Rajagopal, Jayaraj
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first name: Jayaraj
last name: Rajagopal
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Authorship 1045865
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author rank in publication: 2
linked author: Rajagopal, Jayaraj
linked information resource: The epigenetic basis of cellular plasticity.

Authorship 1048671
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author rank in publication: 11
linked author: Rajagopal, Jayaraj
linked information resource: A Conserved Distal Lung Regenerative Pathway in Acute Lung Injury.

The epigenetic basis of cellular plasticity.
PubMed Identifier: 29413970
author list: Paksa A, Rajagopal J
published in: Current opinion in cell biology
information resource reference: The epigenetic basis of cellular plasticity. Curr Opin Cell Biol. 2017 12; 49:116-122.
journal title abbreviation: Curr Opin Cell Biol
publication date: 2018-02-04T00:00:00
year: 2018
type: Academic Article
type: Article
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Developmental History Provides a Roadmap for the Emergence of Tumor Plasticity.
PubMed Identifier: 29587142
author list: Tata PR, Chow RD, Saladi SV, Tata A, Konkimalla A, Bara A, Montoro D, Hariri LP, Shih AR, Mino-Kenudson M, Mou H, Kimura S, Ellisen LW, Rajagopal J
published in: Developmental cell
information resource reference: Developmental History Provides a Roadmap for the Emergence of Tumor Plasticity. Dev Cell. 2018 03 26; 44(6):679-693.e5.
journal title abbreviation: Dev Cell
publication date: 2018-03-26T00:00:00
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linked information resource: Developmental History Provides a Roadmap for the Emergence of Tumor Plasticity.

Notch signaling promotes airway mucous metaplasia and inhibits alveolar development.
PubMed Identifier: 19369400
author list: Guseh JS, Bores SA, Stanger BZ, Zhou Q, Anderson WJ, Melton DA, Rajagopal J
published in: Development (Cambridge, England)
information resource reference: Notch signaling promotes airway mucous metaplasia and inhibits alveolar development. Development. 2009 May; 136(10):1751-9.
journal title abbreviation: Development
publication date: 2009-04-15T00:00:00
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Submucosal Gland Myoepithelial Cells Are Reserve Stem Cells That Can Regenerate Mouse Tracheal Epithelium.
PubMed Identifier: 29656941
author list: Lynch TJ, Anderson PJ, Rotti PG, Tyler SR, Crooke AK, Choi SH, Montoro DT, Silverman CL, Shahin W, Zhao R, Jensen-Cody CW, Adamcakova-Dodd A, Evans TIA, Xie W, Zhang Y, Mou H, Herring BP, Thorne PS, Rajagopal J, Yeaman C, Parekh KR, Engelhardt JF
published in: Cell stem cell
information resource reference: Submucosal Gland Myoepithelial Cells Are Reserve Stem Cells That Can Regenerate Mouse Tracheal Epithelium. Cell Stem Cell. 2018 05 03; 22(5):653-667.e5.
journal title abbreviation: Cell Stem Cell
publication date: 2018-04-12T00:00:00
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linked information resource: Submucosal Gland Myoepithelial Cells Are Reserve Stem Cells That Can Regenerate Mouse Tracheal Epithelium.

Artifactual insulin release from differentiated embryonic stem cells.
PubMed Identifier: 15448090
author list: Hansson M, Tonning A, Frandsen U, Petri A, Rajagopal J, Englund MC, Heller RS, Håkansson J, Fleckner J, Sköld HN, Melton D, Semb H, Serup P
published in: Diabetes
information resource reference: Artifactual insulin release from differentiated embryonic stem cells. Diabetes. 2004 Oct; 53(10):2603-9.
journal title abbreviation: Diabetes
publication date: 2004-10-01T00:00:00
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Authorship 1062190
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linked information resource: Submucosal Gland Myoepithelial Cells Are Reserve Stem Cells That Can Regenerate Mouse Tracheal Epithelium.

Submucosal Gland Myoepithelial Cells Are Reserve Stem Cells That Can Regenerate Mouse Tracheal Epithelium.
PubMed Identifier: 29727685
author list: Lynch TJ, Anderson PJ, Rotti PG, Tyler SR, Crooke AK, Choi SH, Montoro DT, Silverman CL, Shahin W, Zhao R, Jensen-Cody CW, Adamcakova-Dodd A, Evans TIA, Xie W, Zhang Y, Mou H, Herring BP, Thorne PS, Rajagopal J, Yeaman C, Parekh KR, Engelhardt JF
published in: Cell stem cell
information resource reference: Submucosal Gland Myoepithelial Cells Are Reserve Stem Cells That Can Regenerate Mouse Tracheal Epithelium. Cell Stem Cell. 2018 05 03; 22(5):779.
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Authorship 1070943
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linked information resource: The Great Opportunity: Cultivating Scientific Inquiry in Medical Residency.

The Great Opportunity: Cultivating Scientific Inquiry in Medical Residency.
PubMed Identifier: 29878132
author list: Vyas JM, Rajagopal J, Sokol CL, Wein MN, Mansour MK, Corey KE, Fishman MC, Armstrong KA
published in: The Journal of infectious diseases
information resource reference: The Great Opportunity: Cultivating Scientific Inquiry in Medical Residency. J Infect Dis. 2018 08 14; 218(suppl_1):S44-S48.
journal title abbreviation: J Infect Dis
publication date: 2018-08-14T00:00:00
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Modulating Cell Fate as a Therapeutic Strategy.
PubMed Identifier: 29910150
author list: Lin B, Srikanth P, Castle AC, Nigwekar S, Malhotra R, Galloway JL, Sykes DB, Rajagopal J
published in: Cell stem cell
information resource reference: Modulating Cell Fate as a Therapeutic Strategy. Cell Stem Cell. 2018 09 06; 23(3):329-341.
journal title abbreviation: Cell Stem Cell
publication date: 2018-06-14T00:00:00
year: 2018
type: Academic Article
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Mutational analysis of conserved nucleotides in a self-splicing group I intron.
PubMed Identifier: 1700131
author list: Couture S, Ellington AD, Gerber AS, Cherry JM, Doudna JA, Green R, Hanna M, Pace U, Rajagopal J, Szostak JW
published in: Journal of molecular biology
information resource reference: Mutational analysis of conserved nucleotides in a self-splicing group I intron. J Mol Biol. 1990 Oct 05; 215(3):345-58.
journal title abbreviation: J Mol Biol
publication date: 1990-10-05T00:00:00
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Authorship 1074108
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linked information resource: Modulating Cell Fate as a Therapeutic Strategy.

Authorship 1076978
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linked information resource: CARMA3 Mediates Allergic Lung Inflammation in Response to Alternaria alternata.

CARMA3 Mediates Allergic Lung Inflammation in Response to Alternaria alternata.
PubMed Identifier: 29958012
author list: Causton B, Pardo-Saganta A, Gillis J, Discipio K, Kooistra T, Rajagopal J, Xavier RJ, Cho JL, Medoff BD
published in: American journal of respiratory cell and molecular biology
information resource reference: CARMA3 Mediates Allergic Lung Inflammation in Response to Alternaria alternata. Am J Respir Cell Mol Biol. 2018 12; 59(6):684-694.
journal title abbreviation: Am J Respir Cell Mol Biol
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Ciliated cells of pseudostratified airway epithelium do not become mucous cells after ovalbumin challenge.
PubMed Identifier: 23239495
author list: Pardo-Saganta A, Law BM, Gonzalez-Celeiro M, Vinarsky V, Rajagopal J
published in: American journal of respiratory cell and molecular biology
information resource reference: Ciliated cells of pseudostratified airway epithelium do not become mucous cells after ovalbumin challenge. Am J Respir Cell Mol Biol. 2013 Mar; 48(3):364-73.
journal title abbreviation: Am J Respir Cell Mol Biol
publication date: 2012-12-13T00:00:00
year: 2012
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Authorship 1085616
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linked author: Rajagopal, Jayaraj
linked information resource: A revised airway epithelial hierarchy includes CFTR-expressing ionocytes.

A revised airway epithelial hierarchy includes CFTR-expressing ionocytes.
PubMed Identifier: 30069044
author list: Montoro DT, Haber AL, Biton M, Vinarsky V, Lin B, Birket SE, Yuan F, Chen S, Leung HM, Villoria J, Rogel N, Burgin G, Tsankov AM, Waghray A, Slyper M, Waldman J, Nguyen L, Dionne D, Rozenblatt-Rosen O, Tata PR, Mou H, Shivaraju M, Bihler H, Mense M, Tearney GJ, Rowe SM, Engelhardt JF, Regev A, Rajagopal J
published in: Nature
information resource reference: A revised airway epithelial hierarchy includes CFTR-expressing ionocytes. Nature. 2018 08; 560(7718):319-324.
journal title abbreviation: Nature
publication date: 2018-08-01T00:00:00
year: 2018
type: Academic Article
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A Wnt7b-dependent pathway regulates the orientation of epithelial cell division and establishes the cortico-medullary axis of the mammalian kidney.
PubMed Identifier: 19060336
author list: Yu J, Carroll TJ, Rajagopal J, Kobayashi A, Ren Q, McMahon AP
published in: Development (Cambridge, England)
information resource reference: A Wnt7b-dependent pathway regulates the orientation of epithelial cell division and establishes the cortico-medullary axis of the mammalian kidney. Development. 2009 Jan; 136(1):161-71.
journal title abbreviation: Development
publication date: 2009-01-01T00:00:00
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Authorship 101907
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author rank in publication: 1
linked author: Rajagopal, Jayaraj
linked information resource: Wnt7b stimulates embryonic lung growth by coordinately increasing the replication of epithelium and mesenchyme.

In vivo reprogramming of adult pancreatic exocrine cells to beta-cells.
PubMed Identifier: 18754011
author list: Zhou Q, Brown J, Kanarek A, Rajagopal J, Melton DA
published in: Nature
information resource reference: In vivo reprogramming of adult pancreatic exocrine cells to beta-cells. Nature. 2008 Oct 02; 455(7213):627-32.
journal title abbreviation: Nature
publication date: 2008-08-27T00:00:00
year: 2008
type: Academic Article
type: Article
type: Document
type: Information Resource

TSC1 and TSC2 mutations in patients with lymphangioleiomyomatosis and tuberous sclerosis complex.
PubMed Identifier: 19419980
author list: Muzykewicz DA, Sharma A, Muse V, Numis AL, Rajagopal J, Thiele EA
published in: Journal of medical genetics
information resource reference: TSC1 and TSC2 mutations in patients with lymphangioleiomyomatosis and tuberous sclerosis complex. J Med Genet. 2009 Jul; 46(7):465-8.
journal title abbreviation: J Med Genet
publication date: 2009-05-05T00:00:00
year: 2009
type: Academic Article
type: Article
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Authorship 11863
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author rank in publication: 5
linked author: Rajagopal, Jayaraj
linked information resource: Noncanonical Wnt signaling through G protein-linked PKCdelta activation promotes bone formation.

