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Kyu Ha Lee, Ph.D.

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The research activities and funding listed below are automatically derived from NIH ExPORTER and other sources, which might result in incorrect or missing items. Faculty can login to make corrections and additions.
  1. R01GM126257 (STARR, JACQUELINE R; LEE, KYU HA) May 1, 2021 - Feb 28, 2025
    Bayesian multivariate 3D spatial modeling for microbiome image analysis
    Role: Principal Investigator
  2. R03DE027486 (LEE, KYU HA) Sep 1, 2018 - Aug 31, 2021
    Multivariate Bayesian variable selection for high-dimensional oral microbiome data
    Role: Principal Investigator
  3. R21DE026872 (STARR, JACQUELINE R; LEE, KYU HA) Aug 1, 2018 - Jul 31, 2021
    Bayesian multivariate image analysis for studying oral microbiome biogeography
    Role: Principal Investigator

Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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PMC Citations indicate the number of times the publication was cited by articles in PubMed Central, and the Altmetric score represents citations in news articles and social media. (Note that publications are often cited in additional ways that are not shown here.) Fields are based on how the National Library of Medicine (NLM) classifies the publication's journal and might not represent the specific topic of the publication. Translation tags are based on the publication type and the MeSH terms NLM assigns to the publication. Some publications (especially newer ones and publications not in PubMed) might not yet be assigned Field or Translation tags.) Click a Field or Translation tag to filter the publications.
  1. Li J, Li Y, Ivey KL, Wang DD, Wilkinson JE, Franke A, Lee KH, Chan A, Huttenhower C, Hu FB, Rimm EB, Sun Q. Interplay between diet and gut microbiome, and circulating concentrations of trimethylamine N-oxide: findings from a longitudinal cohort of US men. Gut. 2022 Apr; 71(4):724-733. PMID: 33926968.
    Citations: 6     Fields:    
  2. Li Y, Seo S, Lee KH. Bayesian analysis of grouped survival data with adaptive time partition. J Stat Comput Simul. 2021; 14(91):2937-2952. View Publication.
  3. Lee KS, Talenfeld AD, Browne WF, Holzwanger DJ, Harnain C, Kesselman A, Pua BB. Role of interventional radiology in the treatment of COVID-19 patients: Early experience from an epicenter. Clin Imaging. 2021 Mar; 71:143-146. PMID: 33259979.
    Citations: 1     Fields:    Translation:HumansCells
  4. Lee KH, Coull BA, Moscicki AB, Paster BJ, Starr JR. Bayesian variable selection for multivariate zero-inflated models: Application to microbiome count data. Biostatistics. 2020 07 01; 21(3):499-517. PMID: 30590511.
    Citations: 2     Fields:    Translation:Humans
  5. Goldstein JM, Valido A, Lewandowski JP, Walker RG, Mills MJ, Messemer KA, Besseling P, Lee KH, Wattrus SJ, Cho M, Lee RT, Wagers AJ. Variation in zygotic CRISPR/Cas9 gene editing outcomes generates novel reporter and deletion alleles at the Gdf11 locus. Sci Rep. 2019 12 09; 9(1):18613. PMID: 31819086.
    Citations:    Fields:    Translation:AnimalsCells
  6. Kim JH, Pegoraro AF, Das A, Koehler SA, Ujwary SA, Lan B, Mitchel JA, Atia L, He S, Wang K, Bi D, Zaman MH, Park JA, Butler JP, Lee KH, Starr JR, Fredberg JJ. Unjamming and collective migration in MCF10A breast cancer cell lines. Biochem Biophys Res Commun. 2020 01 15; 521(3):706-715. PMID: 31699371.
    Citations: 10     Fields:    Translation:HumansCells
  7. Alvares D, Haneuse S, Lee C, Lee KH. SemiCompRisks: An R Package for the Analysis of Independent and Cluster-correlated Semi-competing Risks Data. R J. 2019 Jun; 11(1):376-400. PMID: 33604061.
  8. Green DR, Schulte F, Lee KH, Pugach MK, Hardt M, Bidlack FB. Mapping the Tooth Enamel Proteome and Amelogenin Phosphorylation Onto Mineralizing Porcine Tooth Crowns. Front Physiol. 2019; 10:925. PMID: 31417410.
    Citations: 5     
  9. Bassir SH, El Kholy K, Chen CY, Lee KH, Intini G. Outcome of early dental implant placement versus other dental implant placement protocols: A systematic review and meta-analysis. J Periodontol. 2019 05; 90(5):493-506. PMID: 30395355.
    Citations: 13     Fields:    
  10. Koch GK, Hamilton A, Wang K, Herschdorfer L, Lee KH, Gallucci GO, Friedland B. Dimensional accuracy of cone beam CT with varying angulation of the jaw to the X-ray beam. Dentomaxillofac Radiol. 2019 May; 48(4):20180319. PMID: 30407848.
    Citations:    Fields:    Translation:Humans
  11. Liu SH, Bobb JF, Lee KH, Gennings C, Claus Henn B, Bellinger D, Austin C, Schnaas L, Tellez-Rojo MM, Hu H, Wright RO, Arora M, Coull BA. Lagged kernel machine regression for identifying time windows of susceptibility to exposures of complex mixtures. Biostatistics. 2018 07 01; 19(3):325-341. PMID: 28968676.
