Harvard Catalyst Profiles

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Anna Gustafson Green


The research activities and funding listed below are automatically derived from NIH ExPORTER and other sources, which might result in incorrect or missing items. Faculty can login to make corrections and additions.
  1. F32AI161793 (GREEN, ANNA GUSTAFSON) Sep 14, 2021 - Sep 13, 2023
    Integrating protein structure and genomic data to predict antibiotic resistance in Mycobacterium tuberculosis
    Role: Principal Investigator

Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
  1. Green AG, Yoon CH, Chen ML, Ektefaie Y, Fina M, Freschi L, Gröschel MI, Kohane I, Beam A, Farhat M. A convolutional neural network highlights mutations relevant to antimicrobial resistance in Mycobacterium tuberculosis. Nat Commun. 2022 07 02; 13(1):3817. PMID: 35780211; PMCID: PMC9250494.
    Citations:    Fields:    Translation:HumansCells
  2. Ding D, Green AG, Wang B, Lite TV, Weinstein EN, Marks DS, Laub MT. Co-evolution of interacting proteins through non-contacting and non-specific mutations. Nat Ecol Evol. 2022 05; 6(5):590-603. PMID: 35361892; PMCID: PMC9090974.
    Citations: 1     Fields:    Translation:Cells
  3. Artzi L, Alon A, Brock KP, Green AG, Tam A, Ramírez-Guadiana FH, Marks D, Kruse A, Rudner DZ. Dormant spores sense amino acids through the B subunits of their germination receptors. Nat Commun. 2021 11 25; 12(1):6842. PMID: 34824238.
    Citations: 4     Fields:    Translation:Cells
  4. Green AG, Elhabashy H, Brock KP, Maddamsetti R, Kohlbacher O, Marks DS. Large-scale discovery of protein interactions at residue resolution using co-evolution calculated from genomic sequences. Nat Commun. 2021 03 02; 12(1):1396. PMID: 33654096.
    Citations: 12     Fields:    Translation:Cells
  5. Sjodt M, Rohs PDA, Gilman MSA, Erlandson SC, Zheng S, Green AG, Brock KP, Taguchi A, Kahne D, Walker S, Marks DS, Rudner DZ, Bernhardt TG, Kruse AC. Structural coordination of polymerization and crosslinking by a SEDS-bPBP peptidoglycan synthase complex. Nat Microbiol. 2020 06; 5(6):813-820. PMID: 32152588.
    Citations: 27     Fields:    Translation:Cells
  6. Nicoludis JM, Green AG, Walujkar S, May EJ, Sotomayor M, Marks DS, Gaudet R. Interaction specificity of clustered protocadherins inferred from sequence covariation and structural analysis. Proc Natl Acad Sci U S A. 2019 09 03; 116(36):17825-17830. PMID: 31431536.
    Citations: 12     Fields:    Translation:HumansCells
  7. Hopf TA, Green AG, Schubert B, Mersmann S, Schärfe CPI, Ingraham JB, Toth-Petroczy A, Brock K, Riesselman AJ, Palmedo P, Kang C, Sheridan R, Draizen EJ, Dallago C, Sander C, Marks DS. The EVcouplings Python framework for coevolutionary sequence analysis. Bioinformatics. 2019 05 01; 35(9):1582-1584. PMID: 30304492.
    Citations: 42     Fields:    
  8. Sjodt M, Brock K, Dobihal G, Rohs PDA, Green AG, Hopf TA, Meeske AJ, Srisuknimit V, Kahne D, Walker S, Marks DS, Bernhardt TG, Rudner DZ, Kruse AC. Structure of the peptidoglycan polymerase RodA resolved by evolutionary coupling analysis. Nature. 2018 04 05; 556(7699):118-121. PMID: 29590088.
    Citations: 41     Fields:    Translation:Cells
  9. Maddamsetti R, Hatcher PJ, Green AG, Williams BL, Marks DS, Lenski RE. Core Genes Evolve Rapidly in the Long-Term Evolution Experiment with Escherichia coli. Genome Biol Evol. 2017 Apr 01; 9(4):1072-1083. PMID: 28379360; PMCID: PMC5406848.
    Citations: 17     Fields:    
  10. Grad YH, Harris SR, Kirkcaldy RD, Green AG, Marks DS, Bentley SD, Trees D, Lipsitch M. Genomic Epidemiology of Gonococcal Resistance to Extended-Spectrum Cephalosporins, Macrolides, and Fluoroquinolones in the United States, 2000-2013. J Infect Dis. 2016 11 15; 214(10):1579-1587. PMID: 27638945; PMCID: PMC5091375.
    Citations: 105     Fields:    Translation:HumansCells
  11. Nicoludis JM, Vogt BE, Green AG, Schärfe CP, Marks DS, Gaudet R. Antiparallel protocadherin homodimers use distinct affinity- and specificity-mediating regions in cadherin repeats 1-4. Elife. 2016 07 29; 5. PMID: 27472898; PMCID: PMC5001838.
    Citations: 29     Fields:    Translation:HumansCells
  12. Hopf TA, Schärfe CP, Rodrigues JP, Green AG, Kohlbacher O, Sander C, Bonvin AM, Marks DS. Sequence co-evolution gives 3D contacts and structures of protein complexes. Elife. 2014 Sep 25; 3. PMID: 25255213.
    Citations: 195     Fields:    Translation:Cells
  13. Butzin NC, Lapierre P, Green AG, Swithers KS, Gogarten JP, Noll KM. Reconstructed ancestral Myo-inositol-3-phosphate synthases indicate that ancestors of the Thermococcales and Thermotoga species were more thermophilic than their descendants. PLoS One. 2013; 8(12):e84300. PMID: 24391933.
    Citations: 12     Fields:    Translation:Cells
  14. Zhaxybayeva O, Swithers KS, Foght J, Green AG, Bruce D, Detter C, Han S, Teshima H, Han J, Woyke T, Pitluck S, Nolan M, Ivanova N, Pati A, Land ML, Dlutek M, Doolittle WF, Noll KM, Nesbø CL. Genome sequence of the mesophilic Thermotogales bacterium Mesotoga prima MesG1.Ag.4.2 reveals the largest Thermotogales genome to date. Genome Biol Evol. 2012; 4(8):700-8. PMID: 22798451.
    Citations: 5     Fields:    Translation:Cells
  15. Swithers KS, Fournier GP, Green AG, Gogarten JP, Lapierre P. Reassessment of the lineage fusion hypothesis for the origin of double membrane bacteria. PLoS One. 2011; 6(8):e23774. PMID: 21876769.
    Citations: 2     Fields:    Translation:Cells
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Funded by the NIH National Center for Advancing Translational Sciences through its Clinical and Translational Science Awards Program, grant number UL1TR002541.