Live Imaging of Intact Airway
end date: 2022-08-31
principal investigator name: RAJAGOPAL, JAYARAJ
start date: 2018-09-01
type: Grant
sponsor award id: R01HL142559

Principal Investigator
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researcher role of: Rajagopal, Jayaraj
contributes to: Live Imaging of Intact Airway

Cell Lineage
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Cystic Fibrosis
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Analytic & Translational Genetics Unit - ATGU
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Diabetes Unit
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MGH Cancer Center Research
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Pulmonary and Critical Care Medicine
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Epithelial Cells
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linked author: Rajagopal, Jayaraj
linked information resource: The Human Lung Cell Atlas: A High-Resolution Reference Map of the Human Lung in Health and Disease.

The Human Lung Cell Atlas: A High-Resolution Reference Map of the Human Lung in Health and Disease.
PubMed Identifier: 30995076
author list: Schiller HB, Montoro DT, Simon LM, Rawlins EL, Meyer KB, Strunz M, Vieira Braga FA, Timens W, Koppelman GH, Budinger GRS, Burgess JK, Waghray A, van den Berge M, Theis FJ, Regev A, Kaminski N, Rajagopal J, Teichmann SA, Misharin AV, Nawijn MC
published in: American journal of respiratory cell and molecular biology
information resource reference: The Human Lung Cell Atlas: A High-Resolution Reference Map of the Human Lung in Health and Disease. Am J Respir Cell Mol Biol. 2019 07; 61(1):31-41.
journal title abbreviation: Am J Respir Cell Mol Biol
publication date: 2019-07-01T00:00:00
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Authorship 115554
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linked author: Rajagopal, Jayaraj
linked information resource: A multipotent progenitor domain guides pancreatic organogenesis.

Stem Cells
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Respiratory Mucosa
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linked author: Rajagopal, Jayaraj
linked information resource: Sprouty-2 regulates oncogenic K-ras in lung development and tumorigenesis.

Environmental Health
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Immunology
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Boston Children's Hospital
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Dana-Farber Cancer Institute
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Harvard Medical School
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Harvard T.H. Chan School of Public Health
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Massachusetts General Hospital
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Schepens Eye Research Institute
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Dartt, Darlene
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Merkulova, Maria
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Shivdasani, Ramesh
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Mostoslavsky, Raul
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Sawicki, Gregory
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Daley, George
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Vyas, Jatin
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Brown, Dennis
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Daly, Mark
eCommons Login: MJD21
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person in primary position: Associate Professor of Medicine
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Perrimon, Norbert
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first name: Norbert
last name: Perrimon
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has faculty rank: Full Professor
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Person ID: 6247
person in primary position: James Stillman Professor of Developmental Biology
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Soukas, Alexander
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first name: Alexander
last name: Soukas
full name: Alexander Anastasios Soukas, M.D., Ph.D.
has faculty rank: Associate Professor
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person in primary position: Associate Professor of Medicine
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Mou, Hongmei
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first name: Hongmei
last name: Mou
full name: Hongmei Mou, Ph.D.
has faculty rank: Assistant Professor
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Person ID: 10864
person in primary position: Assistant Professor of Pediatrics
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preferred title: Assistant Professor of Pediatrics

Surve, Manalee
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first name: Manalee
last name: Surve
full name: Manalee Vishnu Surve, Ph.D.
has faculty rank: Instructor
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person in primary position: Instructor in Medicine
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Professor of Medicine
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position in department: Medicine
position in division: Nephrology
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HR job title: Professor of Medicine
position in organization: Massachusetts General Hospital

Instructor in Medicine
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position in division: Nephrology
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HR job title: Instructor in Medicine
position in organization: Massachusetts General Hospital

Associate Professor of Medicine
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position in division: Diabetes Unit
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HR job title: Associate Professor of Medicine
position in organization: Massachusetts General Hospital

Professor of Ophthalmology
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HR job title: Professor of Ophthalmology
position in organization: Schepens Eye Research Institute

Associate Professor of Medicine
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position in division: Analytic & Translational Genetics Unit - ATGU
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HR job title: Associate Professor of Medicine
position in organization: Massachusetts General Hospital

Professor of Medicine
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position in department: Medicine
position in division: Adult Oncology
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HR job title: Professor of Medicine
position in organization: Dana-Farber Cancer Institute

Laurel Schwartz Professor of Medicine in the Field of Oncology
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position in department: Medicine
position in division: MGH Cancer Center Research
sort order: 1
type: Position
HR job title: Laurel Schwartz Professor of Medicine in the Field of Oncology
position in organization: Massachusetts General Hospital

Haber, Adam
eCommons Login: ALH48
first name: Adam
last name: Haber
full name: Adam Haber, Ph.D.
has faculty rank: Associate Professor
photo: https://connects.catalyst.harvard.edu/Profiles/profile/Modules/CustomViewPersonGeneralInfo/PhotoHandler.ashx
Person ID: 187274
person in primary position: Associate Professor of Computational Biology and Environmental Health
type: Agent
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preferred title: Associate Professor of Computational Biology and Environmental Health

Authorship 1234246
type: Authorship
author rank in publication: 5
linked author: Rajagopal, Jayaraj
linked information resource: A Synthesis Concerning Conservation and Divergence of Cell Types across Epithelia.

A Synthesis Concerning Conservation and Divergence of Cell Types across Epithelia.
PubMed Identifier: 32122885
author list: Montoro DT, Haber AL, Rood JE, Regev A, Rajagopal J
published in: Cold Spring Harbor perspectives in biology
information resource reference: A Synthesis Concerning Conservation and Divergence of Cell Types across Epithelia. Cold Spring Harb Perspect Biol. 2020 11 02; 12(11).
journal title abbreviation: Cold Spring Harb Perspect Biol
publication date: 2020-11-02T00:00:00
year: 2020
type: Academic Article
type: Article
type: Document
type: Information Resource

Authorship 1252786
type: Authorship
author rank in publication: 43
linked author: Rajagopal, Jayaraj
linked information resource: Building an international consortium for tracking coronavirus health status.

Building an international consortium for tracking coronavirus health status.
PubMed Identifier: 32488218
author list: Segal E, Zhang F, Lin X, King G, Shalem O, Shilo S, Allen WE, Alquaddoomi F, Altae-Tran H, Anders S, Balicer R, Bauman T, Bonilla X, Booman G, Chan AT, Cohen O, Coletti S, Davidson N, Dor Y, Drew DA, Elemento O, Evans G, Ewels P, Gale J, Gavrieli A, Geiger B, Grad YH, Greene CS, Hajirasouliha I, Jerala R, Kahles A, Kallioniemi O, Keshet A, Kocarev L, Landua G, Meir T, Muller A, Nguyen LH, Oresic M, Ovchinnikova S, Peterson H, Prodanova J, Rajagopal J, Rätsch G, Rossman H, Rung J, Sboner A, Sigaras A, Spector T, Steinherz R, Stevens I, Vilo J, Wilmes P
published in: Nature medicine
information resource reference: Building an international consortium for tracking coronavirus health status. Nat Med. 2020 08; 26(8):1161-1165.
journal title abbreviation: Nat Med
publication date: 2020-08-01T00:00:00
year: 2020
type: Academic Article
type: Article
type: Document
type: Information Resource

Authorship 1259588
type: Authorship
author rank in publication: 43
linked author: Rajagopal, Jayaraj
linked information resource: Publisher Correction: Building an international consortium for tracking coronavirus health status.

Publisher Correction: Building an international consortium for tracking coronavirus health status.
PubMed Identifier: 32591764
author list: Segal E, Zhang F, Lin X, King G, Shalem O, Shilo S, Allen WE, Alquaddoomi F, Altae-Tran H, Anders S, Balicer R, Bauman T, Bonilla X, Booman G, Chan AT, Cohen O, Coletti S, Davidson N, Dor Y, Drew DA, Elemento O, Evans G, Ewels P, Gale J, Gavrieli A, Geiger B, Grad YH, Greene CS, Hajirasouliha I, Jerala R, Kahles A, Kallioniemi O, Keshet A, Kocarev L, Landua G, Meir T, Muller A, Nguyen LH, Oresic M, Ovchinnikova S, Peterson H, Prodanova J, Rajagopal J, Rätsch G, Rossman H, Rung J, Sboner A, Sigaras A, Spector T, Steinherz R, Stevens I, Vilo J, Wilmes P
published in: Nature medicine
information resource reference: Publisher Correction: Building an international consortium for tracking coronavirus health status. Nat Med. 2020 08; 26(8):1309.
journal title abbreviation: Nat Med
publication date: 2020-08-01T00:00:00
year: 2020
type: Academic Article
type: Article
type: Document
type: Information Resource

Mechanisms governing the physiologic regulation of cell fate: Hypoxia-induced differentiation of neuroendocrine cells from stem cells
end date: 2025-05-31
principal investigator name: RAJAGOPAL, JAYARAJ
start date: 2020-07-01
type: Grant
sponsor award id: R01HL148351

Principal Investigator
type: Researcher Role
researcher role of: Rajagopal, Jayaraj
contributes to: Mechanisms governing the physiologic regulation of cell fate: Hypoxia-induced differentiation of neuroendocrine cells from stem cells

Authorship 1275230
type: Authorship
author rank in publication: 6
linked author: Rajagopal, Jayaraj
linked information resource: RUVBL1 is an amplified epigenetic factor promoting proliferation and inhibiting differentiation program in head and neck squamous cancers.

RUVBL1 is an amplified epigenetic factor promoting proliferation and inhibiting differentiation program in head and neck squamous cancers.
PubMed Identifier: 32745900
author list: Lin D, Lin B, Bhanot H, Riou R, Abt NB, Rajagopal J, Saladi SV
published in: Oral oncology
information resource reference: RUVBL1 is an amplified epigenetic factor promoting proliferation and inhibiting differentiation program in head and neck squamous cancers. Oral Oncol. 2020 12; 111:104930.
journal title abbreviation: Oral Oncol
publication date: 2020-07-31T00:00:00
year: 2020
type: Academic Article
type: Article
type: Document
type: Information Resource

BCMP
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Authorship 1314094
type: Authorship
author rank in publication: 11
linked author: Rajagopal, Jayaraj
linked information resource: Airway stem cells sense hypoxia and differentiate into protective solitary neuroendocrine cells.

Airway stem cells sense hypoxia and differentiate into protective solitary neuroendocrine cells.
PubMed Identifier: 33384370
author list: Shivaraju M, Chitta UK, Grange RMH, Jain IH, Capen D, Liao L, Xu J, Ichinose F, Zapol WM, Mootha VK, Rajagopal J
published in: Science (New York, N.Y.)
information resource reference: Airway stem cells sense hypoxia and differentiate into protective solitary neuroendocrine cells. Science. 2021 01 01; 371(6524):52-57.
journal title abbreviation: Science
publication date: 2021-01-01T00:00:00
year: 2021
type: Academic Article
type: Article
type: Document
type: Information Resource

Authorship 1335455
type: Authorship
author rank in publication: 79
linked author: Rajagopal, Jayaraj
linked information resource: A single-cell and spatial atlas of autopsy tissues reveals pathology and cellular targets of SARS-CoV-2.

