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Stephen Farman Cauley, Ph.D.

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Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
  1. Conklin J, Tabari A, Longo MGF, Cobos CJ, Setsompop K, Cauley SF, Kirsch JE, Huang SY, Rapalino O, Gee MS, Caruso PJ. Evaluation of highly accelerated wave controlled aliasing in parallel imaging (Wave-CAIPI) susceptibility-weighted imaging in the non-sedated pediatric setting: a pilot study. Pediatr Radiol. 2022 Feb 04. PMID: 35119490.
    Citations:    Fields:    
  2. Li Z, Tian Q, Ngamsombat C, Cartmell S, Conklin J, Filho ALMG, Lo WC, Wang G, Ying K, Setsompop K, Fan Q, Bilgic B, Cauley S, Huang SY. High-fidelity fast volumetric brain MRI using synergistic wave-controlled aliasing in parallel imaging and a hybrid denoising generative adversarial network (HDnGAN). Med Phys. 2022 Feb; 49(2):1000-1014. PMID: 34961944.
    Citations:    Fields:    Translation:Humans
  3. Demir S, Clifford B, Lo WC, Tabari A, Goncalves Filho ALM, Lang M, Cauley SF, Setsompop K, Bilgic B, Lev MH, Schaefer PW, Rapalino O, Huang SY, Hilbert T, Feiweier T, Conklin J. Optimization of magnetization transfer contrast for EPI FLAIR brain imaging. Magn Reson Med. 2022 05; 87(5):2380-2387. PMID: 34985151.
    Citations:    Fields:    
  4. Clifford B, Conklin J, Huang SY, Feiweier T, Hosseini Z, Goncalves Filho ALM, Tabari A, Demir S, Lo WC, Longo MGF, Lev M, Schaefer P, Rapalino O, Setsompop K, Bilgic B, Cauley S. An artificial intelligence-accelerated 2-minute multi-shot echo planar imaging protocol for comprehensive high-quality clinical brain imaging. Magn Reson Med. 2022 05; 87(5):2453-2463. PMID: 34971463.
    Citations:    Fields:    
  5. Lang M, Cartmell S, Tabari A, Briggs D, Pianykh O, Kirsch J, Cauley S, Lo WC, Risacher S, Filho AG, Succi MD, Rapalino O, Schaefer P, Conklin J, Huang SY. Evaluation of the Aggregated Time Savings in Adopting Fast Brain MRI Techniques for Outpatient Brain MRI. Acad Radiol. 2021 Oct 08. PMID: 34635436.
    Citations:    Fields:    
  6. Srinivas SA, Cauley SF, Stockmann JP, Sappo CR, Vaughn CE, Wald LL, Grissom WA, Cooley CZ. External Dynamic InTerference Estimation and Removal (EDITER) for low field MRI. Magn Reson Med. 2022 02; 87(2):614-628. PMID: 34480778.
    Citations: 1     Fields:    
  7. Polak D, Splitthoff DN, Clifford B, Lo WC, Huang SY, Conklin J, Wald LL, Setsompop K, Cauley S. Scout accelerated motion estimation and reduction (SAMER). Magn Reson Med. 2022 01; 87(1):163-178. PMID: 34390505.
    Citations:    Fields:    
  8. Tabari A, Conklin J, Figueiro Longo MG, Jaimes C, Setsompop K, Cauley SF, Kirsch JE, Huang SY, Rapalino O, Gee MS, Caruso PJ. Comparison of ultrafast wave-controlled aliasing in parallel imaging (CAIPI) magnetization-prepared rapid acquisition gradient echo (MP-RAGE) and standard MP-RAGE in non-sedated children: initial clinical experience. Pediatr Radiol. 2021 Oct; 51(11):2009-2017. PMID: 34268599.
