.
    Citations: 41     Fields:    Translation:Humans
  72. Nieto-Castanon A, Ghosh SS, Tourville JA, Guenther FH. Region of interest based analysis of functional imaging data. Neuroimage. 2003 Aug; 19(4):1303-16. PMID: 12948689.
    Citations: 58     Fields:    Translation:Humans
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Funded by the NIH National Center for Advancing Translational Sciences through its Clinical and Translational Science Awards Program, grant number UL1TR002541.