A single-cell and spatial atlas of autopsy tissues reveals pathology and cellular targets of SARS-CoV-2.
PubMed Identifier: 33655247
author list: Delorey TM, Ziegler CGK, Heimberg G, Normand R, Yang Y, Segerstolpe A, Abbondanza D, Fleming SJ, Subramanian A, Montoro DT, Jagadeesh KA, Dey KK, Sen P, Slyper M, Pita-Juárez YH, Phillips D, Bloom-Ackerman Z, Barkas N, Ganna A, Gomez J, Normandin E, Naderi P, Popov YV, Raju SS, Niezen S, Tsai LT, Siddle KJ, Sud M, Tran VM, Vellarikkal SK, Amir-Zilberstein L, Atri DS, Beechem J, Brook OR, Chen J, Divakar P, Dorceus P, Engreitz JM, Essene A, Fitzgerald DM, Fropf R, Gazal S, Gould J, Grzyb J, Harvey T, Hecht J, Hether T, Jane-Valbuena J, Leney-Greene M, Ma H, McCabe C, McLoughlin DE, Miller EM, Muus C, Niemi M, Padera R, Pan L, Pant D, Pe'er C, Pfiffner-Borges J, Pinto CJ, Plaisted J, Reeves J, Ross M, Rudy M, Rueckert EH, Siciliano M, Sturm A, Todres E, Waghray A, Warren S, Zhang S, Zollinger DR, Cosimi L, Gupta RM, Hacohen N, Hide W, Price AL, Rajagopal J, Tata PR, Riedel S, Szabo G, Tickle TL, Hung D, Sabeti PC, Novak R, Rogers R, Ingber DE, Jiang ZG, Juric D, Babadi M, Farhi SL, Stone JR, Vlachos IS, Solomon IH, Ashenberg O, Porter CBM, Li B, Shalek AK, Villani AC, Rozenblatt-Rosen O, Regev A
published in: bioRxiv : the preprint server for biology
information resource reference: A single-cell and spatial atlas of autopsy tissues reveals pathology and cellular targets of SARS-CoV-2. bioRxiv. 2021 Feb 25.
journal title abbreviation: bioRxiv
publication date: 2021-02-25T00:00:00
year: 2021
type: Academic Article
type: Article
type: Document
type: Information Resource

COVID-19 tissue atlases reveal SARS-CoV-2 pathology and cellular targets.
PubMed Identifier: 33915569
author list: Delorey TM, Ziegler CGK, Heimberg G, Normand R, Yang Y, Segerstolpe Å, Abbondanza D, Fleming SJ, Subramanian A, Montoro DT, Jagadeesh KA, Dey KK, Sen P, Slyper M, Pita-Juárez YH, Phillips D, Biermann J, Bloom-Ackermann Z, Barkas N, Ganna A, Gomez J, Melms JC, Katsyv I, Normandin E, Naderi P, Popov YV, Raju SS, Niezen S, Tsai LT, Siddle KJ, Sud M, Tran VM, Vellarikkal SK, Wang Y, Amir-Zilberstein L, Atri DS, Beechem J, Brook OR, Chen J, Divakar P, Dorceus P, Engreitz JM, Essene A, Fitzgerald DM, Fropf R, Gazal S, Gould J, Grzyb J, Harvey T, Hecht J, Hether T, Jané-Valbuena J, Leney-Greene M, Ma H, McCabe C, McLoughlin DE, Miller EM, Muus C, Niemi M, Padera R, Pan L, Pant D, Pe'er C, Pfiffner-Borges J, Pinto CJ, Plaisted J, Reeves J, Ross M, Rudy M, Rueckert EH, Siciliano M, Sturm A, Todres E, Waghray A, Warren S, Zhang S, Zollinger DR, Cosimi L, Gupta RM, Hacohen N, Hibshoosh H, Hide W, Price AL, Rajagopal J, Tata PR, Riedel S, Szabo G, Tickle TL, Ellinor PT, Hung D, Sabeti PC, Novak R, Rogers R, Ingber DE, Jiang ZG, Juric D, Babadi M, Farhi SL, Izar B, Stone JR, Vlachos IS, Solomon IH, Ashenberg O, Porter CBM, Li B, Shalek AK, Villani AC, Rozenblatt-Rosen O, Regev A
published in: Nature
information resource reference: COVID-19 tissue atlases reveal SARS-CoV-2 pathology and cellular targets. Nature. 2021 07; 595(7865):107-113.
journal title abbreviation: Nature
publication date: 2021-04-29T00:00:00
year: 2021
type: Academic Article
type: Article
type: Document
type: Information Resource

Authorship 1346958
type: Authorship
author rank in publication: 11
linked author: Rajagopal, Jayaraj
linked information resource: Airway basal stem cells generate distinct subpopulations of PNECs.

Authorship 1348000
type: Authorship
author rank in publication: 84
linked author: Rajagopal, Jayaraj
linked information resource: COVID-19 tissue atlases reveal SARS-CoV-2 pathology and cellular targets.

Airway basal stem cells generate distinct subpopulations of PNECs.
PubMed Identifier: 33882306
author list: Mou H, Yang Y, Riehs MA, Barrios J, Shivaraju M, Haber AL, Montoro DT, Gilmore K, Haas EA, Paunovic B, Rajagopal J, Vargas SO, Haynes RL, Fine A, Cardoso WV, Ai X
published in: Cell reports
information resource reference: Airway basal stem cells generate distinct subpopulations of PNECs. Cell Rep. 2021 04 20; 35(3):109011.
journal title abbreviation: Cell Rep
publication date: 2021-04-20T00:00:00
year: 2021
type: Academic Article
type: Article
type: Document
type: Information Resource

Authorship 1388041
type: Authorship
author rank in publication: 5
linked author: Rajagopal, Jayaraj
linked information resource: Cystic Fibrosis and the Cells of the Airway Epithelium: What Are Ionocytes and What Do They Do?

Cystic Fibrosis and the Cells of the Airway Epithelium: What Are Ionocytes and What Do They Do?
PubMed Identifier: 34437820
author list: Shah VS, Chivukula RR, Lin B, Waghray A, Rajagopal J
published in: Annual review of pathology
information resource reference: Cystic Fibrosis and the Cells of the Airway Epithelium: What Are Ionocytes and What Do They Do? Annu Rev Pathol. 2022 01 24; 17:23-46.
journal title abbreviation: Annu Rev Pathol
publication date: 2021-08-26T00:00:00
year: 2021
type: Academic Article
type: Article
type: Document
type: Information Resource

Single-cell proteomic identification of novel markers of senescence
end date: 2023-08-31
principal investigator name: DOU, ZHIXUN ;RAJAGOPAL, JAYARAJ ;SLAVOV, NIKOLAI
start date: 2021-09-22
type: Grant
sponsor award id: UG3CA268117

Co-Principal Investigator
type: Researcher Role
researcher role of: Rajagopal, Jayaraj
contributes to: Single-cell proteomic identification of novel markers of senescence

Authorship 34152
type: Authorship
author rank in publication: 1
linked author: Rajagopal, Jayaraj
linked information resource: Is there more to lung development than steroids and surfactant?

Authorship 1484270
type: Authorship
author rank in publication: 4
linked author: Rajagopal, Jayaraj
linked information resource: Upregulation of PD-L1 in Senescence and Aging.

Upregulation of PD-L1 in Senescence and Aging.
PubMed Identifier: 36154662
author list: Onorati A, Havas AP, Lin B, Rajagopal J, Sen P, Adams PD, Dou Z
published in: Molecular and cellular biology
information resource reference: Upregulation of PD-L1 in Senescence and Aging. Mol Cell Biol. 2022 10 20; 42(10):e0017122.
journal title abbreviation: Mol Cell Biol
publication date: 2022-09-26T00:00:00
year: 2022
type: Academic Article
type: Article
type: Document
type: Information Resource

Authorship 1516562
type: Authorship
author rank in publication: 6
linked author: Rajagopal, Jayaraj
linked information resource: Human Airway Epithelium Responses to Invasive Fungal Infections: A Critical Partner in Innate Immunity.

Human Airway Epithelium Responses to Invasive Fungal Infections: A Critical Partner in Innate Immunity.
PubMed Identifier: 36675861
author list: Crossen AJ, Ward RA, Reedy JL, Surve MV, Klein BS, Rajagopal J, Vyas JM
published in: Journal of fungi (Basel, Switzerland)
information resource reference: Human Airway Epithelium Responses to Invasive Fungal Infections: A Critical Partner in Innate Immunity. J Fungi (Basel). 2022 Dec 27; 9(1).
journal title abbreviation: J Fungi (Basel)
publication date: 2022-12-27T00:00:00
year: 2022
type: Academic Article
type: Article
type: Document
type: Information Resource

Authorship 251540
type: Authorship
author rank in publication: 11
linked author: Rajagopal, Jayaraj
linked information resource: Generation of multipotent lung and airway progenitors from mouse ESCs and patient-specific cystic fibrosis iPSCs.

Authorship 1563581
type: Authorship
author rank in publication: 16
linked author: Rajagopal, Jayaraj
linked information resource: Fungal melanin suppresses airway epithelial chemokine secretion through blockade of calcium fluxing.

Authorship 1570292
type: Authorship
author rank in publication: 62
linked author: Rajagopal, Jayaraj
linked information resource: An integrated cell atlas of the lung in health and disease.

Authorship 1559312
type: Authorship
author rank in publication: 7
linked author: Rajagopal, Jayaraj
linked information resource: Autofluorescence imaging permits label-free cell type assignment and reveals the dynamic formation of airway secretory cell associated antigen passages (SAPs).

Authorship 1561598
type: Authorship
author rank in publication: 2
linked author: Rajagopal, Jayaraj
linked information resource: Cystic Fibrosis: "Ionocyte Modulators"?

