Prabu JR, Thamotharan S, Khanduja JS, Chandra NR, Muniyappa K, Vijayan M
Crystallographic and modelling studies on Mycobacterium tuberculosis RuvA Additional role of RuvB-binding domain and inter species variability. Biochim Biophys Acta. 2009 Jul; 1794(7):1001-9.
Crystallographic and modelling studies on Mycobacterium tuberculosis RuvA Additional role of RuvB-binding domain and inter species variability.
Mycobacterium tuberculosis RuvA induces two distinct types of structural distortions between the homologous and heterologous Holliday junctions. Biochemistry. 2009 Jan 13; 48(1):27-40.
Mycobacterium tuberculosis RuvA induces two distinct types of structural distortions between the homologous and heterologous Holliday junctions.
Rossi F, Khanduja JS, Bortoluzzi A, Houghton J, Sander P, Güthlein C, Davis EO, Springer B, Böttger EC, Relini A, Penco A, Muniyappa K, Rizzi M
The biological and structural characterization of Mycobacterium tuberculosis UvrA provides novel insights into its mechanism of action. Nucleic Acids Res. 2011 Sep 01; 39(16):7316-28.
The biological and structural characterization of Mycobacterium tuberculosis UvrA provides novel insights into its mechanism of action.
David Wesley Gaiser Professor of Biological Chemistry and Molecular Pharmacology
Khanduja JS, Joh RI, Perez MM, Paulo JA, Palmieri CM, Zhang J, Gulka AOD, Haas W, Gygi SP, Motamedi M
RNA quality control factors nucleate Clr4/SUV39H and trigger constitutive heterochromatin assembly. Cell. 2024 Jun 20; 187(13):3262-3283.e23.
RNA quality control factors nucleate Clr4/SUV39H and trigger constitutive heterochromatin assembly.
Protocol for development and use of spike-in control for chromatin immunoprecipitation of chromatin-binding proteins in Schizosaccharomyces pombe. STAR Protoc. 2025 Sep 19; 6(3):104007.
Protocol for development and use of spike-in control for chromatin immunoprecipitation of chromatin-binding proteins in Schizosaccharomyces pombe.
Protocol for chromatin immunoprecipitation of chromatin-binding proteins in Schizosaccharomyces pombe using a dual-crosslinking approach. STAR Protoc. 2025 Mar 21; 6(1):103695.
Protocol for chromatin immunoprecipitation of chromatin-binding proteins in Schizosaccharomyces pombe using a dual-crosslinking approach.
bioRxiv : the preprint server for biology
Protocol for the development and use of spike-in control for chromatin immunoprecipitation (ChIP) of chromatin-binding proteins. bioRxiv. 2025 May 16.
Protocol for the development and use of spike-in control for chromatin immunoprecipitation (ChIP) of chromatin-binding proteins.
Mazumder A, Cooper J, Goksal C, Khanduja JS, Joh RI, Groos JJ, Brockhausen RYJ, Kanoh J, Motamedi M, Finkelstein IJ, Al-Sady B, Braun S
Discrete Subdomains Establish Epigenetic Diversity in Subtelomeric Heterochromatin. bioRxiv. 2025 Sep 25.
Discrete Subdomains Establish Epigenetic Diversity in Subtelomeric Heterochromatin.
Thakur RS, Basavaraju S, Khanduja JS, Muniyappa K, Nagaraju G
Mycobacterium tuberculosis RecG protein but not RuvAB or RecA protein is efficient at remodeling the stalled replication forks: implications for multiple mechanisms of replication restart in mycobacteria. J Biol Chem. 2015 Oct 02; 290(40):24119-39.
Mycobacterium tuberculosis RecG protein but not RuvAB or RecA protein is efficient at remodeling the stalled replication forks: implications for multiple mechanisms of replication restart in mycobacteria.
Khanduja JS, Calvo IA, Joh RI, Hill IT, Motamedi M
Nuclear Noncoding RNAs and Genome Stability. Mol Cell. 2016 07 07; 63(1):7-20.
Nuclear Noncoding RNAs and Genome Stability.
Joh RI, Khanduja JS, Calvo IA, Mistry M, Palmieri CM, Savol AJ, Ho Sui SJ, Sadreyev RI, Aryee MJ, Motamedi M
Survival in Quiescence Requires the Euchromatic Deployment of Clr4/SUV39H by Argonaute-Associated Small RNAs. Mol Cell. 2016 12 15; 64(6):1088-1101.
Survival in Quiescence Requires the Euchromatic Deployment of Clr4/SUV39H by Argonaute-Associated Small RNAs.
Prabu JR, Thamotharan S, Khanduja JS, Alipio EZ, Kim CY, Waldo GS, Terwilliger TC, Segelke B, Lekin T, Toppani D, Hung LW, Yu M, Bursey E, Muniyappa K, Chandra NR, Vijayan M
Acta crystallographica. Section F, Structural biology and crystallization communications
Structure of Mycobacterium tuberculosis RuvA, a protein involved in recombination. Acta Crystallogr Sect F Struct Biol Cryst Commun. 2006 Aug 01; 62(Pt 8):731-4.
Acta Crystallogr Sect F Struct Biol Cryst Commun
Structure of Mycobacterium tuberculosis RuvA, a protein involved in recombination.
Singh P, Patil KN, Khanduja JS, Kumar PS, Williams A, Rossi F, Rizzi M, Davis EO, Muniyappa K
Mycobacterium tuberculosis UvrD1 and UvrA proteins suppress DNA strand exchange promoted by cognate and noncognate RecA proteins. Biochemistry. 2010 Jun 15; 49(23):4872-83.
Mycobacterium tuberculosis UvrD1 and UvrA proteins suppress DNA strand exchange promoted by cognate and noncognate RecA proteins.
Functional analysis of DNA replication fork reversal catalyzed by Mycobacterium tuberculosis RuvAB proteins. J Biol Chem. 2012 Jan 06; 287(2):1345-60.
Functional analysis of DNA replication fork reversal catalyzed by Mycobacterium tuberculosis RuvAB proteins.