Harvard Catalyst Profiles

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Lipeng Ning, Ph.D.


The research activities and funding listed below are automatically derived from NIH ExPORTER and other sources, which might result in incorrect or missing items. Faculty can login to make corrections and additions.
  1. R21MH126396 (NING, LIPENG) Feb 1, 2021 - Jan 31, 2023
    Real-time visualization and precision targeting in transcranial magnetic stimulation
    Role: Principal Investigator
  2. K01MH117346 (NING, LIPENG) Sep 1, 2019 - Aug 31, 2024
    Joint structural-and-functional MRI analysis for predicting electroconvulsive therapy response in major depressive disorder
    Role: Principal Investigator
  3. R21MH116352 (NING, LIPENG) Sep 24, 2018 - Jun 30, 2021
    Multimodal brain-connectivity biomarkers for profiling heterogeneity in early psychosis
    Role: Principal Investigator
  4. R21MH115280 (NING, LIPENG) Dec 11, 2017 - Nov 30, 2019
    Personalized target selection for TMS therapy using functional vs. structural connectivity MRI
    Role: Principal Investigator

Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
  1. Ji Y, Hoge WS, Gagoski B, Westin CF, Rathi Y, Ning L. Accelerating joint relaxation-diffusion MRI by integrating time division multiplexing and simultaneous multi-slice (TDM-SMS) strategies. Magn Reson Med. 2022 06; 87(6):2697-2709. PMID: 35092081; PMCID: PMC9310145.
    Citations:    Fields:    Translation:HumansCells
  2. Ning L, Rathi Y, Barbour T, Makris N, Camprodon JA. White matter markers and predictors for subject-specific rTMS response in major depressive disorder. J Affect Disord. 2022 02 15; 299:207-214. PMID: 34875281; PMCID: PMC8766915.
    Citations:    Fields:    Translation:Humans
  3. Xu G, Rathi Y, Camprodon JA, Cao H, Ning L. Rapid whole-brain electric field mapping in transcranial magnetic stimulation using deep learning. PLoS One. 2021; 16(7):e0254588. PMID: 34329328.
    Citations:    Fields:    Translation:Humans
  4. Ji Y, Gagoski B, Hoge WS, Rathi Y, Ning L. Accelerated diffusion and relaxation-diffusion MRI using time-division multiplexing EPI. Magn Reson Med. 2021 11; 86(5):2528-2541. PMID: 34196032.
    Citations: 1     Fields:    Translation:HumansCells
  5. Zhang F, Breger A, Cho KIK, Ning L, Westin CF, O'Donnell LJ, Pasternak O. Deep learning based segmentation of brain tissue from diffusion MRI. Neuroimage. 2021 06; 233:117934. PMID: 33737246.
    Citations: 5     Fields:    Translation:Humans
  6. Ning L, Szczepankiewicz F, Nilsson M, Rathi Y, Westin CF. Probing tissue microstructure by diffusion skewness tensor imaging. Sci Rep. 2021 01 08; 11(1):135. PMID: 33420140.
    Citations: 2     Fields:    Translation:Humans
  7. Baxi M, Di Biase MA, Lyall AE, Cetin-Karayumak S, Seitz J, Ning L, Makris N, Rosene D, Kubicki M, Rathi Y. Quantifying Genetic and Environmental Influence on Gray Matter Microstructure Using Diffusion MRI. Cereb Cortex. 2020 11 03; 30(12):6191-6205. PMID: 32676671.
    Citations: 2     Fields:    Translation:Humans
  8. Wu W, McAnulty G, Hamoda HM, Sarill K, Karmacharya S, Gagoski B, Ning L, Grant PE, Shenton ME, Waber DP, Makris N, Rathi Y. Detecting microstructural white matter abnormalities of frontal pathways in children with ADHD using advanced diffusion models. Brain Imaging Behav. 2020 Aug; 14(4):981-997. PMID: 31041662.
    Citations: 8     Fields:    Translation:Humans
  9. Ning L, Bonet-Carne E, Grussu F, Sepehrband F, Kaden E, Veraart J, Blumberg SB, Khoo CS, Palombo M, Kokkinos I, Alexander DC, Coll-Font J, Scherrer B, Warfield SK, Karayumak SC, Rathi Y, Koppers S, Weninger L, Ebert J, Merhof D, Moyer D, Pietsch M, Christiaens D, Gomes Teixeira RA, Tournier JD, Schilling KG, Huo Y, Nath V, Hansen C, Blaber J, Landman BA, Zhylka A, Pluim JPW, Parker G, Rudrapatna U, Evans J, Charron C, Jones DK, Tax CMW. Cross-scanner and cross-protocol multi-shell diffusion MRI data harmonization: Algorithms and results. Neuroimage. 2020 11 01; 221:117128. PMID: 32673745.
    Citations: 12     Fields:    Translation:Humans
  10. Ramos-Llordén G, Ning L, Liao C, Mukhometzianov R, Michailovich O, Setsompop K, Rathi Y. High-fidelity, accelerated whole-brain submillimeter in vivo diffusion MRI using gSlider-spherical ridgelets (gSlider-SR). Magn Reson Med. 2020 10; 84(4):1781-1795. PMID: 32125020; PMCID: PMC9149785.