Fungal melanin suppresses airway epithelial chemokine secretion through blockade of calcium fluxing.
PubMed Identifier: 37034634
author list: Reedy JL, Jensen KN, Crossen AJ, Basham KJ, Ward RA, Reardon CM, Harding HB, Hepworth OW, Simaku P, Kwaku GN, Tone K, Willment JA, Reid DM, Stappers MHT, Brown GD, Rajagopal J, Vyas JM
published in: bioRxiv : the preprint server for biology
information resource reference: Fungal melanin suppresses airway epithelial chemokine secretion through blockade of calcium fluxing. bioRxiv. 2024 May 06.
journal title abbreviation: bioRxiv
publication date: 2024-05-06T00:00:00
year: 2024
type: Academic Article
type: Article
type: Document
type: Information Resource

An integrated cell atlas of the lung in health and disease.
PubMed Identifier: 37291214
author list: Sikkema L, Ramírez-Suástegui C, Strobl DC, Gillett TE, Zappia L, Madissoon E, Markov NS, Zaragosi LE, Ji Y, Ansari M, Arguel MJ, Apperloo L, Banchero M, Bécavin C, Berg M, Chichelnitskiy E, Chung MI, Collin A, Gay ACA, Gote-Schniering J, Hooshiar Kashani B, Inecik K, Jain M, Kapellos TS, Kole TM, Leroy S, Mayr CH, Oliver AJ, von Papen M, Peter L, Taylor CJ, Walzthoeni T, Xu C, Bui LT, De Donno C, Dony L, Faiz A, Guo M, Gutierrez AJ, Heumos L, Huang N, Ibarra IL, Jackson ND, Kadur Lakshminarasimha Murthy P, Lotfollahi M, Tabib T, Talavera-López C, Travaglini KJ, Wilbrey-Clark A, Worlock KB, Yoshida M, van den Berge M, Bossé Y, Desai TJ, Eickelberg O, Kaminski N, Krasnow MA, Lafyatis R, Nikolic MZ, Powell JE, Rajagopal J, Rojas M, Rozenblatt-Rosen O, Seibold MA, Sheppard D, Shepherd DP, Sin DD, Timens W, Tsankov AM, Whitsett J, Xu Y, Banovich NE, Barbry P, Duong TE, Falk CS, Meyer KB, Kropski JA, Pe'er D, Schiller HB, Tata PR, Schultze JL, Teichmann SA, Misharin AV, Nawijn MC, Luecken MD, Theis FJ
published in: Nature medicine
information resource reference: An integrated cell atlas of the lung in health and disease. Nat Med. 2023 06; 29(6):1563-1577.
journal title abbreviation: Nat Med
publication date: 2023-06-08T00:00:00
year: 2023
type: Academic Article
type: Article
type: Document
type: Information Resource

Autofluorescence imaging permits label-free cell type assignment and reveals the dynamic formation of airway secretory cell associated antigen passages (SAPs).
PubMed Identifier: 36994985
author list: Shah VS, Hou J, Vinarsky V, Xu J, Surve MV, Lin CP, Rajagopal J
published in: eLife
information resource reference: Autofluorescence imaging permits label-free cell type assignment and reveals the dynamic formation of airway secretory cell associated antigen passages (SAPs). Elife. 2023 03 30; 12.
journal title abbreviation: Elife
publication date: 2023-03-30T00:00:00
year: 2023
type: Academic Article
type: Article
type: Document
type: Information Resource

Cystic Fibrosis: "Ionocyte Modulators"?
PubMed Identifier: 37315655
author list: Shah VS, Rajagopal J
published in: American journal of respiratory cell and molecular biology
information resource reference: Cystic Fibrosis: "Ionocyte Modulators"? Am J Respir Cell Mol Biol. 2023 09; 69(3):250-252.
journal title abbreviation: Am J Respir Cell Mol Biol
publication date: 2023-09-01T00:00:00
year: 2023
type: Academic Article
type: Article
type: Document
type: Information Resource

Authorship 1585153
type: Authorship
author rank in publication: 8
linked author: Rajagopal, Jayaraj
linked information resource: Single Cell Transcriptomes, Lineage, and Differentiation of Functional Airway Microfold Cells.

Single Cell Transcriptomes, Lineage, and Differentiation of Functional Airway Microfold Cells.
PubMed Identifier: 37609222
author list: Surve MV, Lin B, Reedy JL, Crossen AJ, Xu A, Klein BS, Vyas JM, Rajagopal J
published in: bioRxiv : the preprint server for biology
information resource reference: Single Cell Transcriptomes, Lineage, and Differentiation of Functional Airway Microfold Cells. bioRxiv. 2023 Aug 07.
journal title abbreviation: bioRxiv
publication date: 2023-08-07T00:00:00
year: 2023
type: Academic Article
type: Article
type: Document
type: Information Resource

Authorship 1608712
type: Authorship
author rank in publication: 8
linked author: Rajagopal, Jayaraj
linked information resource: Single-Cell Transcriptomes, Lineage, and Differentiation of Functional Airway Microfold Cells.

Single-Cell Transcriptomes, Lineage, and Differentiation of Functional Airway Microfold Cells.
PubMed Identifier: 38038398
author list: Surve MV, Lin B, Reedy JL, Crossen AJ, Xu A, Klein BS, Vyas JM, Rajagopal J
published in: American journal of respiratory cell and molecular biology
information resource reference: Single-Cell Transcriptomes, Lineage, and Differentiation of Functional Airway Microfold Cells. Am J Respir Cell Mol Biol. 2023 12; 69(6):698-701.
journal title abbreviation: Am J Respir Cell Mol Biol
publication date: 2023-12-01T00:00:00
year: 2023
type: Academic Article
type: Article
type: Document
type: Information Resource

Authorship 1615006
type: Authorship
author rank in publication: 23
linked author: Rajagopal, Jayaraj
linked information resource: A deep lung cell atlas reveals cytokine-mediated lineage switching of a rare cell progenitor of the human airway epithelium.

A deep lung cell atlas reveals cytokine-mediated lineage switching of a rare cell progenitor of the human airway epithelium.
PubMed Identifier: 38076853
author list: Waghray A, Monga I, Lin B, Shah V, Slyper M, Giotti B, Xu J, Waldman J, Dionne D, Nguyen LT, Lou W, Cai P, Park E, Muus C, Sun J, Surve MV, Yang LCC, Rozenblatt-Rosen O, Dolerey TM, Saladi SV, Tsankov AM, Regev A, Rajagopal J
published in: bioRxiv : the preprint server for biology
information resource reference: A deep lung cell atlas reveals cytokine-mediated lineage switching of a rare cell progenitor of the human airway epithelium. bioRxiv. 2023 Nov 29.
journal title abbreviation: bioRxiv
publication date: 2023-11-29T00:00:00
year: 2023
type: Academic Article
type: Article
type: Document
type: Information Resource

Airway hillocks are injury-resistant reservoirs of unique plastic stem cells.
PubMed Identifier: 38693267
author list: Lin B, Shah VS, Chernoff C, Sun J, Shipkovenska GG, Vinarsky V, Waghray A, Xu J, Leduc AD, Hintschich CA, Surve MV, Xu Y, Capen DE, Villoria J, Dou Z, Hariri LP, Rajagopal J
published in: Nature
information resource reference: Airway hillocks are injury-resistant reservoirs of unique plastic stem cells. Nature. 2024 05; 629(8013):869-877.
journal title abbreviation: Nature
publication date: 2024-05-01T00:00:00
year: 2024
type: Academic Article
type: Article
type: Document
type: Information Resource

Progenitors, Mechanisms of Differentiation, and Functions of Lung M Cells
end date: 2026-07-31
principal investigator name: RAJAGOPAL, JAYARAJ
start date: 2022-08-01
type: Grant
sponsor award id: R01HL164563

Single-cell proteomic identification of novel markers of senescence
end date: 2025-08-31
principal investigator name: DOU, ZHIXUN
start date: 2021-09-22
type: Grant
sponsor award id: UH3CA268117

Defining the lineage, mechanisms of maintenance, and function of a new injury-resistant airway epithelial structure: the hillock
end date: 2026-04-30
principal investigator name: RAJAGOPAL, JAYARAJ
start date: 2022-05-01
type: Grant
sponsor award id: R01HL157221

Co-Principal Investigator
type: Researcher Role
researcher role of: Rajagopal, Jayaraj
contributes to: Single-cell proteomic identification of novel markers of senescence

Principal Investigator
type: Researcher Role
researcher role of: Rajagopal, Jayaraj
contributes to: Progenitors, Mechanisms of Differentiation, and Functions of Lung M Cells

Principal Investigator
type: Researcher Role
researcher role of: Rajagopal, Jayaraj
contributes to: Defining the lineage, mechanisms of maintenance, and function of a new injury-resistant airway epithelial structure: the hillock

Authorship 1649035
type: Authorship
author rank in publication: 17
linked author: Rajagopal, Jayaraj
linked information resource: Airway hillocks are injury-resistant reservoirs of unique plastic stem cells.

Authorship 1665326
type: Authorship
author rank in publication: 33
linked author: Rajagopal, Jayaraj
linked information resource: Airway basal stem cells are necessary for the maintenance of functional intraepithelial airway macrophages.

Authorship 1665688
type: Authorship
author rank in publication: 16
linked author: Rajagopal, Jayaraj
linked information resource: Fungal melanin suppresses airway epithelial chemokine secretion through blockade of calcium fluxing.

Airway basal stem cells are necessary for the maintenance of functional intraepithelial airway macrophages.
PubMed Identifier: 38979172
author list: Kooistra T, Saez B, Roche M, Egea-Zorrilla A, Li D, Anketell D, Nguyen N, Villoria J, Gillis J, Petri E, Vera L, Blasco-Iturri Z, Smith NP, Alladina J, Zhang Y, Vinarsky V, Shivaraju M, Sheng SL, Gonzalez-Celeiro M, Mou H, Waghray A, Lin B, Paksa A, Yanger K, Tata PR, Zhao R, Causton B, Zulueta JJ, Prosper F, Cho JL, Villani AC, Haber A, Rajagopal J, Medoff BD, Pardo-Saganta A
published in: bioRxiv : the preprint server for biology
information resource reference: Airway basal stem cells are necessary for the maintenance of functional intraepithelial airway macrophages. bioRxiv. 2024 Jun 26.
journal title abbreviation: bioRxiv
publication date: 2024-06-26T00:00:00
year: 2024
type: Academic Article
type: Article
type: Document
type: Information Resource

Fungal melanin suppresses airway epithelial chemokine secretion through blockade of calcium fluxing.
PubMed Identifier: 38987270
author list: Reedy JL, Jensen KN, Crossen AJ, Basham KJ, Ward RA, Reardon CM, Brown Harding H, Hepworth OW, Simaku P, Kwaku GN, Tone K, Willment JA, Reid DM, Stappers MHT, Brown GD, Rajagopal J, Vyas JM
published in: Nature communications
information resource reference: Fungal melanin suppresses airway epithelial chemokine secretion through blockade of calcium fluxing. Nat Commun. 2024 Jul 10; 15(1):5817.
journal title abbreviation: Nat Commun
publication date: 2024-07-10T00:00:00
year: 2024
type: Academic Article
type: Article
type: Document
type: Information Resource

Authorship 24577
type: Authorship
author rank in publication: 1
linked author: Rajagopal, Jayaraj
linked information resource: Insulin staining of ES cell progeny from insulin uptake.

Associate Professor of Medicine
is primary position: true
position in department: Medicine
position in division: Infectious Disease
sort order: 1
type: Position
HR job title: Associate Professor of Medicine
position in organization: Massachusetts General Hospital

Authorship 302171
type: Authorship
author rank in publication: 2
linked author: Rajagopal, Jayaraj
linked information resource: Canonical Wnt signaling regulates organ-specific assembly and differentiation of CNS vasculature.