    Citations: 1     Fields:    Translation:Humans
  9. Ngamsombat C, Gonçalves Filho ALM, Longo MGF, Cauley SF, Setsompop K, Kirsch JE, Tian Q, Fan Q, Polak D, Liu W, Lo WC, Gilberto González R, Schaefer PW, Rapalino O, Conklin J, Huang SY. Evaluation of Ultrafast Wave-Controlled Aliasing in Parallel Imaging 3D-FLAIR in the Visualization and Volumetric Estimation of Cerebral White Matter Lesions. AJNR Am J Neuroradiol. 2021 09; 42(9):1584-1590. PMID: 34244127.
    Citations: 1     Fields:    Translation:Humans
  10. Goncalves Filho ALM, Longo MGF, Conklin J, Cauley SF, Polak D, Liu W, Splitthoff DN, Lo WC, Kirsch JE, Setsompop K, Schaefer PW, Huang SY, Rapalino O. MRI Highly Accelerated Wave-CAIPI T1-SPACE versus Standard T1-SPACE to detect brain gadolinium-enhancing lesions at 3T. J Neuroimaging. 2021 09; 31(5):893-901. PMID: 34081374.
    Citations: 1     Fields:    Translation:Humans
  11. Kim D, Cauley SF, Nayak KS, Leahy RM, Haldar JP. Region-optimized virtual (ROVir) coils: Localization and/or suppression of spatial regions using sensor-domain beamforming. Magn Reson Med. 2021 07; 86(1):197-212. PMID: 33594732.
    Citations: 1     Fields:    
  12. Cooley CZ, McDaniel PC, Stockmann JP, Srinivas SA, Cauley SF, Sliwiak M, Sappo CR, Vaughn CF, Guerin B, Rosen MS, Lev MH, Wald LL. A portable scanner for magnetic resonance imaging of the brain. Nat Biomed Eng. 2021 03; 5(3):229-239. PMID: 33230306.
    Citations: 9     Fields:    Translation:Humans
  13. Goncalves Filho ALM, Conklin J, Longo MGF, Cauley SF, Polak D, Liu W, Splitthoff DN, Lo WC, Kirsch JE, Setsompop K, Schaefer PW, Huang SY, Rapalino O. Accelerated Post-contrast Wave-CAIPI T1 SPACE Achieves Equivalent Diagnostic Performance Compared With Standard T1 SPACE for the Detection of Brain Metastases in Clinical 3T MRI. Front Neurol. 2020; 11:587327. PMID: 33193054.
    Citations: 2     
  14. Longo MGF, Conklin J, Cauley SF, Setsompop K, Tian Q, Polak D, Polackal M, Splitthoff D, Liu W, González RG, Schaefer PW, Kirsch JE, Rapalino O, Huang SY. Evaluation of Ultrafast Wave-CAIPI MPRAGE for Visual Grading and Automated Measurement of Brain Tissue Volume. AJNR Am J Neuroradiol. 2020 08; 41(8):1388-1396. PMID: 32732274.
    Citations: 9     Fields:    Translation:Humans
  15. Polak D, Cauley S, Bilgic B, Gong E, Bachert P, Adalsteinsson E, Setsompop K. Joint multi-contrast variational network reconstruction (jVN) with application to rapid 2D and 3D imaging. Magn Reson Med. 2020 09; 84(3):1456-1469. PMID: 32129529.
    Citations: 3     Fields:    
  16. Conklin J, Longo MGF, Cauley SF, Setsompop K, González RG, Schaefer PW, Kirsch JE, Rapalino O, Huang SY. Validation of Highly Accelerated Wave-CAIPI SWI Compared with Conventional SWI and T2*-Weighted Gradient Recalled-Echo for Routine Clinical Brain MRI at 3T. AJNR Am J Neuroradiol. 2019 12; 40(12):2073-2080. PMID: 31727749.
    Citations: 13     Fields:    Translation:Humans
  17. Bilgic B, Chatnuntawech I, Manhard MK, Tian Q, Liao C, Iyer SS, Cauley SF, Huang SY, Polimeni JR, Wald LL, Setsompop K. Highly accelerated multishot echo planar imaging through synergistic machine learning and joint reconstruction. Magn Reson Med. 2019 10; 82(4):1343-1358. PMID: 31106902.
