Khanduja, Jasbeer
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full name: Jasbeer Singh Khanduja, Ph.D.
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selected publications: Authorship 475855
selected publications: Authorship 199506
selected publications: Authorship 416303
selected publications: Authorship 276361
research areas: Schizosaccharomyces pombe Proteins
research areas: Schizosaccharomyces
research areas: Chromatin Immunoprecipitation
research areas: Heterochromatin
research areas: Chromatin
mailing address: 149 13th Street
middle name or initial: Singh
positions: Instructor in Medicine
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Crystallographic and modelling studies on Mycobacterium tuberculosis RuvA Additional role of RuvB-binding domain and inter species variability.
PubMed Identifier: 19374958
author list: Prabu JR, Thamotharan S, Khanduja JS, Chandra NR, Muniyappa K, Vijayan M
published in: Biochimica et biophysica acta
information resource reference: Crystallographic and modelling studies on Mycobacterium tuberculosis RuvA Additional role of RuvB-binding domain and inter species variability. Biochim Biophys Acta. 2009 Jul; 1794(7):1001-9.
journal title abbreviation: Biochim Biophys Acta
publication date: 2009-04-15T00:00:00
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Mycobacterium tuberculosis RuvA induces two distinct types of structural distortions between the homologous and heterologous Holliday junctions.
PubMed Identifier: 19072585
author list: Khanduja JS, Tripathi P, Muniyappa K
published in: Biochemistry
information resource reference: Mycobacterium tuberculosis RuvA induces two distinct types of structural distortions between the homologous and heterologous Holliday junctions. Biochemistry. 2009 Jan 13; 48(1):27-40.
journal title abbreviation: Biochemistry
publication date: 2009-01-13T00:00:00
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The biological and structural characterization of Mycobacterium tuberculosis UvrA provides novel insights into its mechanism of action.
PubMed Identifier: 21622956
author list: Rossi F, Khanduja JS, Bortoluzzi A, Houghton J, Sander P, Güthlein C, Davis EO, Springer B, Böttger EC, Relini A, Penco A, Muniyappa K, Rizzi M
published in: Nucleic acids research
information resource reference: The biological and structural characterization of Mycobacterium tuberculosis UvrA provides novel insights into its mechanism of action. Nucleic Acids Res. 2011 Sep 01; 39(16):7316-28.
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Chromatin
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Chromatin Immunoprecipitation
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MGH Cancer Center Research
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Schizosaccharomyces pombe Proteins
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Schizosaccharomyces
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Heterochromatin
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number of authors: 150
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Cell Biology
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Genetics
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Medicine
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Pathology
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Brigham and Women's Hospital
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Harvard Medical School
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Massachusetts General Hospital
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Paulo, Joao
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Kingston, Robert
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Struhl, Kevin
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Motamedi, Mo
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Moazed, Danesh
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Gygi, Steven
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Sadreyev, Ruslan
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Winston, Fred
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linked author: Khanduja, Jasbeer
linked information resource: Functional analysis of DNA replication fork reversal catalyzed by Mycobacterium tuberculosis RuvAB proteins.

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linked author: Khanduja, Jasbeer
linked information resource: RNA quality control factors nucleate Clr4/SUV39H and trigger constitutive heterochromatin assembly.

RNA quality control factors nucleate Clr4/SUV39H and trigger constitutive heterochromatin assembly.
PubMed Identifier: 38815580
author list: Khanduja JS, Joh RI, Perez MM, Paulo JA, Palmieri CM, Zhang J, Gulka AOD, Haas W, Gygi SP, Motamedi M
published in: Cell
information resource reference: RNA quality control factors nucleate Clr4/SUV39H and trigger constitutive heterochromatin assembly. Cell. 2024 Jun 20; 187(13):3262-3283.e23.
journal title abbreviation: Cell
publication date: 2024-05-29T00:00:00
year: 2024
type: Academic Article
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David Wesley Gaiser Professor of Biological Chemistry and Molecular Pharmacology
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Authorship 199506
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linked author: Khanduja, Jasbeer
linked information resource: Crystallographic and modelling studies on Mycobacterium tuberculosis RuvA Additional role of RuvB-binding domain and inter species variability.

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Authorship 275417
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linked information resource: The biological and structural characterization of Mycobacterium tuberculosis UvrA provides novel insights into its mechanism of action.

Authorship 1809831
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linked author: Khanduja, Jasbeer
linked information resource: Protocol for development and use of spike-in control for chromatin immunoprecipitation of chromatin-binding proteins in Schizosaccharomyces pombe.