Mapping Airway Epithelial Cell-Immune Cell Interactions in Lung Health and Disease
end date: 2029-08-31
principal investigator name: MEDOFF, BENJAMIN DAVID
start date: 2024-09-01
type: Grant
sponsor award id: U01HL175384

Co-Principal Investigator
type: Researcher Role
researcher role of: Rajagopal, Jayaraj
contributes to: Mapping Airway Epithelial Cell-Immune Cell Interactions in Lung Health and Disease

Single-cell analysis of human airway epithelium identifies cell type-specific responses to Aspergillus and Coccidioides.
PubMed Identifier: 39314271
author list: Harding AT, Crossen AJ, Reedy JL, Basham KJ, Hepworth OW, Zhang Y, Shah VS, Harding HB, Surve MV, Simaku P, Kwaku GN, Jensen KN, Otto Y, Ward RA, Thompson GR, Klein BS, Rajagopal J, Sen P, Haber AL, Vyas JM
published in: bioRxiv : the preprint server for biology
information resource reference: Single-cell analysis of human airway epithelium identifies cell type-specific responses to Aspergillus and Coccidioides. bioRxiv. 2024 Sep 13.
journal title abbreviation: bioRxiv
publication date: 2024-09-13T00:00:00
year: 2024
type: Academic Article
type: Article
type: Document
type: Information Resource

A latent Axin2+/Scx+ progenitor pool is the central organizer of tendon healing.
PubMed Identifier: 39420021
author list: Grinstein M, Tsai SL, Montoro D, Freedman BR, Dingwall HL, Villaseñor S, Zou K, Sade-Feldman M, Tanaka MJ, Mooney DJ, Capellini TD, Rajagopal J, Galloway JL
published in: NPJ Regenerative medicine
information resource reference: A latent Axin2+/Scx+ progenitor pool is the central organizer of tendon healing. NPJ Regen Med. 2024 Oct 17; 9(1):30.
journal title abbreviation: NPJ Regen Med
publication date: 2024-10-17T00:00:00
year: 2024
type: Academic Article
type: Article
type: Document
type: Information Resource

Authorship 1700215
type: Authorship
author rank in publication: 17
linked author: Rajagopal, Jayaraj
linked information resource: Single-cell analysis of human airway epithelium identifies cell type-specific responses to Aspergillus and Coccidioides.

Authorship 1694441
type: Authorship
author rank in publication: 12
linked author: Rajagopal, Jayaraj
linked information resource: A latent Axin2+/Scx+ progenitor pool is the central organizer of tendon healing.

The TIPping point: Inflammation and Ionocyte loss.
PubMed Identifier: 39562851
author list: Shah VS, Rajagopal J
published in: Respirology (Carlton, Vic.)
information resource reference: The TIPping point: Inflammation and Ionocyte loss. Respirology. 2025 Jan; 30(1):13-15.
journal title abbreviation: Respirology
publication date: 2024-11-19T00:00:00
year: 2024
type: Academic Article
type: Article
type: Document
type: Information Resource

Authorship 1707440
type: Authorship
author rank in publication: 2
linked author: Rajagopal, Jayaraj
linked information resource: The TIPping point: Inflammation and Ionocyte loss.

Airway-specific inducible transgene expression using aerosolized doxycycline.
PubMed Identifier: 23848320
author list: Tata PR, Pardo-Saganta A, Prabhu M, Vinarsky V, Law BM, Fontaine BA, Tager AM, Rajagopal J
published in: American journal of respiratory cell and molecular biology
information resource reference: Airway-specific inducible transgene expression using aerosolized doxycycline. Am J Respir Cell Mol Biol. 2013 Dec; 49(6):1048-56.
journal title abbreviation: Am J Respir Cell Mol Biol
publication date: 2013-12-01T00:00:00
year: 2013
type: Academic Article
type: Article
type: Document
type: Information Resource

Professor of Medicine
is primary position: true
position in department: Medicine
position in division: Pulmonary and Critical Care Medicine
sort order: 1
type: Position
HR job title: Professor of Medicine
position in organization: Massachusetts General Hospital

Assistant Professor of Medicine
is primary position: true
position in department: Medicine
position in division: Pulmonary and Critical Care Medicine
sort order: 1
type: Position
HR job title: Assistant Professor of Medicine
position in organization: Massachusetts General Hospital

Authorship 688770
type: Authorship
author rank in publication: 6
linked author: Rajagopal, Jayaraj
linked information resource: Stem cells and cell therapies in lung biology and diseases: conference report.

Stem cells and cell therapies in lung biology and diseases: conference report.
PubMed Identifier: 23869447
author list: Weiss DJ, Bates JH, Gilbert T, Liles WC, Lutzko C, Rajagopal J, Prockop D
published in: Annals of the American Thoracic Society
information resource reference: Stem cells and cell therapies in lung biology and diseases: conference report. Ann Am Thorac Soc. 2013 Oct; 10(5):S25-44.
journal title abbreviation: Ann Am Thorac Soc
publication date: 2013-10-01T00:00:00
year: 2013
type: Academic Article
type: Article
type: Document
type: Information Resource

Authorship 691854
type: Authorship
author rank in publication: 12
linked author: Rajagopal, Jayaraj
linked information resource: Dedifferentiation of committed epithelial cells into stem cells in vivo.

Dedifferentiation of committed epithelial cells into stem cells in vivo.
PubMed Identifier: 24196716
author list: Tata PR, Mou H, Pardo-Saganta A, Zhao R, Prabhu M, Law BM, Vinarsky V, Cho JL, Breton S, Sahay A, Medoff BD, Rajagopal J
published in: Nature
information resource reference: Dedifferentiation of committed epithelial cells into stem cells in vivo. Nature. 2013 Nov 14; 503(7475):218-23.
journal title abbreviation: Nature
publication date: 2013-11-06T00:00:00
year: 2013
type: Academic Article
type: Article
type: Document
type: Information Resource

Authorship 1738975
type: Authorship
author rank in publication: 1
linked author: Rajagopal, Jayaraj
linked information resource: A compact, asymmetric probe, planar transient grating spectroscopy system.

A compact, asymmetric probe, planar transient grating spectroscopy system.
PubMed Identifier: 40029121
author list: Rajagopal J, Wylie APC, Dacus B, St Julian T, Short MP
published in: The Review of scientific instruments
information resource reference: A compact, asymmetric probe, planar transient grating spectroscopy system. Rev Sci Instrum. 2025 Mar 01; 96(3).
journal title abbreviation: Rev Sci Instrum
publication date: 2025-03-01T00:00:00
year: 2025
type: Academic Article
type: Article
type: Document
type: Information Resource

Authorship 696844
type: Authorship
author rank in publication: 8
linked author: Rajagopal, Jayaraj
linked information resource: Airway-specific inducible transgene expression using aerosolized doxycycline.

Single cell profiling of human airway identifies tuft-ionocyte progenitor cells displaying cytokine-dependent differentiation bias in vitro.
PubMed Identifier: 40467553
author list: Shah VS, Waghray A, Lin B, Bhagwat A, Monga I, Slyper M, Giotti B, Kim S, Sun D, Xu K, Park E, Bairakdar M, Xu J, Waldman J, Dionne D, Nguyen LT, Lou W, Cai P, Muus C, Sun J, Surve MV, Yang LCC, Rozenblatt-Rosen O, Delorey TM, Saladi SV, Regev A, Rajagopal J, Tsankov AM
published in: Nature communications
information resource reference: Single cell profiling of human airway identifies tuft-ionocyte progenitor cells displaying cytokine-dependent differentiation bias in vitro. Nat Commun. 2025 Jun 04; 16(1):5180.
journal title abbreviation: Nat Commun
publication date: 2025-06-04T00:00:00
year: 2025
type: Academic Article
type: Article
type: Document
type: Information Resource

James Stillman Professor of Developmental Biology
is primary position: true
position in department: Genetics
position in division: https://connects.catalyst.harvard.edu/Profiles/profile/1229413
sort order: 1
type: Position
HR job title: James Stillman Professor of Developmental Biology
position in organization: Harvard Medical School

Authorship 238860
type: Authorship
author rank in publication: 5
linked author: Rajagopal, Jayaraj
linked information resource: Multifocal micronodular pneumocyte hyperplasia: computed tomographic appearance and follow-up in tuberous sclerosis complex.

Single-cell analysis of human airway epithelium identifies cell-type-specific responses to Aspergillus and Coccidioides.
PubMed Identifier: 41081505
author list: Harding AT, Crossen AJ, Zhang Y, Reedy JL, Basham KJ, Hepworth OW, Shah VS, Brown Harding H, Surve MV, Simaku P, Kwaku GN, Nolling Jensen K, Otto Y, Ward RA, Thompson GR, Klein BS, Rajagopal J, Sen P, Haber AL, Vyas JM
published in: mBio
information resource reference: Single-cell analysis of human airway epithelium identifies cell-type-specific responses to Aspergillus and Coccidioides. mBio. 2025 Nov 12; 16(11):e0212125.
journal title abbreviation: mBio
publication date: 2025-10-13T00:00:00
year: 2025
type: Academic Article
type: Article
type: Document
type: Information Resource

Instructor in Medicine
is primary position: true
position in department: Medicine
position in division: Pulmonary and Critical Care Medicine
sort order: 1
type: Position
HR job title: Instructor in Medicine
position in organization: Massachusetts General Hospital

Authorship 724039
type: Authorship
author rank in publication: 5
linked author: Rajagopal, Jayaraj
linked information resource: Analysis of Notch signaling-dependent gene expression in developing airways reveals diversity of Clara cells.

Analysis of Notch signaling-dependent gene expression in developing airways reveals diversity of Clara cells.
PubMed Identifier: 24586412
author list: Guha A, Vasconcelos M, Zhao R, Gower AC, Rajagopal J, Cardoso WV
published in: PloS one
information resource reference: Analysis of Notch signaling-dependent gene expression in developing airways reveals diversity of Clara cells. PLoS One. 2014; 9(2):e88848.
journal title abbreviation: PLoS One
publication date: 2014-02-21T00:00:00
year: 2014
type: Academic Article
type: Article
type: Document
type: Information Resource

Authorship 1770200
type: Authorship
author rank in publication: 27
linked author: Rajagopal, Jayaraj
linked information resource: Single cell profiling of human airway identifies tuft-ionocyte progenitor cells displaying cytokine-dependent differentiation bias in vitro.

Authorship 1779246
type: Authorship
author rank in publication: 17
linked author: Rajagopal, Jayaraj
linked information resource: Single-cell analysis of human airway epithelium identifies cell-type-specific responses to Aspergillus and Coccidioides.

Authorship 1828563
type: Authorship
author rank in publication: 14
linked author: Rajagopal, Jayaraj
linked information resource: YAP1 drives aggressive and therapy resistant state in melanoma through reprogramming the chromatin and regulating immune evasive programs.