    Citations: 7     Fields:    Translation:Humans
  11. Ning L, Gagoski B, Szczepankiewicz F, Westin CF, Rathi Y. Joint RElaxation-Diffusion Imaging Moments to Probe Neurite Microstructure. IEEE Trans Med Imaging. 2020 03; 39(3):668-677. PMID: 31398113.
    Citations: 10     Fields:    Translation:HumansCells
  12. Ning L. Smooth interpolation of covariance matrices and brain network estimation: Part II. IEEE Trans Automat Contr. 2020 May; 65(5):1901-1910. PMID: 33935294.
  13. Zhang F, Ning L, O'Donnell LJ, Pasternak O. MK-curve - Characterizing the relation between mean kurtosis and alterations in the diffusion MRI signal. Neuroimage. 2019 08 01; 196:68-80. PMID: 30978492.
    Citations: 5     Fields:    Translation:Humans
  14. Tax CM, Grussu F, Kaden E, Ning L, Rudrapatna U, John Evans C, St-Jean S, Leemans A, Koppers S, Merhof D, Ghosh A, Tanno R, Alexander DC, Zappalà S, Charron C, Kusmia S, Linden DE, Jones DK, Veraart J. Cross-scanner and cross-protocol diffusion MRI data harmonisation: A benchmark database and evaluation of algorithms. Neuroimage. 2019 07 15; 195:285-299. PMID: 30716459; PMCID: PMC6556555.
    Citations: 21     Fields:    Translation:Humans
  15. Ning L. Smooth Interpolation of Covariance Matrices and Brain Network Estimation. IEEE Trans Automat Contr. 2019 Aug; 64(8):3184-3193. PMID: 33907337.
    Citations: 1     
  16. Ning L, Makris N, Camprodon JA, Rathi Y. Limits and reproducibility of resting-state functional MRI definition of DLPFC targets for neuromodulation. Brain Stimul. 2019 Jan - Feb; 12(1):129-138. PMID: 30344110.
    Citations: 10     Fields:    Translation:Humans
  17. Cetin Karayumak S, Bouix S, Ning L, James A, Crow T, Shenton M, Kubicki M, Rathi Y. Retrospective harmonization of multi-site diffusion MRI data acquired with different acquisition parameters. Neuroimage. 2019 01 01; 184:180-200. PMID: 30205206; PMCID: PMC6230479.
    Citations: 41     Fields:    Translation:Humans
  18. Tang Y, Zhang X, Sheng J, Zhang X, Zhang J, Xu J, Zhu Y, Wang J, Zhang T, Tong S, Ning L, Liu M, Li Y, Wang J. Elevated hippocampal choline level is associated with altered functional connectivity in females with major depressive disorder: A pilot study. Psychiatry Res Neuroimaging. 2018 08 30; 278:48-55. PMID: 29880254.
    Citations: 2     Fields:    Translation:Humans
  19. Karmacharya S, Gagoski B, Ning L, Vyas R, Cheng HH, Soul J, Newberger JW, Shenton ME, Rathi Y, Grant PE. Advanced diffusion imaging for assessing normal white matter development in neonates and characterizing aberrant development in congenital heart disease. Neuroimage Clin. 2018; 19:360-373. PMID: 30013919.
    Citations: 9     Fields:    Translation:Humans
  20. Ning L, Nilsson M, Lasic S, Westin CF, Rathi Y. Cumulant expansions for measuring water exchange using diffusion MRI. J Chem Phys. 2018 Feb 21; 148(7):074109. PMID: 29471656.
    Citations: 9     Fields:    
  21. Mirzaalian H, Ning L, Savadjiev P, Pasternak O, Bouix S, Michailovich O, Karmacharya S, Grant G, Marx CE, Morey RA, Flashman LA, George MS, McAllister TW, Andaluz N, Shutter L, Coimbra R, Zafonte RD, Coleman MJ, Kubicki M, Westin CF, Stein MB, Shenton ME, Rathi Y. Multi-site harmonization of diffusion MRI data in a registration framework. Brain Imaging Behav. 2018 02; 12(1):284-295. PMID: 28176263.
    Citations: 24     Fields:    Translation:Humans
  22. Zhang F, Wu W, Ning L, McAnulty G, Waber D, Gagoski B, Sarill K, Hamoda HM, Song Y, Cai W, Rathi Y, O'Donnell LJ. Suprathreshold fiber cluster statistics: Leveraging white matter geometry to enhance tractography statistical analysis. Neuroimage. 2018 05 01; 171:341-354. PMID: 29337279.
    Citations: 9     Fields:    Translation:Humans
  23. Ning L, Rathi Y. A Dynamic Regression Approach for Frequency-Domain Partial Coherence and Causality Analysis of Functional Brain Networks. IEEE Trans Med Imaging. 2018 09; 37(9):1957-1969. PMID: 28816657.