Authorship 1821186
type: Authorship
author rank in publication: 1
linked author: Khanduja, Jasbeer
linked information resource: Protocol for chromatin immunoprecipitation of chromatin-binding proteins in Schizosaccharomyces pombe using a dual-crosslinking approach.

Authorship 1827328
type: Authorship
author rank in publication: 1
linked author: Khanduja, Jasbeer
linked information resource: Protocol for the development and use of spike-in control for chromatin immunoprecipitation (ChIP) of chromatin-binding proteins.

Authorship 1848490
type: Authorship
author rank in publication: 4
linked author: Khanduja, Jasbeer
linked information resource: Discrete Subdomains Establish Epigenetic Diversity in Subtelomeric Heterochromatin.

Protocol for development and use of spike-in control for chromatin immunoprecipitation of chromatin-binding proteins in Schizosaccharomyces pombe.
PubMed Identifier: 40748763
author list: Khanduja JS, Motamedi M
published in: STAR protocols
information resource reference: Protocol for development and use of spike-in control for chromatin immunoprecipitation of chromatin-binding proteins in Schizosaccharomyces pombe. STAR Protoc. 2025 Sep 19; 6(3):104007.
journal title abbreviation: STAR Protoc
publication date: 2025-07-31T00:00:00
year: 2025
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Protocol for chromatin immunoprecipitation of chromatin-binding proteins in Schizosaccharomyces pombe using a dual-crosslinking approach.
PubMed Identifier: 40085649
author list: Khanduja JS, Motamedi M
published in: STAR protocols
information resource reference: Protocol for chromatin immunoprecipitation of chromatin-binding proteins in Schizosaccharomyces pombe using a dual-crosslinking approach. STAR Protoc. 2025 Mar 21; 6(1):103695.
journal title abbreviation: STAR Protoc
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Protocol for the development and use of spike-in control for chromatin immunoprecipitation (ChIP) of chromatin-binding proteins.
PubMed Identifier: 40661419
author list: Khanduja JS, Motamedi M
published in: bioRxiv : the preprint server for biology
information resource reference: Protocol for the development and use of spike-in control for chromatin immunoprecipitation (ChIP) of chromatin-binding proteins. bioRxiv. 2025 May 16.
journal title abbreviation: bioRxiv
publication date: 2025-05-16T00:00:00
year: 2025
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Discrete Subdomains Establish Epigenetic Diversity in Subtelomeric Heterochromatin.
PubMed Identifier: 41040388
author list: Mazumder A, Cooper J, Goksal C, Khanduja JS, Joh RI, Groos JJ, Brockhausen RYJ, Kanoh J, Motamedi M, Finkelstein IJ, Al-Sady B, Braun S
published in: bioRxiv : the preprint server for biology
information resource reference: Discrete Subdomains Establish Epigenetic Diversity in Subtelomeric Heterochromatin. bioRxiv. 2025 Sep 25.
journal title abbreviation: bioRxiv
publication date: 2025-09-25T00:00:00
year: 2025
type: Academic Article
type: Article
type: Document
type: Information Resource

Associate Professor of Pathology
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Authorship 276361
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author rank in publication: 3
linked author: Khanduja, Jasbeer
linked information resource: Structure of Mycobacterium tuberculosis RuvA, a protein involved in recombination.

Authorship 475855
type: Authorship
author rank in publication: 3
linked author: Khanduja, Jasbeer
linked information resource: Mycobacterium tuberculosis UvrD1 and UvrA proteins suppress DNA strand exchange promoted by cognate and noncognate RecA proteins.

Authorship 416303
type: Authorship
author rank in publication: 1
linked author: Khanduja, Jasbeer
linked information resource: Mycobacterium tuberculosis RuvA induces two distinct types of structural distortions between the homologous and heterologous Holliday junctions.

Authorship 838009
type: Authorship
author rank in publication: 3
linked author: Khanduja, Jasbeer
linked information resource: https://connects.catalyst.harvard.edu/Profiles/profile/61718505

https://connects.catalyst.harvard.edu/Profiles/profile/61718505
PubMed Identifier: 26276393
author list: Thakur RS, Basavaraju S, Khanduja JS, Muniyappa K, Nagaraju G
published in: The Journal of biological chemistry
information resource reference: Mycobacterium tuberculosis RecG protein but not RuvAB or RecA protein is efficient at remodeling the stalled replication forks: implications for multiple mechanisms of replication restart in mycobacteria. J Biol Chem. 2015 Oct 02; 290(40):24119-39.
journal title abbreviation: J Biol Chem
publication date: 2015-08-14T00:00:00
year: 2015
type: Academic Article
type: Article
type: Document
type: Information Resource
label: Mycobacterium tuberculosis RecG protein but not RuvAB or RecA protein is efficient at remodeling the stalled replication forks: implications for multiple mechanisms of replication restart in mycobacteria.