YAP1 drives aggressive and therapy resistant state in melanoma through reprogramming the chromatin and regulating immune evasive programs.
PubMed Identifier: 41000857
author list: Chen N, Bonilla G, Ai Emran A, Lin B, Bhanot H, Sun Y, Waghray A, Useche M, Liu D, Boland G, de la Serna IL, Sancisi V, Sattler M, Rajagopal J, Wu X, Sadreyev R, Fisher D, Saladi SV
published in: bioRxiv : the preprint server for biology
information resource reference: YAP1 drives aggressive and therapy resistant state in melanoma through reprogramming the chromatin and regulating immune evasive programs. bioRxiv. 2025 Sep 15.
journal title abbreviation: bioRxiv
publication date: 2025-09-15T00:00:00
year: 2025
type: Academic Article
type: Article
type: Document
type: Information Resource

Assistant Professor of Pediatrics
is primary position: true
position in department: Pediatrics
position in division: Immunology
sort order: 1
type: Position
HR job title: Assistant Professor of Pediatrics
position in organization: Massachusetts General Hospital

Yap tunes airway epithelial size and architecture by regulating the identity, maintenance, and self-renewal of stem cells.
PubMed Identifier: 25043474
author list: Zhao R, Fallon TR, Saladi SV, Pardo-Saganta A, Villoria J, Mou H, Vinarsky V, Gonzalez-Celeiro M, Nunna N, Hariri LP, Camargo F, Ellisen LW, Rajagopal J
published in: Developmental cell
information resource reference: Yap tunes airway epithelial size and architecture by regulating the identity, maintenance, and self-renewal of stem cells. Dev Cell. 2014 Jul 28; 30(2):151-65.
journal title abbreviation: Dev Cell
publication date: 2014-07-17T00:00:00
year: 2014
type: Academic Article
type: Article
type: Document
type: Information Resource

Associate Professor of Computational Biology and Environmental Health
is primary position: true
position in department: Environmental Health
position in division: https://connects.catalyst.harvard.edu/Profiles/profile/1229413
sort order: 1
type: Position
HR job title: Associate Professor of Computational Biology and Environmental Health
position in organization: Harvard T.H. Chan School of Public Health

Associate Professor of Pediatrics
is primary position: true
position in department: Pediatrics
position in division: Pulmonary
sort order: 1
type: Position
HR job title: Associate Professor of Pediatrics
position in organization: Boston Children's Hospital

Caroline Shields Walker Professor of Medicine
is primary position: true
position in department: BCMP
position in division: https://connects.catalyst.harvard.edu/Profiles/profile/1229413
sort order: 1
type: Position
HR job title: Caroline Shields Walker Professor of Medicine
position in organization: Harvard Medical School

Authorship 749547
type: Authorship
author rank in publication: 13
linked author: Rajagopal, Jayaraj
linked information resource: Yap tunes airway epithelial size and architecture by regulating the identity, maintenance, and self-renewal of stem cells.

Authorship 774259
type: Authorship
author rank in publication: 6
linked author: Rajagopal, Jayaraj
linked information resource: Enhanced lung epithelial specification of human induced pluripotent stem cells on decellularized lung matrix.

Enhanced lung epithelial specification of human induced pluripotent stem cells on decellularized lung matrix.
PubMed Identifier: 25149047
author list: Gilpin SE, Ren X, Okamoto T, Guyette JP, Mou H, Rajagopal J, Mathisen DJ, Vacanti JP, Ott HC
published in: The Annals of thoracic surgery
information resource reference: Enhanced lung epithelial specification of human induced pluripotent stem cells on decellularized lung matrix. Ann Thorac Surg. 2014 Nov; 98(5):1721-9; discussion 1729.
journal title abbreviation: Ann Thorac Surg
publication date: 2014-08-19T00:00:00
year: 2014
type: Academic Article
type: Article
type: Document
type: Information Resource

Authorship 470944
type: Authorship
author rank in publication: 8
linked author: Rajagopal, Jayaraj
linked information resource: Genetic targeting of the endoderm with claudin-6CreER.

Injury induces direct lineage segregation of functionally distinct airway basal stem/progenitor cell subpopulations.
PubMed Identifier: 25658372
author list: Pardo-Saganta A, Law BM, Tata PR, Villoria J, Saez B, Mou H, Zhao R, Rajagopal J
published in: Cell stem cell
information resource reference: Injury induces direct lineage segregation of functionally distinct airway basal stem/progenitor cell subpopulations. Cell Stem Cell. 2015 Feb 05; 16(2):184-97.
journal title abbreviation: Cell Stem Cell
publication date: 2015-02-05T00:00:00
year: 2015
type: Academic Article
type: Article
type: Document
type: Information Resource

Authorship 576028
type: Authorship
author rank in publication: 9
linked author: Rajagopal, Jayaraj
linked information resource: Efficient derivation of purified lung and thyroid progenitors from embryonic stem cells.

Authorship 544094
type: Authorship
author rank in publication: 5
linked author: Rajagopal, Jayaraj
linked information resource: TSC1 and TSC2 mutations in patients with lymphangioleiomyomatosis and tuberous sclerosis complex.

Authorship 539464
type: Authorship
author rank in publication: 5
linked author: Rajagopal, Jayaraj
linked information resource: Ciliated cells of pseudostratified airway epithelium do not become mucous cells after ovalbumin challenge.

Authorship 290436
type: Authorship
author rank in publication: 3
linked author: Rajagopal, Jayaraj
linked information resource: A Wnt7b-dependent pathway regulates the orientation of epithelial cell division and establishes the cortico-medullary axis of the mammalian kidney.

Authorship 298425
type: Authorship
author rank in publication: 1
linked author: Rajagopal, Jayaraj
linked information resource: Stereochemical course of catalysis by the Tetrahymena ribozyme.

CARMA3 Is Critical for the Initiation of Allergic Airway Inflammation.
PubMed Identifier: 26041536
author list: Causton B, Ramadas RA, Cho JL, Jones K, Pardo-Saganta A, Rajagopal J, Xavier RJ, Medoff BD
published in: Journal of immunology (Baltimore, Md. : 1950)
information resource reference: CARMA3 Is Critical for the Initiation of Allergic Airway Inflammation. J Immunol. 2015 Jul 15; 195(2):683-94.
journal title abbreviation: J Immunol
publication date: 2015-06-03T00:00:00
year: 2015
type: Academic Article
type: Article
type: Document
type: Information Resource

Authorship 306552
type: Authorship
author rank in publication: 7
linked author: Rajagopal, Jayaraj
linked information resource: Notch signaling promotes airway mucous metaplasia and inhibits alveolar development.

Authorship 283070
type: Authorship
author rank in publication: 5
linked author: Rajagopal, Jayaraj
linked information resource: Artifactual insulin release from differentiated embryonic stem cells.

Authorship 794744
type: Authorship
author rank in publication: 8
linked author: Rajagopal, Jayaraj
linked information resource: Injury induces direct lineage segregation of functionally distinct airway basal stem/progenitor cell subpopulations.

Authorship 798887
type: Authorship
author rank in publication: 12
linked author: Rajagopal, Jayaraj
linked information resource: Specific bone cells produce DLL4 to generate thymus-seeding progenitors from bone marrow.

Specific bone cells produce DLL4 to generate thymus-seeding progenitors from bone marrow.
PubMed Identifier: 25918341
author list: Yu VW, Saez B, Cook C, Lotinun S, Pardo-Saganta A, Wang YH, Lymperi S, Ferraro F, Raaijmakers MH, Wu JY, Zhou L, Rajagopal J, Kronenberg HM, Baron R, Scadden DT
published in: The Journal of experimental medicine
information resource reference: Specific bone cells produce DLL4 to generate thymus-seeding progenitors from bone marrow. J Exp Med. 2015 May 04; 212(5):759-74.
journal title abbreviation: J Exp Med
publication date: 2015-04-27T00:00:00
year: 2015
type: Academic Article
type: Article
type: Document
type: Information Resource

Authorship 809634
type: Authorship
author rank in publication: 6
linked author: Rajagopal, Jayaraj
linked information resource: CARMA3 Is Critical for the Initiation of Allergic Airway Inflammation.

Authorship 816301
type: Authorship
author rank in publication: 15
linked author: Rajagopal, Jayaraj
linked information resource: SNAP23 is selectively expressed in airway secretory cells and mediates baseline and stimulated mucin secretion.

SNAP23 is selectively expressed in airway secretory cells and mediates baseline and stimulated mucin secretion.
PubMed Identifier: 26182382
author list: Ren B, Azzegagh Z, Jaramillo AM, Zhu Y, Pardo-Saganta A, Bagirzadeh R, Flores JR, Han W, Tang YJ, Tu J, Alanis DM, Evans CM, Guindani M, Roche PA, Rajagopal J, Chen J, Davis CW, Tuvim MJ, Dickey BF
published in: Bioscience reports
information resource reference: SNAP23 is selectively expressed in airway secretory cells and mediates baseline and stimulated mucin secretion. Biosci Rep. 2015 Apr 28; 35(3).
journal title abbreviation: Biosci Rep
publication date: 2015-04-28T00:00:00
year: 2015
type: Academic Article
type: Article
type: Document
type: Information Resource

Identification of distinct layers within the stratified squamous epithelium of the adult human true vocal fold.
PubMed Identifier: 25988619
author list: Dowdall JR, Sadow PM, Hartnick C, Vinarsky V, Mou H, Zhao R, Song PC, Franco RA, Rajagopal J
published in: The Laryngoscope
information resource reference: Identification of distinct layers within the stratified squamous epithelium of the adult human true vocal fold. Laryngoscope. 2015 Sep; 125(9):E313-9.
journal title abbreviation: Laryngoscope
publication date: 2015-05-19T00:00:00
year: 2015
type: Academic Article
type: Article
type: Document
type: Information Resource

Authorship 818933
type: Authorship
author rank in publication: 8
linked author: Rajagopal, Jayaraj
linked information resource: Parent stem cells can serve as niches for their daughter cells.

Parent stem cells can serve as niches for their daughter cells.
PubMed Identifier: 26147083
author list: Pardo-Saganta A, Tata PR, Law BM, Saez B, Chow RD, Prabhu M, Gridley T, Rajagopal J
published in: Nature
information resource reference: Parent stem cells can serve as niches for their daughter cells. Nature. 2015 Jul 30; 523(7562):597-601.
journal title abbreviation: Nature
publication date: 2015-07-06T00:00:00
year: 2015
type: Academic Article
type: Article
type: Document
type: Information Resource

Authorship 393913
type: Authorship
author rank in publication: 4
linked author: Rajagopal, Jayaraj
linked information resource: In vivo reprogramming of adult pancreatic exocrine cells to beta-cells.

Authorship 830475
type: Authorship
author rank in publication: 9
linked author: Rajagopal, Jayaraj
linked information resource: Identification of distinct layers within the stratified squamous epithelium of the adult human true vocal fold.

Authorship 834486
type: Authorship
author rank in publication: 3
linked author: Rajagopal, Jayaraj
linked information resource: Personalized medicine for cystic fibrosis: establishing human model systems.

Personalized medicine for cystic fibrosis: establishing human model systems.
PubMed Identifier: 26335952
author list: Mou H, Brazauskas K, Rajagopal J
published in: Pediatric pulmonology
information resource reference: Personalized medicine for cystic fibrosis: establishing human model systems. Pediatr Pulmonol. 2015 Oct; 50 Suppl 40:S14-23.
journal title abbreviation: Pediatr Pulmonol
publication date: 2015-10-01T00:00:00
year: 2015
type: Academic Article
type: Article
type: Document
type: Information Resource

Authorship 515688
type: Authorship
author rank in publication: 9
linked author: Rajagopal, Jayaraj
linked information resource: Mutational analysis of conserved nucleotides in a self-splicing group I intron.

Authorship 471480
type: Authorship
author rank in publication: 10
linked author: Rajagopal, Jayaraj
linked information resource: In vivo imaging of tracheal epithelial cells in mice during airway regeneration.

