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Sriram Sankararaman, PH.D.

TitleResearch Fellow in Genetics (INT)
InstitutionHarvard Medical School
DepartmentGenetics
AddressHarvard Medical School
Dept of Genetics
77 Avenue Louis Pasteur
Boston MA 02115

 Bibliographic 
 selected publications
Publications listed below are automatically derived from MEDLINE/PubMed and other sources, which might result in incorrect or missing publications. Faculty can login to make corrections and additions.
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  1. Prüfer K, Racimo F, Patterson N, Jay F, Sankararaman S, Sawyer S, Heinze A, Renaud G, Sudmant PH, de Filippo C, Li H, Mallick S, Dannemann M, Fu Q, Kircher M, Kuhlwilm M, Lachmann M, Meyer M, Ongyerth M, Siebauer M, Theunert C, Tandon A, Moorjani P, Pickrell J, Mullikin JC, Vohr SH, Green RE, Hellmann I, Johnson PL, Blanche H, Cann H, Kitzman JO, Shendure J, Eichler EE, Lein ES, Bakken TE, Golovanova LV, Doronichev VB, Shunkov MV, Derevianko AP, Viola B, Slatkin M, Reich D, Kelso J, Pääbo S. The complete genome sequence of a Neanderthal from the Altai Mountains. Nature. 2014 Jan 2; 505(7481):43-9.
    View in: PubMed
  2. Bhatia G, Patterson N, Sankararaman S, Price AL. Estimating and interpreting FST: The impact of rare variants. Genome Res. 2013 Sep; 23(9):1514-21.
    View in: PubMed
  3. Pasaniuc B, Sankararaman S, Torgerson DG, Gignoux C, Zaitlen N, Eng C, Rodriguez-Cintron W, Chapela R, Ford JG, Avila PC, Rodriguez-Santana J, Chen GK, Le Marchand L, Henderson B, Reich D, Haiman CA, Gonzàlez Burchard E, Halperin E. Analysis of Latino populations from GALA and MEC studies reveals genomic loci with biased local ancestry estimation. Bioinformatics. 2013 Jun 1; 29(11):1407-15.
    View in: PubMed
  4. Sankararaman S, Patterson N, Li H, Pääbo S, Reich D. The Date of Interbreeding between Neandertals and Modern Humans. PLoS Genet. 2012 Oct; 8(10):e1002947.
    View in: PubMed
  5. Turchin MC, Chiang CW, Palmer CD, Sankararaman S, Reich D, Hirschhorn JN. Evidence of widespread selection on standing variation in Europe at height-associated SNPs. Nat Genet. 2012 Sep; 44(9):1015-9.
    View in: PubMed
  6. Baran Y, Pasaniuc B, Sankararaman S, Torgerson DG, Gignoux C, Eng C, Rodriguez-Cintron W, Chapela R, Ford JG, Avila PC, Rodriguez-Santana J, Burchard EG, Halperin E. Fast and accurate inference of local ancestry in Latino populations. Bioinformatics. 2012 May 15; 28(10):1359-67.
    View in: PubMed
  7. Bouchard-Côté A, Sankararaman S, Jordan MI. Phylogenetic inference via sequential Monte Carlo. Syst Biol. 2012 Jul; 61(4):579-93.
    View in: PubMed
  8. Hodgkinson CA, Enoch MA, Srivastava V, Cummins-Oman JS, Ferrier C, Iarikova P, Sankararaman S, Yamini G, Yuan Q, Zhou Z, Albaugh B, White KV, Shen PH, Goldman D. Genome-wide association identifies candidate genes that influence the human electroencephalogram. Proc Natl Acad Sci U S A. 2010 May 11; 107(19):8695-700.
    View in: PubMed
  9. Sankararaman S, Sha F, Kirsch JF, Jordan MI, Sjölander K. Active site prediction using evolutionary and structural information. Bioinformatics. 2010 Mar 1; 26(5):617-24.
    View in: PubMed
  10. Sankararaman S, Obozinski G, Jordan MI, Halperin E. Genomic privacy and limits of individual detection in a pool. Nat Genet. 2009 Sep; 41(9):965-7.
    View in: PubMed
  11. Alterovitz R, Arvey A, Sankararaman S, Dallett C, Freund Y, Sjölander K. ResBoost: characterizing and predicting catalytic residues in enzymes. BMC Bioinformatics. 2009; 10:197.
    View in: PubMed
  12. Pasaniuc B, Sankararaman S, Kimmel G, Halperin E. Inference of locus-specific ancestry in closely related populations. Bioinformatics. 2009 Jun 15; 25(12):i213-21.
    View in: PubMed
  13. Sankararaman S, Kolaczkowski B, Sjölander K. INTREPID: a web server for prediction of functionally important residues by evolutionary analysis. Nucleic Acids Res. 2009 Jul; 37(Web Server issue):W390-5.
    View in: PubMed
  14. Sankararaman S, Sjölander K. INTREPID--INformation-theoretic TREe traversal for Protein functional site IDentification. Bioinformatics. 2008 Nov 1; 24(21):2445-52.
    View in: PubMed
  15. Skibola CF, Bracci PM, Halperin E, Nieters A, Hubbard A, Paynter RA, Skibola DR, Agana L, Becker N, Tressler P, Forrest MS, Sankararaman S, Conde L, Holly EA, Smith MT. Polymorphisms in the estrogen receptor 1 and vitamin C and matrix metalloproteinase gene families are associated with susceptibility to lymphoma. PLoS One. 2008; 3(7):e2816.
    View in: PubMed
  16. Sankararaman S, Kimmel G, Halperin E, Jordan MI. On the inference of ancestries in admixed populations. Genome Res. 2008 Apr; 18(4):668-75.
    View in: PubMed
  17. Sankararaman S, Sridhar S, Kimmel G, Halperin E. Estimating local ancestry in admixed populations. Am J Hum Genet. 2008 Feb; 82(2):290-303.
    View in: PubMed
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