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Magali Soumillon, Ph.D.

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Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
  1. Mocciaro A, Roth TL, Bennett HM, Soumillon M, Shah A, Hiatt J, Chapman K, Marson A, Lavieu G. Light-activated cell identification and sorting (LACIS) for selection of edited clones on a nanofluidic device. Commun Biol. 2018; 1:41. PMID: 30271925.
    Citations: 2     
  2. Kilens S, Meistermann D, Moreno D, Chariau C, Gaignerie A, Reignier A, Lelièvre Y, Casanova M, Vallot C, Nedellec S, Flippe L, Firmin J, Song J, Charpentier E, Lammers J, Donnart A, Marec N, Deb W, Bihouée A, Le Caignec C, Pecqueur C, Redon R, Barrière P, Bourdon J, Pasque V, Soumillon M, Mikkelsen TS, Rougeulle C, Fréour T, David L. Parallel derivation of isogenic human primed and naive induced pluripotent stem cells. Nat Commun. 2018 01 24; 9(1):360. PMID: 29367672.
    Citations: 18     Fields:    Translation:HumansAnimalsCells
  3. Xiong Y, Soumillon M, Wu J, Hansen J, Hu B, van Hasselt JGC, Jayaraman G, Lim R, Bouhaddou M, Ornelas L, Bochicchio J, Lenaeus L, Stocksdale J, Shim J, Gomez E, Sareen D, Svendsen C, Thompson LM, Mahajan M, Iyengar R, Sobie EA, Azeloglu EU, Birtwistle MR. A Comparison of mRNA Sequencing with Random Primed and 3'-Directed Libraries. Sci Rep. 2017 11 07; 7(1):14626. PMID: 29116112.
    Citations: 5     Fields:    Translation:HumansCells
  4. Semrau S, Goldmann JE, Soumillon M, Mikkelsen TS, Jaenisch R, van Oudenaarden A. Dynamics of lineage commitment revealed by single-cell transcriptomics of differentiating embryonic stem cells. Nat Commun. 2017 10 23; 8(1):1096. PMID: 29061959.
    Citations: 21     Fields:    Translation:AnimalsCells
  5. Kadoki M, Patil A, Thaiss CC, Brooks DJ, Pandey S, Deep D, Alvarez D, von Andrian UH, Wagers AJ, Nakai K, Mikkelsen TS, Soumillon M, Chevrier N. Organism-Level Analysis of Vaccination Reveals Networks of Protection across Tissues. Cell. 2017 Oct 05; 171(2):398-413.e21. PMID: 28942919.
    Citations: 17     Fields:    Translation:AnimalsCells
  6. Lutas A, Lahmann C, Soumillon M, Yellen G. The leak channel NALCN controls tonic firing and glycolytic sensitivity of substantia nigra pars reticulata neurons. Elife. 2016 05 13; 5. PMID: 27177420.
    Citations: 12     Fields:    Translation:AnimalsCells
  7. Verrier ER, Colpitts CC, Bach C, Heydmann L, Weiss A, Renaud M, Durand SC, Habersetzer F, Durantel D, Abou-Jaoudé G, López Ledesma MM, Felmlee DJ, Soumillon M, Croonenborghs T, Pochet N, Nassal M, Schuster C, Brino L, Sureau C, Zeisel MB, Baumert TF. A targeted functional RNA interference screen uncovers glypican 5 as an entry factor for hepatitis B and D viruses. Hepatology. 2016 Jan; 63(1):35-48. PMID: 26224662.
    Citations: 32     Fields:    Translation:HumansCells
  8. Cacchiarelli D, Trapnell C, Ziller MJ, Soumillon M, Cesana M, Karnik R, Donaghey J, Smith ZD, Ratanasirintrawoot S, Zhang X, Ho Sui SJ, Wu Z, Akopian V, Gifford CA, Doench J, Rinn JL, Daley GQ, Meissner A, Lander ES, Mikkelsen TS. Integrative Analyses of Human Reprogramming Reveal Dynamic Nature of Induced Pluripotency. Cell. 2015 Jul 16; 162(2):412-424. PMID: 26186193.