Authorship 865563
type: Authorship
author rank in publication: 1
linked author: Rajagopal, Jayaraj
linked information resource: Plasticity in the Adult: How Should the Waddington Diagram Be Applied to Regenerating Tissues?

Plasticity in the Adult: How Should the Waddington Diagram Be Applied to Regenerating Tissues?
PubMed Identifier: 26812013
author list: Rajagopal J, Stanger BZ
published in: Developmental cell
information resource reference: Plasticity in the Adult: How Should the Waddington Diagram Be Applied to Regenerating Tissues? Dev Cell. 2016 Jan 25; 36(2):133-7.
journal title abbreviation: Dev Cell
publication date: 2016-01-25T00:00:00
year: 2016
type: Academic Article
type: Article
type: Document
type: Information Resource

Assistant Professor
sort order: 2
type: Faculty Rank

Associate Professor
sort order: 1
type: Faculty Rank

Full Professor
sort order: 0
type: Faculty Rank

Instructor
sort order: 4
type: Faculty Rank

Dual SMAD Signaling Inhibition Enables Long-Term Expansion of Diverse Epithelial Basal Cells.
PubMed Identifier: 27320041
author list: Mou H, Vinarsky V, Tata PR, Brazauskas K, Choi SH, Crooke AK, Zhang B, Solomon GM, Turner B, Bihler H, Harrington J, Lapey A, Channick C, Keyes C, Freund A, Artandi S, Mense M, Rowe S, Engelhardt JF, Hsu YC, Rajagopal J
published in: Cell stem cell
information resource reference: Dual SMAD Signaling Inhibition Enables Long-Term Expansion of Diverse Epithelial Basal Cells. Cell Stem Cell. 2016 08 04; 19(2):217-231.
journal title abbreviation: Cell Stem Cell
publication date: 2016-06-16T00:00:00
year: 2016
type: Academic Article
type: Article
type: Document
type: Information Resource

Authorship 529653
type: Authorship
author rank in publication: 16
linked author: Rajagopal, Jayaraj
linked information resource: Integrated cistromic and expression analysis of amplified NKX2-1 in lung adenocarcinoma identifies LMO3 as a functional transcriptional target.

Authorship 897337
type: Authorship
author rank in publication: 21
linked author: Rajagopal, Jayaraj
linked information resource: Dual SMAD Signaling Inhibition Enables Long-Term Expansion of Diverse Epithelial Basal Cells.

The Role of Wnt7b in Pulmonary Organogenesis
end date: 2009-11-30
principal investigator name: RAJAGOPAL, JAYARAJ
start date: 2004-12-15
type: Grant
sponsor award id: K08HL076393

Intercellular communication and cell regulation in airway epithelial ensembles in regeneration and disease
end date: 2022-08-31
principal investigator name: RAJAGOPAL, JAYARAJ
start date: 2014-02-01
type: Grant
sponsor award id: R01HL118185

Differentiating Nkx2.1-positive lung epithelial progenitors from ES cells
end date: 2014-03-31
principal investigator name: RAJAGOPAL, JAYARAJ
start date: 2012-04-01
type: Grant
sponsor award id: R21HL108055

Generation of lung progenitors from Cystic Fibrosis iPS cells
end date: 2014-03-31
principal investigator name: RAJAGOPAL, JAYARAJ
start date: 2012-04-01
type: Grant
sponsor award id: R21HL109786

Defining the role of Hippo signaling in airway injury repair and remodeling
end date: 2018-06-30
principal investigator name: RAJAGOPAL, JAYARAJ
start date: 2013-07-15
type: Grant
sponsor award id: R01HL116756

Principal Investigator
type: Researcher Role
researcher role of: Rajagopal, Jayaraj
contributes to: The Role of Wnt7b in Pulmonary Organogenesis

Principal Investigator
type: Researcher Role
researcher role of: Rajagopal, Jayaraj
contributes to: Intercellular communication and cell regulation in airway epithelial ensembles in regeneration and disease

Principal Investigator
type: Researcher Role
researcher role of: Rajagopal, Jayaraj
contributes to: Defining the role of Hippo signaling in airway injury repair and remodeling

Principal Investigator
type: Researcher Role
researcher role of: Rajagopal, Jayaraj
contributes to: Generation of lung progenitors from Cystic Fibrosis iPS cells

Principal Investigator
type: Researcher Role
researcher role of: Rajagopal, Jayaraj
contributes to: Differentiating Nkx2.1-positive lung epithelial progenitors from ES cells

Authorship 925897
type: Authorship
author rank in publication: 2
linked author: Rajagopal, Jayaraj
linked information resource: Cellular plasticity: 1712 to the present day.

Cellular plasticity: 1712 to the present day.
PubMed Identifier: 27485353
author list: Tata PR, Rajagopal J
published in: Current opinion in cell biology
information resource reference: Cellular plasticity: 1712 to the present day. Curr Opin Cell Biol. 2016 12; 43:46-54.
journal title abbreviation: Curr Opin Cell Biol
publication date: 2016-07-30T00:00:00
year: 2016
type: Academic Article
type: Article
type: Document
type: Information Resource

Authorship 939368
type: Authorship
author rank in publication: 2
linked author: Rajagopal, Jayaraj
linked information resource: Regulatory Circuits and Bi-directional Signaling between Stem Cells and Their Progeny.

Regulatory Circuits and Bi-directional Signaling between Stem Cells and Their Progeny.
PubMed Identifier: 27912089
author list: Tata PR, Rajagopal J
published in: Cell stem cell
information resource reference: Regulatory Circuits and Bi-directional Signaling between Stem Cells and Their Progeny. Cell Stem Cell. 2016 12 01; 19(6):686-689.
journal title abbreviation: Cell Stem Cell
publication date: 2016-12-01T00:00:00
year: 2016
type: Academic Article
type: Article
type: Document
type: Information Resource

ACTL6A Is Co-Amplified with p63 in Squamous Cell Carcinoma to Drive YAP Activation, Regenerative Proliferation, and Poor Prognosis.
PubMed Identifier: 28041841
author list: Saladi SV, Ross K, Karaayvaz M, Tata PR, Mou H, Rajagopal J, Ramaswamy S, Ellisen LW
published in: Cancer cell
information resource reference: ACTL6A Is Co-Amplified with p63 in Squamous Cell Carcinoma to Drive YAP Activation, Regenerative Proliferation, and Poor Prognosis. Cancer Cell. 2017 01 09; 31(1):35-49.
journal title abbreviation: Cancer Cell
publication date: 2016-12-29T00:00:00
year: 2016
type: Academic Article
type: Article
type: Document
type: Information Resource

Authorship 948219
type: Authorship
author rank in publication: 6
linked author: Rajagopal, Jayaraj
linked information resource: ACTL6A Is Co-Amplified with p63 in Squamous Cell Carcinoma to Drive YAP Activation, Regenerative Proliferation, and Poor Prognosis.

Authorship 962112
type: Authorship
author rank in publication: 15
linked author: Rajagopal, Jayaraj
linked information resource: SNAP23 Is Selectively Expressed in Airway Secretory Cells and Mediates Baseline and Stimulated Mucin Secretion.

SNAP23 Is Selectively Expressed in Airway Secretory Cells and Mediates Baseline and Stimulated Mucin Secretion.
PubMed Identifier: 25916184
author list: Ren B, Azzegagh Z, Jaramillo AM, Zhu Y, Pardo-Saganta A, Bagirzadeh R, Flores JR, Han W, Tang YJ, Tu J, Alanis DM, Evans CM, Guindani M, Roche PA, Rajagopal J, Chen J, Davis CW, Tuvim MJ, Dickey BF
published in: Bioscience reports
information resource reference: SNAP23 Is Selectively Expressed in Airway Secretory Cells and Mediates Baseline and Stimulated Mucin Secretion. Biosci Rep. 2015 Apr 28.
journal title abbreviation: Biosci Rep
publication date: 2015-04-28T00:00:00
year: 2015
type: Academic Article
type: Article
type: Document
type: Information Resource

Authorship 967008
type: Authorship
author rank in publication: 2
linked author: Rajagopal, Jayaraj
linked information resource: Plasticity in the lung: making and breaking cell identity.

Plasticity in the lung: making and breaking cell identity.
PubMed Identifier: 28246210
author list: Tata PR, Rajagopal J
published in: Development (Cambridge, England)
information resource reference: Plasticity in the lung: making and breaking cell identity. Development. 2017 03 01; 144(5):755-766.
journal title abbreviation: Development
publication date: 2017-03-01T00:00:00
year: 2017
type: Academic Article
type: Article
type: Document
type: Information Resource

185 Cambridge St
type: Address
address line 1: Massachusetts General Hospital
address line 2: Simches, 4-240
address line 3: 185 Cambridge St
city: Boston
postal code: 02114
state or province: MA

Insulin staining of ES cell progeny from insulin uptake.
PubMed Identifier: 12532008
author list: Rajagopal J, Anderson WJ, Kume S, Martinez OI, Melton DA
published in: Science (New York, N.Y.)
information resource reference: Insulin staining of ES cell progeny from insulin uptake. Science. 2003 Jan 17; 299(5605):363.
journal title abbreviation: Science
publication date: 2003-01-17T00:00:00
year: 2003
type: Academic Article
type: Article
type: Document
type: Information Resource

Is there more to lung development than steroids and surfactant?
PubMed Identifier: 11061782
author list: Rajagopal J, Kinane TB
published in: Pediatrics
information resource reference: Is there more to lung development than steroids and surfactant? Pediatrics. 2000 Nov; 106(5):1103-4.
journal title abbreviation: Pediatrics
publication date: 2000-11-01T00:00:00
year: 2000
type: Academic Article
type: Article
type: Document
type: Information Resource

Noncanonical Wnt signaling through G protein-linked PKCdelta activation promotes bone formation.
PubMed Identifier: 17199045
author list: Tu X, Joeng KS, Nakayama KI, Nakayama K, Rajagopal J, Carroll TJ, McMahon AP, Long F
published in: Developmental cell
information resource reference: Noncanonical Wnt signaling through G protein-linked PKCdelta activation promotes bone formation. Dev Cell. 2007 Jan; 12(1):113-27.
journal title abbreviation: Dev Cell
publication date: 2007-01-01T00:00:00
year: 2007
type: Academic Article
type: Article
type: Document
type: Information Resource

Sprouty-2 regulates oncogenic K-ras in lung development and tumorigenesis.
PubMed Identifier: 17369402
author list: Shaw AT, Meissner A, Dowdle JA, Crowley D, Magendantz M, Ouyang C, Parisi T, Rajagopal J, Blank LJ, Bronson RT, Stone JR, Tuveson DA, Jaenisch R, Jacks T
published in: Genes & development
information resource reference: Sprouty-2 regulates oncogenic K-ras in lung development and tumorigenesis. Genes Dev. 2007 Mar 15; 21(6):694-707.
journal title abbreviation: Genes Dev
publication date: 2007-03-15T00:00:00
year: 2007
type: Academic Article
type: Article
type: Document
type: Information Resource