Assistant Professor
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Associate Professor
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Full Professor
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Instructor
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Authorship 892301
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linked author: Khanduja, Jasbeer
linked information resource: Nuclear Noncoding RNAs and Genome Stability.

Nuclear Noncoding RNAs and Genome Stability.
PubMed Identifier: 27392145
author list: Khanduja JS, Calvo IA, Joh RI, Hill IT, Motamedi M
published in: Molecular cell
information resource reference: Nuclear Noncoding RNAs and Genome Stability. Mol Cell. 2016 07 07; 63(1):7-20.
journal title abbreviation: Mol Cell
publication date: 2016-07-07T00:00:00
year: 2016
type: Academic Article
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type: Document
type: Information Resource

Authorship 941007
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author rank in publication: 2
linked author: Khanduja, Jasbeer
linked information resource: Survival in Quiescence Requires the Euchromatic Deployment of Clr4/SUV39H by Argonaute-Associated Small RNAs.

Survival in Quiescence Requires the Euchromatic Deployment of Clr4/SUV39H by Argonaute-Associated Small RNAs.
PubMed Identifier: 27984744
author list: Joh RI, Khanduja JS, Calvo IA, Mistry M, Palmieri CM, Savol AJ, Ho Sui SJ, Sadreyev RI, Aryee MJ, Motamedi M
published in: Molecular cell
information resource reference: Survival in Quiescence Requires the Euchromatic Deployment of Clr4/SUV39H by Argonaute-Associated Small RNAs. Mol Cell. 2016 12 15; 64(6):1088-1101.
journal title abbreviation: Mol Cell
publication date: 2016-12-15T00:00:00
year: 2016
type: Academic Article
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type: Document
type: Information Resource

149 13th Street
type: Address
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address line 3: 149 13th Street
city: Charlestown
postal code: 02129
state or province: MA

Structure of Mycobacterium tuberculosis RuvA, a protein involved in recombination.
PubMed Identifier: 16880543
author list: Prabu JR, Thamotharan S, Khanduja JS, Alipio EZ, Kim CY, Waldo GS, Terwilliger TC, Segelke B, Lekin T, Toppani D, Hung LW, Yu M, Bursey E, Muniyappa K, Chandra NR, Vijayan M
published in: Acta crystallographica. Section F, Structural biology and crystallization communications
information resource reference: Structure of Mycobacterium tuberculosis RuvA, a protein involved in recombination. Acta Crystallogr Sect F Struct Biol Cryst Commun. 2006 Aug 01; 62(Pt 8):731-4.
journal title abbreviation: Acta Crystallogr Sect F Struct Biol Cryst Commun
publication date: 2006-07-24T00:00:00
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type: Academic Article
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Mycobacterium tuberculosis UvrD1 and UvrA proteins suppress DNA strand exchange promoted by cognate and noncognate RecA proteins.
PubMed Identifier: 20455546
author list: Singh P, Patil KN, Khanduja JS, Kumar PS, Williams A, Rossi F, Rizzi M, Davis EO, Muniyappa K
published in: Biochemistry
information resource reference: Mycobacterium tuberculosis UvrD1 and UvrA proteins suppress DNA strand exchange promoted by cognate and noncognate RecA proteins. Biochemistry. 2010 Jun 15; 49(23):4872-83.
journal title abbreviation: Biochemistry
publication date: 2010-06-15T00:00:00
year: 2010
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Functional analysis of DNA replication fork reversal catalyzed by Mycobacterium tuberculosis RuvAB proteins.
PubMed Identifier: 22094465
author list: Khanduja JS, Muniyappa K
published in: The Journal of biological chemistry
information resource reference: Functional analysis of DNA replication fork reversal catalyzed by Mycobacterium tuberculosis RuvAB proteins. J Biol Chem. 2012 Jan 06; 287(2):1345-60.
journal title abbreviation: J Biol Chem
publication date: 2011-11-17T00:00:00
year: 2011
type: Academic Article
type: Article
type: Document
type: Information Resource