    Citations: 12     Fields:    Translation:Humans
  18. Haskell MW, Cauley SF, Bilgic B, Hossbach J, Splitthoff DN, Pfeuffer J, Setsompop K, Wald LL. Network Accelerated Motion Estimation and Reduction (NAMER): Convolutional neural network guided retrospective motion correction using a separable motion model. Magn Reson Med. 2019 10; 82(4):1452-1461. PMID: 31045278.
    Citations: 7     Fields:    Translation:Humans
  19. Polak D, Cauley S, Huang SY, Longo MG, Conklin J, Bilgic B, Ohringer N, Raithel E, Bachert P, Wald LL, Setsompop K. Highly-accelerated volumetric brain examination using optimized wave-CAIPI encoding. J Magn Reson Imaging. 2019 09; 50(3):961-974. PMID: 30734388.
    Citations: 9     Fields:    Translation:Humans
  20. Haskell MW, Cauley SF, Wald LL. TArgeted Motion Estimation and Reduction (TAMER): Data Consistency Based Motion Mitigation for MRI Using a Reduced Model Joint Optimization. IEEE Trans Med Imaging. 2018 05; 37(5):1253-1265. PMID: 29727288.
    Citations: 16     Fields:    Translation:Humans
  21. Wang F, Bilgic B, Dong Z, Manhard MK, Ohringer N, Zhao B, Haskell M, Cauley SF, Fan Q, Witzel T, Adalsteinsson E, Wald LL, Setsompop K. Motion-robust sub-millimeter isotropic diffusion imaging through motion corrected generalized slice dithered enhanced resolution (MC-gSlider) acquisition. Magn Reson Med. 2018 11; 80(5):1891-1906. PMID: 29607548.
    Citations: 13     Fields:    Translation:Humans
  22. Zhu B, Liu JZ, Cauley SF, Rosen BR, Rosen MS. Image reconstruction by domain-transform manifold learning. Nature. 2018 03 21; 555(7697):487-492. PMID: 29565357.
    Citations: 194     Fields:    
  23. Cooley CZ, Haskell MW, Cauley SF, Sappo C, Lapierre CD, Ha CG, Stockmann JP, Wald LL. Design of sparse Halbach magnet arrays for portable MRI using a genetic algorithm. IEEE Trans Magn. 2018 Jan; 54(1). PMID: 29749974.
    Citations: 9     
  24. Mason EE, Cooley CZ, Cauley SF, Griswold MA, Conolly SM, Wald LL. Design analysis of an MPI human functional brain scanner. Int J Magn Part Imaging. 2017; 3(1). PMID: 28752130.
    Citations: 13     
  25. Setsompop K, Fan Q, Stockmann J, Bilgic B, Huang S, Cauley SF, Nummenmaa A, Wang F, Rathi Y, Witzel T, Wald LL. High-resolution in vivo diffusion imaging of the human brain with generalized slice dithered enhanced resolution: Simultaneous multislice (gSlider-SMS). Magn Reson Med. 2018 Jan; 79(1):141-151. PMID: 28261904.
    Citations: 49     Fields:    Translation:Humans
  26. Polak D, Setsompop K, Cauley SF, Gagoski BA, Bhat H, Maier F, Bachert P, Wald LL, Bilgic B. Wave-CAIPI for highly accelerated MP-RAGE imaging. Magn Reson Med. 2018 Jan; 79(1):401-406. PMID: 28220617.
    Citations: 15     Fields:    Translation:Humans
  27. Jiang Y, Ma D, Bhat H, Ye H, Cauley SF, Wald LL, Setsompop K, Griswold MA. Use of pattern recognition for unaliasing simultaneously acquired slices in simultaneous multislice MR fingerprinting. Magn Reson Med. 2017 11; 78(5):1870-1876. PMID: 28019022.