    Citations: 2     Fields:    Translation:Humans
  24. Liao R, Ning L, Chen Z, Rigolo L, Gong S, Pasternak O, Golby AJ, Rathi Y, O'Donnell LJ. Performance of unscented Kalman filter tractography in edema: Analysis of the two-tensor model. Neuroimage Clin. 2017; 15:819-831. PMID: 28725549; PMCID: PMC5506885.
    Citations: 14     Fields:    Translation:HumansCells
  25. Chen Y, Georgiou TT, Ning L, Tannenbaum A. Matricial Wasserstein-1 Distance. IEEE Control Syst Lett. 2017 Jul; 1(1):14-19. PMID: 29152609; PMCID: PMC5687101.
    Citations: 1     
  26. Ning L, Özarslan E, Westin CF, Rathi Y. Precise Inference and Characterization of Structural Organization (PICASO) of tissue from molecular diffusion. Neuroimage. 2017 02 01; 146:452-473. PMID: 27751940.
    Citations: 6     Fields:    Translation:HumansCells
  27. Ning L, Setsompop K, Westin CF, Rathi Y. New insights about time-varying diffusivity and its estimation from diffusion MRI. Magn Reson Med. 2017 08; 78(2):763-774. PMID: 27611013.
    Citations: 8     Fields:    Translation:Humans
  28. Ning L, Setsompop K, Michailovich O, Makris N, Shenton ME, Westin CF, Rathi Y. Corrigendum to "A joint compressed-sensing and super-resolution approach for very high-resolution diffusion imaging". Neuroimage. 2016 11 15; 142:696. PMID: 27490271.
    Citations:    Fields:    
  29. Mirzaalian H, Ning L, Savadjiev P, Pasternak O, Bouix S, Michailovich O, Grant G, Marx CE, Morey RA, Flashman LA, George MS, McAllister TW, Andaluz N, Shutter L, Coimbra R, Zafonte RD, Coleman MJ, Kubicki M, Westin CF, Stein MB, Shenton ME, Rathi Y. Inter-site and inter-scanner diffusion MRI data harmonization. Neuroimage. 2016 07 15; 135:311-23. PMID: 27138209.
    Citations: 50     Fields:    Translation:Humans
  30. Ning L, Westin CF, Rathi Y. Estimation of Bounded and Unbounded Trajectories in Diffusion MRI. Front Neurosci. 2016; 10:129. PMID: 27064745; PMCID: PMC4814562.
    Citations: 2     
  31. Ning L, Laun F, Gur Y, DiBella EV, Deslauriers-Gauthier S, Megherbi T, Ghosh A, Zucchelli M, Menegaz G, Fick R, St-Jean S, Paquette M, Aranda R, Descoteaux M, Deriche R, O'Donnell L, Rathi Y. Sparse Reconstruction Challenge for diffusion MRI: Validation on a physical phantom to determine which acquisition scheme and analysis method to use? Med Image Anal. 2015 Dec; 26(1):316-31. PMID: 26606457.
    Citations: 32     Fields:    Translation:Humans
  32. Ning L, Setsompop K, Michailovich O, Makris N, Shenton ME, Westin CF, Rathi Y. A joint compressed-sensing and super-resolution approach for very high-resolution diffusion imaging. Neuroimage. 2016 Jan 15; 125:386-400. PMID: 26505296.
    Citations: 18     Fields:    Translation:Humans
  33. Ning L, Georgiou TT, Tannenbaum A, Boyd SP. Linear Models Based on Noisy Data and the Frisch Scheme. SIAM Rev Soc Ind Appl Math. 2015; 57(2):167-197. PMID: 27168672; PMCID: PMC4856315.
  34. Ning L, Westin CF, Rathi Y. Estimating diffusion propagator and its moments using directional radial basis functions. IEEE Trans Med Imaging. 2015 Oct; 34(10):2058-78. PMID: 25838518.
    Citations: 18     Fields:    Translation:Humans
  35. Ning L, Setsompop K, Michailovich O, Makris N, Westin CF, Rathi Y. A Compressed-Sensing Approach for Super-Resolution Reconstruction of Diffusion MRI. Inf Process Med Imaging. 2015; 24:57-68. PMID: 26221667.
    Citations: 3     Fields:    Translation:HumansCells
  36. Ning L, Georgiou TT, Tannenbaum A. On Matrix-Valued Monge-Kantorovich Optimal Mass Transport. IEEE Trans Automat Contr. 2015 Feb; 60(2):373-382. PMID: 26997667; PMCID: PMC4798256.
    Citations: 4     
  37. Rathi Y, Ning L, Michailovich O, Liao H, Gagoski B, Grant PE, Shenton ME, Stern R, Westin CF, Lin A. Maximum entropy estimation of glutamate and glutamine in MR spectroscopic imaging. Med Image Comput Comput Assist Interv. 2014; 17(Pt 2):749-56. PMID: 25485447.
    Citations:    Fields:    Translation:Humans
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Funded by the NIH National Center for Advancing Translational Sciences through its Clinical and Translational Science Awards Program, grant number UL1TR002541.