Shah, Viral
eCommons Login: VSS8
first name: Viral
last name: Shah
full name: Viral Shailesh Shah, M.D., Ph.D.
has faculty rank: Assistant Professor
photo: https://connects.catalyst.harvard.edu/Profiles/profile/Modules/CustomViewPersonGeneralInfo/PhotoHandler.ashx
Person ID: 159120
person in primary position: Assistant Professor of Medicine
type: Agent
type: Person
preferred title: Assistant Professor of Medicine

Stereochemical course of catalysis by the Tetrahymena ribozyme.
PubMed Identifier: 2470151
author list: Rajagopal J, Doudna JA, Szostak JW
published in: Science (New York, N.Y.)
information resource reference: Stereochemical course of catalysis by the Tetrahymena ribozyme. Science. 1989 May 12; 244(4905):692-4.
journal title abbreviation: Science
publication date: 1989-05-12T00:00:00
year: 1989
type: Academic Article
type: Article
type: Document
type: Information Resource

Efficient derivation of purified lung and thyroid progenitors from embryonic stem cells.
PubMed Identifier: 22482505
author list: Longmire TA, Ikonomou L, Hawkins F, Christodoulou C, Cao Y, Jean JC, Kwok LW, Mou H, Rajagopal J, Shen SS, Dowton AA, Serra M, Weiss DJ, Green MD, Snoeck HW, Ramirez MI, Kotton DN
published in: Cell stem cell
information resource reference: Efficient derivation of purified lung and thyroid progenitors from embryonic stem cells. Cell Stem Cell. 2012 Apr 06; 10(4):398-411.
journal title abbreviation: Cell Stem Cell
publication date: 2012-04-06T00:00:00
year: 2012
type: Academic Article
type: Article
type: Document
type: Information Resource

Authorship 997890
type: Authorship
author rank in publication: 9
linked author: Rajagopal, Jayaraj
linked information resource: Delayed Alveolar Epithelialization: A Distinct Pathology in Diffuse Acute Lung Injury.

Delayed Alveolar Epithelialization: A Distinct Pathology in Diffuse Acute Lung Injury.
PubMed Identifier: 28696778
author list: Taylor MS, Chivukula RR, Myers LC, Jeck WR, Tata PR, O'Donnell WJ, Farver CF, Thompson BT, Rajagopal J, Kradin RL
published in: American journal of respiratory and critical care medicine
information resource reference: Delayed Alveolar Epithelialization: A Distinct Pathology in Diffuse Acute Lung Injury. Am J Respir Crit Care Med. 2018 02 15; 197(4):522-524.
journal title abbreviation: Am J Respir Crit Care Med
publication date: 2018-02-15T00:00:00
year: 2018
type: Academic Article
type: Article
type: Document
type: Information Resource

Genetic targeting of the endoderm with claudin-6CreER.
PubMed Identifier: 18213590
author list: Anderson WJ, Zhou Q, Alcalde V, Kaneko OF, Blank LJ, Sherwood RI, Guseh JS, Rajagopal J, Melton DA
published in: Developmental dynamics : an official publication of the American Association of Anatomists
information resource reference: Genetic targeting of the endoderm with claudin-6CreER. Dev Dyn. 2008 Feb; 237(2):504-12.
journal title abbreviation: Dev Dyn
publication date: 2008-02-01T00:00:00
year: 2008
type: Academic Article
type: Article
type: Document
type: Information Resource

Multifocal micronodular pneumocyte hyperplasia: computed tomographic appearance and follow-up in tuberous sclerosis complex.
PubMed Identifier: 22992599
author list: Muzykewicz DA, Black ME, Muse V, Numis AL, Rajagopal J, Thiele EA, Sharma A
published in: Journal of computer assisted tomography
information resource reference: Multifocal micronodular pneumocyte hyperplasia: computed tomographic appearance and follow-up in tuberous sclerosis complex. J Comput Assist Tomogr. 2012 Sep-Oct; 36(5):518-22.
journal title abbreviation: J Comput Assist Tomogr
publication date: 2012-09-01T00:00:00
year: 2012
type: Academic Article
type: Article
type: Document
type: Information Resource

Wnt7b stimulates embryonic lung growth by coordinately increasing the replication of epithelium and mesenchyme.
PubMed Identifier: 18367557
author list: Rajagopal J, Carroll TJ, Guseh JS, Bores SA, Blank LJ, Anderson WJ, Yu J, Zhou Q, McMahon AP, Melton DA
published in: Development (Cambridge, England)
information resource reference: Wnt7b stimulates embryonic lung growth by coordinately increasing the replication of epithelium and mesenchyme. Development. 2008 May; 135(9):1625-34.
journal title abbreviation: Development
publication date: 2008-03-26T00:00:00
year: 2008
type: Academic Article
type: Article
type: Document
type: Information Resource

Authorship 999759
type: Authorship
author rank in publication: 14
linked author: Rajagopal, Jayaraj
linked information resource: Development of a Primary Human Co-Culture Model of Inflamed Airway Mucosa.

Development of a Primary Human Co-Culture Model of Inflamed Airway Mucosa.
PubMed Identifier: 28811631
author list: Yonker LM, Mou H, Chu KK, Pazos MA, Leung H, Cui D, Ryu J, Hibbler RM, Eaton AD, Ford TN, Falck JR, Kinane TB, Tearney GJ, Rajagopal J, Hurley BP
published in: Scientific reports
information resource reference: Development of a Primary Human Co-Culture Model of Inflamed Airway Mucosa. Sci Rep. 2017 08 15; 7(1):8182.
journal title abbreviation: Sci Rep
publication date: 2017-08-15T00:00:00
year: 2017
type: Academic Article
type: Article
type: Document
type: Information Resource

Authorship 1005104
type: Authorship
author rank in publication: 2
linked author: Rajagopal, Jayaraj
linked information resource: Tips from the embryonic lung.

Tips from the embryonic lung.
PubMed Identifier: 28806170
author list: Waghray A, Rajagopal J
published in: eLife
information resource reference: Tips from the embryonic lung. Elife. 2017 08 14; 6.
journal title abbreviation: Elife
publication date: 2017-08-14T00:00:00
year: 2017
type: Academic Article
type: Article
type: Document
type: Information Resource

Authorship 1010824
type: Authorship
author rank in publication: 9
linked author: Rajagopal, Jayaraj
linked information resource: Neutrophil-Derived Cytosolic PLA2a Contributes to Bacterial-Induced Neutrophil Transepithelial Migration.

Neutrophil-Derived Cytosolic PLA2a Contributes to Bacterial-Induced Neutrophil Transepithelial Migration.
PubMed Identifier: 28887431
author list: Yonker LM, Pazos MA, Lanter BB, Mou H, Chu KK, Eaton AD, Bonventre JV, Tearney GJ, Rajagopal J, Hurley BP
published in: Journal of immunology (Baltimore, Md. : 1950)
information resource reference: Neutrophil-Derived Cytosolic PLA2a Contributes to Bacterial-Induced Neutrophil Transepithelial Migration. J Immunol. 2017 10 15; 199(8):2873-2884.
journal title abbreviation: J Immunol
publication date: 2017-09-08T00:00:00
year: 2017
type: Academic Article
type: Article
type: Document
type: Information Resource

Integrated cistromic and expression analysis of amplified NKX2-1 in lung adenocarcinoma identifies LMO3 as a functional transcriptional target.
PubMed Identifier: 23322301
author list: Watanabe H, Francis JM, Woo MS, Etemad B, Lin W, Fries DF, Peng S, Snyder EL, Tata PR, Izzo F, Schinzel AC, Cho J, Hammerman PS, Verhaak RG, Hahn WC, Rajagopal J, Jacks T, Meyerson M
published in: Genes & development
information resource reference: Integrated cistromic and expression analysis of amplified NKX2-1 in lung adenocarcinoma identifies LMO3 as a functional transcriptional target. Genes Dev. 2013 Jan 15; 27(2):197-210.
journal title abbreviation: Genes Dev
publication date: 2013-01-15T00:00:00
year: 2013
type: Academic Article
type: Article
type: Document
type: Information Resource

A multipotent progenitor domain guides pancreatic organogenesis.
PubMed Identifier: 17609113
author list: Zhou Q, Law AC, Rajagopal J, Anderson WJ, Gray PA, Melton DA
published in: Developmental cell
information resource reference: A multipotent progenitor domain guides pancreatic organogenesis. Dev Cell. 2007 Jul; 13(1):103-14.
journal title abbreviation: Dev Cell
publication date: 2007-07-01T00:00:00
year: 2007
type: Academic Article
type: Article
type: Document
type: Information Resource

Generation of multipotent lung and airway progenitors from mouse ESCs and patient-specific cystic fibrosis iPSCs.
PubMed Identifier: 22482504
author list: Mou H, Zhao R, Sherwood R, Ahfeldt T, Lapey A, Wain J, Sicilian L, Izvolsky K, Musunuru K, Cowan C, Rajagopal J
published in: Cell stem cell
information resource reference: Generation of multipotent lung and airway progenitors from mouse ESCs and patient-specific cystic fibrosis iPSCs. Cell Stem Cell. 2012 Apr 06; 10(4):385-97.
journal title abbreviation: Cell Stem Cell
publication date: 2012-04-06T00:00:00
year: 2012
type: Academic Article
type: Article
type: Document
type: Information Resource

Canonical Wnt signaling regulates organ-specific assembly and differentiation of CNS vasculature.
PubMed Identifier: 19023080
author list: Stenman JM, Rajagopal J, Carroll TJ, Ishibashi M, McMahon J, McMahon AP
published in: Science (New York, N.Y.)
information resource reference: Canonical Wnt signaling regulates organ-specific assembly and differentiation of CNS vasculature. Science. 2008 Nov 21; 322(5905):1247-50.
journal title abbreviation: Science
publication date: 2008-11-21T00:00:00
year: 2008
type: Academic Article
type: Article
type: Document
type: Information Resource

In vivo imaging of tracheal epithelial cells in mice during airway regeneration.
PubMed Identifier: 22984086
author list: Kim JK, Vinarsky V, Wain J, Zhao R, Jung K, Choi J, Lam A, Pardo-Saganta A, Breton S, Rajagopal J, Yun SH
published in: American journal of respiratory cell and molecular biology
information resource reference: In vivo imaging of tracheal epithelial cells in mice during airway regeneration. Am J Respir Cell Mol Biol. 2012 Dec; 47(6):864-8.
journal title abbreviation: Am J Respir Cell Mol Biol
publication date: 2012-09-13T00:00:00
year: 2012
type: Academic Article
type: Article
type: Document
type: Information Resource

A Conserved Distal Lung Regenerative Pathway in Acute Lung Injury.
PubMed Identifier: 29476724
author list: Taylor MS, Chivukula RR, Myers LC, Jeck WR, Waghray A, Tata PR, Selig MK, O'Donnell WJ, Farver CF, Thompson BT, Rajagopal J, Kradin RL
published in: The American journal of pathology
information resource reference: A Conserved Distal Lung Regenerative Pathway in Acute Lung Injury. Am J Pathol. 2018 05; 188(5):1149-1160.
journal title abbreviation: Am J Pathol
publication date: 2018-02-21T00:00:00
year: 2018
type: Academic Article
type: Article
type: Document
type: Information Resource