    Citations: 19     Fields:    Translation:HumansPHPublic Health
  12. Starr JR, Huang Y, Lee KH, Murphy CM, Moscicki AB, Shiboski CH, Ryder MI, Yao TJ, Faller LL, Van Dyke RB, Paster BJ. Oral microbiota in youth with perinatally acquired HIV infection. Microbiome. 2018 05 31; 6(1):100. PMID: 29855347.
    Citations: 13     Fields:    Translation:HumansCells
  13. Atia L, Bi D, Sharma Y, Mitchel JA, Gweon B, Koehler S, DeCamp SJ, Lan B, Kim JH, Hirsch R, Pegoraro AF, Lee KH, Starr JR, Weitz DA, Martin AC, Park JA, Butler JP, Fredberg JJ. Geometric constraints during epithelial jamming. Nat Phys. 2018 Jun; 14:613-620. PMID: 30151030.
    Citations: 43     
  14. Abreu MHNG, Resende VLS, Lee KH, Matta-Machado ATGD, Starr JR. Regional differences in infection control conditions in a sample of primary health care services in Brazil. Cad Saude Publica. 2017 Nov 21; 33(11):e00072416. PMID: 29166477.
    Citations: 1     Fields:    Translation:HumansPHPublic Health
  15. Lee KH, Rondeau V, Haneuse S. Accelerated failure time models for semi-competing risks data in the presence of complex censoring. Biometrics. 2017 12; 73(4):1401-1412. PMID: 28395116.
    Citations: 3     Fields:    Translation:Humans
  16. Lee KH, Chakraborty S, Sun J. Variable selection for high-dimensional genomic data with censored outcomes using group lasso prior. Comput Stat Data Anal. 2017. View Publication.
  17. Lee KH, Dominici F, Schrag D, Haneuse S. Hierarchical models for semi-competing risks data with application to quality of end-of-life care for pancreatic cancer. J Am Stat Assoc. 2016; 111(515):1075-1095. PMID: 28303074.
    Citations: 9     
  18. Lee KH, Tadesse MG, Baccarelli AA, Schwartz J, Coull BA. Multivariate Bayesian variable selection exploiting dependence structure among outcomes: Application to air pollution effects on DNA methylation. Biometrics. 2017 03; 73(1):232-241. PMID: 27377873.
    Citations: 3     Fields:    Translation:HumansCellsPHPublic Health
  19. Abreu MH, Lee KH, Luquetti DV, Starr JR. Temporal trend in the reported birth prevalence of cleft lip and/or cleft palate in Brazil, 2000 to 2013. Birth Defects Res A Clin Mol Teratol. 2016 Sep; 106(9):789-92. PMID: 27256471.
    Citations: 4     Fields:    Translation:Humans
  20. Haneuse S, Lee KH. Semi-Competing Risks Data Analysis: Accounting for Death as a Competing Risk When the Outcome of Interest Is Nonterminal. Circ Cardiovasc Qual Outcomes. 2016 05; 9(3):322-31. PMID: 27072677.
    Citations: 19     Fields:    Translation:Humans
  21. Tanuma J, Lee KH, Haneuse S, Matsumoto S, Nguyen DT, Nguyen DT, Do CD, Pham TT, Nguyen KV, Oka S. Incidence of AIDS-Defining Opportunistic Infections and Mortality during Antiretroviral Therapy in a Cohort of Adult HIV-Infected Individuals in Hanoi, 2007-2014. PLoS One. 2016; 11(3):e0150781. PMID: 26939050.
    Citations: 7     Fields:    Translation:Humans
  22. Lee KH, Tadesse MG, Coull BA, Starr JR. mBvs: R-package for Bayesian variable selection methods for multivariate data. 2015. View Publication.
  23. Lee KH, Haneuse S, Schrag D, Dominici F. Bayesian Semi-parametric Analysis of Semi-competing Risks Data: Investigating Hospital Readmission after a Pancreatic Cancer Diagnosis. J R Stat Soc Ser C Appl Stat. 2015 02 01; 64(2):253-273. PMID: 25977592.
    Citations: 23     
  24. Lee KH, Chakraborty S, Sun J. Survival prediction and variable selection with simultaneous shrinkage and grouping priors. Stat Anal Data Min. 2015; 8(2):114-127. View Publication.
  25. Lee KH, Lee C, Haneuse S. SemiCompRisks: R-package for hierarchical models for parametric and semi-parametric analyses of semi-competing risks data. 2013. View Publication.
  26. Lee KH, Chakraborty S, Sun J. psbcGroup: R-package for penalized parametric and semi-parametric Bayesian survival models with shrinkage and grouping priors. 2013. View Publication.
  27. Lee KH, Chakraborty S, Sun J. Bayesian variable selection in semiparametric proportional hazards model for high dimensional survival data. Int J Biostat. 2011; 7(1):1-32. View Publication.
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Funded by the NIH National Center for Advancing Translational Sciences through its Clinical and Translational Science Awards Program, grant number UL1TR002541.