    Citations: 15     Fields:    Translation:Humans
  28. Cauley SF, Setsompop K, Bilgic B, Bhat H, Gagoski B, Wald LL. Autocalibrated wave-CAIPI reconstruction; Joint optimization of k-space trajectory and parallel imaging reconstruction. Magn Reson Med. 2017 09; 78(3):1093-1099. PMID: 27770457.
    Citations: 19     Fields:    Translation:Humans
  29. Mekkaoui C, Reese TG, Jackowski MP, Cauley SF, Setsompop K, Bhat H, Sosnovik DE. Diffusion Tractography of the Entire Left Ventricle by Using Free-breathing Accelerated Simultaneous Multisection Imaging. Radiology. 2017 03; 282(3):850-856. PMID: 27681278.
    Citations: 13     Fields:    Translation:Humans
  30. Chatnuntawech I, McDaniel P, Cauley SF, Gagoski BA, Langkammer C, Martin A, Grant PE, Wald LL, Setsompop K, Adalsteinsson E, Bilgic B. Single-step quantitative susceptibility mapping with variational penalties. NMR Biomed. 2017 Apr; 30(4). PMID: 27332141.
    Citations: 15     Fields:    Translation:Humans
  31. Ye H, Cauley SF, Gagoski B, Bilgic B, Ma D, Jiang Y, Du YP, Griswold MA, Wald LL, Setsompop K. Simultaneous multislice magnetic resonance fingerprinting (SMS-MRF) with direct-spiral slice-GRAPPA (ds-SG) reconstruction. Magn Reson Med. 2017 05; 77(5):1966-1974. PMID: 27220881.
    Citations: 16     Fields:    Translation:Humans
  32. Zhao B, Setsompop K, Ye H, Cauley SF, Wald LL. Maximum Likelihood Reconstruction for Magnetic Resonance Fingerprinting. IEEE Trans Med Imaging. 2016 08; 35(8):1812-23. PMID: 26915119.
    Citations: 38     Fields:    
  33. Fan Q, Witzel T, Nummenmaa A, Van Dijk KRA, Van Horn JD, Drews MK, Somerville LH, Sheridan MA, Santillana RM, Snyder J, Hedden T, Shaw EE, Hollinshead MO, Renvall V, Zanzonico R, Keil B, Cauley S, Polimeni JR, Tisdall D, Buckner RL, Wedeen VJ, Wald LL, Toga AW, Rosen BR. MGH-USC Human Connectome Project datasets with ultra-high b-value diffusion MRI. Neuroimage. 2016 Jan 01; 124(Pt B):1108-1114. PMID: 26364861.
    Citations: 62     Fields:    Translation:Humans
  34. Eichner C, Cauley SF, Cohen-Adad J, Möller HE, Turner R, Setsompop K, Wald LL. Real diffusion-weighted MRI enabling true signal averaging and increased diffusion contrast. Neuroimage. 2015 Nov 15; 122:373-84. PMID: 26241680.
    Citations: 34     Fields:    Translation:HumansCells
  35. Ye H, Ma D, Jiang Y, Cauley SF, Du Y, Wald LL, Griswold MA, Setsompop K. Accelerating magnetic resonance fingerprinting (MRF) using t-blipped simultaneous multislice (SMS) acquisition. Magn Reson Med. 2016 May; 75(5):2078-85. PMID: 26059430.
    Citations: 24     Fields:    Translation:Humans
  36. Fan Q, Nummenmaa A, Witzel T, Zanzonico R, Keil B, Cauley S, Polimeni JR, Tisdall D, Van Dijk KR, Buckner RL, Wedeen VJ, Rosen BR, Wald LL. Investigating the capability to resolve complex white matter structures with high b-value diffusion magnetic resonance imaging on the MGH-USC Connectom scanner. Brain Connect. 2014 Nov; 4(9):718-26. PMID: 25287963.