    Citations: 57     Fields:    Translation:HumansCells
  9. Anahtar MN, Byrne EH, Doherty KE, Bowman BA, Yamamoto HS, Soumillon M, Padavattan N, Ismail N, Moodley A, Sabatini ME, Ghebremichael MS, Nusbaum C, Huttenhower C, Virgin HW, Ndung'u T, Dong KL, Walker BD, Fichorova RN, Kwon DS. Cervicovaginal bacteria are a major modulator of host inflammatory responses in the female genital tract. Immunity. 2015 May 19; 42(5):965-76. PMID: 25992865.
    Citations: 127     Fields:    Translation:HumansCells
  10. Necsulea A, Soumillon M, Warnefors M, Liechti A, Daish T, Zeller U, Baker JC, Grützner F, Kaessmann H. The evolution of lncRNA repertoires and expression patterns in tetrapods. Nature. 2014 Jan 30; 505(7485):635-40. PMID: 24463510.
    Citations: 311     Fields:    Translation:HumansAnimalsCells
  11. Soumillon M. [Transcriptome complexity in germ cells]. Med Sci (Paris). 2013 Dec; 29(12):1077-9. PMID: 24356132.
    Citations:    Fields:    Translation:HumansAnimalsCells
  12. Soumillon M, Necsulea A, Weier M, Brawand D, Zhang X, Gu H, Barthès P, Kokkinaki M, Nef S, Gnirke A, Dym M, de Massy B, Mikkelsen TS, Kaessmann H. Cellular source and mechanisms of high transcriptome complexity in the mammalian testis. Cell Rep. 2013 Jun 27; 3(6):2179-90. PMID: 23791531.
    Citations: 132     Fields:    Translation:HumansAnimalsCells
  13. Meunier J, Lemoine F, Soumillon M, Liechti A, Weier M, Guschanski K, Hu H, Khaitovich P, Kaessmann H. Birth and expression evolution of mammalian microRNA genes. Genome Res. 2013 Jan; 23(1):34-45. PMID: 23034410.
    Citations: 114     Fields:    Translation:HumansAnimalsCells
  14. Julien P, Brawand D, Soumillon M, Necsulea A, Liechti A, Schütz F, Daish T, Grützner F, Kaessmann H. Mechanisms and evolutionary patterns of mammalian and avian dosage compensation. PLoS Biol. 2012; 10(5):e1001328. PMID: 22615540.
    Citations: 71     Fields:    Translation:AnimalsCells
  15. Brawand D, Soumillon M, Necsulea A, Julien P, Csárdi G, Harrigan P, Weier M, Liechti A, Aximu-Petri A, Kircher M, Albert FW, Zeller U, Khaitovich P, Grützner F, Bergmann S, Nielsen R, Pääbo S, Kaessmann H. The evolution of gene expression levels in mammalian organs. Nature. 2011 Oct 19; 478(7369):343-8. PMID: 22012392.
    Citations: 433     Fields:    Translation:HumansAnimalsCells
  16. Goffard A, Sané F, Soumillon M, Hober D. Specificity of the coxsackievirus B4 VP4 capsid protein investigated in silico. Discov Med. 2011 Aug; 12(63):153-8. PMID: 21878192.
    Citations: 1     Fields:    Translation:HumansCells
  17. Sauter P, Chehadeh W, Lobert PE, Lazrek M, Goffard A, Soumillon M, Caloone D, Vantyghem MC, Weill J, Fajardy I, Alm G, Lucas B, Hober D. A part of the VP4 capsid protein exhibited by coxsackievirus B4 E2 is the target of antibodies contained in plasma from patients with type 1 diabetes. J Med Virol. 2008 May; 80(5):866-78. PMID: 18366069.
    Citations: 9     Fields:    Translation:HumansCells
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Funded by the NIH National Center for Advancing Translational Sciences through its Clinical and Translational Science Awards Program, grant number UL1TR002541.