    Citations: 19     Fields:    Translation:Humans
  37. Cauley SF, Setsompop K, Ma D, Jiang Y, Ye H, Adalsteinsson E, Griswold MA, Wald LL. Fast group matching for MR fingerprinting reconstruction. Magn Reson Med. 2015 Aug; 74(2):523-8. PMID: 25168690.
    Citations: 35     Fields:    Translation:Humans
  38. Chatnuntawech I, Gagoski B, Bilgic B, Cauley SF, Setsompop K, Adalsteinsson E. Accelerated 1 H MRSI using randomly undersampled spiral-based k-space trajectories. Magn Reson Med. 2015 Jul; 74(1):13-24. PMID: 25079076.
    Citations: 13     Fields:    
  39. Bilgic B, Gagoski BA, Cauley SF, Fan AP, Polimeni JR, Grant PE, Wald LL, Setsompop K. Wave-CAIPI for highly accelerated 3D imaging. Magn Reson Med. 2015 Jun; 73(6):2152-62. PMID: 24986223.
    Citations: 65     Fields:    Translation:Humans
  40. Cauley SF, Xi Y, Bilgic B, Xia J, Adalsteinsson E, Balakrishnan V, Wald LL, Setsompop K. Fast reconstruction for multichannel compressed sensing using a hierarchically semiseparable solver. Magn Reson Med. 2015 Mar; 73(3):1034-40. PMID: 24639238.
    Citations: 8     Fields:    Translation:Humans
  41. Bilgic B, Fan AP, Polimeni JR, Cauley SF, Bianciardi M, Adalsteinsson E, Wald LL, Setsompop K. Fast quantitative susceptibility mapping with L1-regularization and automatic parameter selection. Magn Reson Med. 2014 Nov; 72(5):1444-59. PMID: 24259479.
    Citations: 40     Fields:    Translation:Humans
  42. Bilgic B, Chatnuntawech I, Fan AP, Setsompop K, Cauley SF, Wald LL, Adalsteinsson E. Fast image reconstruction with L2-regularization. J Magn Reson Imaging. 2014 Jul; 40(1):181-91. PMID: 24395184.
    Citations: 31     Fields:    Translation:Humans
  43. Eichner C, Jafari-Khouzani K, Cauley S, Bhat H, Polaskova P, Andronesi OC, Rapalino O, Turner R, Wald LL, Stufflebeam S, Setsompop K. Slice accelerated gradient-echo spin-echo dynamic susceptibility contrast imaging with blipped CAIPI for increased slice coverage. Magn Reson Med. 2014 Sep; 72(3):770-8. PMID: 24285593.
    Citations: 22     Fields:    Translation:Humans
  44. Cauley SF, Polimeni JR, Bhat H, Wald LL, Setsompop K. Interslice leakage artifact reduction technique for simultaneous multislice acquisitions. Magn Reson Med. 2014 Jul; 72(1):93-102. PMID: 23963964.
    Citations: 81     Fields:    Translation:Humans
  45. Bilgic B, Chatnuntawech I, Setsompop K, Cauley SF, Yendiki A, Wald LL, Adalsteinsson E. Fast dictionary-based reconstruction for diffusion spectrum imaging. IEEE Trans Med Imaging. 2013 Nov; 32(11):2022-33. PMID: 23846466.
    Citations: 8     Fields:    Translation:Humans
  46. Setsompop K, Kimmlingen R, Eberlein E, Witzel T, Cohen-Adad J, McNab JA, Keil B, Tisdall MD, Hoecht P, Dietz P, Cauley SF, Tountcheva V, Matschl V, Lenz VH, Heberlein K, Potthast A, Thein H, Van Horn J, Toga A, Schmitt F, Lehne D, Rosen BR, Wedeen V, Wald LL. Pushing the limits of in vivo diffusion MRI for the Human Connectome Project. Neuroimage. 2013 Oct 15; 80:220-33. PMID: 23707579.
    Citations: 194     Fields:    Translation:HumansAnimals
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Funded by the NIH National Center for Advancing Translational Sciences through its Clinical and Translational Science Awards Program, grant number UL1TR002541.